Pregenerated sensors for FAM170B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078127Ensembl transcript IDs: ENSMUST00000104926.3
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGGACTCCGCCTTGGGGAAAGGTTCCCATTCCTCCCACCTTTGCTaGTCCACAGCCACATGGATGGCTCTTCTCCCCATCACCCTGGTC | + |
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Preference number: 1 (lower is better) Translates to: MDSALGKGSHSSHLC*STATWMALLPITLV Trigger: GACCAGGGTGATGGGGAGAAGAGCCATCCATGTGGCTGTGGAGCAGCAAAGGTGGGAGGAATGGGAACCTTTCCCCAAGGCGGAGTCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| 3UTR GCA 90 bp | GAAATGGACTCCGCCTTGGGGAAAGGTTCCCATTCCTCCCACCTTTaGTGCTCCACAGCCACATGGATGGCTCTTCTCCCCATCACCCTG | + |
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Preference number: 1 (lower is better) Translates to: EMDSALGKGSHSSHL*CSTATWMALLPITL Trigger: CAGGGTGATGGGGAGAAGAGCCATCCATGTGGCTGTGGAGCAGCAAAGGTGGGAGGAATGGGAACCTTTCCCCAAGGCGGAGTCCATTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| 3UTR TCA 90 bp | ACATGCTTGCTTGTTTCCCATCTTGCATCCACCATCAAGAACTCTTaGAGCCCTCTTCTTTGGATTCCGGTTTTGAAATGGACTCCGCCT | + |
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Preference number: 1 (lower is better) Translates to: TCLLVSHLASTIKNS*SPLLWIPVLKWTPP Trigger: AGGCGGAGTCCATTTCAAAACCGGAATCCAAAGAAGAGGGCTTCAAGAGTTCTTGATGGTGGATGCAAGATGGGAAACAAGCAAGCATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| 3UTR-3UTR CCA 90 bp | TGGACTCCGCCTTGGGGAAAGGTTCCCATTCCTCCCACCTTTGCTGCTCCACAGTTCTCCCCATCACCCTaGTCCTCTCCCCCTGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: WTPPWGKVPIPPTFAAPQFSPSP*SSPPAL Trigger: CAGAGCAGGGGGAGAGGACCAGGGTGATGGGGAGAA...CTGTGGAGCAGCAAAGGTGGGAGGAATGGGAACCTTTCCCCAAGGCGGAGTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| 3UTR CAA 90 bp | TTGAAGCCCTCTTCTTTGGATTCCGGTTTTGAAATGGACTCCGCCTaGGGGAAAGGTTCCCATTCCTCCCACCTTTGCTGCTCCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: LKPSSLDSGFEMDSA*GKGSHSSHLCCSTA Trigger: GGCTGTGGAGCAGCAAAGGTGGGAGGAATGGGAACCTTTCCCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAAAGAAGAGGGCTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| 3UTR-3UTR GCA 90 bp | AATAGGGCTGAAGCTTCATTTGCAGTTGGCTTGCCTGTGAGTCACATGTACTTGCTGGTCCTCTCCCCCTaGTCTGGTGGCTCTGGTTCG | + |
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Preference number: 2 (lower is better) Translates to: NRAEASFAVGLPVSHMYLLVLSP*SGGSGS Trigger: CGAACCAGAGCCACCAGAGCAGGGGGAGAGGACCAG...CAAGTACATGTGACTCACAGGCAAGCCAACTGCAAATGAAGCTTCAGCCCTATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| 3UTR-3UTR GCA 90 bp | AAGCCCTCTTCTTTGGATTCCGGTTTTGAAATGGACTCCGCCTTGGGGAAAGGTAGCAGCAATTCAAAATaGTGGAGGGAGGGTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: KPSSLDSGFEMDSALGKGSSNSK*WREGGQ Trigger: CTGCCCACCCTCCCTCCAGCATTTTGAATTGCTGCT...ACCTTTCCCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAAAGAAGAGGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| 3UTR-3UTR TCA 90 bp | GCTGAAGCTTCATTTGCAGTTGGCTTGCCTGTGAGTCACATGTACTTGGATAGCTTTGGATTCCGGTTTTaGAATGGACTCCGCCTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: AEASFAVGLPVSHMYLDSFGFRF*NGLRLG Trigger: CCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAAA...GCTATCCAAGTACATGTGACTCACAGGCAAGCCAACTGCAAATGAAGCTTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| 3UTR GCA 72 bp | TCCGCCTTGGGGAAAGGTTCCCATTCCTCCCACCTTTaGTGCTCCACAGCCACATGGATGGCTCTTCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: SALGKGSHSSHL*CSTATWMALLP Trigger: GGGGAGAAGAGCCATCCATGTGGCTGTGGAGCAGCAAAGGTGGGAGGAATGGGAACCTTTCCCCAAGGCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| 3UTR GCA 72 bp | GCCTTGGGGAAAGGTTCCCATTCCTCCCACCTTTGCTaGTCCACAGCCACATGGATGGCTCTTCTCCCCATC | + |
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Preference number: 3 (lower is better) Translates to: ALGKGSHSSHLC*STATWMALLPI Trigger: GATGGGGAGAAGAGCCATCCATGTGGCTGTGGAGCAGCAAAGGTGGGAGGAATGGGAACCTTTCCCCAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| 3UTR CCA 72 bp | CTTCTTTGGATTCCGGTTTTGAAATGGACTCCGCCTTaGGGAAAGGTTCCCATTCCTCCCACCTTTGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: LLWIPVLKWTPP*GKVPIPPTFAA Trigger: AGCAGCAAAGGTGGGAGGAATGGGAACCTTTCCCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| 3UTR-3UTR CAA 90 bp | AATAGGGCTGAAGCTTCATTTGCAGTTGGCTTGCCTGTGAGTCACATGTACTTGCCTGTGGCCACATGCTaGCTTGTTTCCCATCTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: NRAEASFAVGLPVSHMYLPVATC*LVSHLA Trigger: TGCAAGATGGGAAACAAGCAAGCATGTGGCCACAGG...CAAGTACATGTGACTCACAGGCAAGCCAACTGCAAATGAAGCTTCAGCCCTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| 3UTR-3UTR CAA 90 bp | GCTGAAGCTTCATTTGCAGTTGGCTTGCCTGTGAGTCACATGTACTTGGATAGCTGCTTGTTTCCCATCTaGCATCCACCATCAAGAACT | + |
