Pregenerated sensors for FAM169A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041817Ensembl transcript IDs: ENSMUST00000042517.8, ENSMUST00000169863.9
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCTGCATGTCTTTAATCTCAACACTCAGCAGGAAGAGGCAGATCTaGGCTGGAGGTCTGCCTGGTTTACAGGATAGTCAATGCTACACA | + |
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Preference number: 1 (lower is better) Translates to: CCMSLISTLSRKRQI*AGGLPGLQDSQCYT Trigger: TGTGTAGCATTGACTATCCTGTAAACCAGGCAGACCTCCAGCTCAGATCTGCCTCTTCCTGCTGAGTGTTGAGATTAAAGACATGCAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| 3UTR CCA 90 bp | CATGACTTCTGTAACAGACCACGCCCAGAACCACCAGATTGCAAATaGACATCAAAGCAAAAGCTGCTCTCTTCAAATAGTTACATGAGT | + |
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Preference number: 1 (lower is better) Translates to: HDFCNRPRPEPPDCK*TSKQKLLSSNSYMS Trigger: ACTCATGTAACTATTTGAAGAGAGCAGCTTTTGCTTTGATGTCCATTTGCAATCTGGTGGTTCTGGGCGTGGTCTGTTACAGAAGTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169863.9 |
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| 3UTR TCA 90 bp | GATGCTCCACCTGCTGAAGAAGAATATGACCTGGAATTCCAAAATTaGCACATGGTTCATAAACGAAAGTTACTTAGAGAAAATAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: DAPPAEEEYDLEFQN*HMVHKRKLLRENSL Trigger: CAGGCTATTTTCTCTAAGTAACTTTCGTTTATGAACCATGTGTCAATTTTGGAATTCCAGGTCATATTCTTCTTCAGCAGGTGGAGCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| 3UTR GCA 90 bp | AGAGCACTCAAACAGCTGCTTGAAATCTCTGCAGTCCTCATGCCTTaGTACATTTGTTTAGATTCCCTACTGAACATAAATTATTACAAA | + |
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Preference number: 1 (lower is better) Translates to: RALKQLLEISAVLMP*YICLDSLLNINYYK Trigger: TTTGTAATAATTTATGTTCAGTAGGGAATCTAAACAAATGTAGCAAGGCATGAGGACTGCAGAGATTTCAAGCAGCTGTTTGAGTGCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| 3UTR-3UTR GCA 90 bp | GACCCAAAGGGACCGCAGAGTCAGAATCTAGGCATTTGTACATCTCACTGGGCAAGGGGCCTACACTTCTaGACTATCTGTGATCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: DPKGPQSQNLGICTSHWARGLHF*TICDQD Trigger: GTCCTGATCACAGATAGTGCAGAAGTGTAGGCCCCT...TGCCCAGTGAGATGTACAAATGCCTAGATTCTGACTCTGCGGTCCCTTTGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| 3UTR-3UTR GCA 90 bp | TTGGGGAGGGGCCTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATCTGTCCTGTGCCCCATaGTGTTTATTAATTACTGCA | + |
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Preference number: 2 (lower is better) Translates to: LGRGLHFCTICDQDDSPNLSCAP*CLLITA Trigger: TGCAGTAATTAATAAACAGCATGGGGCACAGGACAG...ATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAGGCCCCTCCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| 3UTR-3UTR TCA 90 bp | GTAGTGCTGCATGTCTTTAATCTCAACACTCAGCAGGAAGAGGCAGATCTGAGCAACAAGGAGGATGTGTaGACTGCATTGCTCCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: VVLHVFNLNTQQEEADLSNKEDV*TALLLH Trigger: ATGAAGGAGCAATGCAGTTCACACATCCTCCTTGTT...GCTCAGATCTGCCTCTTCCTGCTGAGTGTTGAGATTAAAGACATGCAGCACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| 3UTR-3UTR TCA 90 bp | GACCCAAAGGGACCGCAGAGTCAGAATCTAGGCATTTGTACATCTCACTGGGCACTGGAATTCCAAAATTaGCACATGGTTCATAAACGA | + |
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Preference number: 2 (lower is better) Translates to: DPKGPQSQNLGICTSHWALEFQN*HMVHKR Trigger: TCGTTTATGAACCATGTGTCAATTTTGGAATTCCAG...TGCCCAGTGAGATGTACAAATGCCTAGATTCTGACTCTGCGGTCCCTTTGGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| 3UTR-3UTR GCA 90 bp | TTGGGGAGGGGCCTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTTAGAATCTGTCCTGTaGCCCATGCTGTTTATTAAT | + |
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Preference number: 2 (lower is better) Translates to: LGRGLHFCTICDQDDSPNLESVL*PMLFIN Trigger: ATTAATAAACAGCATGGGGCACAGGACAGATTCTAA...ATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAGGCCCCTCCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| 3UTR CAA 90 bp | ACTGGGCAGCTTTATTCCTTCCATCTAGGACTAAAGGTGTTTGGATaGAGTTCTAGACCTATCCAAATATGGATACAGGGCATAACAGGC | + |
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Preference number: 2 (lower is better) Translates to: TGQLYSFHLGLKVFG*SSRPIQIWIQGITG Trigger: GCCTGTTATGCCCTGTATCCATATTTGGATAGGTCTAGAACTCAATCCAAACACCTTTAGTCCTAGATGGAAGGAATAAAGCTGCCCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| 3UTR-3UTR TCA 90 bp | AGTCAATGCTACACAGAGAAACCCTGTCTTAAAGTATACAAGACCCAAAGGGACAACAAGGAGGATGTGTaGACTGCATTGCTCCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: SQCYTEKPCLKVYKTQRDNKEDV*TALLLH Trigger: ATGAAGGAGCAATGCAGTTCACACATCCTCCTTGTT...GTCCCTTTGGGTCTTGTATACTTTAAGACAGGGTTTCTCTGTGTAGCATTGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| 3UTR CAA 90 bp | TTTAGAACATACAAAGATATTAAAGGAAAAGGCGGGCCTAGTTCCTaGGAAAGGACTGACCAGGAAAGGCAGAGTGACTTCACTTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: FRTYKDIKGKGGPSS*ERTDQERQSDFTFL Trigger: TAAGAAAGTGAAGTCACTCTGCCTTTCCTGGTCAGTCCTTTCCAAGGAACTAGGCCCGCCTTTTCCTTTAATATCTTTGTATGTTCTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169863.9 |
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| 3UTR-3UTR CCA 90 bp | GAAATCTCTGCAGTCCTCATGCCTTGCTACATTTGTTTAGATTCCCTACTGAACATTTGTACATCTCACTaGGCAGCTTTATTCCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: EISAVLMPCYICLDSLLNICTSH*AALFLP Trigger: TGGAAGGAATAAAGCTGCCCAGTGAGATGTACAAAT...GTTCAGTAGGGAATCTAAACAAATGTAGCAAGGCATGAGGACTGCAGAGATTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| 3UTR-3UTR CCA 90 bp | GAAATCTCTGCAGTCCTCATGCCTTGCTACATTTGTTTAGATTCCCTACTGAACACAAATCAAAGTATGTaGTATTCCCCAAGTGCCACT | + |
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Preference number: 2 (lower is better) Translates to: EISAVLMPCYICLDSLLNTNQSM*YSPSAT Trigger: AGTGGCACTTGGGGAATACCACATACTTTGATTTGT...GTTCAGTAGGGAATCTAAACAAATGTAGCAAGGCATGAGGACTGCAGAGATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| 3UTR-3UTR GCA 90 bp | CTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTCAACTATATATCTGTCCTGTGCCCCATaGTGTTTATTAATTACTGCA | + |
