Pregenerated sensors for FAM171A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034685Ensembl transcript IDs: ENSMUST00000049057.5
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCCAGGGTCCCTTCCCAAGACACTCCCCCAGCACATACCACAGATaGGCTCTGCCGACCCCTGAGCTCTTCTCCGGGATAAGAGCGCAT | + |
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Preference number: 1 (lower is better) Translates to: IQGPFPRHSPSTYHR*ALPTPELFSGIRAH Trigger: ATGCGCTCTTATCCCGGAGAAGAGCTCAGGGGTCGGCAGAGCTCATCTGTGGTATGTGCTGGGGGAGTGTCTTGGGAAGGGACCCTGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| 3UTR-3UTR CCA 90 bp | GGCTCGCCCCTCCTGCTCTCCCACAATAGATCTTTCTATGTACAGCCACGTTTACCGGGGCGCGCACTCTaGGAACCTGCAGGGGCGGTG | + |
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Preference number: 2 (lower is better) Translates to: GSPLLLSHNRSFYVQPRLPGRAL*EPAGAV Trigger: CACCGCCCCTGCAGGTTCCCAGAGTGCGCGCCCCGG...TAAACGTGGCTGTACATAGAAAGATCTATTGTGGGAGAGCAGGAGGGGCGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| 3UTR-3UTR TCA 90 bp | GTTTGGAGGCCAATCCAGGGTCCCTTCCCAAGACACTCCCCCAGCACATACCACAGCTCTGCCGACCCCTaGGCTCTTCTCCGGGATAAG | + |
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Preference number: 2 (lower is better) Translates to: VWRPIQGPFPRHSPSTYHSSADP*ALLRDK Trigger: CTTATCCCGGAGAAGAGCTCAGGGGTCGGCAGAGCT...GTGGTATGTGCTGGGGGAGTGTCTTGGGAAGGGACCCTGGATTGGCCTCCAAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| 3UTR-3UTR CAA 90 bp | CTCACCCTAGCAGCTGAGGCTGGCTCGCCCCTCCTGCTCTCCCACAATAGATCTCCCACCTCCCTCTGTTaGGAGGCCAATCCAGGGTCC | + |
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Preference number: 3 (lower is better) Translates to: LTLAAEAGSPLLLSHNRSPTSLC*EANPGS Trigger: GGACCCTGGATTGGCCTCCAAACAGAGGGAGGTGGG...AGATCTATTGTGGGAGAGCAGGAGGGGCGAGCCAGCCTCAGCTGCTAGGGTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| 3UTR TCA 72 bp | CCCTTCCCAAGACACTCCCCCAGCACATACCACAGATaGGCTCTGCCGACCCCTGAGCTCTTCTCCGGGATA | + |
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Preference number: 3 (lower is better) Translates to: PFPRHSPSTYHR*ALPTPELFSGI Trigger: TATCCCGGAGAAGAGCTCAGGGGTCGGCAGAGCTCATCTGTGGTATGTGCTGGGGGAGTGTCTTGGGAAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CCA 90 bp | CTCCAGGATCGCCCCAGCCACCAGCCCTGTGACATCCAAGCAGCACCCCTCCCCCGCCTGAGTCCAGGCTaGCATCGGTGCTGCGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LQDRPSHQPCDIQAAPLPRLSPG*HRCCGR Trigger: GCGGCCGCAGCACCGATGCCAGCCTGGACTCAGGCG...GGGGAGGGGTGCTGCTTGGATGTCACAGGGCTGGTGGCTGGGGCGATCCTGGAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR GCA 90 bp | CCCCTCCCATGGGGGACCGGGTCCCTCCCACCTCCCTCTGTTTGGAGGCCAATCCGCTCCTCCCGCCGCTaGCACGGGCTCTTCTTGTCG | + |
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Preference number: 4 (lower is better) Translates to: PLPWGTGSLPPPSVWRPIRSSRR*HGLFLS Trigger: CGACAAGAAGAGCCCGTGGCAGCGGCGGGAGGAGCG...GATTGGCCTCCAAACAGAGGGAGGTGGGAGGGACCCGGTCCCCCATGGGAGGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CCA 90 bp | CCCCTCCCATGGGGGACCGGGTCCCTCCCACCTCCCTCTGTTTGGAGGCCAATCGGCGGCCGCGCCAGCTaGTCTACCGACTGTGACAGC | + |
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Preference number: 4 (lower is better) Translates to: PLPWGTGSLPPPSVWRPIGGRAS*STDCDS Trigger: GCTGTCACAGTCGGTAGACCAGCTGGCGCGGCCGCC...GATTGGCCTCCAAACAGAGGGAGGTGGGAGGGACCCGGTCCCCCATGGGAGGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR TCA 90 bp | TGGGGGACCGGGTCCCTCCCACCTCCCTCTGTTTGGAGGCCAATCCAGGGTCCCCCTGCAGCTCGCCGTTaGGCTGCGCCATGGTGGACT | + |
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Preference number: 4 (lower is better) Translates to: WGTGSLPPPSVWRPIQGPPAARR*AAPWWT Trigger: AGTCCACCATGGCGCAGCTCAACGGCGAGCTGCAGG...GGGACCCTGGATTGGCCTCCAAACAGAGGGAGGTGGGAGGGACCCGGTCCCCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR TCA 90 bp | CCCCTCCCATGGGGGACCGGGTCCCTCCCACCTCCCTCTGTTTGGAGGCCAATCAACCAGGCGCGCGGGTaGGGCTTCACTCCCAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: PLPWGTGSLPPPSVWRPINQARG*GFTPSS Trigger: GGAACTGGGAGTGAAGCCTCACCCGCGCGCCTGGTT...GATTGGCCTCCAAACAGAGGGAGGTGGGAGGGACCCGGTCCCCCATGGGAGGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR GCA 90 bp | GCCCTCACCCTAGCAGCTGAGGCTGGCTCGCCCCTCCTGCTCTCCCACAATAGACCTGGGTACCGTGGCTaGCCGGCCTTCGGGTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: ALTLAAEAGSPLLLSHNRPGYRG*PAFGCH Trigger: GTGGCACCCGAAGGCCGGGCAGCCACGGTACCCAGG...TCTATTGTGGGAGAGCAGGAGGGGCGAGCCAGCCTCAGCTGCTAGGGTGAGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CCA 90 bp | CCCCTCCCATGGGGGACCGGGTCCCTCCCACCTCCCTCTGTTTGGAGGCCAATCGGTATTCGTCCAGGCTaGGCTCCAGCCCGCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: PLPWGTGSLPPPSVWRPIGIRPG*APARQD Trigger: GTCCTGGCGGGCTGGAGCCCAGCCTGGACGAATACC...GATTGGCCTCCAAACAGAGGGAGGTGGGAGGGACCCGGTCCCCCATGGGAGGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR TCA 90 bp | CTCACCCTAGCAGCTGAGGCTGGCTCGCCCCTCCTGCTCTCCCACAATAGATCTGCTCTGTGTCTTCGCTaGGCGCCAGGCGCGGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: LTLAAEAGSPLLLSHNRSALCLR*APGAGA Trigger: CGCCCCCGCGCCTGGCGCTCAGCGAAGACACAGAGC...AGATCTATTGTGGGAGAGCAGGAGGGGCGAGCCAGCCTCAGCTGCTAGGGTGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR GCA 90 bp | GCCCCTCCCATGGGGGACCGGGTCCCTCCCACCTCCCTCTGTTTGGAGGCCAATGAGGGGCCGGAGAGCTaGAGCTTGCGGTGCTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: APPMGDRVPPTSLCLEANEGPES*SLRCCC Trigger: ACAACAGCACCGCAAGCTGCAGCTCTCCGGCCCCTC...ATTGGCCTCCAAACAGAGGGAGGTGGGAGGGACCCGGTCCCCCATGGGAGGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR GCA 90 bp | TGGGGGACCGGGTCCCTCCCACCTCCCTCTGTTTGGAGGCCAATCCAGGGTCCCGAAAGTCGGGGGTCTTaGTCTCGGCCGCCCCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: WGTGSLPPPSVWRPIQGPESRGS*SRPPPC Trigger: ACAAGGGGGCGGCCGAGAGCAAGACCCCCGACTTTC...GGGACCCTGGATTGGCCTCCAAACAGAGGGAGGTGGGAGGGACCCGGTCCCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR GCA 90 bp | CACCAGCCCTGTGACATCCAAGCAGCACCCCTCCCCTCCCAAGGGTCCACAGAGGCTCACTGGCGCTGCTaGGGGAACTGTCCCCACGGC | + |