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Preference number: 3 (lower is better) Translates to: AEASFAVGLPVSHMYLDSCLFPI*HPPSRT Trigger: AGTTCTTGATGGTGGATGCAAGATGGGAAACAAGCA...GCTATCCAAGTACATGTGACTCACAGGCAAGCCAACTGCAAATGAAGCTTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR GCA 90 bp | GAAATGGACTCCGCCTTGGGGAAAGGTTCCCATTCCTCCCACCTTTGCTGCTCCGGCTGCTGCTGCGGCTaGTGCTGCCAGGGAAGCACC | + |
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Preference number: 4 (lower is better) Translates to: EMDSALGKGSHSSHLCCSGCCCG*CCQGST Trigger: GGTGCTTCCCTGGCAGCAGCAGCCGCAGCAGCAGCC...GGAGCAGCAAAGGTGGGAGGAATGGGAACCTTTCCCCAAGGCGGAGTCCATTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR CCA 90 bp | TCTGGTTCGGCTGGCTGGAAAAGGAGCAGCAATTCAAAATGCTGGAGGGAGGGTCTGCGGCGTCTGGGCTaGCCATGCCCACGGCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SGSAGWKRSSNSKCWREGLRRLG*PCPRRS Trigger: GGACCGCCGTGGGCATGGCCAGCCCAGACGCCGCAG...ACCCTCCCTCCAGCATTTTGAATTGCTGCTCCTTTTCCAGCCAGCCGAACCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR GCA 90 bp | CCTTGGGGAAAGGTTCCCATTCCTCCCACCTTTGCTGCTCCACAGCCACATGGATGCTTCTGTTGCTCCTaGGGCTGCTGCTGCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PWGKVPIPPTFAAPQPHGCFCCS*GCCCGC Trigger: GCAGCCGCAGCAGCAGCCGCAGGAGCAACAGAAGCA...TCCATGTGGCTGTGGAGCAGCAAAGGTGGGAGGAATGGGAACCTTTCCCCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR GCA 90 bp | CCTTGGGGAAAGGTTCCCATTCCTCCCACCTTTGCTGCTCCACAGCCACATGGATGCGGCTGCAATGGCTaGTGCTGCTGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PWGKVPIPPTFAAPQPHGCGCNG*CCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCAGCCATTGCAGCCGCA...TCCATGTGGCTGTGGAGCAGCAAAGGTGGGAGGAATGGGAACCTTTCCCCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR GCA 90 bp | CCTTGGGGAAAGGTTCCCATTCCTCCCACCTTTGCTGCTCCACAGCCACATGGATGTCGCGGTGGCTGCTaGTGCCTCTGCTGCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PWGKVPIPPTFAAPQPHGCRGGC*CLCCCL Trigger: AAGGCAGCAGCAGAGGCAGCAGCAGCCACCGCGACA...TCCATGTGGCTGTGGAGCAGCAAAGGTGGGAGGAATGGGAACCTTTCCCCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR CCA 90 bp | CGGCTGGCTGGAAAAGGAGCAGCAATTCAAAATGCTGGAGGGAGGGTGGGCAGCCGCACAGTCTGCACGTaGGTATACAGGGCGCACACG | + |
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Preference number: 4 (lower is better) Translates to: RLAGKGAAIQNAGGRVGSRTVCT*VYRAHT Trigger: CGTGTGCGCCCTGTATACCCACGTGCAGACTGTGCG...GCTGCCCACCCTCCCTCCAGCATTTTGAATTGCTGCTCCTTTTCCAGCCAGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR CCA 90 bp | TCCTCTCCCCCTGCTCTGGTGGCTCTGGTTCGGCTGGCTGGAAAAGGAGCAGCAAGCGCAGGTCTGTGTTaGAGGCCATCTCAAAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SSPPALVALVRLAGKGAASAGLC*RPSQRR Trigger: CCTCCTTTGAGATGGCCTCCAACACAGACCTGCGCT...TGCTGCTCCTTTTCCAGCCAGCCGAACCAGAGCCACCAGAGCAGGGGGAGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR GCA 90 bp | CTCTGGTTCGGCTGGCTGGAAAAGGAGCAGCAATTCAAAATGCTGGAGGGAGGGGCCAGCACACTCCTGTaGTCTCCTCTGCGGCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LWFGWLEKEQQFKMLEGGASTLL*SPLRRL Trigger: CAGACGCCGCAGAGGAGAGCACAGGAGTGTGCTGGC...CCCTCCCTCCAGCATTTTGAATTGCTGCTCCTTTTCCAGCCAGCCGAACCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR GCA 90 bp | AGCCCTCTTCTTTGGATTCCGGTTTTGAAATGGACTCCGCCTTGGGGAAAGGTTGGCTGCGGCTGCGGCTaGAACGGCTGCAACGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPLLWIPVLKWTPPWGKVGCGCG*NGCNGC Trigger: GCAGCCGTTGCAGCCGTTGCAGCCGCAGCCGCAGCC...AACCTTTCCCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAAAGAAGAGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR GCA 90 bp | CCTTGGGGAAAGGTTCCCATTCCTCCCACCTTTGCTGCTCCACAGCCACATGGAGGCTGTTGTTTCTGCTaGTGTCGCGGTGGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PWGKVPIPPTFAAPQPHGGCCFC*CRGGCC Trigger: GCAGCAGCCACCGCGACAGCAGCAGAAACAACAGCC...TCCATGTGGCTGTGGAGCAGCAAAGGTGGGAGGAATGGGAACCTTTCCCCAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR CCA 90 bp | GAAATGGACTCCGCCTTGGGGAAAGGTTCCCATTCCTCCCACCTTTGCTGCTCCGCACACGCTCTCAGGTaGAGTCTCCTGCTGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: EMDSALGKGSHSSHLCCSAHALR*SLLLLL Trigger: GAGGAGCAGCAGGAGACTCCACCTGAGAGCGTGTGC...GGAGCAGCAAAGGTGGGAGGAATGGGAACCTTTCCCCAAGGCGGAGTCCATTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR CCA 90 bp | CGGCTGGCTGGAAAAGGAGCAGCAATTCAAAATGCTGGAGGGAGGGTGGGCAGCACACAGCGCAAGCCATaGTTGGTGGTGACCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: RLAGKGAAIQNAGGRVGSTQRKP*LVVTSQ Trigger: CTGGCTGGTCACCACCAACCATGGCTTGCGCTGTGT...GCTGCCCACCCTCCCTCCAGCATTTTGAATTGCTGCTCCTTTTCCAGCCAGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR CCA 90 bp | CTCTGGTTCGGCTGGCTGGAAAAGGAGCAGCAATTCAAAATGCTGGAGGGAGGGATGCCATGCTGGGCGTaGTCCAGCAGAGCCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LWFGWLEKEQQFKMLEGGMPCWA*SSRASS Trigger: GCTGGAGGCTCTGCTGGACCACGCCCAGCATGGCAT...CCCTCCCTCCAGCATTTTGAATTGCTGCTCCTTTTCCAGCCAGCCGAACCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR TCA 90 bp | CTCTGGTTCGGCTGGCTGGAAAAGGAGCAGCAATTCAAAATGCTGGAGGGAGGGGGAGGACGACTGGGATaGTGGAGAGCTGCTCCAACC | + |
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Preference number: 4 (lower is better) Translates to: LWFGWLEKEQQFKMLEGGGGRLG*WRAAPT Trigger: GGTTGGAGCAGCTCTCCATCATCCCAGTCGTCCTCC...CCCTCCCTCCAGCATTTTGAATTGCTGCTCCTTTTCCAGCCAGCCGAACCAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR GCA 90 bp | CGGCTGGCTGGAAAAGGAGCAGCAATTCAAAATGCTGGAGGGAGGGTGGGCAGCGGTGGAGTCTCCTGCTaGTCCTCAGATTTGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: RLAGKGAAIQNAGGRVGSGGVSC*SSDLLE Trigger: CTCCAGCAAATCTGAGGAGCAGCAGGAGACTCCACC...GCTGCCCACCCTCCCTCCAGCATTTTGAATTGCTGCTCCTTTTCCAGCCAGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR GCA 90 bp | TTGGATTCCGGTTTTGAAATGGACTCCGCCTTGGGGAAAGGTTCCCATTCCTCCACCCAGCACCCCCTGTaGCCGGGCTGCCAAGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: LDSGFEMDSALGKGSHSSTQHPL*PGCQVD Trigger: ATCTACTTGGCAGCCCGGGCACAGGGGGTGCTGGGT...GGAGGAATGGGAACCTTTCCCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR CCA 90 bp | TCTGGTTCGGCTGGCTGGAAAAGGAGCAGCAATTCAAAATGCTGGAGGGAGGGTTCTTGGATGCCATGCTaGGCGTGGTCCAGCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: SGSAGWKRSSNSKCWREGSWMPC*AWSSRA Trigger: GGCTCTGCTGGACCACGCCCAGCATGGCATCCAAGA...ACCCTCCCTCCAGCATTTTGAATTGCTGCTCCTTTTCCAGCCAGCCGAACCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR CCA 90 bp | TTGGATTCCGGTTTTGAAATGGACTCCGCCTTGGGGAAAGGTTCCCATTCCTCCCGGCTGCTGCTTCAGTaGCTGCGGCTGCAATGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LDSGFEMDSALGKGSHSSRLLLQ*LRLQWL Trigger: CAGCCATTGCAGCCGCAGCCACTGAAGCAGCAGCCG...GGAGGAATGGGAACCTTTCCCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR GCA 90 bp | AGCCCTCTTCTTTGGATTCCGGTTTTGAAATGGACTCCGCCTTGGGGAAAGGTTAGTCTCCCAAGCCACTaGCACGCCGCGCACAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SPLLWIPVLKWTPPWGKVSLPSH*HAAHSL Trigger: CAGACTGTGCGCGGCGTGGCAGTGGCTTGGGAGACT...AACCTTTCCCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAAAGAAGAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR GCA 90 bp | TTGGATTCCGGTTTTGAAATGGACTCCGCCTTGGGGAAAGGTTCCCATTCCTCCGCGGGCAGTAGTGCTTaGAGTCTTCCAGCTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LDSGFEMDSALGKGSHSSAGSSA*SLPAPS Trigger: GCTGGGAGCTGGAAGACTGCAAGCACTACTGCCCGC...GGAGGAATGGGAACCTTTCCCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR GCA 90 bp | AATAGGGCTGAAGCTTCATTTGCAGTTGGCTTGCCTGTGAGTCACATGTACTTGGGCTGTGGCTGCGGCTaGGGCTGCAACGGCTGCAAC | + |
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Preference number: 4 (lower is better) Translates to: NRAEASFAVGLPVSHMYLGCGCG*GCNGCN Trigger: GTTGCAGCCGTTGCAGCCGCAGCCGCAGCCACAGCC...CAAGTACATGTGACTCACAGGCAAGCCAACTGCAAATGAAGCTTCAGCCCTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR GCA 90 bp | CTCTGGTTCGGCTGGCTGGAAAAGGAGCAGCAATTCAAAATGCTGGAGGGAGGGTGCTGCCTCTGCTGCTaGCTTTGCTGCTGCTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: LWFGWLEKEQQFKMLEGGCCLCC*LCCCFC Trigger: ACAGAAGCAGCAGCAAAGGCAGCAGCAGAGGCAGCA...CCCTCCCTCCAGCATTTTGAATTGCTGCTCCTTTTCCAGCCAGCCGAACCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR CCA 90 bp | CCTTGGGGAAAGGTTCCCATTCCTCCCACCTTTGCTGCTCCACAGCCACATGGAGGGCTTCCTGGTGACTaGCTCAAAGCCATCATCAGT | + |
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Preference number: 4 (lower is better) Translates to: PWGKVPIPPTFAAPQPHGGLPGD*LKAIIS Trigger: ACTGATGATGGCTTTGAGCCAGTCACCAGGAAGCCC...TCCATGTGGCTGTGGAGCAGCAAAGGTGGGAGGAATGGGAACCTTTCCCCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR GCA 90 bp | CTTTGGATTCCGGTTTTGAAATGGACTCCGCCTTGGGGAAAGGTTCCCATTCCTGGGATGATGGAGAGCTaGTCCAACCCAGCACCCCCT | + |