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Preference number: 2 (lower is better) Translates to: LHFCTICDQDDSPNSTIYLSCAP*CLLITA Trigger: TGCAGTAATTAATAAACAGCATGGGGCACAGGACAG...ATATATAGTTGAATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| 3UTR-3UTR GCA 90 bp | GAAATCTCTGCAGTCCTCATGCCTTGCTACATTTGTTTAGATTCCCTACTGAACTTAGAATCTGTCCTGTaGCCCATGCTGTTTATTAAT | + |
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Preference number: 2 (lower is better) Translates to: EISAVLMPCYICLDSLLNLESVL*PMLFIN Trigger: ATTAATAAACAGCATGGGGCACAGGACAGATTCTAA...GTTCAGTAGGGAATCTAAACAAATGTAGCAAGGCATGAGGACTGCAGAGATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| 3UTR-3UTR TCA 90 bp | AGGATAGTCAATGCTACACAGAGAAACCCTGTCTTAAAGTATACAAGACCCAAATACTTCTCACAGACTTaGACTCCATCTACAACTAAC | + |
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Preference number: 2 (lower is better) Translates to: RIVNATQRNPVLKYTRPKYFSQT*TPSTTN Trigger: GTTAGTTGTAGATGGAGTTCAAGTCTGTGAGAAGTA...TTTGGGTCTTGTATACTTTAAGACAGGGTTTCTCTGTGTAGCATTGACTATCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| 3UTR GCA 72 bp | CACTCAGCAGGAAGAGGCAGATCTGAGCTGGAGGTCTaGCTGGTTTACAGGATAGTCAATGCTACACAGAGA | + |
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Preference number: 3 (lower is better) Translates to: HSAGRGRSELEV*LVYRIVNATQR Trigger: TCTCTGTGTAGCATTGACTATCCTGTAAACCAGGCAGACCTCCAGCTCAGATCTGCCTCTTCCTGCTGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| 3UTR TCA 72 bp | AAGCTGGGTGGAGGTCTGTTGATAGAAGAGTCACAGTaGGACAGCAGTGAAGAATTAAGGAGGCTTGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: KLGGGLLIEESQ*DSSEELRRLGE Trigger: CTCCCCAAGCCTCCTTAATTCTTCACTGCTGTCTCACTGTGACTCTTCTATCAACAGACCTCCACCCAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| 3UTR CCA 72 bp | CCAAATATGGATACAGGGCATAACAGGCAAGCTGGGTaGAGGTCTGTTGATAGAAGAGTCACAGTGAGACAG | + |
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Preference number: 3 (lower is better) Translates to: PNMDTGHNRQAG*RSVDRRVTVRQ Trigger: CTGTCTCACTGTGACTCTTCTATCAACAGACCTCCACCCAGCTTGCCTGTTATGCCCTGTATCCATATTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| 3UTR GCA 72 bp | GACTTCTGTAACAGACCACGCCCAGAACCACCAGATTaGAAATGGACATCAAAGCAAAAGCTGCTCTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: DFCNRPRPEPPD*KWTSKQKLLSS Trigger: TGAAGAGAGCAGCTTTTGCTTTGATGTCCATTTGCAATCTGGTGGTTCTGGGCGTGGTCTGTTACAGAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169863.9 |
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| 3UTR TCA 72 bp | ATATACACCAGAAGGGAGCTTCCTTCTCCACATTCATaGCTCCGAAACAGAAAGTACCAGTTCACAGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: IYTRRELPSPHS*LRNRKYQFTGD Trigger: GTCTCCTGTGAACTGGTACTTTCTGTTTCGGAGTCATGAATGTGGAGAAGGAAGCTCCCTTCTGGTGTATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| 3UTR CCA 72 bp | ACAAAGATATTAAAGGAAAAGGCGGGCCTAGTTCCTTaGAAAGGACTGACCAGGAAAGGCAGAGTGACTTCA | + |
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Preference number: 3 (lower is better) Translates to: TKILKEKAGLVP*KGLTRKGRVTS Trigger: TGAAGTCACTCTGCCTTTCCTGGTCAGTCCTTTCCAAGGAACTAGGCCCGCCTTTTCCTTTAATATCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169863.9 |
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| 3UTR TCA 72 bp | AAAATAGGGAGCTCGCTCACTACTGCTACAACAATGTaGACAATTGGGTTAGATAATTCTCCACCATGTACC | + |
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Preference number: 3 (lower is better) Translates to: KIGSSLTTATTM*TIGLDNSPPCT Trigger: GGTACATGGTGGAGAATTATCTAACCCAATTGTTCACATTGTTGTAGCAGTAGTGAGCGAGCTCCCTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169863.9 |
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| 3UTR GCA 72 bp | AAACAGCTGCTTGAAATCTCTGCAGTCCTCATGCCTTaGTACATTTGTTTAGATTCCCTACTGAACATAAAT | + |
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Preference number: 3 (lower is better) Translates to: KQLLEISAVLMP*YICLDSLLNIN Trigger: ATTTATGTTCAGTAGGGAATCTAAACAAATGTAGCAAGGCATGAGGACTGCAGAGATTTCAAGCAGCTGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| 3UTR TCA 72 bp | ACTGAAATGACTGAGCATAAACTCACAAGTACTTCATaGCTCAATTTCTCAACATTTCTCTCACAAGGTTCA | + |
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Preference number: 3 (lower is better) Translates to: TEMTEHKLTSTS*LNFSTFLSQGS Trigger: TGAACCTTGTGAGAGAAATGTTGAGAAATTGAGTCATGAAGTACTTGTGAGTTTATGCTCAGTCATTTCAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| CDS-3UTR TCA 90 bp | GACCCAAAGGGACCGCAGAGTCAGAATCTAGGCATTTGTACATCTCACTGGGCATTCTGCAGGCGTGGCTaGGTTTCCAGAGCAGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: DPKGPQSQNLGICTSHWAFCRRG*VSRAGC Trigger: ACAGCCTGCTCTGGAAACTCAGCCACGCCTGCAGAA...TGCCCAGTGAGATGTACAAATGCCTAGATTCTGACTCTGCGGTCCCTTTGGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| CDS-3UTR TCA 90 bp | TGGATACAGGGCATAACAGGCAAGCTGGGTGGAGGTCTGTTGATAGAAGAGTCATTCTGCAGGCGTGGCTaGGTTTCCAGAGCAGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: WIQGITGKLGGGLLIEESFCRRG*VSRAGC Trigger: ACAGCCTGCTCTGGAAACTCAGCCACGCCTGCAGAA...TGACTCTTCTATCAACAGACCTCCACCCAGCTTGCCTGTTATGCCCTGTATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| CDS-3UTR CCA 90 bp | TTGGGGAGGGGCCTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATGCTCCCTCCTCACCCTaGTCTTCCACTGAGGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: LGRGLHFCTICDQDDSPNAPSSP*SSTEEV Trigger: TACTTCCTCAGTGGAAGACCAGGGTGAGGAGGGAGC...ATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAGGCCCCTCCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| CDS-3UTR TCA 90 bp | TGGATACAGGGCATAACAGGCAAGCTGGGTGGAGGTCTGTTGATAGAAGAGTCATGCAGCTCACTAGACTaGGTGTCGTCCAGTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: WIQGITGKLGGGLLIEESCSSLD*VSSSPG Trigger: ACCTGGACTGGACGACACTCAGTCTAGTGAGCTGCA...TGACTCTTCTATCAACAGACCTCCACCCAGCTTGCCTGTTATGCCCTGTATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| CDS-3UTR TCA 90 bp | TTGGGGAGGGGCCTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTTCAGACTGTTCCTCTaGCTGGCTCTTCTGTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LGRGLHFCTICDQDDSPNFRLFL*LALLSC