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Preference number: 4 (lower is better) Translates to: HQPCDIQAAPLPSQGSTEAHWRC*GNCPHG Trigger: GCCGTGGGGACAGTTCCCGCAGCAGCGCCAGTGAGC...CTCTGTGGACCCTTGGGAGGGGAGGGGTGCTGCTTGGATGTCACAGGGCTGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CCA 90 bp | CCCACCTCCCTCTGTTTGGAGGCCAATCCAGGGTCCCTTCCCAAGACACTCCCCATGAGCTGGCCCGGTTaGCTGAGGGACGGCGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: PTSLCLEANPGSLPKTLPMSWPG*LRDGGR Trigger: GCGGCCGCCGTCCCTCAGCCAACCGGGCCAGCTCAT...GGGGAGTGTCTTGGGAAGGGACCCTGGATTGGCCTCCAAACAGAGGGAGGTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR TCA 90 bp | AGCCCTGTGACATCCAAGCAGCACCCCTCCCCTCCCAAGGGTCCACAGAGATTGCGTCCTCCGGGCTGGTaGGCGAATCGCGCCGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SPVTSKQHPSPPKGPQRLRPPGW*ANRAAA Trigger: AGCTGCGGCGCGATTCGCTCACCAGCCCGGAGGACG...CAATCTCTGTGGACCCTTGGGAGGGGAGGGGTGCTGCTTGGATGTCACAGGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR GCA 90 bp | CTCACCCTAGCAGCTGAGGCTGGCTCGCCCCTCCTGCTCTCCCACAATAGATCTGCGAGCAGAGGCCGGTaGGGCTCTCGCTGCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LTLAAEAGSPLLLSHNRSASRGR*GSRCCW Trigger: CCAGCAGCAGCGAGAGCCGCACCGGCCTCTGCTCGC...AGATCTATTGTGGGAGAGCAGGAGGGGCGAGCCAGCCTCAGCTGCTAGGGTGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR GCA 90 bp | CCTCCCTCTGTTTGGAGGCCAATCCAGGGTCCCTTCCCAAGACACTCCCCCAGCTGCCCGGCCTTCGGGTaGCACCACCTCGTCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PPSVWRPIQGPFPRHSPSCPAFG*HHLVQQ Trigger: CTGCTGGACGAGGTGGTGGCACCCGAAGGCCGGGCA...GCTGGGGGAGTGTCTTGGGAAGGGACCCTGGATTGGCCTCCAAACAGAGGGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CCA 90 bp | CCTTCCCAAGACACTCCCCCAGCACATACCACAGATGAGCTCTGCCGACCCCTGGGATCTCCTGCGGGCTaGGGGGCTCCGGCGGAGACT | + |
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Preference number: 4 (lower is better) Translates to: PSQDTPPAHTTDELCRPLGSPAG*GAPAET Trigger: AGTCTCCGCCGGAGCCCCCCAGCCCGCAGGAGATCC...CAGGGGTCGGCAGAGCTCATCTGTGGTATGTGCTGGGGGAGTGTCTTGGGAAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CCA 90 bp | CACCAGCCCTGTGACATCCAAGCAGCACCCCTCCCCTCCCAAGGGTCCACAGAGGCCCGCATTTCCTGCTaGGTGCTGGCCGGTGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: HQPCDIQAAPLPSQGSTEARISC*VLAGVS Trigger: GCTCACACCGGCCAGCACCCAGCAGGAAATGCGGGC...CTCTGTGGACCCTTGGGAGGGGAGGGGTGCTGCTTGGATGTCACAGGGCTGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CCA 90 bp | GCCCCTCCCATGGGGGACCGGGTCCCTCCCACCTCCCTCTGTTTGGAGGCCAATATAATGGTCGAAGGATaGCGGCGGCGAGGGAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: APPMGDRVPPTSLCLEANIMVEG*RRRGRL Trigger: GAGCCTCCCTCGCCGCCGCCATCCTTCGACCATTAT...ATTGGCCTCCAAACAGAGGGAGGTGGGAGGGACCCGGTCCCCCATGGGAGGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| 3UTR CAA 72 bp | CCCATGGGGGACCGGGTCCCTCCCACCTCCCTCTGTTaGGAGGCCAATCCAGGGTCCCTTCCCAAGACACTC | + |
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Preference number: 4 (lower is better) Translates to: PMGDRVPPTSLC*EANPGSLPKTL Trigger: GAGTGTCTTGGGAAGGGACCCTGGATTGGCCTCCAAACAGAGGGAGGTGGGAGGGACCCGGTCCCCCATGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR TCA 90 bp | GTCCCTTCCCAAGACACTCCCCCAGCACATACCACAGATGAGCTCTGCCGACCCCCAGGAGCCATTGCCTaGGCTGGAGGCCTCGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: VPSQDTPPAHTTDELCRPPGAIA*AGGLGP Trigger: GGGACCGAGGCCTCCAGCTCAGGCAATGGCTCCTGG...GGGTCGGCAGAGCTCATCTGTGGTATGTGCTGGGGGAGTGTCTTGGGAAGGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR TCA 90 bp | GCCCCTCCCATGGGGGACCGGGTCCCTCCCACCTCCCTCTGTTTGGAGGCCAATCTGGTCTACCGACTGTaGCAGCAGAAAGTCGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: APPMGDRVPPTSLCLEANLVYRL*QQKVGG Trigger: ACCCCCGACTTTCTGCTGTCACAGTCGGTAGACCAG...ATTGGCCTCCAAACAGAGGGAGGTGGGAGGGACCCGGTCCCCCATGGGAGGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR GCA 90 bp | CCCACCTCCCTCTGTTTGGAGGCCAATCCAGGGTCCCTTCCCAAGACACTCCCCCCAGCCAGGAGCCATTaGCTGAGCTGGAGGCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: PTSLCLEANPGSLPKTLPPARSH*LSWRPR Trigger: CCGAGGCCTCCAGCTCAGGCAATGGCTCCTGGCTGG...GGGGAGTGTCTTGGGAAGGGACCCTGGATTGGCCTCCAAACAGAGGGAGGTGGG 64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR GCA 90 bp | TGGGGGACCGGGTCCCTCCCACCTCCCTCTGTTTGGAGGCCAATCCAGGGTCCCTTCTCGGTTAGAGCCTaGAGCTCGCCGTTGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: WGTGSLPPPSVWRPIQGPFSVRA*SSPLSC Trigger: GCAGCTCAACGGCGAGCTGCAGGCTCTAACCGAGAA...GGGACCCTGGATTGGCCTCCAAACAGAGGGAGGTGGGAGGGACCCGGTCCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR TCA 90 bp | CCTTCCCAAGACACTCCCCCAGCACATACCACAGATGAGCTCTGCCGACCCCTGCCCAAAGACGTCTACTaGGGCCCTGGCCAGGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: PSQDTPPAHTTDELCRPLPKDVY*GPGQGH Trigger: GTGCCCCTGGCCAGGGCCTCAGTAGACGTCTTTGGG...CAGGGGTCGGCAGAGCTCATCTGTGGTATGTGCTGGGGGAGTGTCTTGGGAAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR GCA 90 bp | CCCCTCCCATGGGGGACCGGGTCCCTCCCACCTCCCTCTGTTTGGAGGCCAATCACCCAGTACCCTAGCTaGGGGGAGACAAAAGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PLPWGTGSLPPPSVWRPITQYPS*GETKVQ Trigger: CTGGACTTTTGTCTCCCCGCAGCTAGGGTACTGGGT...GATTGGCCTCCAAACAGAGGGAGGTGGGAGGGACCCGGTCCCCCATGGGAGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR GCA 90 bp | CCCACCTCCCTCTGTTTGGAGGCCAATCCAGGGTCCCTTCCCAAGACACTCCCCCAGGCGCACATAGTGTaGGGGGATCACCAGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PTSLCLEANPGSLPKTLPQAHIV*GDHQGG Trigger: CCCACCCTGGTGATCCCCGCACACTATGTGCGCCTG...GGGGAGTGTCTTGGGAAGGGACCCTGGATTGGCCTCCAAACAGAGGGAGGTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CCA 90 bp | GTTTGGAGGCCAATCCAGGGTCCCTTCCCAAGACACTCCCCCAGCACATACCACCGTCTACTGAGGCCCTaGCCAGGGGCACCAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: VWRPIQGPFPRHSPSTYHRLLRP*PGAPAP Trigger: GGGAGCTGGTGCCCCTGGCCAGGGCCTCAGTAGACG...GTGGTATGTGCTGGGGGAGTGTCTTGGGAAGGGACCCTGGATTGGCCTCCAAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CCA 90 bp | TGGGGGACCGGGTCCCTCCCACCTCCCTCTGTTTGGAGGCCAATCCAGGGTCCCTTGCCTGTTAGCAGGTaGACGCTCACAGCAGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: WGTGSLPPPSVWRPIQGPLPVSR*TLTAAS Trigger: ACTGGCTGCTGTGAGCGTCCACCTGCTAACAGGCAA...GGGACCCTGGATTGGCCTCCAAACAGAGGGAGGTGGGAGGGACCCGGTCCCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CCA 90 bp | GGGGACCGGGTCCCTCCCACCTCCCTCTGTTTGGAGGCCAATCCAGGGTCCCTTCTAAGTCTCGGGAGCTaGAGAAGGCCGAGTGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: GDRVPPTSLCLEANPGSLLSLGS*RRPSVG Trigger: CCCTACACTCGGCCTTCTCCAGCTCCCGAGACTTAG...AAGGGACCCTGGATTGGCCTCCAAACAGAGGGAGGTGGGAGGGACCCGGTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CCA 90 bp | CAGCTGAGGCTGGCTCGCCCCTCCTGCTCTCCCACAATAGATCTTTCTATGTACAGCCCTCCGGCGGGGTaGCTTCGTCGCCCACTCCCG | + |