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Preference number: 4 (lower is better) Translates to: LWIPVLKWTPPWGKVPIPGMMES*SNPAPP Trigger: AGGGGGTGCTGGGTTGGAGCAGCTCTCCATCATCCC...AGGAATGGGAACCTTTCCCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR GCA 90 bp | AAGCCCTCTTCTTTGGATTCCGGTTTTGAAATGGACTCCGCCTTGGGGAAAGGTTGCTGCGGCTGCTGCTaGCAGGGAAGCACCTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: KPSSLDSGFEMDSALGKGCCGCC*QGSTLV Trigger: AACCAAGGTGCTTCCCTGGCAGCAGCAGCCGCAGCA...ACCTTTCCCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAAAGAAGAGGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR GCA 90 bp | AGCCCTCTTCTTTGGATTCCGGTTTTGAAATGGACTCCGCCTTGGGGAAAGGTTTGCTGCTTCAGTGGCTaGGGCTGCAATGGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SPLLWIPVLKWTPPWGKVCCFSG*GCNGCC Trigger: GCAGCAGCCATTGCAGCCGCAGCCACTGAAGCAGCA...AACCTTTCCCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAAAGAAGAGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR GCA 90 bp | AATAGGGCTGAAGCTTCATTTGCAGTTGGCTTGCCTGTGAGTCACATGTACTTGTGCTGTCGCGGTGGCTaGTGCTGCCTCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: NRAEASFAVGLPVSHMYLCCRGG*CCLCCC Trigger: GCAGCAGCAGAGGCAGCAGCAGCCACCGCGACAGCA...CAAGTACATGTGACTCACAGGCAAGCCAACTGCAAATGAAGCTTCAGCCCTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR GCA 90 bp | CGGCTGGCTGGAAAAGGAGCAGCAATTCAAAATGCTGGAGGGAGGGTGGGCAGCTACTTTCCCTGTTGCTaGAGTGGCTGTTGTTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: RLAGKGAAIQNAGGRVGSYFPCC*SGCCFC Trigger: GCAGAAACAACAGCCACTGCAGCAACAGGGAAAGTA...GCTGCCCACCCTCCCTCCAGCATTTTGAATTGCTGCTCCTTTTCCAGCCAGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR TCA 90 bp | TGGACTCCGCCTTGGGGAAAGGTTCCCATTCCTCCCACCTTTGCTGCTCCACAGAGAATATTTGGCAGCTaGAGCCATCTTGGATGCCAT | + |
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Preference number: 4 (lower is better) Translates to: WTPPWGKVPIPPTFAAPQRIFGS*SHLGCH Trigger: ATGGCATCCAAGATGGCTTCAGCTGCCAAATATTCT...CTGTGGAGCAGCAAAGGTGGGAGGAATGGGAACCTTTCCCCAAGGCGGAGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR GCA 90 bp | GCTGAAGCTTCATTTGCAGTTGGCTTGCCTGTGAGTCACATGTACTTGGATAGCTGCTCCTGCTGCCGCTaGTTCTGCTGTTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: AEASFAVGLPVSHMYLDSCSCCR*FCCCCC Trigger: GCAGCAGCAACAGCAGAAGCAGCGGCAGCAGGAGCA...GCTATCCAAGTACATGTGACTCACAGGCAAGCCAACTGCAAATGAAGCTTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR GCA 90 bp | AGCCCTCTTCTTTGGATTCCGGTTTTGAAATGGACTCCGCCTTGGGGAAAGGTTTGCTGCCTTTGCTGCTaGTTCTGTGGCTGTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SPLLWIPVLKWTPPWGKVCCLCC*FCGCGC Trigger: GCAGCCACAGCCACAGAAGCAGCAGCAAAGGCAGCA...AACCTTTCCCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAAAGAAGAGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR GCA 90 bp | CTTTGGATTCCGGTTTTGAAATGGACTCCGCCTTGGGGAAAGGTTCCCATTCCTTGCTGCTGCCTCTGCTaGTGCCTTTGCTGCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LWIPVLKWTPPWGKVPIPCCCLC*CLCCCF Trigger: GAAGCAGCAGCAAAGGCAGCAGCAGAGGCAGCAGCA...AGGAATGGGAACCTTTCCCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR CCA 90 bp | AAGCCCTCTTCTTTGGATTCCGGTTTTGAAATGGACTCCGCCTTGGGGAAAGGTACTCATTCCTCCTCATaGCCCCACCTGGCCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: KPSSLDSGFEMDSALGKGTHSSS*PHLAST Trigger: TGTGCTGGCCAGGTGGGGCCATGAGGAGGAATGAGT...ACCTTTCCCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAAAGAAGAGGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS-3UTR CCA 90 bp | TCTGGTTCGGCTGGCTGGAAAAGGAGCAGCAATTCAAAATGCTGGAGGGAGGGTGCTCCTCAGATTTGCTaGAGTCCCAGGACTGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SGSAGWKRSSNSKCWREGAPQIC*SPRTGT Trigger: AGTACCAGTCCTGGGACTCCAGCAAATCTGAGGAGC...ACCCTCCCTCCAGCATTTTGAATTGCTGCTCCTTTTCCAGCCAGCCGAACCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS-3UTR GCA 90 bp | CTTTGGATTCCGGTTTTGAAATGGACTCCGCCTTGGGGAAAGGTTCCCATTCCTCTCTGCTGCTGCCTTTaGTGCTGCTTCTGTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LWIPVLKWTPPWGKVPIPLCCCL*CCFCGC Trigger: ACAGCCACAGAAGCAGCAGCAAAGGCAGCAGCAGAG...AGGAATGGGAACCTTTCCCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS-3UTR GCA 90 bp | AGCCCTCTTCTTTGGATTCCGGTTTTGAAATGGACTCCGCCTTGGGGAAAGGTTTCAGGTGGAGTCTCCTaGTGCTCCTCAGATTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPLLWIPVLKWTPPWGKVSGGVS*CSSDLL