Trigger: GCAGGACAGAAGAGCCAGTCAGAGGAACAGTCTGAA...ATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAGGCCCCTCCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| CDS-3UTR GCA 90 bp | TGGATACAGGGCATAACAGGCAAGCTGGGTGGAGGTCTGTTGATAGAAGAGTCACTCTCTCTCCAAGAGTaGTCACCTGCTTCAGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: WIQGITGKLGGGLLIEESLSLQE*SPASAP Trigger: AGGGGCTGAAGCAGGTGAGCACTCTTGGAGAGAGAG...TGACTCTTCTATCAACAGACCTCCACCCAGCTTGCCTGTTATGCCCTGTATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| CDS-3UTR GCA 90 bp | GACCCAAAGGGACCGCAGAGTCAGAATCTAGGCATTTGTACATCTCACTGGGCAGCTTGGCTTTCTTCTTaGCAGGGCCCTTATGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: DPKGPQSQNLGICTSHWAAWLSS*QGPYAL Trigger: AAGGGCATAAGGGCCCTGGCAAGAAGAAAGCCAAGC...TGCCCAGTGAGATGTACAAATGCCTAGATTCTGACTCTGCGGTCCCTTTGGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| CDS-3UTR TCA 90 bp | AGGGGCCTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTCAACTTGCAGCTCACTAGACTaGGTGTCGTCCAGTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: RGLHFCTICDQDDSPNSTCSSLD*VSSSPG Trigger: ACCTGGACTGGACGACACTCAGTCTAGTGAGCTGCA...AGTTGAATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAGGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| CDS-3UTR GCA 90 bp | GACCCAAAGGGACCGCAGAGTCAGAATCTAGGCATTTGTACATCTCACTGGGCAGTAAACTGTTCCAGGTaGTCAGAGGACGCTTCAGAC | + |
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Preference number: 4 (lower is better) Translates to: DPKGPQSQNLGICTSHWAVNCSR*SEDASD Trigger: GTCTGAAGCGTCCTCTGAGCACCTGGAACAGTTTAC...TGCCCAGTGAGATGTACAAATGCCTAGATTCTGACTCTGCGGTCCCTTTGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| CDS-3UTR CCA 90 bp | AAAGTCATGGGAGGAAGTATTAAAACAAGCATGACTTCTGTAACAGACCACGCCGTAGCCGATGGTTCCTaGGCCTCAGGTGCTCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: KVMGGSIKTSMTSVTDHAVADGS*ASGAPS Trigger: GGAGGGAGCACCTGAGGCCCAGGAACCATCGGCTAC...GGCGTGGTCTGTTACAGAAGTCATGCTTGTTTTAATACTTCCTCCCATGACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169863.9 |
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| CDS-3UTR CCA 90 bp | TTGGGGAGGGGCCTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATCTGTCCTGCATTCTGTaGAAATGGCGCGTCTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: LGRGLHFCTICDQDDSPNLSCIL*KWRVFK Trigger: CTTGAAGACGCGCCATTTCCACAGAATGCAGGACAG...ATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAGGCCCCTCCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| CDS-3UTR CCA 90 bp | TTGGGGAGGGGCCTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATGGCCCTTATGCCCTTTaGCCTTTCTTCTCAGATTGC | + |
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Preference number: 4 (lower is better) Translates to: LGRGLHFCTICDQDDSPNGPYAL*PFFSDC Trigger: GCAATCTGAGAAGAAAGGCCAAAGGGCATAAGGGCC...ATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAGGCCCCTCCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| CDS-3UTR TCA 90 bp | GACCCAAAGGGACCGCAGAGTCAGAATCTAGGCATTTGTACATCTCACTGGGCATCCTGTAGGCTTAACTaGATAAAACCCAACGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: DPKGPQSQNLGICTSHWASCRLN*IKPNGL Trigger: GAGGCCGTTGGGTTTTATTCAGTTAAGCCTACAGGA...TGCCCAGTGAGATGTACAAATGCCTAGATTCTGACTCTGCGGTCCCTTTGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| CDS-3UTR TCA 90 bp | TTGGGGAGGGGCCTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATCACAGCTTTCTCTGCTaGCTGTGTAAACTGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LGRGLHFCTICDQDDSPNHSFLC*LCKLFQ Trigger: CTGGAACAGTTTACACAGTCAGCAGAGAAAGCTGTG...ATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAGGCCCCTCCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| CDS-3UTR GCA 90 bp | GACCCAAAGGGACCGCAGAGTCAGAATCTAGGCATTTGTACATCTCACTGGGCATTAATAGCCTCTCTCTaGAATGCTCGGGTGACTGGT | + |
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Preference number: 4 (lower is better) Translates to: DPKGPQSQNLGICTSHWALIASL*NARVTG Trigger: ACCAGTCACCCGAGCATTGCAGAGAGAGGCTATTAA...TGCCCAGTGAGATGTACAAATGCCTAGATTCTGACTCTGCGGTCCCTTTGGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| CDS-3UTR GCA 90 bp | GTAGTGCTGCATGTCTTTAATCTCAACACTCAGCAGGAAGAGGCAGATCTGAGCGCTTGGCTTTCTTCTTaGCAGGGCCCTTATGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: VVLHVFNLNTQQEEADLSAWLSS*QGPYAL Trigger: AAGGGCATAAGGGCCCTGGCAAGAAGAAAGCCAAGC...GCTCAGATCTGCCTCTTCCTGCTGAGTGTTGAGATTAAAGACATGCAGCACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| CDS-3UTR CCA 90 bp | TTGGGGAGGGGCCTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATACTAGAAAAGCACTCTaGATGTTCAGGGTCCCCACA | + |
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Preference number: 4 (lower is better) Translates to: LGRGLHFCTICDQDDSPNTRKAL*MFRVPT Trigger: TGTGGGGACCCTGAACATCCAGAGTGCTTTTCTAGT...ATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAGGCCCCTCCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| CDS-3UTR TCA 90 bp | GTAGTGCTGCATGTCTTTAATCTCAACACTCAGCAGGAAGAGGCAGATCTGAGCTGGAAGCTGTGTACATaGGAGAAGACAGTGGGTACC | + |