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Preference number: 4 (lower is better) Translates to: QLRLARPSCSPTIDLSMYSPPAG*LRRPLP Trigger: CGGGAGTGGGCGACGAAGCCACCCCGCCGGAGGGCT...GTACATAGAAAGATCTATTGTGGGAGAGCAGGAGGGGCGAGCCAGCCTCAGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CCA 90 bp | AGGGTCCCTTCCCAAGACACTCCCCCAGCACATACCACAGATGAGCTCTGCCGACGCGCCGCAGCTCACTaGCGCTGCTGCGGGAACTGT | + |
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Preference number: 4 (lower is better) Translates to: RVPSQDTPPAHTTDELCRRAAAH*RCCGNC Trigger: ACAGTTCCCGCAGCAGCGCCAGTGAGCTGCGGCGCG...TCGGCAGAGCTCATCTGTGGTATGTGCTGGGGGAGTGTCTTGGGAAGGGACCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR TCA 90 bp | GTTTGGAGGCCAATCCAGGGTCCCTTCCCAAGACACTCCCCCAGCACATACCACAGGGCACTGAGTTGGTaGGGAAACCGGGGCGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: VWRPIQGPFPRHSPSTYHRALSW*GNRGGQ Trigger: CTGCCCGCCCCGGTTTCCTCACCAACTCAGTGCCCT...GTGGTATGTGCTGGGGGAGTGTCTTGGGAAGGGACCCTGGATTGGCCTCCAAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR TCA 90 bp | AGCCCTGTGACATCCAAGCAGCACCCCTCCCCTCCCAAGGGTCCACAGAGATTGCAGGTGAATGGGGCCTaGGAGAGGCACCTCTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: SPVTSKQHPSPPKGPQRLQVNGA*ERHLCP Trigger: GGGACAGAGGTGCCTCTCTCAGGCCCCATTCACCTG...CAATCTCTGTGGACCCTTGGGAGGGGAGGGGTGCTGCTTGGATGTCACAGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR GCA 90 bp | GCAGCTGAGGCTGGCTCGCCCCTCCTGCTCTCCCACAATAGATCTTTCTATGTATGCTGCGGCCGCCGCTaGCCGCCTGCAGGTCGATGT | + |
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Preference number: 4 (lower is better) Translates to: AAEAGSPLLLSHNRSFYVCCGRR*PPAGRC Trigger: ACATCGACCTGCAGGCGGGCAGCGGCGGCCGCAGCA...TACATAGAAAGATCTATTGTGGGAGAGCAGGAGGGGCGAGCCAGCCTCAGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CCA 90 bp | CCCACCTCCCTCTGTTTGGAGGCCAATCCAGGGTCCCTTCCCAAGACACTCCCCTGGCGGAGCGCGGTTTaGCACGGAAGAAGTCATCCC | + |
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Preference number: 4 (lower is better) Translates to: PTSLCLEANPGSLPKTLPWRSAV*HGRSHP Trigger: GGGATGACTTCTTCCGTGCCAAACCGCGCTCCGCCA...GGGGAGTGTCTTGGGAAGGGACCCTGGATTGGCCTCCAAACAGAGGGAGGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR TCA 90 bp | CAGCTGAGGCTGGCTCGCCCCTCCTGCTCTCCCACAATAGATCTTTCTATGTACCGGGGCGGGCAGCAGTaGCCAAGACCCAGGTACCCA | + |
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Preference number: 4 (lower is better) Translates to: QLRLARPSCSPTIDLSMYRGGQQ*PRPRYP Trigger: TGGGTACCTGGGTCTTGGTCACTGCTGCCCGCCCCG...GTACATAGAAAGATCTATTGTGGGAGAGCAGGAGGGGCGAGCCAGCCTCAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR TCA 90 bp | GTCCCTTCCCAAGACACTCCCCCAGCACATACCACAGATGAGCTCTGCCGACCCAACACGCCAGGGCACTaGGTTGGTGAGGAAACCGGG | + |
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Preference number: 4 (lower is better) Translates to: VPSQDTPPAHTTDELCRPNTPGH*VGEETG Trigger: CCCGGTTTCCTCACCAACTCAGTGCCCTGGCGTGTT...GGGTCGGCAGAGCTCATCTGTGGTATGTGCTGGGGGAGTGTCTTGGGAAGGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR TCA 90 bp | GTCCCTTCCCAAGACACTCCCCCAGCACATACCACAGATGAGCTCTGCCGACCCGGTCCTCATAGAGGATaGGGGTGGCTGGCCTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: VPSQDTPPAHTTDELCRPGPHRG*GWLASL Trigger: CAGAGAGGCCAGCCACCCTCATCCTCTATGAGGACC...GGGTCGGCAGAGCTCATCTGTGGTATGTGCTGGGGGAGTGTCTTGGGAAGGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR TCA 90 bp | ACTCCCCCAGCACATACCACAGATGAGCTCTGCCGACCCCTGAGCTCTTCTCCGGTAGACACAGCAGAATaGGCACCAGCAGCGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: TPPAHTTDELCRPLSSSPVDTAE*APAAPG Trigger: CCCTGGCGCTGCTGGTGCTCATTCTGCTGTGTCTAC...CGGAGAAGAGCTCAGGGGTCGGCAGAGCTCATCTGTGGTATGTGCTGGGGGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR GCA 90 bp | AGGGTCCCTTCCCAAGACACTCCCCCAGCACATACCACAGATGAGCTCTGCCGATGCGGCTCTCGCTGCTaGTGGGCTCTGTGTCTTCGC | + |
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Preference number: 4 (lower is better) Translates to: RVPSQDTPPAHTTDELCRCGSRC*WALCLR Trigger: GCGAAGACACAGAGCCCAGCAGCAGCGAGAGCCGCA...TCGGCAGAGCTCATCTGTGGTATGTGCTGGGGGAGTGTCTTGGGAAGGGACCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CCA 90 bp | GTTTGGAGGCCAATCCAGGGTCCCTTCCCAAGACACTCCCCCAGCACATACCACAGCCATTGCCTGAGCTaGAGGCCTCGGTCCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: VWRPIQGPFPRHSPSTYHSHCLS*RPRSPG Trigger: TCCTGGGGACCGAGGCCTCCAGCTCAGGCAATGGCT...GTGGTATGTGCTGGGGGAGTGTCTTGGGAAGGGACCCTGGATTGGCCTCCAAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR TCA 90 bp | CAGCTGAGGCTGGCTCGCCCCTCCTGCTCTCCCACAATAGATCTTTCTATGTACGGCTGTAGGTGGAACTaGCAGGCAGGCGGGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: QLRLARPSCSPTIDLSMYGCRWN*QAGGQL Trigger: GAGCTGCCCGCCTGCCTGTCAGTTCCACCTACAGCC...GTACATAGAAAGATCTATTGTGGGAGAGCAGGAGGGGCGAGCCAGCCTCAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR GCA 90 bp | CAGCTGAGGCTGGCTCGCCCCTCCTGCTCTCCCACAATAGATCTTTCTATGTACGCTCTACGCTGGAACTaGACCCAGGGCTGGGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QLRLARPSCSPTIDLSMYALRWN*TQGWER Trigger: CCGCTCCCAGCCCTGGGTGCAGTTCCAGCGTAGAGC...GTACATAGAAAGATCTATTGTGGGAGAGCAGGAGGGGCGAGCCAGCCTCAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR GCA 90 bp | CACCAGCCCTGTGACATCCAAGCAGCACCCCTCCCCTCCCAAGGGTCCACAGAGAGCTGCAGCTTGCGGTaGTGTTGTCTAGGCTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: HQPCDIQAAPLPSQGSTESCSLR*CCLGFK Trigger: CTTGAAGCCTAGACAACAGCACCGCAAGCTGCAGCT...CTCTGTGGACCCTTGGGAGGGGAGGGGTGCTGCTTGGATGTCACAGGGCTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR GCA 90 bp | ACCCTAGCAGCTGAGGCTGGCTCGCCCCTCCTGCTCTCCCACAATAGATCTTTCAGCTCGCCGTTGAGCTaGGCCATGGTGGACTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLAAEAGSPLLLSHNRSFSSPLS*AMVDSL