Trigger: CAGCAAATCTGAGGAGCAGCAGGAGACTCCACCTGA...AACCTTTCCCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAAAGAAGAGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS-3UTR GCA 90 bp | AATAGGGCTGAAGCTTCATTTGCAGTTGGCTTGCCTGTGAGTCACATGTACTTGTGCTGCTGCCTTTGCTaGTGCTTCTGTGGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NRAEASFAVGLPVSHMYLCCCLC*CFCGCG Trigger: GCCACAGCCACAGAAGCAGCAGCAAAGGCAGCAGCA...CAAGTACATGTGACTCACAGGCAAGCCAACTGCAAATGAAGCTTCAGCCCTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| 3UTR CAA 72 bp | TCTTCTTTGGATTCCGGTTTTGAAATGGACTCCGCCTaGGGGAAAGGTTCCCATTCCTCCCACCTTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLDSGFEMDSA*GKGSHSSHLCC Trigger: GCAGCAAAGGTGGGAGGAATGGGAACCTTTCCCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAAAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| 3UTR CAA 72 bp | TCATTTGCAGTTGGCTTGCCTGTGAGTCACATGTACTaGGATAGCAAGTGTGGACTACTGCTGATCCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SFAVGLPVSHMY*DSKCGLLLILP Trigger: CGGAAGGATCAGCAGTAGTCCACACTTGCTATCCAAGTACATGTGACTCACAGGCAAGCCAACTGCAAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS-3UTR GCA 90 bp | GCTGAAGCTTCATTTGCAGTTGGCTTGCCTGTGAGTCACATGTACTTGGATAGCGTCTGTTCTCCCCTATaGTCAATGAGATGGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AEASFAVGLPVSHMYLDSVCSPL*SMRWCF Trigger: GAAACACCATCTCATTGAGCATAGGGGAGAACAGAC...GCTATCCAAGTACATGTGACTCACAGGCAAGCCAACTGCAAATGAAGCTTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS GCA 90 bp | CCTCCTCATGGCCCCACCTGGCCAGCACACTCCTGTGCTCTCCTCTaGGGCGTCTGGGCTGGCCATGCCCACGGCGGTCCCAGGTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PPHGPTWPAHSCALL*GVWAGHAHGGPRCL Trigger: CAGACACCTGGGACCGCCGTGGGCATGGCCAGCCCAGACGCCGCAGAGGAGAGCACAGGAGTGTGCTGGCCAGGTGGGGCCATGAGGAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS CCA 90 bp | GGCCCCACCTGGCCAGCACACTCCTGTGCTCTCCTCTGCGGCGTCTaGGCTGGCCATGCCCACGGCGGTCCCAGGTGTCTGTTCTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GPTWPAHSCALLCGV*AGHAHGGPRCLFSP Trigger: AGGGGAGAACAGACACCTGGGACCGCCGTGGGCATGGCCAGCCCAGACGCCGCAGAGGAGAGCACAGGAGTGTGCTGGCCAGGTGGGGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS GCA 90 bp | ATGACTCATTCCTCCTCATGGCCCCACCTGGCCAGCACACTCCTGTaGTCTCCTCTGCGGCGTCTGGGCTGGCCATGCCCACGGCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: MTHSSSWPHLASTLL*SPLRRLGWPCPRRS Trigger: GGACCGCCGTGGGCATGGCCAGCCCAGACGCCGCAGAGGAGAGCACAGGAGTGTGCTGGCCAGGTGGGGCCATGAGGAGGAATGAGTCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS CCA 90 bp | CACCTGGCCAGCACACTCCTGTGCTCTCCTCTGCGGCGTCTGGGCTaGCCATGCCCACGGCGGTCCCAGGTGTCTGTTCTCCCCTATGCT | + |
|
Preference number: 5 (lower is better) Translates to: HLASTLLCSPLRRLG*PCPRRSQVSVLPYA Trigger: AGCATAGGGGAGAACAGACACCTGGGACCGCCGTGGGCATGGCCAGCCCAGACGCCGCAGAGGAGAGCACAGGAGTGTGCTGGCCAGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS CCA 90 bp | TCATCAGTCTCCCAAGCCACTGCCACGCCGCGCACAGTCTGCACGTaGGTATACAGGGCGCACACGCTCTCAGGTGGAGTCTCCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSVSQATATPRTVCT*VYRAHTLSGGVSCC Trigger: GCAGCAGGAGACTCCACCTGAGAGCGTGTGCGCCCTGTATACCCACGTGCAGACTGTGCGCGGCGTGGCAGTGGCTTGGGAGACTGATGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS TCA 90 bp | GTAGATGTCATCGTCAGGGAGGAAGGCAGGCCCTGGCCGCGGAGATaGCTCATTCCTCCTCATGGCCCCACCTGGCCAGCACACTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VDVIVREEGRPWPRR*LIPPHGPTWPAHSC Trigger: ACAGGAGTGTGCTGGCCAGGTGGGGCCATGAGGAGGAATGAGTCATCTCCGCGGCCAGGGCCTGCCTTCCTCCCTGACGATGACATCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS TCA 90 bp | GGAAGACTCTGCAGCAGGCCACACAGCGCAAGCCATGGTTGGTGGTaGCCAGCCAGTCTGGTGGTGCTCGTAGCTCCTGCATGCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GRLCSRPHSASHGWW*PASLVVLVAPACSS Trigger: ACTGCTGCATGCAGGAGCTACGAGCACCACCAGACTGGCTGGTCACCACCAACCATGGCTTGCGCTGTGTGGCCTGCTGCAGAGTCTTCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS GCA 90 bp | GCATGCAGCAGTCCACAGGGTCCTCAGTCTGCGGGCAGTAGTGCTTaGAGTCTTCCAGCTCCCAGCGCAGGTCTGTGTTGGAGGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: ACSSPQGPQSAGSSA*SLPAPSAGLCWRPS Trigger: AGATGGCCTCCAACACAGACCTGCGCTGGGAGCTGGAAGACTGCAAGCACTACTGCCCGCAGACTGAGGACCCTGTGGACTGCTGCATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS GCA 90 bp | TGCTGCTGCTGCTTCTGTTGCTCCTGCGGCTGCTGCTGCGGCTGCTaGTGCCAGGGAAGCACCTTGGTTAGGAGCCTGGTACATTCACTA | + |
|