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Preference number: 4 (lower is better) Translates to: VVLHVFNLNTQQEEADLSWKLCT*EKTVGT Trigger: GGTACCCACTGTCTTCTCTCATGTACACAGCTTCCA...GCTCAGATCTGCCTCTTCCTGCTGAGTGTTGAGATTAAAGACATGCAGCACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| CDS-3UTR CCA 90 bp | GACCCAAAGGGACCGCAGAGTCAGAATCTAGGCATTTGTACATCTCACTGGGCAAACAGGAGTCTTTTCTaGACCTTCAGAAGTGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: DPKGPQSQNLGICTSHWANRSLF*TFRSAS Trigger: GCTAGCACTTCTGAAGGTCCAGAAAAGACTCCTGTT...TGCCCAGTGAGATGTACAAATGCCTAGATTCTGACTCTGCGGTCCCTTTGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CCA 90 bp | AGGATAGTCAATGCTACACAGAGAAACCCTGTCTTAAAGTATACAAGACCCAAAGTAGCCGATGGTTCCTaGGCCTCAGGTGCTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RIVNATQRNPVLKYTRPKVADGS*ASGAPS Trigger: GGAGGGAGCACCTGAGGCCCAGGAACCATCGGCTAC...TTTGGGTCTTGTATACTTTAAGACAGGGTTTCTCTGTGTAGCATTGACTATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CCA 90 bp | AGGGGCCTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTCAACTCTGTCCTGCATTCTGTaGAAATGGCGCGTCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RGLHFCTICDQDDSPNSTLSCIL*KWRVFK Trigger: CTTGAAGACGCGCCATTTCCACAGAATGCAGGACAG...AGTTGAATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAGGCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR GCA 90 bp | AGGGGCCTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTCAACTTTCCAGAGCAGGCTGTaGATCTTTATCACCGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGLHFCTICDQDDSPNSTFQSRL*IFITAF Trigger: GAAAGCGGTGATAAAGATGCACAGCCTGCTCTGGAA...AGTTGAATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAGGCCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR GCA 90 bp | AGGGGCCTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTCAACTCAATCTCCTCTGAGCTaGTATCCACAGCTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGLHFCTICDQDDSPNSTQSPLS*YPQLSL Trigger: CAGAGAAAGCTGTGGATAGCAGCTCAGAGGAGATTG...AGTTGAATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAGGCCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CCA 90 bp | TGGATACAGGGCATAACAGGCAAGCTGGGTGGAGGTCTGTTGATAGAAGAGTCATGCATTCTGTGGAAATaGCGCGTCTTCAAGTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: WIQGITGKLGGGLLIEESCILWK*RVFKFY Trigger: GTAGAACTTGAAGACGCGCCATTTCCACAGAATGCA...TGACTCTTCTATCAACAGACCTCCACCCAGCTTGCCTGTTATGCCCTGTATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR TCA 90 bp | AGTCAATGCTACACAGAGAAACCCTGTCTTAAAGTATACAAGACCCAAAGGGACTTCAGACTGTTCCTCTaGCTGGCTCTTCTGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQCYTEKPCLKVYKTQRDFRLFL*LALLSC Trigger: GCAGGACAGAAGAGCCAGTCAGAGGAACAGTCTGAA...GTCCCTTTGGGTCTTGTATACTTTAAGACAGGGTTTCTCTGTGTAGCATTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR GCA 90 bp | AGGGGCCTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTCAACTTTTTCTGTGTCTGATTaGCGCCATAGAGAGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: RGLHFCTICDQDDSPNSTFSVSD*RHREGQ Trigger: TTGTCCCTCTCTATGGCGGCAATCAGACACAGAAAA...AGTTGAATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAGGCCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR GCA 90 bp | AGTCAATGCTACACAGAGAAACCCTGTCTTAAAGTATACAAGACCCAAAGGGACTTGCCAGGGCCCTTATaGCCTTTGGCCTTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQCYTEKPCLKVYKTQRDLPGPL*PLAFLL Trigger: GAGAAGAAAGGCCAAAGGGCATAAGGGCCCTGGCAA...GTCCCTTTGGGTCTTGTATACTTTAAGACAGGGTTTCTCTGTGTAGCATTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CCA 90 bp | TGGATACAGGGCATAACAGGCAAGCTGGGTGGAGGTCTGTTGATAGAAGAGTCATCACAATATCATCAATaGCCCACCACTGACCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: WIQGITGKLGGGLLIEESSQYHQ*PTTDQQ Trigger: TTGTTGGTCAGTGGTGGGCCATTGATGATATTGTGA...TGACTCTTCTATCAACAGACCTCCACCCAGCTTGCCTGTTATGCCCTGTATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CCA 90 bp | GACCCAAAGGGACCGCAGAGTCAGAATCTAGGCATTTGTACATCTCACTGGGCACAGACACAGGTCTTGTaGCTTCATATTGAGAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: DPKGPQSQNLGICTSHWAQTQVL*LHIEKH Trigger: ATGTTTCTCAATATGAAGCCACAAGACCTGTGTCTG...TGCCCAGTGAGATGTACAAATGCCTAGATTCTGACTCTGCGGTCCCTTTGGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CCA 90 bp | GTAGTGCTGCATGTCTTTAATCTCAACACTCAGCAGGAAGAGGCAGATCTGAGCAACAGGAGTCTTTTCTaGACCTTCAGAAGTGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VVLHVFNLNTQQEEADLSNRSLF*TFRSAS Trigger: GCTAGCACTTCTGAAGGTCCAGAAAAGACTCCTGTT...GCTCAGATCTGCCTCTTCCTGCTGAGTGTTGAGATTAAAGACATGCAGCACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CCA 90 bp | GACCCAAAGGGACCGCAGAGTCAGAATCTAGGCATTTGTACATCTCACTGGGCACTATATTTGATACAGTaGCAACATTGTCTGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DPKGPQSQNLGICTSHWALYLIQ*QHCLSS Trigger: GGAGCTCAGACAATGTTGCCACTGTATCAAATATAG...TGCCCAGTGAGATGTACAAATGCCTAGATTCTGACTCTGCGGTCCCTTTGGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CCA 90 bp | TTGGGGAGGGGCCTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATCTGGTACCACAGAATTaGGAAAATTACCATCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LGRGLHFCTICDQDDSPNLVPQN*ENYHQT Trigger: AGTCTGATGGTAATTTTCCCAATTCTGTGGTACCAG...ATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAGGCCCCTCCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR TCA 90 bp | GTAGTGCTGCATGTCTTTAATCTCAACACTCAGCAGGAAGAGGCAGATCTGAGCTCATCAGATGGGCTTTaGTCGATCAACATTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VVLHVFNLNTQQEEADLSSSDGL*SINISE Trigger: CTCAGAAATGTTGATCGATCAAAGCCCATCTGATGA...GCTCAGATCTGCCTCTTCCTGCTGAGTGTTGAGATTAAAGACATGCAGCACTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CCA 90 bp | AGGGGCCTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTCAACTTCACAATATCATCAATaGCCCACCACTGACCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: RGLHFCTICDQDDSPNSTSQYHQ*PTTDQQ Trigger: TTGTTGGTCAGTGGTGGGCCATTGATGATATTGTGA...AGTTGAATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAGGCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CCA 90 bp | TGGATACAGGGCATAACAGGCAAGCTGGGTGGAGGTCTGTTGATAGAAGAGTCATTCTTCGGGAAATTCTaGTACCACAGAATTGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WIQGITGKLGGGLLIEESFFGKF*YHRIGK Trigger: TTTCCCAATTCTGTGGTACCAGAATTTCCCGAAGAA...TGACTCTTCTATCAACAGACCTCCACCCAGCTTGCCTGTTATGCCCTGTATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CCA 90 bp | AGTCAATGCTACACAGAGAAACCCTGTCTTAAAGTATACAAGACCCAAAGGGACGGCCCTTATGCCCTTTaGCCTTTCTTCTCAGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQCYTEKPCLKVYKTQRDGPYAL*PFFSDC Trigger: GCAATCTGAGAAGAAAGGCCAAAGGGCATAAGGGCC...GTCCCTTTGGGTCTTGTATACTTTAAGACAGGGTTTCTCTGTGTAGCATTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| 3UTR CAA 72 bp | TACAAAGATATTAAAGGAAAAGGCGGGCCTAGTTCCTaGGAAAGGACTGACCAGGAAAGGCAGAGTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: YKDIKGKGGPSS*ERTDQERQSDF Trigger: GAAGTCACTCTGCCTTTCCTGGTCAGTCCTTTCCAAGGAACTAGGCCCGCCTTTTCCTTTAATATCTTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169863.9 |