Trigger: CAACGAGTCCACCATGGCGCAGCTCAACGGCGAGCT...GAAAGATCTATTGTGGGAGAGCAGGAGGGGCGAGCCAGCCTCAGCTGCTAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CCA 90 bp | GTCCCTTCCCAAGACACTCCCCCAGCACATACCACAGATGAGCTCTGCCGACCCGCTCACAGCAGCCAGTaGTATCAGCTCCAGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VPSQDTPPAHTTDELCRPAHSSQ*YQLQPG Trigger: TCCTGGCTGGAGCTGATACCACTGGCTGCTGTGAGC...GGGTCGGCAGAGCTCATCTGTGGTATGTGCTGGGGGAGTGTCTTGGGAAGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR TCA 90 bp | CCTTCCCAAGACACTCCCCCAGCACATACCACAGATGAGCTCTGCCGACCCCTGTCACCAGGGTGGGCATaGCATTGCGGTACACGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSQDTPPAHTTDELCRPLSPGWA*HCGTRC Trigger: ACAACGTGTACCGCAATGTCATGCCCACCCTGGTGA...CAGGGGTCGGCAGAGCTCATCTGTGGTATGTGCTGGGGGAGTGTCTTGGGAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR GCA 90 bp | AGGGTCCCTTCCCAAGACACTCCCCCAGCACATACCACAGATGAGCTCTGCCGAGCACCTCTGTCCCATTaGCTGTTAGCAGGTGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: RVPSQDTPPAHTTDELCRAPLSH*LLAGGR Trigger: GCGTCCACCTGCTAACAGGCAATGGGACAGAGGTGC...TCGGCAGAGCTCATCTGTGGTATGTGCTGGGGGAGTGTCTTGGGAAGGGACCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CCA 90 bp | GCAGCTGAGGCTGGCTCGCCCCTCCTGCTCTCCCACAATAGATCTTTCTATGTAGGTGGCTGGCCTCTCTaGGAGCAGGTAGAGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: AAEAGSPLLLSHNRSFYVGGWPL*EQVEAD Trigger: GTCAGCCTCTACCTGCTCCCAGAGAGGCCAGCCACC...TACATAGAAAGATCTATTGTGGGAGAGCAGGAGGGGCGAGCCAGCCTCAGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR GCA 90 bp | GCAGCTGAGGCTGGCTCGCCCCTCCTGCTCTCCCACAATAGATCTTTCTATGTAAAAGCCCGCATTTCCTaGTGGGTGCTGGCCGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AAEAGSPLLLSHNRSFYVKARIS*WVLAGV Trigger: CACACCGGCCAGCACCCAGCAGGAAATGCGGGCTTT...TACATAGAAAGATCTATTGTGGGAGAGCAGGAGGGGCGAGCCAGCCTCAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR GCA 90 bp | GCCCTCACCCTAGCAGCTGAGGCTGGCTCGCCCCTCCTGCTCTCCCACAATAGAAGATTGTGTGGTAGGTaGCAATGTCCTGAATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALTLAAEAGSPLLLSHNRRLCGR*QCPECL Trigger: CAGGCATTCAGGACATTGGCACCTACCACACAATCT...TCTATTGTGGGAGAGCAGGAGGGGCGAGCCAGCCTCAGCTGCTAGGGTGAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR GCA 90 bp | CTCCTGCTCTCCCACAATAGATCTTTCTATGTACAGCCACGTTTATACAGGCACGGCGAGGGAGGCTCATaGAGGAAGGCCGCGGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: LLLSHNRSFYVQPRLYRHGEGGS*RKAAAP Trigger: CGGGGCCGCGGCCTTCCTGCATGAGCCTCCCTCGCC...GTGCCTGTATAAACGTGGCTGTACATAGAAAGATCTATTGTGGGAGAGCAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR TCA 90 bp | GTTTGGAGGCCAATCCAGGGTCCCTTCCCAAGACACTCCCCCAGCACATACCACGACATCGACGTAGCCTaGTCTCGTTTGTTGTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VWRPIQGPFPRHSPSTYHDIDVA*SRLLSE Trigger: CTCGGACAACAAACGAGATCAGGCTACGTCGATGTC...GTGGTATGTGCTGGGGGAGTGTCTTGGGAAGGGACCCTGGATTGGCCTCCAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR TCA 90 bp | GCAGCTGAGGCTGGCTCGCCCCTCCTGCTCTCCCACAATAGATCTTTCTATGTAGGTACACGTTGTCCTTaGGGTGGTCGATGGAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: AAEAGSPLLLSHNRSFYVGTRCP*GGRWNR Trigger: GCGGTTCCATCGACCACCTCAAGGACAACGTGTACC...TACATAGAAAGATCTATTGTGGGAGAGCAGGAGGGGCGAGCCAGCCTCAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CCA 90 bp | CTCACCCTAGCAGCTGAGGCTGGCTCGCCCCTCCTGCTCTCCCACAATAGATCTACGTTGTCCTTGAGGTaGTCGATGGAACCGCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: LTLAAEAGSPLLLSHNRSTLSLR*SMEPQK Trigger: TTTCTGCGGTTCCATCGACCACCTCAAGGACAACGT...AGATCTATTGTGGGAGAGCAGGAGGGGCGAGCCAGCCTCAGCTGCTAGGGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR GCA 90 bp | AGGCTGGCTCGCCCCTCCTGCTCTCCCACAATAGATCTTTCTATGTACAGCCACCAGCAGCCAGAAGAGTaGGGTTCCCAAAGACGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RLARPSCSPTIDLSMYSHQQPEE*GSQRRL Trigger: TAGACGTCTTTGGGAACCGCACTCTTCTGGCTGCTG...GTGGCTGTACATAGAAAGATCTATTGTGGGAGAGCAGGAGGGGCGAGCCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS TCA 90 bp | AGAGGCCGGTGCGGCTCTCGCTGCTGCTGGGCTCTGTGTCTTCGCTaGGCGCCAGGCGCGGGGGCGCGGGCGGCGGCGGCGCGGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RGRCGSRCCWALCLR*APGAGARAAAARAA Trigger: AGCTGCCCGCGCCGCCGCCGCCCGCGCCCCCGCGCCTGGCGCTCAGCGAAGACACAGAGCCCAGCAGCAGCGAGAGCCGCACCGGCCTCT 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS TCA 90 bp | GGCTGGGCTCCAGCCCGCCAGGACCCTCGACGGAGCGGGCGCTCTTaGGCCCGGCACCCTCAACGGTGCGGGCACCAGGAGGCTCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GWAPARQDPRRSGRS*ARHPQRCGHQEARR Trigger: CCGCCGAGCCTCCTGGTGCCCGCACCGTTGAGGGTGCCGGGCTCAAGAGCGCCCGCTCCGTCGAGGGTCCTGGCGGGCTGGAGCCCAGCC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS GCA 90 bp | TCCCGCTCTTCCCTCGGGAGCCGGCGGCGCGCAGGTCGAGCCTCGTaGACGTCGACGCCTGAGTCCAGGCTGGCATCGGTGCTGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SRSSLGSRRRAGRAS*TSTPESRLASVLRP Trigger: CGGCCGCAGCACCGATGCCAGCCTGGACTCAGGCGTCGACGTGCACGAGGCTCGACCTGCGCGCCGCCGGCTCCCGAGGGAAGAGCGGGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CCA 90 bp | GGCGCGCAGGTCGAGCCTCGTGCACGTCGACGCCTGAGTCCAGGCTaGCATCGGTGCTGCGGCCGCCGCTGCCCGCCTGCAGGTCGATGT | + |
|
Preference number: 5 (lower is better) Translates to: GAQVEPRARRRLSPG*HRCCGRRCPPAGRC Trigger: ACATCGACCTGCAGGCGGGCAGCGGCGGCCGCAGCACCGATGCCAGCCTGGACTCAGGCGTCGACGTGCACGAGGCTCGACCTGCGCGCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS GCA 90 bp | GAGCCTCGTGCACGTCGACGCCTGAGTCCAGGCTGGCATCGGTGCTaGGGCCGCCGCTGCCCGCCTGCAGGTCGATGTAGGAGTGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: EPRARRRLSPGWHRC*GRRCPPAGRCRSGA Trigger: TGCGCCACTCCTACATCGACCTGCAGGCGGGCAGCGGCGGCCGCAGCACCGATGCCAGCCTGGACTCAGGCGTCGACGTGCACGAGGCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS GCA 90 bp | GTCGAGCCTCGTGCACGTCGACGCCTGAGTCCAGGCTGGCATCGGTaGTGCGGCCGCCGCTGCCCGCCTGCAGGTCGATGTAGGAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VEPRARRRLSPGWHR*CGRRCPPAGRCRSG Trigger: GCCACTCCTACATCGACCTGCAGGCGGGCAGCGGCGGCCGCAGCACCGATGCCAGCCTGGACTCAGGCGTCGACGTGCACGAGGCTCGAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CCA 90 bp | CACCCTCAACGGTGCGGGCACCAGGAGGCTCGGCGGCCGGTCGGCTaGCGGAGCGCGGTTTGGCACGGAAGAAGTCATCCCGCGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: HPQRCGHQEARRPVG*RSAVWHGRSHPARM Trigger: CATCCTCGCGGGATGACTTCTTCCGTGCCAAACCGCGCTCCGCCAGCCGACCGGCCGCCGAGCCTCCTGGTGCCCGCACCGTTGAGGGTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CCA 90 bp | CTTGCTCTCGGCCGCCCCCTTGTGGCCCAGATAATGGTCGAAGGATaGCGGCGGCGAGGGAGGCTCATGCAGGAAGGCCGCGGCCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: LALGRPLVAQIMVEG*RRRGRLMQEGRGPG Trigger: GCCGGGGCCGCGGCCTTCCTGCATGAGCCTCCCTCGCCGCCGCCATCCTTCGACCATTATCTGGGCCACAAGGGGGCGGCCGAGAGCAAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CAA 90 bp | TGGGGGACCGGGTCCCTCCCACCTCCCTCTGTTTGGAGGCCAATCCAGGGTCCCAATGAGCTGGCCCGGTaGGCTGAGGGACGGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: WGTGSLPPPSVWRPIQGPNELAR*AEGRRP Trigger: CGGCCGCCGTCCCTCAGCCAACCGGGCCAGCTCATT...GGGACCCTGGATTGGCCTCCAAACAGAGGGAGGTGGGAGGGACCCGGTCCCCCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS GCA 90 bp | CGTCGACGCCTGAGTCCAGGCTGGCATCGGTGCTGCGGCCGCCGCTaGCCGCCTGCAGGTCGATGTAGGAGTGGCGCACTTGTGAATTGG | + |
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Preference number: 5 (lower is better) Translates to: RRRLSPGWHRCCGRR*PPAGRCRSGALVNW Trigger: CCAATTCACAAGTGCGCCACTCCTACATCGACCTGCAGGCGGGCAGCGGCGGCCGCAGCACCGATGCCAGCCTGGACTCAGGCGTCGACG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS TCA 90 bp | GCCGCCGCTGCCCGCCTGCAGGTCGATGTAGGAGTGGCGCACTTGTaGATTGGAACGTCCGTCCAGGGATACGAACCAGGCGCGCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AAAARLQVDVGVAHL*IGTSVQGYEPGARV Trigger: CACCCGCGCGCCTGGTTCGTATCCCTGGACGGACGTTCCAATTCACAAGTGCGCCACTCCTACATCGACCTGCAGGCGGGCAGCGGCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CCA 90 bp | CGCTGCCCGCCTGCAGGTCGATGTAGGAGTGGCGCACTTGTGAATTaGAACGTCCGTCCAGGGATACGAACCAGGCGCGCGGGTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RCPPAGRCRSGALVN*NVRPGIRTRRAGEA Trigger: AGCCTCACCCGCGCGCCTGGTTCGTATCCCTGGACGGACGTTCCAATTCACAAGTGCGCCACTCCTACATCGACCTGCAGGCGGGCAGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CCA 90 bp | GTACCCACAGTCCACTCTTGGGGTCAAACCTCCAGGCTGGAATGCTaGTGCCCACAGCAAGGGCACGAGGCTCTGAGGGCACTGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VPTVHSWGQTSRLEC*CPQQGHEALRALAG Trigger: CCCTGCCAGTGCCCTCAGAGCCTCGTGCCCTTGCTGTGGGCACCAGCATTCCAGCCTGGAGGTTTGACCCCAAGAGTGGACTGTGGGTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CAA 90 bp | GGGGACCGGGTCCCTCCCACCTCCCTCTGTTTGGAGGCCAATCCAGGGTCCCTTCGGTACACGTTGTCCTaGAGGTGGTCGATGGAACCG | + |
|
Preference number: 5 (lower is better) Translates to: GDRVPPTSLCLEANPGSLRYTLS*RWSMEP Trigger: CGGTTCCATCGACCACCTCAAGGACAACGTGTACCG...AAGGGACCCTGGATTGGCCTCCAAACAGAGGGAGGTGGGAGGGACCCGGTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CAA 90 bp | CCCCTCCCATGGGGGACCGGGTCCCTCCCACCTCCCTCTGTTTGGAGGCCAATCAGGGTGGGCATGACATaGCGGTACACGTTGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PLPWGTGSLPPPSVWRPIRVGMT*RYTLSL Trigger: CAAGGACAACGTGTACCGCAATGTCATGCCCACCCT...GATTGGCCTCCAAACAGAGGGAGGTGGGAGGGACCCGGTCCCCCATGGGAGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CAA 90 bp | GTTTGGAGGCCAATCCAGGGTCCCTTCCCAAGACACTCCCCCAGCACATACCACTGCCACGGGCTCTTCTaGTCGCCAGCCTCGTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VWRPIQGPFPRHSPSTYHCHGLF*SPASSP Trigger: GGGCGACGAGGCTGGCGACAAGAAGAGCCCGTGGCA...GTGGTATGTGCTGGGGGAGTGTCTTGGGAAGGGACCCTGGATTGGCCTCCAAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS TCA 90 bp | GCTGACGGATGCGTACAACGGCAGCTTGTCAACACGCCAGGGCACTaGGTTGGTGAGGAAACCGGGGCGGGCAGCAGTGACCAAGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: ADGCVQRQLVNTPGH*VGEETGAGSSDQDP Trigger: TGGGTCTTGGTCACTGCTGCCCGCCCCGGTTTCCTCACCAACTCAGTGCCCTGGCGTGTTGACAAGCTGCCGTTGTACGCATCCGTCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS GCA 90 bp | GCGCCAGCTGGTCTACCGACTGTGACAGCAGAAAGTCGGGGGTCTTaGTCTCGGCCGCCCCCTTGTGGCCCAGATAATGGTCGAAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: APAGLPTVTAESRGS*SRPPPCGPDNGRRM Trigger: CATCCTTCGACCATTATCTGGGCCACAAGGGGGCGGCCGAGAGCAAGACCCCCGACTTTCTGCTGTCACAGTCGGTAGACCAGCTGGCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CAA 90 bp | AGGGTCCCTTCCCAAGACACTCCCCCAGCACATACCACAGATGAGCTCTGCCGATCCAGCCAGGAGCCATaGCCTGAGCTGGAGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RVPSQDTPPAHTTDELCRSSQEP*PELEAS Trigger: CGAGGCCTCCAGCTCAGGCAATGGCTCCTGGCTGGA...TCGGCAGAGCTCATCTGTGGTATGTGCTGGGGGAGTGTCTTGGGAAGGGACCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CAA 90 bp | TGGGGGACCGGGTCCCTCCCACCTCCCTCTGTTTGGAGGCCAATCCAGGGTCCCACATTGCGGTACACGTaGTCCTTGAGGTGGTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: WGTGSLPPPSVWRPIQGPTLRYT*SLRWSM Trigger: CATCGACCACCTCAAGGACAACGTGTACCGCAATGT...GGGACCCTGGATTGGCCTCCAAACAGAGGGAGGTGGGAGGGACCCGGTCCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS TCA 90 bp | CGTAGTACCAGCAGCCAGAAGAGTGCGGTTCCCAAAGACGTCTACTaGGGCCCTGGCCAGGGGCACCAGCTCCCCGCTCACATATACCTG | + |
|
Preference number: 5 (lower is better) Translates to: RSTSSQKSAVPKDVY*GPGQGHQLPAHIYL Trigger: CAGGTATATGTGAGCGGGGAGCTGGTGCCCCTGGCCAGGGCCTCAGTAGACGTCTTTGGGAACCGCACTCTTCTGGCTGCTGGTACTACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS GCA 90 bp | TTCGTACCCACAGTCCACTCTTGGGGTCAAACCTCCAGGCTGGAATaGTGGTGCCCACAGCAAGGGCACGAGGCTCTGAGGGCACTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FVPTVHSWGQTSRLE*WCPQQGHEALRALA Trigger: TGCCAGTGCCCTCAGAGCCTCGTGCCCTTGCTGTGGGCACCAGCATTCCAGCCTGGAGGTTTGACCCCAAGAGTGGACTGTGGGTACGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CAA 90 bp | CCTCCCTCTGTTTGGAGGCCAATCCAGGGTCCCTTCCCAAGACACTCCCCCAGCACCCACAGTCCACTCTaGGGGTCAAACCTCCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PPSVWRPIQGPFPRHSPSTHSPL*GSNLQA Trigger: AGCCTGGAGGTTTGACCCCAAGAGTGGACTGTGGGT...GCTGGGGGAGTGTCTTGGGAAGGGACCCTGGATTGGCCTCCAAACAGAGGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CAA 90 bp | CCCACCTCCCTCTGTTTGGAGGCCAATCCAGGGTCCCTTCCCAAGACACTCCCCCAGCTTGCGGTGCTGTaGTCTAGGCTTCAAGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PTSLCLEANPGSLPKTLPQLAVL*SRLQAA Trigger: CGCTGCTTGAAGCCTAGACAACAGCACCGCAAGCTG...GGGGAGTGTCTTGGGAAGGGACCCTGGATTGGCCTCCAAACAGAGGGAGGTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CAA 