Preference number: 5 (lower is better) Translates to: CCCCFCCSCGCCCGC*CQGSTLVRSLVHSL Trigger: TAGTGAATGTACCAGGCTCCTAACCAAGGTGCTTCCCTGGCAGCAGCAGCCGCAGCAGCAGCCGCAGGAGCAACAGAAGCAGCAGCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS CCA 90 bp | ACGCTTGATGAACTCAGCCTCCCGGATAAGGGGCTTCCTGGTGACTaGCTCAAAGCCATCATCAGTCTCCCAAGCCACTGCCACGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: TLDELSLPDKGLPGD*LKAIISLPSHCHAA Trigger: CGCGGCGTGGCAGTGGCTTGGGAGACTGATGATGGCTTTGAGCCAGTCACCAGGAAGCCCCTTATCCGGGAGGCTGAGTTCATCAAGCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS TCA 90 bp | AGGTCTGTGTTGGAGGCCATCTCAAAGGAGGAGCCTTTCCGCCGCTaGCGCTTGATGAACTCAGCCTCCCGGATAAGGGGCTTCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSVLEAISKEEPFRR*RLMNSASRIRGFLV Trigger: CACCAGGAAGCCCCTTATCCGGGAGGCTGAGTTCATCAAGCGTCAGCGGCGGAAAGGCTCCTCCTTTGAGATGGCCTCCAACACAGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS-3UTR CAA 90 bp | GAAATGGACTCCGCCTTGGGGAAAGGTTCCCATTCCTCCCACCTTTGCTGCTCCTGCTGCTCCTCAGATTaGCTGGAGTCCCAGGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: EMDSALGKGSHSSHLCCSCCSSD*LESQDW Trigger: CCAGTCCTGGGACTCCAGCAAATCTGAGGAGCAGCA...GGAGCAGCAAAGGTGGGAGGAATGGGAACCTTTCCCCAAGGCGGAGTCCATTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS TCA 90 bp | GGGTCCGCTTCCTTTCCAGCATCTCCTCGAAGAATATTTGGCAGCTaGAGCCATCTTGGATGCCATGCTGGGCGTGGTCCAGCAGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GSASFPASPRRIFGS*SHLGCHAGRGPAEP Trigger: AGGCTCTGCTGGACCACGCCCAGCATGGCATCCAAGATGGCTTCAGCTGCCAAATATTCTTCGAGGAGATGCTGGAAAGGAAGCGGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS CCA 90 bp | CTTTCCAGCATCTCCTCGAAGAATATTTGGCAGCTGAAGCCATCTTaGATGCCATGCTGGGCGTGGTCCAGCAGAGCCTCCAGCGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSSISSKNIWQLKPS*MPCWAWSSRASSVG Trigger: CCCTACGCTGGAGGCTCTGCTGGACCACGCCCAGCATGGCATCCAAGATGGCTTCAGCTGCCAAATATTCTTCGAGGAGATGCTGGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS-3UTR CAA 90 bp | CTCTGGTTCGGCTGGCTGGAAAAGGAGCAGCAATTCAAAATGCTGGAGGGAGGGTTGCTGCAGTGGCTGTaGTTTCTGCTGCTGTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LWFGWLEKEQQFKMLEGGLLQWL*FLLLSR Trigger: CCGCGACAGCAGCAGAAACAACAGCCACTGCAGCAA...CCCTCCCTCCAGCATTTTGAATTGCTGCTCCTTTTCCAGCCAGCCGAACCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS-3UTR CAA 90 bp | AGCCCTCTTCTTTGGATTCCGGTTTTGAAATGGACTCCGCCTTGGGGAAAGGTTCAGCGCAAGCCATGGTaGGTGGTGACCAGCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPLLWIPVLKWTPPWGKVQRKPW*VVTSQS Trigger: AGACTGGCTGGTCACCACCAACCATGGCTTGCGCTG...AACCTTTCCCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAAAGAAGAGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS TCA 90 bp | TCCGAAAGGCTCTGCTCCTCTTCTACAGGCTGTTGGTCCTGCTTTTaGTCCCGGGTCCGCTTCCTTTCCAGCATCTCCTCGAAGAATATT | + |
|
Preference number: 5 (lower is better) Translates to: SERLCSSSTGCWSCF*SRVRFLSSISSKNI Trigger: AATATTCTTCGAGGAGATGCTGGAAAGGAAGCGGACCCGGGATCAAAAGCAGGACCAACAGCCTGTAGAAGAGGAGCAGAGCCTTTCGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS-3UTR CAA 90 bp | AAGCCCTCTTCTTTGGATTCCGGTTTTGAAATGGACTCCGCCTTGGGGAAAGGTTGCCAGGGAAGCACCTaGGTTAGGAGCCTGGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: KPSSLDSGFEMDSALGKGCQGST*VRSLVH Trigger: ATGTACCAGGCTCCTAACCAAGGTGCTTCCCTGGCA...ACCTTTCCCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAAAGAAGAGGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS-3UTR CAA 90 bp | AAGCCCTCTTCTTTGGATTCCGGTTTTGAAATGGACTCCGCCTTGGGGAAAGGTCTCTTCTACAGGCTGTaGGTCCTGCTTTTGATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: KPSSLDSGFEMDSALGKGLFYRL*VLLLIP Trigger: CGGGATCAAAAGCAGGACCAACAGCCTGTAGAAGAG...ACCTTTCCCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAAAGAAGAGGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS GCA 72 bp | GGCCCCACCTGGCCAGCACACTCCTGTGCTCTCCTCTaGGGCGTCTGGGCTGGCCATGCCCACGGCGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GPTWPAHSCALL*GVWAGHAHGGP Trigger: GGGACCGCCGTGGGCATGGCCAGCCCAGACGCCGCAGAGGAGAGCACAGGAGTGTGCTGGCCAGGTGGGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS CCA 72 bp | TGGCCAGCACACTCCTGTGCTCTCCTCTGCGGCGTCTaGGCTGGCCATGCCCACGGCGGTCCCAGGTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: WPAHSCALLCGV*AGHAHGGPRCL Trigger: CAGACACCTGGGACCGCCGTGGGCATGGCCAGCCCAGACGCCGCAGAGGAGAGCACAGGAGTGTGCTGGCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS GCA 72 bp | CTCCTGTGCTCTCCTCTGCGGCGTCTGGGCTGGCCATaGCCACGGCGGTCCCAGGTGTCTGTTCTCCCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: LLCSPLRRLGWP*PRRSQVSVLPY Trigger: ATAGGGGAGAACAGACACCTGGGACCGCCGTGGGCATGGCCAGCCCAGACGCCGCAGAGGAGAGCACAGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS CCA 72 bp | AGCACACTCCTGTGCTCTCCTCTGCGGCGTCTGGGCTaGCCATGCCCACGGCGGTCCCAGGTGTCTGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: STLLCSPLRRLG*PCPRRSQVSVL Trigger: GAGAACAGACACCTGGGACCGCCGTGGGCATGGCCAGCCCAGACGCCGCAGAGGAGAGCACAGGAGTGTGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS TCA 72 bp | ATCGTCAGGGAGGAAGGCAGGCCCTGGCCGCGGAGATaGCTCATTCCTCCTCATGGCCCCACCTGGCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: IVREEGRPWPRR*LIPPHGPTWPA Trigger: TGCTGGCCAGGTGGGGCCATGAGGAGGAATGAGTCATCTCCGCGGCCAGGGCCTGCCTTCCTCCCTGACGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS CCA 72 bp | CAGGCCCTGGCCGCGGAGATGACTCATTCCTCCTCATaGCCCCACCTGGCCAGCACACTCCTGTGCTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: QALAAEMTHSSS*PHLASTLLCSP Trigger: AGGAGAGCACAGGAGTGTGCTGGCCAGGTGGGGCCATGAGGAGGAATGAGTCATCTCCGCGGCCAGGGCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS CCA 72 bp | TCCCAAGCCACTGCCACGCCGCGCACAGTCTGCACGTaGGTATACAGGGCGCACACGCTCTCAGGTGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SQATATPRTVCT*VYRAHTLSGGV Trigger: GACTCCACCTGAGAGCGTGTGCGCCCTGTATACCCACGTGCAGACTGTGCGCGGCGTGGCAGTGGCTTGGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS GCA 72 bp | AGAGCTGCTCCAACCCAGCACCCCCTGTGCCCGGGCTaGCAAGTAGATGTCATCGTCAGGGAGGAAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RAAPTQHPLCPG*QVDVIVREEGR Trigger: CCTGCCTTCCTCCCTGACGATGACATCTACTTGGCAGCCCGGGCACAGGGGGTGCTGGGTTGGAGCAGCTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS GCA 72 bp | ACTGATACTCGGAGGACGACTGGGATGATGGAGAGCTaGTCCAACCCAGCACCCCCTGTGCCCGGGCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TDTRRTTGMMES*SNPAPPVPGLP Trigger: TGGCAGCCCGGGCACAGGGGGTGCTGGGTTGGAGCAGCTCTCCATCATCCCAGTCGTCCTCCGAGTATCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS GCA 72 bp | GTGGTGACCAGCCAGTCTGGTGGTGCTCGTAGCTCCTaGATGCAGCAGTCCACAGGGTCCTCAGTCTGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: VVTSQSGGARSS*MQQSTGSSVCG Trigger: CCCGCAGACTGAGGACCCTGTGGACTGCTGCATGCAGGAGCTACGAGCACCACCAGACTGGCTGGTCACCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS TCA 72 bp | TGCAGCAGGCCACACAGCGCAAGCCATGGTTGGTGGTaGCCAGCCAGTCTGGTGGTGCTCGTAGCTCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: CSRPHSASHGWW*PASLVVLVAPA Trigger: TGCAGGAGCTACGAGCACCACCAGACTGGCTGGTCACCACCAACCATGGCTTGCGCTGTGTGGCCTGCTGCA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS CAA 90 bp | AGCGTAGGGAAGACTCTGCAGCAGGCCACACAGCGCAAGCCATGGTaGGTGGTGACCAGCCAGTCTGGTGGTGCTCGTAGCTCCTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: SVGKTLQQATQRKPW*VVTSQSGGARSSCM Trigger: CATGCAGGAGCTACGAGCACCACCAGACTGGCTGGTCACCACCAACCATGGCTTGCGCTGTGTGGCCTGCTGCAGAGTCTTCCCTACGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS GCA 72 bp | AGTCCACAGGGTCCTCAGTCTGCGGGCAGTAGTGCTTaGAGTCTTCCAGCTCCCAGCGCAGGTCTGTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SPQGPQSAGSSA*SLPAPSAGLCW Trigger: CCAACACAGACCTGCGCTGGGAGCTGGAAGACTGCAAGCACTACTGCCCGCAGACTGAGGACCCTGTGGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS GCA 72 bp | TTCTGTTGCTCCTGCGGCTGCTGCTGCGGCTGCTGCTaGCAGGGAAGCACCTTGGTTAGGAGCCTGGTACAT | + |
|
Preference number: 6 (lower is better) Translates to: FCCSCGCCCGCC*QGSTLVRSLVH Trigger: ATGTACCAGGCTCCTAACCAAGGTGCTTCCCTGGCAGCAGCAGCCGCAGCAGCAGCCGCAGGAGCAACAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS CCA 72 bp | TGGCAGCTGAAGCCATCTTGGATGCCATGCTGGGCGTaGTCCAGCAGAGCCTCCAGCGTAGGGAAGACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: WQLKPSWMPCWA*SSRASSVGKTL Trigger: CAGAGTCTTCCCTACGCTGGAGGCTCTGCTGGACCACGCCCAGCATGGCATCCAAGATGGCTTCAGCTGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS TCA 72 bp | TTGGAGGCCATCTCAAAGGAGGAGCCTTTCCGCCGCTaGCGCTTGATGAACTCAGCCTCCCGGATAAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LEAISKEEPFRR*RLMNSASRIRG Trigger: GCCCCTTATCCGGGAGGCTGAGTTCATCAAGCGTCAGCGGCGGAAAGGCTCCTCCTTTGAGATGGCCTCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS GCA 72 bp | TACAGGGCGCACACGCTCTCAGGTGGAGTCTCCTGCTaGTCCTCAGATTTGCTGGAGTCCCAGGACTGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: YRAHTLSGGVSC*SSDLLESQDWY Trigger: GTACCAGTCCTGGGACTCCAGCAAATCTGAGGAGCAGCAGGAGACTCCACCTGAGAGCGTGTGCGCCCTGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS GCA 72 bp | GTATACAGGGCGCACACGCTCTCAGGTGGAGTCTCCTaGTGCTCCTCAGATTTGCTGGAGTCCCAGGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: VYRAHTLSGGVS*CSSDLLESQDW Trigger: CCAGTCCTGGGACTCCAGCAAATCTGAGGAGCAGCAGGAGACTCCACCTGAGAGCGTGTGCGCCCTGTATAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS GCA 72 bp | GACTGGCTCAAAGCCATCATCAGTCTCCCAAGCCACTaGCACGCCGCGCACAGTCTGCACGTGGGTATACAG | + |