||
| CDS-3UTR TCA 90 bp | AGTCAATGCTACACAGAGAAACCCTGTCTTAAAGTATACAAGACCCAAAGGGACTCCTGTAGGCTTAACTaGATAAAACCCAACGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQCYTEKPCLKVYKTQRDSCRLN*IKPNGL Trigger: GAGGCCGTTGGGTTTTATTCAGTTAAGCCTACAGGA...GTCCCTTTGGGTCTTGTATACTTTAAGACAGGGTTTCTCTGTGTAGCATTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR TCA 90 bp | TGGATACAGGGCATAACAGGCAAGCTGGGTGGAGGTCTGTTGATAGAAGAGTCACTTGTGGCTTCATATTaGGAAACATCTGTAGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: WIQGITGKLGGGLLIEESLVASY*ETSVAL Trigger: TAAAGCTACAGATGTTTCTCAATATGAAGCCACAAG...TGACTCTTCTATCAACAGACCTCCACCCAGCTTGCCTGTTATGCCCTGTATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR GCA 90 bp | GAAATCTCTGCAGTCCTCATGCCTTGCTACATTTGTTTAGATTCCCTACTGAACTTAATAGCCTCTCTCTaGAATGCTCGGGTGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EISAVLMPCYICLDSLLNLIASL*NARVTG Trigger: ACCAGTCACCCGAGCATTGCAGAGAGAGGCTATTAA...GTTCAGTAGGGAATCTAAACAAATGTAGCAAGGCATGAGGACTGCAGAGATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR GCA 90 bp | AAAGTCATGGGAGGAAGTATTAAAACAAGCATGACTTCTGTAACAGACCACGCCTTCCAGAGCAGGCTGTaGATCTTTATCACCGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KVMGGSIKTSMTSVTDHAFQSRL*IFITAF Trigger: GAAAGCGGTGATAAAGATGCACAGCCTGCTCTGGAA...GGCGTGGTCTGTTACAGAAGTCATGCTTGTTTTAATACTTCCTCCCATGACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169863.9 |
||
| CDS-3UTR GCA 90 bp | GAAATCTCTGCAGTCCTCATGCCTTGCTACATTTGTTTAGATTCCCTACTGAACCAATCTCCTCTGAGCTaGTATCCACAGCTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EISAVLMPCYICLDSLLNQSPLS*YPQLSL Trigger: CAGAGAAAGCTGTGGATAGCAGCTCAGAGGAGATTG...GTTCAGTAGGGAATCTAAACAAATGTAGCAAGGCATGAGGACTGCAGAGATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR GCA 90 bp | CTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTCAACTATATATTTGCCAGGGCCCTTATaGCCTTTGGCCTTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHFCTICDQDDSPNSTIYLPGPL*PLAFLL Trigger: GAGAAGAAAGGCCAAAGGGCATAAGGGCCCTGGCAA...ATATATAGTTGAATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| CDS-3UTR CCA 90 bp | GTAGTGCTGCATGTCTTTAATCTCAACACTCAGCAGGAAGAGGCAGATCTGAGCTTCTTCGGGAAATTCTaGTACCACAGAATTGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VVLHVFNLNTQQEEADLSFFGKF*YHRIGK Trigger: TTTCCCAATTCTGTGGTACCAGAATTTCCCGAAGAA...GCTCAGATCTGCCTCTTCCTGCTGAGTGTTGAGATTAAAGACATGCAGCACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR GCA 90 bp | GAAATCTCTGCAGTCCTCATGCCTTGCTACATTTGTTTAGATTCCCTACTGAACTTTTCTGTGTCTGATTaGCGCCATAGAGAGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: EISAVLMPCYICLDSLLNFSVSD*RHREGQ Trigger: TTGTCCCTCTCTATGGCGGCAATCAGACACAGAAAA...GTTCAGTAGGGAATCTAAACAAATGTAGCAAGGCATGAGGACTGCAGAGATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR GCA 90 bp | AGGATAGTCAATGCTACACAGAGAAACCCTGTCTTAAAGTATACAAGACCCAAAGTAAACTGTTCCAGGTaGTCAGAGGACGCTTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RIVNATQRNPVLKYTRPKVNCSR*SEDASD Trigger: GTCTGAAGCGTCCTCTGAGCACCTGGAACAGTTTAC...TTTGGGTCTTGTATACTTTAAGACAGGGTTTCTCTGTGTAGCATTGACTATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CCA 90 bp | AGGGGCCTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTCAACTCATTGTATCAAGAACTaGCAGTTGGTAATTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGLHFCTICDQDDSPNSTHCIKN*QLVILS Trigger: ACTCAGAATTACCAACTGCCAGTTCTTGATACAATG...AGTTGAATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAGGCCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CCA 90 bp | GAAATCTCTGCAGTCCTCATGCCTTGCTACATTTGTTTAGATTCCCTACTGAACTGCATTCTGTGGAAATaGCGCGTCTTCAAGTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: EISAVLMPCYICLDSLLNCILWK*RVFKFY Trigger: GTAGAACTTGAAGACGCGCCATTTCCACAGAATGCA...GTTCAGTAGGGAATCTAAACAAATGTAGCAAGGCATGAGGACTGCAGAGATTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR TCA 90 bp | AGTCAATGCTACACAGAGAAACCCTGTCTTAAAGTATACAAGACCCAAAGGGACTCATCAGATGGGCTTTaGTCGATCAACATTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQCYTEKPCLKVYKTQRDSSDGL*SINISE Trigger: CTCAGAAATGTTGATCGATCAAAGCCCATCTGATGA...GTCCCTTTGGGTCTTGTATACTTTAAGACAGGGTTTCTCTGTGTAGCATTGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR TCA 90 bp | CTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTCAACTATATATCACAGCTTTCTCTGCTaGCTGTGTAAACTGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHFCTICDQDDSPNSTIYHSFLC*LCKLFQ Trigger: CTGGAACAGTTTACACAGTCAGCAGAGAAAGCTGTG...ATATATAGTTGAATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CCA 90 bp | CTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTCAACTATATATACTAGAAAAGCACTCTaGATGTTCAGGGTCCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LHFCTICDQDDSPNSTIYTRKAL*MFRVPT Trigger: TGTGGGGACCCTGAACATCCAGAGTGCTTTTCTAGT...ATATATAGTTGAATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR GCA 90 bp | AGTCAATGCTACACAGAGAAACCCTGTCTTAAAGTATACAAGACCCAAAGGGACTTTTCCAATTCCTCATaGGTGCAGTTATCCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQCYTEKPCLKVYKTQRDFSNSS*VQLSSK Trigger: TTTGCTGGATAACTGCACGCATGAGGAATTGGAAAA...GTCCCTTTGGGTCTTGTATACTTTAAGACAGGGTTTCTCTGTGTAGCATTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR TCA 90 bp | AAAGTCATGGGAGGAAGTATTAAAACAAGCATGACTTCTGTAACAGACCACGCCCTTGTGGCTTCATATTaGGAAACATCTGTAGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KVMGGSIKTSMTSVTDHALVASY*ETSVAL Trigger: TAAAGCTACAGATGTTTCTCAATATGAAGCCACAAG...GGCGTGGTCTGTTACAGAAGTCATGCTTGTTTTAATACTTCCTCCCATGACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169863.9 |
||