90 bp | ACCCTAGCAGCTGAGGCTGGCTCGCCCCTCCTGCTCTCCCACAATAGATCTTTCCCGGAGAGCTGCAGCTaGCGGTGCTGTTGTCTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TLAAEAGSPLLLSHNRSFPESCS*RCCCLG Trigger: GCCTAGACAACAGCACCGCAAGCTGCAGCTCTCCGG...GAAAGATCTATTGTGGGAGAGCAGGAGGGGCGAGCCAGCCTCAGCTGCTAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS GCA 90 bp | TCCAGCAGCTTCTTCTCGGTTAGAGCCTGCAGCTCGCCGTTGAGCTaGGCCATGGTGGACTCGTTGAACAGCACCGGAATGGTGACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSFFSVRACSSPLS*AMVDSLNSTGMVTE Trigger: CTCGGTCACCATTCCGGTGCTGTTCAACGAGTCCACCATGGCGCAGCTCAACGGCGAGCTGCAGGCTCTAACCGAGAAGAAGCTGCTGGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CAA 90 bp | GTTTGGAGGCCAATCCAGGGTCCCTTCCCAAGACACTCCCCCAGCACATACCACGCGTACAACGGCAGCTaGTCAACACGCCAGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: VWRPIQGPFPRHSPSTYHAYNGS*STRQGT Trigger: AGTGCCCTGGCGTGTTGACAAGCTGCCGTTGTACGC...GTGGTATGTGCTGGGGGAGTGTCTTGGGAAGGGACCCTGGATTGGCCTCCAAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CAA 90 bp | ACCCTAGCAGCTGAGGCTGGCTCGCCCCTCCTGCTCTCCCACAATAGATCTTTCGGCACCTCTGTCCCATaGCCTGTTAGCAGGTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: TLAAEAGSPLLLSHNRSFGTSVP*PVSRWT Trigger: CGTCCACCTGCTAACAGGCAATGGGACAGAGGTGCC...GAAAGATCTATTGTGGGAGAGCAGGAGGGGCGAGCCAGCCTCAGCTGCTAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CAA 90 bp | GCAGCTGAGGCTGGCTCGCCCCTCCTGCTCTCCCACAATAGATCTTTCTATGTAAGAAAGTCGGGGGTCTaGCTCTCGGCCGCCCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AAEAGSPLLLSHNRSFYVRKSGV*LSAAPL Trigger: CAAGGGGGCGGCCGAGAGCAAGACCCCCGACTTTCT...TACATAGAAAGATCTATTGTGGGAGAGCAGGAGGGGCGAGCCAGCCTCAGCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CAA 90 bp | AGCCCTGTGACATCCAAGCAGCACCCCTCCCCTCCCAAGGGTCCACAGAGATTGGCCATGGTGGACTCGTaGAACAGCACCGGAATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SPVTSKQHPSPPKGPQRLAMVDS*NSTGMV Trigger: CACCATTCCGGTGCTGTTCAACGAGTCCACCATGGC...CAATCTCTGTGGACCCTTGGGAGGGGAGGGGTGCTGCTTGGATGTCACAGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS TCA 90 bp | TGTGAATTGGAACGTCCGTCCAGGGATACGAACCAGGCGCGCGGGTaGGGCTTCACTCCCAGTTCCAGCAGCTTCTTCTCGGTTAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CELERPSRDTNQARG*GFTPSSSSFFSVRA Trigger: GGCTCTAACCGAGAAGAAGCTGCTGGAACTGGGAGTGAAGCCTCACCCGCGCGCCTGGTTCGTATCCCTGGACGGACGTTCCAATTCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CCA 90 bp | GATGTGCACAAGGTCCTCATAGAGGATGAGGGTGGCTGGCCTCTCTaGGAGCAGGTAGAGGCTGACGGATGCGTACAACGGCAGCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: DVHKVLIEDEGGWPL*EQVEADGCVQRQLV Trigger: GACAAGCTGCCGTTGTACGCATCCGTCAGCCTCTACCTGCTCCCAGAGAGGCCAGCCACCCTCATCCTCTATGAGGACCTTGTGCACATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CAA 90 bp | CAGCTGAGGCTGGCTCGCCCCTCCTGCTCTCCCACAATAGATCTTTCTATGTACCTGGCGGAGCGCGGTTaGGCACGGAAGAAGTCATCC | + |
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Preference number: 5 (lower is better) Translates to: QLRLARPSCSPTIDLSMYLAERG*ARKKSS Trigger: GGATGACTTCTTCCGTGCCAAACCGCGCTCCGCCAG...GTACATAGAAAGATCTATTGTGGGAGAGCAGGAGGGGCGAGCCAGCCTCAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CCA 90 bp | ATCACCAGGGTGGGCATGACATTGCGGTACACGTTGTCCTTGAGGTaGTCGATGGAACCGCAGAAAATGAGCTGGCCCGGTTGGCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: ITRVGMTLRYTLSLR*SMEPQKMSWPGWLR Trigger: CCTCAGCCAACCGGGCCAGCTCATTTTCTGCGGTTCCATCGACCACCTCAAGGACAACGTGTACCGCAATGTCATGCCCACCCTGGTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CAA 90 bp | ACTCCCCCAGCACATACCACAGATGAGCTCTGCCGACCCCTGAGCTCTTCTCCGGCAGATGAGATGGAGTaGAGACATCGACGTAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: TPPAHTTDELCRPLSSSPADEME*RHRRSL Trigger: CAGGCTACGTCGATGTCTCAACTCCATCTCATCTGC...CGGAGAAGAGCTCAGGGGTCGGCAGAGCTCATCTGTGGTATGTGCTGGGGGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CAA 90 bp | AGGGTCCCTTCCCAAGACACTCCCCCAGCACATACCACAGATGAGCTCTGCCGATGGCGCACTTGTGAATaGGAACGTCCGTCCAGGGAT | + |
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Preference number: 5 (lower is better) Translates to: RVPSQDTPPAHTTDELCRWRTCE*ERPSRD Trigger: ATCCCTGGACGGACGTTCCAATTCACAAGTGCGCCA...TCGGCAGAGCTCATCTGTGGTATGTGCTGGGGGAGTGTCTTGGGAAGGGACCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS TCA 90 bp | CGTCAGCAGGAAGATTGTGTGGTAGGTGCCAATGTCCTGAATGCCTaGGGTGATGGTAACCAGCCCAGATGTAGGGGAGGCCATGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: RQQEDCVVGANVLNA*GDGNQPRCRGGHGS Trigger: GCTGCCATGGCCTCCCCTACATCTGGGCTGGTTACCATCACCTCAGGCATTCAGGACATTGGCACCTACCACACAATCTTCCTGCTGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS GCA 90 bp | CAAAAGTCCAGTAGAGCTGTCGGCCTTCCTTCCGAATCACACCAGTaGCATTTCGTACCCACAGTCCACTCTTGGGGTCAAACCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: QKSSRAVGLPSESHQ*HFVPTVHSWGQTSR Trigger: CCTGGAGGTTTGACCCCAAGAGTGGACTGTGGGTACGAAATGGCACTGGTGTGATTCGGAAGGAAGGCCGACAGCTCTACTGGACTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS-3UTR CAA 90 bp | CTCCTGCTCTCCCACAATAGATCTTTCTATGTACAGCCACGTTTATACAGGCACTCGTCAGCAGGAAGATaGTGTGGTAGGTGCCAATGT | + |
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Preference number: 5 (lower is better) Translates to: LLLSHNRSFYVQPRLYRHSSAGR*CGRCQC Trigger: ACATTGGCACCTACCACACAATCTTCCTGCTGACGA...GTGCCTGTATAAACGTGGCTGTACATAGAAAGATCTATTGTGGGAGAGCAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CAA 90 bp | AGGCTGGGCTCCAGCCCGCCAGGACCCTCGACGGAGCGGGCGCTCTaGAGCCCGGCACCCTCAACGGTGCGGGCACCAGGAGGCTCGGCG | + |
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Preference number: 6 (lower is better) Translates to: RLGSSPPGPSTERAL*SPAPSTVRAPGGSA Trigger: CGCCGAGCCTCCTGGTGCCCGCACCGTTGAGGGTGCCGGGCTCAAGAGCGCCCGCTCCGTCGAGGGTCCTGGCGGGCTGGAGCCCAGCCT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CAA 72 bp | AGCGGCCGCTCCTCCCGCCGCTGCCACGGGCTCTTCTaGTCGCCAGCCTCGTCGCCCACCTCCGCCCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SGRSSRRCHGLF*SPASSPTSAPS Trigger: GCTGGGGGCGGAGGTGGGCGACGAGGCTGGCGACAAGAAGAGCCCGTGGCAGCGGCGGGAGGAGCGGCCGCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS GCA 72 bp | TCCCTCGGGAGCCGGCGGCGCGCAGGTCGAGCCTCGTaGACGTCGACGCCTGAGTCCAGGCTGGCATCGGTG | + |