|
Preference number: 6 (lower is better) Translates to: DWLKAIISLPSH*HAAHSLHVGIQ Trigger: CTGTATACCCACGTGCAGACTGTGCGCGGCGTGGCAGTGGCTTGGGAGACTGATGATGGCTTTGAGCCAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS CCA 72 bp | CTGCACGTGGGTATACAGGGCGCACACGCTCTCAGGTaGAGTCTCCTGCTGCTCCTCAGATTTGCTGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LHVGIQGAHALR*SLLLLLRFAGV Trigger: GACTCCAGCAAATCTGAGGAGCAGCAGGAGACTCCACCTGAGAGCGTGTGCGCCCTGTATACCCACGTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS CAA 72 bp | GGCTGCTGCTGCGGCTGCTGCTGCCAGGGAAGCACCTaGGTTAGGAGCCTGGTACATTCACTACTGTCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: GCCCGCCCQGST*VRSLVHSLLSE Trigger: TTCGGACAGTAGTGAATGTACCAGGCTCCTAACCAAGGTGCTTCCCTGGCAGCAGCAGCCGCAGCAGCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS CAA 90 bp | CCTTTCCAGCATCTCCTCGAAGAATATTTGGCAGCTGAAGCCATCTaGGATGCCATGCTGGGCGTGGTCCAGCAGAGCCTCCAGCGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PFQHLLEEYLAAEAI*DAMLGVVQQSLQRR Trigger: CCTACGCTGGAGGCTCTGCTGGACCACGCCCAGCATGGCATCCAAGATGGCTTCAGCTGCCAAATATTCTTCGAGGAGATGCTGGAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
||
| CDS GCA 72 bp | CGCTCTCAGGTGGAGTCTCCTGCTGCTCCTCAGATTTaGTGGAGTCCCAGGACTGGTACTGAGAGTAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: RSQVESPAAPQI*WSPRTGTESRT Trigger: AGTCCTACTCTCAGTACCAGTCCTGGGACTCCAGCAAATCTGAGGAGCAGCAGGAGACTCCACCTGAGAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS CAA 72 bp | GCTCTGCTCCTCTTCTACAGGCTGTTGGTCCTGCTTTaGATCCCGGGTCCGCTTCCTTTCCAGCATCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: ALLLFYRLLVLL*IPGPLPFQHLL Trigger: GAGGAGATGCTGGAAAGGAAGCGGACCCGGGATCAAAAGCAGGACCAACAGCCTGTAGAAGAGGAGCAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS CAA 90 bp | TTGATCCCGGGTCCGCTTCCTTTCCAGCATCTCCTCGAAGAATATTaGGCAGCTGAAGCCATCTTGGATGCCATGCTGGGCGTGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LIPGPLPFQHLLEEY*AAEAILDAMLGVVQ Trigger: CTGGACCACGCCCAGCATGGCATCCAAGATGGCTTCAGCTGCCAAATATTCTTCGAGGAGATGCTGGAAAGGAAGCGGACCCGGGATCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS CAA 72 bp | ACTGTCCGAAAGGCTCTGCTCCTCTTCTACAGGCTGTaGGTCCTGCTTTTGATCCCGGGTCCGCTTCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: TVRKALLLFYRL*VLLLIPGPLPF Trigger: GAAAGGAAGCGGACCCGGGATCAAAAGCAGGACCAACAGCCTGTAGAAGAGGAGCAGAGCCTTTCGGACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS CCA 72 bp | GTCCGCTTCCTTTCCAGCATCTCCTCGAAGAATATTTaGCAGCTGAAGCCATCTTGGATGCCATGCTGGGCG | + |
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Preference number: 6 (lower is better) Translates to: VRFLSSISSKNI*QLKPSWMPCWA Trigger: CGCCCAGCATGGCATCCAAGATGGCTTCAGCTGCCAAATATTCTTCGAGGAGATGCTGGAAAGGAAGCGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS CAA 72 bp | GGTCCGCTTCCTTTCCAGCATCTCCTCGAAGAATATTaGGCAGCTGAAGCCATCTTGGATGCCATGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: GPLPFQHLLEEY*AAEAILDAMLG Trigger: GCCCAGCATGGCATCCAAGATGGCTTCAGCTGCCAAATATTCTTCGAGGAGATGCTGGAAAGGAAGCGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS CAA 90 bp | GTCCGAAAGGCTCTGCTCCTCTTCTACAGGCTGTTGGTCCTGCTTTaGATCCCGGGTCCGCTTCCTTTCCAGCATCTCCTCGAAGAATAT | + |
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Preference number: 6 (lower is better) Translates to: VRKALLLFYRLLVLL*IPGPLPFQHLLEEY Trigger: ATATTCTTCGAGGAGATGCTGGAAAGGAAGCGGACCCGGGATCAAAAGCAGGACCAACAGCCTGTAGAAGAGGAGCAGAGCCTTTCGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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| CDS CAA 90 bp | ACATTCACTACTGTCCGAAAGGCTCTGCTCCTCTTCTACAGGCTGTaGGTCCTGCTTTTGATCCCGGGTCCGCTTCCTTTCCAGCATCTC | + |
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Preference number: 6 (lower is better) Translates to: TFTTVRKALLLFYRL*VLLLIPGPLPFQHL Trigger: GAGATGCTGGAAAGGAAGCGGACCCGGGATCAAAAGCAGGACCAACAGCCTGTAGAAGAGGAGCAGAGCCTTTCGGACAGTAGTGAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000104926.3 |
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