| 3UTR CAA 72 bp | CTTTATTCCTTCCATCTAGGACTAAAGGTGTTTGGATaGAGTTCTAGACCTATCCAAATATGGATACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LYSFHLGLKVFG*SSRPIQIWIQG Trigger: GCCCTGTATCCATATTTGGATAGGTCTAGAACTCAATCCAAACACCTTTAGTCCTAGATGGAAGGAATAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR TCA 90 bp | CTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTCAACTATATATAAATCTTCCAGCATATaGAGCCCCAAATCTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHFCTICDQDDSPNSTIYKSSSI*SPKSFP Trigger: AGGAAAAGATTTGGGGCTTCATATGCTGGAAGATTT...ATATATAGTTGAATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR TCA 90 bp | AGGATAGTCAATGCTACACAGAGAAACCCTGTCTTAAAGTATACAAGACCCAAAAAATCTTCCAGCATATaGAGCCCCAAATCTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RIVNATQRNPVLKYTRPKKSSSI*SPKSFP Trigger: AGGAAAAGATTTGGGGCTTCATATGCTGGAAGATTT...TTTGGGTCTTGTATACTTTAAGACAGGGTTTCTCTGTGTAGCATTGACTATCCT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR GCA 90 bp | AGGATAGTCAATGCTACACAGAGAAACCCTGTCTTAAAGTATACAAGACCCAAATTTTCCAATTCCTCATaGGTGCAGTTATCCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RIVNATQRNPVLKYTRPKFSNSS*VQLSSK Trigger: TTTGCTGGATAACTGCACGCATGAGGAATTGGAAAA...TTTGGGTCTTGTATACTTTAAGACAGGGTTTCTCTGTGTAGCATTGACTATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR GCA 90 bp | AGTCAATGCTACACAGAGAAACCCTGTCTTAAAGTATACAAGACCCAAAGGGACTACTTTTCAAAGTATTaGTTGGAAGCTGTGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: SQCYTEKPCLKVYKTQRDYFSKY*LEAVYM Trigger: CATGTACACAGCTTCCAAGCAATACTTTGAAAAGTA...GTCCCTTTGGGTCTTGTATACTTTAAGACAGGGTTTCTCTGTGTAGCATTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CCA 90 bp | CTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTCAACTATATATCTATATTTGATACAGTaGCAACATTGTCTGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHFCTICDQDDSPNSTIYLYLIQ*QHCLSS Trigger: GGAGCTCAGACAATGTTGCCACTGTATCAAATATAG...ATATATAGTTGAATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CCA 90 bp | CTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTCAACTATATATCTGGTACCACAGAATTaGGAAAATTACCATCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LHFCTICDQDDSPNSTIYLVPQN*ENYHQT Trigger: AGTCTGATGGTAATTTTCCCAATTCTGTGGTACCAG...ATATATAGTTGAATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS CCA 90 bp | AACTGTTCCAGGTGCTCAGAGGACGCTTCAGACTGTTCCTCTGACTaGCTCTTCTGTCCTGCATTCTGTGGAAATGGCGCGTCTTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: NCSRCSEDASDCSSD*LFCPAFCGNGASSS Trigger: ACTTGAAGACGCGCCATTTCCACAGAATGCAGGACAGAAGAGCCAGTCAGAGGAACAGTCTGAAGCGTCCTCTGAGCACCTGGAACAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS GCA 90 bp | CCCATCTTGTTTCTGCAGGCGTGGCTGAGTTTCCAGAGCAGGCTGTaGATCTTTATCACCGCTTTCATCCTCAAAGTCAATCACTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PILFLQAWLSFQSRL*IFITAFILKVNHSL Trigger: CAGGGAGTGATTGACTTTGAGGATGAAAGCGGTGATAAAGATGCACAGCCTGCTCTGGAAACTCAGCCACGCCTGCAGAAACAAGATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS GCA 90 bp | CTGCTATCCACAGCTTTCTCTGCTGACTGTGTAAACTGTTCCAGGTaGTCAGAGGACGCTTCAGACTGTTCCTCTGACTGGCTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLSTAFSADCVNCSR*SEDASDCSSDWLFC Trigger: ACAGAAGAGCCAGTCAGAGGAACAGTCTGAAGCGTCCTCTGAGCACCTGGAACAGTTTACACAGTCAGCAGAGAAAGCTGTGGATAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS GCA 90 bp | TCTTCTTGCCAGGGCCCTTATGCCCTTTGGCCTTTCTTCTCAGATTaGGCCTGTCTACTACAGGAACTTCCACTTCAATCTCCTCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSCQGPYALWPFFSD*ACLLQELPLQSPLS Trigger: GCTCAGAGGAGATTGAAGTGGAAGTTCCTGTAGTAGACAGGCGCAATCTGAGAAGAAAGGCCAAAGGGCATAAGGGCCCTGGCAAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CAA 90 bp | TTGGGGAGGGGCCTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATAATGCTTCCCAATCTTaGGCCGCTTTAGATGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGRGLHFCTICDQDDSPNNASQS*AALDGC Trigger: GCAGCCATCTAAAGCGGCCAAAGATTGGGAAGCATT...ATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAGGCCCCTCCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS GCA 90 bp | CAGAATCCTGAAAATGCTTCCCAATCTTTGGCCGCTTTAGATGGCTaGTCCGAGTACGCGTGGAAACAGGAGTCTTTTCTGGACCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QNPENASQSLAALDG*SEYAWKQESFLDLQ Trigger: CTGAAGGTCCAGAAAAGACTCCTGTTTCCACGCGTACTCGGAGCAGCCATCTAAAGCGGCCAAAGATTGGGAAGCATTTTCAGGATTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CAA 90 bp | TGGATACAGGGCATAACAGGCAAGCTGGGTGGAGGTCTGTTGATAGAAGAGTCATCTAACGCAGAGTCCTaGTCCCCATCTTGTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WIQGITGKLGGGLLIEESSNAES*SPSCFC Trigger: GCAGAAACAAGATGGGGACAAGGACTCTGCGTTAGA...TGACTCTTCTATCAACAGACCTCCACCCAGCTTGCCTGTTATGCCCTGTATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CAA 90 bp | TGGATACAGGGCATAACAGGCAAGCTGGGTGGAGGTCTGTTGATAGAAGAGTCAGCCTTTCTTCTCAGATaGCGCCTGTCTACTACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WIQGITGKLGGGLLIEESAFLLR*RLSTTG Trigger: TCCTGTAGTAGACAGGCGCAATCTGAGAAGAAAGGC...TGACTCTTCTATCAACAGACCTCCACCCAGCTTGCCTGTTATGCCCTGTATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS TCA 90 bp | CTAGCAAAGGCATCTTTTAGGGAATGGATCTGCAGCTCACTAGACTaGGTGTCGTCCAGTCCAGGTTCATGTTCTGGTACAGCAGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LAKASFREWICSSLD*VSSSPGSCSGTAAR Trigger: TCTTGCTGCTGTACCAGAACATGAACCTGGACTGGACGACACTCAGTCTAGTGAGCTGCAGATCCATTCCCTAAAAGATGCCTTTGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS CCA 90 bp | AACATCTGTAGCTTTAATAGCCTCTCTCTGCAATGCTCGGGTGACTaGTACTCGCTGATGCCAATGACCCACACCTTCAACTTCCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NICSFNSLSLQCSGD*YSLMPMTHTFNFPK Trigger: CTTTGGGAAGTTGAAGGTGTGGGTCATTGGCATCAGCGAGTACCAGTCACCCGAGCATTGCAGAGAGAGGCTATTAAAGCTACAGATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CAA 90 bp | AGGGGCCTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTCAACTTCTAACGCAGAGTCCTaGTCCCCATCTTGTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RGLHFCTICDQDDSPNSTSNAES*SPSCFC Trigger: GCAGAAACAAGATGGGGACAAGGACTCTGCGTTAGA...AGTTGAATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAGGCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CAA 90 bp | AGGGGCCTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTCAACTGCCTTTCTTCTCAGATaGCGCCTGTCTACTACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RGLHFCTICDQDDSPNSTAFLLR*RLSTTG Trigger: TCCTGTAGTAGACAGGCGCAATCTGAGAAGAAAGGC...AGTTGAATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAGGCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CAA 