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Preference number: 6 (lower is better) Translates to: SLGSRRRAGRAS*TSTPESRLASV Trigger: CACCGATGCCAGCCTGGACTCAGGCGTCGACGTGCACGAGGCTCGACCTGCGCGCCGCCGGCTCCCGAGGGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CCA 72 bp | CGGTGCGGGCACCAGGAGGCTCGGCGGCCGGTCGGCTaGCGGAGCGCGGTTTGGCACGGAAGAAGTCATCCC | + |
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Preference number: 6 (lower is better) Translates to: RCGHQEARRPVG*RSAVWHGRSHP Trigger: GGGATGACTTCTTCCGTGCCAAACCGCGCTCCGCCAGCCGACCGGCCGCCGAGCCTCCTGGTGCCCGCACCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CCA 72 bp | GTCGAGCCTCGTGCACGTCGACGCCTGAGTCCAGGCTaGCATCGGTGCTGCGGCCGCCGCTGCCCGCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: VEPRARRRLSPG*HRCCGRRCPPA Trigger: TGCAGGCGGGCAGCGGCGGCCGCAGCACCGATGCCAGCCTGGACTCAGGCGTCGACGTGCACGAGGCTCGAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CAA 72 bp | TCCAGCCCGCCAGGACCCTCGACGGAGCGGGCGCTCTaGAGCCCGGCACCCTCAACGGTGCGGGCACCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SSPPGPSTERAL*SPAPSTVRAPG Trigger: TCCTGGTGCCCGCACCGTTGAGGGTGCCGGGCTCAAGAGCGCCCGCTCCGTCGAGGGTCCTGGCGGGCTGGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS GCA 72 bp | GCACGTCGACGCCTGAGTCCAGGCTGGCATCGGTGCTaGGGCCGCCGCTGCCCGCCTGCAGGTCGATGTAGG | + |
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Preference number: 6 (lower is better) Translates to: ARRRLSPGWHRC*GRRCPPAGRCR Trigger: CCTACATCGACCTGCAGGCGGGCAGCGGCGGCCGCAGCACCGATGCCAGCCTGGACTCAGGCGTCGACGTGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS GCA 72 bp | CGTGCACGTCGACGCCTGAGTCCAGGCTGGCATCGGTaGTGCGGCCGCCGCTGCCCGCCTGCAGGTCGATGT | + |
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Preference number: 6 (lower is better) Translates to: RARRRLSPGWHR*CGRRCPPAGRC Trigger: ACATCGACCTGCAGGCGGGCAGCGGCGGCCGCAGCACCGATGCCAGCCTGGACTCAGGCGTCGACGTGCACG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CAA 90 bp | CGGCCTTCGGGTGCCACCACCTCGTCCAGCAGGGGCGTTAGCGAGTaGTCCTCCGGCGAGCAGAGGCCGGTGCGGCTCTCGCTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RPSGATTSSSRGVSE*SSGEQRPVRLSLLL Trigger: CAGCAGCAGCGAGAGCCGCACCGGCCTCTGCTCGCCGGAGGACAACTCGCTAACGCCCCTGCTGGACGAGGTGGTGGCACCCGAAGGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CAA 72 bp | GGTGCCACCACCTCGTCCAGCAGGGGCGTTAGCGAGTaGTCCTCCGGCGAGCAGAGGCCGGTGCGGCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: GATTSSSRGVSE*SSGEQRPVRLS Trigger: CGAGAGCCGCACCGGCCTCTGCTCGCCGGAGGACAACTCGCTAACGCCCCTGCTGGACGAGGTGGTGGCACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS TCA 72 bp | GAGGGACGGCGGCCGCGCCAGCTGGTCTACCGACTGTaGCAGCAGAAAGTCGGGGGTCTTGCTCTCGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: EGRRPRQLVYRL*QQKVGGLALGR Trigger: GCGGCCGAGAGCAAGACCCCCGACTTTCTGCTGTCACAGTCGGTAGACCAGCTGGCGCGGCCGCCGTCCCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS GCA 72 bp | CTGAGTCCAGGCTGGCATCGGTGCTGCGGCCGCCGCTaGCCGCCTGCAGGTCGATGTAGGAGTGGCGCACTT | + |
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Preference number: 6 (lower is better) Translates to: LSPGWHRCCGRR*PPAGRCRSGAL Trigger: AAGTGCGCCACTCCTACATCGACCTGCAGGCGGGCAGCGGCGGCCGCAGCACCGATGCCAGCCTGGACTCAG 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS GCA 72 bp | ACGTTGAACACCATTAGCGGCCGCTCCTCCCGCCGCTaGCACGGGCTCTTCTTGTCGCCAGCCTCGTCGCCC | + |
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Preference number: 6 (lower is better) Translates to: TLNTISGRSSRR*HGLFLSPASSP Trigger: GGGCGACGAGGCTGGCGACAAGAAGAGCCCGTGGCAGCGGCGGGAGGAGCGGCCGCTAATGGTGTTCAACGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CCA 72 bp | TGGTCGATGGAACCGCAGAAAATGAGCTGGCCCGGTTaGCTGAGGGACGGCGGCCGCGCCAGCTGGTCTACC | + |
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Preference number: 6 (lower is better) Translates to: WSMEPQKMSWPG*LRDGGRASWST Trigger: GGTAGACCAGCTGGCGCGGCCGCCGTCCCTCAGCCAACCGGGCCAGCTCATTTTCTGCGGTTCCATCGACCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CAA 72 bp | GTGGTCGATGGAACCGCAGAAAATGAGCTGGCCCGGTaGGCTGAGGGACGGCGGCCGCGCCAGCTGGTCTAC | + |
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Preference number: 6 (lower is better) Translates to: VVDGTAENELAR*AEGRRPRQLVY Trigger: GTAGACCAGCTGGCGCGGCCGCCGTCCCTCAGCCAACCGGGCCAGCTCATTTTCTGCGGTTCCATCGACCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS TCA 72 bp | AGCAGCCAGAAGAGTGCGGTTCCCAAAGACGTCTACTaGGGCCCTGGCCAGGGGCACCAGCTCCCCGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: SSQKSAVPKDVY*GPGQGHQLPAH Trigger: GTGAGCGGGGAGCTGGTGCCCCTGGCCAGGGCCTCAGTAGACGTCTTTGGGAACCGCACTCTTCTGGCTGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS GCA 72 bp | TCGGTCCCCAGGAAGGCAGGGAAAGCCCGCATTTCCTaGTGGGTGCTGGCCGGTGTGAGCGAAGCCCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: SVPRKAGKARIS*WVLAGVSEAQS Trigger: GCTTTGGGCTTCGCTCACACCGGCCAGCACCCAGCAGGAAATGCGGGCTTTCCCTGCCTTCCTGGGGACCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CCA 72 bp | GTCCCCAGGAAGGCAGGGAAAGCCCGCATTTCCTGCTaGGTGCTGGCCGGTGTGAGCGAAGCCCAAAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VPRKAGKARISC*VLAGVSEAQSW Trigger: CCAGCTTTGGGCTTCGCTCACACCGGCCAGCACCCAGCAGGAAATGCGGGCTTTCCCTGCCTTCCTGGGGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CAA 90 bp | GTTAGAGCCTGCAGCTCGCCGTTGAGCTGCGCCATGGTGGACTCGTaGAACAGCACCGGAATGGTGACCGAGCCGCTGACCGGTGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: VRACSSPLSCAMVDS*NSTGMVTEPLTGAE Trigger: CTCCGCACCGGTCAGCGGCTCGGTCACCATTCCGGTGCTGTTCAACGAGTCCACCATGGCGCAGCTCAACGGCGAGCTGCAGGCTCTAAC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CAA 72 bp | TGCAGCTCGCCGTTGAGCTGCGCCATGGTGGACTCGTaGAACAGCACCGGAATGGTGACCGAGCCGCTGACC | + |
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Preference number: 6 (lower is better) Translates to: CSSPLSCAMVDS*NSTGMVTEPLT Trigger: GGTCAGCGGCTCGGTCACCATTCCGGTGCTGTTCAACGAGTCCACCATGGCGCAGCTCAACGGCGAGCTGCA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CAA 90 bp | ACGGATGCGTACAACGGCAGCTTGTCAACACGCCAGGGCACTGAGTaGGTGAGGAAACCGGGGCGGGCAGCAGTGACCAAGACCCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: TDAYNGSLSTRQGTE*VRKPGRAAVTKTQV Trigger: TACCTGGGTCTTGGTCACTGCTGCCCGCCCCGGTTTCCTCACCAACTCAGTGCCCTGGCGTGTTGACAAGCTGCCGTTGTACGCATCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS TCA 72 bp | GCCCGCCTGCAGGTCGATGTAGGAGTGGCGCACTTGTaGATTGGAACGTCCGTCCAGGGATACGAACCAGGC | + |