90 bp | TGGATACAGGGCATAACAGGCAAGCTGGGTGGAGGTCTGTTGATAGAAGAGTCACTCCAGACACAGGTCTaGTGGCTTCATATTGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: WIQGITGKLGGGLLIEESLQTQV*WLHIEK Trigger: TTTCTCAATATGAAGCCACAAGACCTGTGTCTGGAG...TGACTCTTCTATCAACAGACCTCCACCCAGCTTGCCTGTTATGCCCTGTATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CAA 90 bp | TTGGGGAGGGGCCTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATGCAGCATACTCTATTTaGTTTACTGAAGCCGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LGRGLHFCTICDQDDSPNAAYSI*FTEAVG Trigger: ACCTACGGCTTCAGTAAACAAAATAGAGTATGCTGC...ATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAGGCCCCTCCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CAA 90 bp | GTAGTGCTGCATGTCTTTAATCTCAACACTCAGCAGGAAGAGGCAGATCTGAGCGATACAGTGGCAACATaGTCTGAGCTCCCCAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VVLHVFNLNTQQEEADLSDTVAT*SELPKS Trigger: ACTTTTGGGGAGCTCAGACAATGTTGCCACTGTATC...GCTCAGATCTGCCTCTTCCTGCTGAGTGTTGAGATTAAAGACATGCAGCACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS GCA 90 bp | TTCATATTGAGAAACATCTGTAGCTTTAATAGCCTCTCTCTGCAATaGTCGGGTGACTGGTACTCGCTGATGCCAATGACCCACACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FILRNICSFNSLSLQ*SGDWYSLMPMTHTF Trigger: GAAGGTGTGGGTCATTGGCATCAGCGAGTACCAGTCACCCGAGCATTGCAGAGAGAGGCTATTAAAGCTACAGATGTTTCTCAATATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS TCA 90 bp | GCAGCAAGACCATATTCTCCAGACACAGGTCTTGTGGCTTCATATTaGGAAACATCTGTAGCTTTAATAGCCTCTCTCTGCAATGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: AARPYSPDTGLVASY*ETSVALIASLCNAR Trigger: CCGAGCATTGCAGAGAGAGGCTATTAAAGCTACAGATGTTTCTCAATATGAAGCCACAAGACCTGTGTCTGGAGAATATGGTCTTGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CAA 90 bp | GACCCAAAGGGACCGCAGAGTCAGAATCTAGGCATTTGTACATCTCACTGGGCAGTTTTCATCTTCACCTaGAGAACTACTAAACTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: DPKGPQSQNLGICTSHWAVFIFT*RTTKLR Trigger: TCTGAGTTTAGTAGTTCTCAAGGTGAAGATGAAAAC...TGCCCAGTGAGATGTACAAATGCCTAGATTCTGACTCTGCGGTCCCTTTGGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS GCA 90 bp | TGTGCATCTTTATCACCGCTTTCATCCTCAAAGTCAATCACTCCCTaGTCAGGCTCTTCTTCAAGGAATTCTTCTGAGCTCTCTGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: CASLSPLSSSKSITP*SGSSSRNSSELSDV Trigger: AACATCAGAGAGCTCAGAAGAATTCCTTGAAGAAGAGCCTGAGCAGGGAGTGATTGACTTTGAGGATGAAAGCGGTGATAAAGATGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CAA 90 bp | CTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTCAACTATATATAATGCTTCCCAATCTTaGGCCGCTTTAGATGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LHFCTICDQDDSPNSTIYNASQS*AALDGC Trigger: GCAGCCATCTAAAGCGGCCAAAGATTGGGAAGCATT...ATATATAGTTGAATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CAA 90 bp | AGGATAGTCAATGCTACACAGAGAAACCCTGTCTTAAAGTATACAAGACCCAAAGATACAGTGGCAACATaGTCTGAGCTCCCCAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RIVNATQRNPVLKYTRPKDTVAT*SELPKS Trigger: ACTTTTGGGGAGCTCAGACAATGTTGCCACTGTATC...TTTGGGTCTTGTATACTTTAAGACAGGGTTTCTCTGTGTAGCATTGACTATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CAA 90 bp | CTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTCAACTATATATCTCCAGACACAGGTCTaGTGGCTTCATATTGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LHFCTICDQDDSPNSTIYLQTQV*WLHIEK Trigger: TTTCTCAATATGAAGCCACAAGACCTGTGTCTGGAG...ATATATAGTTGAATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS CCA 90 bp | CTTCCACAGAATCTTAGCATAGTCAGTACTGCTATGGCACAAGAATaGGATCTCATTTCTCTCCATTTCCTGCTTTCTATAAATAATCCG | + |
|
Preference number: 5 (lower is better) Translates to: LPQNLSIVSTAMAQE*DLISLHFLLSINNP Trigger: CGGATTATTTATAGAAAGCAGGAAATGGAGAGAAATGAGATCCCATTCTTGTGCCATAGCAGTACTGACTATGCTAAGATTCTGTGGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CAA 90 bp | AAAGTCATGGGAGGAAGTATTAAAACAAGCATGACTTCTGTAACAGACCACGCCATCAAGAACTGGCAGTaGGTAATTCTGAGTAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KVMGGSIKTSMTSVTDHAIKNWQ*VILSKK Trigger: TTTCTTACTCAGAATTACCAACTGCCAGTTCTTGAT...GGCGTGGTCTGTTACAGAAGTCATGCTTGTTTTAATACTTCCTCCCATGACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169863.9 |
||
| CDS-3UTR CAA 90 bp | AAAGTCATGGGAGGAAGTATTAAAACAAGCATGACTTCTGTAACAGACCACGCCTTTTCAAAGTATTGCTaGGAAGCTGTGTACATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KVMGGSIKTSMTSVTDHAFSKYC*EAVYMR Trigger: TCTCATGTACACAGCTTCCAAGCAATACTTTGAAAA...GGCGTGGTCTGTTACAGAAGTCATGCTTGTTTTAATACTTCCTCCCATGACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169863.9 |
||
| CDS-3UTR CAA 90 bp | GAAATCTCTGCAGTCCTCATGCCTTGCTACATTTGTTTAGATTCCCTACTGAACTCTTGTGGCTTCATATaGAGAAACATCTGTAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: EISAVLMPCYICLDSLLNSCGFI*RNICSF Trigger: AAAGCTACAGATGTTTCTCAATATGAAGCCACAAGA...GTTCAGTAGGGAATCTAAACAAATGTAGCAAGGCATGAGGACTGCAGAGATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CAA 90 bp | GAAATCTCTGCAGTCCTCATGCCTTGCTACATTTGTTTAGATTCCCTACTGAACGTTTTCATCTTCACCTaGAGAACTACTAAACTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: EISAVLMPCYICLDSLLNVFIFT*RTTKLR Trigger: TCTGAGTTTAGTAGTTCTCAAGGTGAAGATGAAAAC...GTTCAGTAGGGAATCTAAACAAATGTAGCAAGGCATGAGGACTGCAGAGATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CAA 90 bp | CTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTCAACTATATATATCAAGAACTGGCAGTaGGTAATTCTGAGTAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LHFCTICDQDDSPNSTIYIKNWQ*VILSKK Trigger: TTTCTTACTCAGAATTACCAACTGCCAGTTCTTGAT...ATATATAGTTGAATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS-3UTR CAA 90 bp | CTACACTTCTGCACTATCTGTGATCAGGACGACAGTCCAAATTCAACTATATATTTTTCAAAGTATTGCTaGGAAGCTGTGTACATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LHFCTICDQDDSPNSTIYFSKYC*EAVYMR Trigger: TCTCATGTACACAGCTTCCAAGCAATACTTTGAAAA...ATATATAGTTGAATTTGGACTGTCGTCCTGATCACAGATAGTGCAGAAGTGTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS TCA 72 bp | GGCGCGTCTTCAAGTTCTACCTCTATCAGAGAACTCTaGGTAGCCGATGGTTCCTGGGCCTCAGGTGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GASSSSTSIREL*VADGSWASGAP Trigger: GGGAGCACCTGAGGCCCAGGAACCATCGGCTACTCAGAGTTCTCTGATAGAGGTAGAACTTGAAGACGCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS TCA 72 bp | GAGTCCTTGTCCCCATCTTGTTTCTGCAGGCGTGGCTaGGTTTCCAGAGCAGGCTGTGCATCTTTATCACCG | + |