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Preference number: 6 (lower is better) Translates to: ARLQVDVGVAHL*IGTSVQGYEPG Trigger: GCCTGGTTCGTATCCCTGGACGGACGTTCCAATTCACAAGTGCGCCACTCCTACATCGACCTGCAGGCGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS GCA 72 bp | ACAGTCCACTCTTGGGGTCAAACCTCCAGGCTGGAATaGTGGTGCCCACAGCAAGGGCACGAGGCTCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: TVHSWGQTSRLE*WCPQQGHEALR Trigger: CCTCAGAGCCTCGTGCCCTTGCTGTGGGCACCAGCATTCCAGCCTGGAGGTTTGACCCCAAGAGTGGACTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS GCA 72 bp | GGTCTACCGACTGTGACAGCAGAAAGTCGGGGGTCTTaGTCTCGGCCGCCCCCTTGTGGCCCAGATAATGGT | + |
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Preference number: 6 (lower is better) Translates to: GLPTVTAESRGS*SRPPPCGPDNG Trigger: ACCATTATCTGGGCCACAAGGGGGCGGCCGAGAGCAAGACCCCCGACTTTCTGCTGTCACAGTCGGTAGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS GCA 72 bp | ACTCCCAGTTCCAGCAGCTTCTTCTCGGTTAGAGCCTaGAGCTCGCCGTTGAGCTGCGCCATGGTGGACTCG | + |
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Preference number: 6 (lower is better) Translates to: TPSSSSFFSVRA*SSPLSCAMVDS Trigger: CGAGTCCACCATGGCGCAGCTCAACGGCGAGCTGCAGGCTCTAACCGAGAAGAAGCTGCTGGAACTGGGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CCA 72 bp | GAAGAGTGCGGTTCCCAAAGACGTCTACTGAGGCCCTaGCCAGGGGCACCAGCTCCCCGCTCACATATACCT | + |
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Preference number: 6 (lower is better) Translates to: EECGSQRRLLRP*PGAPAPRSHIP Trigger: AGGTATATGTGAGCGGGGAGCTGGTGCCCCTGGCCAGGGCCTCAGTAGACGTCTTTGGGAACCGCACTCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CCA 72 bp | CCTGCAGGTCGATGTAGGAGTGGCGCACTTGTGAATTaGAACGTCCGTCCAGGGATACGAACCAGGCGCGCG | + |
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Preference number: 6 (lower is better) Translates to: PAGRCRSGALVN*NVRPGIRTRRA Trigger: CGCGCGCCTGGTTCGTATCCCTGGACGGACGTTCCAATTCACAAGTGCGCCACTCCTACATCGACCTGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CAA 90 bp | CCCAGTTCCAGCAGCTTCTTCTCGGTTAGAGCCTGCAGCTCGCCGTaGAGCTGCGCCATGGTGGACTCGTTGAACAGCACCGGAATGGTG | + |
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Preference number: 6 (lower is better) Translates to: PSSSSFFSVRACSSP*SCAMVDSLNSTGMV Trigger: CACCATTCCGGTGCTGTTCAACGAGTCCACCATGGCGCAGCTCAACGGCGAGCTGCAGGCTCTAACCGAGAAGAAGCTGCTGGAACTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS GCA 72 bp | TTGTTGTCCGAGGGGCCGGAGAGCTGCAGCTTGCGGTaGTGTTGTCTAGGCTTCAAGCAGCGTCTTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LLSEGPESCSLR*CCLGFKQRLLQ Trigger: CTGCAGAAGACGCTGCTTGAAGCCTAGACAACAGCACCGCAAGCTGCAGCTCTCCGGCCCCTCGGACAACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CCA 72 bp | GAGAGAGGCACCTCTGTCCCATTGCCTGTTAGCAGGTaGACGCTCACAGCAGCCAGTGGTATCAGCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: ERGTSVPLPVSR*TLTAASGISSS Trigger: GCTGGAGCTGATACCACTGGCTGCTGTGAGCGTCCACCTGCTAACAGGCAATGGGACAGAGGTGCCTCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CAA 72 bp | GCAGCGCCAGGGCAGCCAGGATCGTCAGCAGGAAGATaGTGTGGTAGGTGCCAATGTCCTGAATGCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: AAPGQPGSSAGR*CGRCQCPECLR Trigger: CCTCAGGCATTCAGGACATTGGCACCTACCACACAATCTTCCTGCTGACGATCCTGGCTGCCCTGGCGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CAA 72 bp | GTCCGAGGGGCCGGAGAGCTGCAGCTTGCGGTGCTGTaGTCTAGGCTTCAAGCAGCGTCTTCTGCAGTAGTA | + |
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Preference number: 6 (lower is better) Translates to: VRGAGELQLAVL*SRLQAASSAVV Trigger: TACTACTGCAGAAGACGCTGCTTGAAGCCTAGACAACAGCACCGCAAGCTGCAGCTCTCCGGCCCCTCGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CAA 72 bp | AGCAGCTTCTTCTCGGTTAGAGCCTGCAGCTCGCCGTaGAGCTGCGCCATGGTGGACTCGTTGAACAGCACC | + |
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Preference number: 6 (lower is better) Translates to: SSFFSVRACSSP*SCAMVDSLNST Trigger: GGTGCTGTTCAACGAGTCCACCATGGCGCAGCTCAACGGCGAGCTGCAGGCTCTAACCGAGAAGAAGCTGCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS GCA 72 bp | TTCTTCTCGGTTAGAGCCTGCAGCTCGCCGTTGAGCTaGGCCATGGTGGACTCGTTGAACAGCACCGGAATG | + |
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Preference number: 6 (lower is better) Translates to: FFSVRACSSPLS*AMVDSLNSTGM Trigger: CATTCCGGTGCTGTTCAACGAGTCCACCATGGCGCAGCTCAACGGCGAGCTGCAGGCTCTAACCGAGAAGAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CAA 72 bp | TCTCGTTTGTTGTCCGAGGGGCCGGAGAGCTGCAGCTaGCGGTGCTGTTGTCTAGGCTTCAAGCAGCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SRLLSEGPESCS*RCCCLGFKQRL Trigger: AAGACGCTGCTTGAAGCCTAGACAACAGCACCGCAAGCTGCAGCTCTCCGGCCCCTCGGACAACAAACGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS CAA 72 bp | CGTAGGCTCCAGGGGTCCCCCGCAGATGAGATGGAGTaGAGACATCGACGTAGCCTGATCTCGTTTGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: RRLQGSPADEME*RHRRSLISFVV Trigger: GACAACAAACGAGATCAGGCTACGTCGATGTCTCAACTCCATCTCATCTGCGGGGGACCCCTGGAGCCTACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS TCA 72 bp | GAAGATTGTGTGGTAGGTGCCAATGTCCTGAATGCCTaGGGTGATGGTAACCAGCCCAGATGTAGGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: EDCVVGANVLNA*GDGNQPRCRGG Trigger: GCCTCCCCTACATCTGGGCTGGTTACCATCACCTCAGGCATTCAGGACATTGGCACCTACCACACAATCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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| CDS GCA 72 bp | AGTAGAGCTGTCGGCCTTCCTTCCGAATCACACCAGTaGCATTTCGTACCCACAGTCCACTCTTGGGGTCAA | + |
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Preference number: 6 (lower is better) Translates to: SRAVGLPSESHQ*HFVPTVHSWGQ Trigger: TTGACCCCAAGAGTGGACTGTGGGTACGAAATGGCACTGGTGTGATTCGGAAGGAAGGCCGACAGCTCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049057.5 |
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