|
Preference number: 6 (lower is better) Translates to: ESLSPSCFCRRG*VSRAGCASLSP Trigger: CGGTGATAAAGATGCACAGCCTGCTCTGGAAACTCAGCCACGCCTGCAGAAACAAGATGGGGACAAGGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS GCA 72 bp | CAGGTCAGCTTGGCTTTCTTCTTGCCAGGGCCCTTATaGCCTTTGGCCTTTCTTCTCAGATTGCGCCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: QVSLAFFLPGPL*PLAFLLRLRLS Trigger: AGACAGGCGCAATCTGAGAAGAAAGGCCAAAGGGCATAAGGGCCCTGGCAAGAAGAAAGCCAAGCTGACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS CCA 72 bp | CGCAGAGTCCTTGTCCCCATCTTGTTTCTGCAGGCGTaGCTGAGTTTCCAGAGCAGGCTGTGCATCTTTATC | + |
|
Preference number: 6 (lower is better) Translates to: RRVLVPILFLQA*LSFQSRLCIFI Trigger: GATAAAGATGCACAGCCTGCTCTGGAAACTCAGCCACGCCTGCAGAAACAAGATGGGGACAAGGACTCTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS CCA 72 bp | GCTTGGCTTTCTTCTTGCCAGGGCCCTTATGCCCTTTaGCCTTTCTTCTCAGATTGCGCCTGTCTACTACAG | + |
|
Preference number: 6 (lower is better) Translates to: AWLSSCQGPYAL*PFFSDCACLLQ Trigger: CTGTAGTAGACAGGCGCAATCTGAGAAGAAAGGCCAAAGGGCATAAGGGCCCTGGCAAGAAGAAAGCCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS CCA 72 bp | AGCTTTAATAGCCTCTCTCTGCAATGCTCGGGTGACTaGTACTCGCTGATGCCAATGACCCACACCTTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SFNSLSLQCSGD*YSLMPMTHTFN Trigger: GTTGAAGGTGTGGGTCATTGGCATCAGCGAGTACCAGTCACCCGAGCATTGCAGAGAGAGGCTATTAAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS CAA 72 bp | CCAGGGCCCTTATGCCCTTTGGCCTTTCTTCTCAGATaGCGCCTGTCTACTACAGGAACTTCCACTTCAATC | + |
|
Preference number: 6 (lower is better) Translates to: PGPLCPLAFLLR*RLSTTGTSTSI Trigger: GATTGAAGTGGAAGTTCCTGTAGTAGACAGGCGCAATCTGAGAAGAAAGGCCAAAGGGCATAAGGGCCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS CAA 90 bp | TTCTTCTTGCCAGGGCCCTTATGCCCTTTGGCCTTTCTTCTCAGATaGCGCCTGTCTACTACAGGAACTTCCACTTCAATCTCCTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: FFLPGPLCPLAFLLR*RLSTTGTSTSISSE Trigger: CTCAGAGGAGATTGAAGTGGAAGTTCCTGTAGTAGACAGGCGCAATCTGAGAAGAAAGGCCAAAGGGCATAAGGGCCCTGGCAAGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS GCA 72 bp | GAAAATGCTTCCCAATCTTTGGCCGCTTTAGATGGCTaGTCCGAGTACGCGTGGAAACAGGAGTCTTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: ENASQSLAALDG*SEYAWKQESFL Trigger: CAGAAAAGACTCCTGTTTCCACGCGTACTCGGAGCAGCCATCTAAAGCGGCCAAAGATTGGGAAGCATTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS GCA 72 bp | CAGGGCCCTTATGCCCTTTGGCCTTTCTTCTCAGATTaGGCCTGTCTACTACAGGAACTTCCACTTCAATCT | + |
|
Preference number: 6 (lower is better) Translates to: QGPYALWPFFSD*ACLLQELPLQS Trigger: AGATTGAAGTGGAAGTTCCTGTAGTAGACAGGCGCAATCTGAGAAGAAAGGCCAAAGGGCATAAGGGCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS CCA 72 bp | AGCACTCTGGATGTTCAGGGTCCCCACACCTTAGGCTaGAGAGGTAATCCTCAGAAGAGTTTTCCAATTCCT | + |
|
Preference number: 6 (lower is better) Translates to: STLDVQGPHTLG*RGNPQKSFPIP Trigger: AGGAATTGGAAAACTCTTCTGAGGATTACCTCTCCAGCCTAAGGTGTGGGGACCCTGAACATCCAGAGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS GCA 72 bp | CAGGCGCAAAGAGAGCAAGAATTTTCTGTGTCTGATTaGCGCCATAGAGAGGGACAAAGCCCACATTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: QAQREQEFSVSD*RHREGQSPHLT Trigger: TGTCAAATGTGGGCTTTGTCCCTCTCTATGGCGGCAATCAGACACAGAAAATTCTTGCTCTCTTTGCGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS GCA 72 bp | AGAAACATCTGTAGCTTTAATAGCCTCTCTCTGCAATaGTCGGGTGACTGGTACTCGCTGATGCCAATGACC | + |
|
Preference number: 6 (lower is better) Translates to: RNICSFNSLSLQ*SGDWYSLMPMT Trigger: GGTCATTGGCATCAGCGAGTACCAGTCACCCGAGCATTGCAGAGAGAGGCTATTAAAGCTACAGATGTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS GCA 72 bp | TTTCTGCAGGCGTGGCTGAGTTTCCAGAGCAGGCTGTaGATCTTTATCACCGCTTTCATCCTCAAAGTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: FLQAWLSFQSRL*IFITAFILKVN Trigger: ATTGACTTTGAGGATGAAAGCGGTGATAAAGATGCACAGCCTGCTCTGGAAACTCAGCCACGCCTGCAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS CAA 72 bp | AAGCCCACATTTGACAGACTAACGGGAATCGTAATGTaGAGACTAGAAAAGCACTCTGGATGTTCAGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: KPTFDRLTGIVM*RLEKHSGCSGS Trigger: GGACCCTGAACATCCAGAGTGCTTTTCTAGTCTCAACATTACGATTCCCGTTAGTCTGTCAAATGTGGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS CAA 72 bp | TCTGAGCTCTCTGATGTTCGTGCAGCATACTCTATTTaGTTTACTGAAGCCGTAGGTGAAGTCTTGGCAACG | + |
|
Preference number: 6 (lower is better) Translates to: SELSDVRAAYSI*FTEAVGEVLAT Trigger: CGTTGCCAAGACTTCACCTACGGCTTCAGTAAACAAAATAGAGTATGCTGCACGAACATCAGAGAGCTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS TCA 72 bp | CCATATTCTCCAGACACAGGTCTTGTGGCTTCATATTaGGAAACATCTGTAGCTTTAATAGCCTCTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PYSPDTGLVASY*ETSVALIASLC Trigger: GCAGAGAGAGGCTATTAAAGCTACAGATGTTTCTCAATATGAAGCCACAAGACCTGTGTCTGGAGAATATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
||
| CDS CAA 90 bp | AGGAATTCTTCTGAGCTCTCTGATGTTCGTGCAGCATACTCTATTTaGTTTACTGAAGCCGTAGGTGAAGTCTTGGCAACGTTTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: RNSSELSDVRAAYSI*FTEAVGEVLATFSS Trigger: AGATGAAAACGTTGCCAAGACTTCACCTACGGCTTCAGTAAACAAAATAGAGTATGCTGCACGAACATCAGAGAGCTCAGAAGAATTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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| CDS CAA 72 bp | GAGACTGGTTCTTCGGGAAATTCTGGTACCACAGAATaGGGAAAATTACCATCAGACTTTTCTATATTTGAT | + |
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Preference number: 6 (lower is better) Translates to: ETGSSGNSGTTE*GKLPSDFSIFD Trigger: ATCAAATATAGAAAAGTCTGATGGTAATTTTCCCAATTCTGTGGTACCAGAATTTCCCGAAGAACCAGTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042517.8 ENSMUST00000169863.9 |
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