Pregenerated sensors for FAM168B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037503Ensembl transcript IDs: ENSMUST00000047534.12, ENSMUST00000167518.8, ENSMUST00000170092.8, ENSMUST00000185231.2, ENSMUST00000185469.7, ENSMUST00000191307.7
Found 260 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACCCCGTCATCCCTGCTGCTGCTGCTGCTGCTGTCTGGAGCTGCTaGAGGTGTGCTCTCTCTCCCCCAGTCCCTGCAGCTCCCTCAGGA | + |
|
Preference number: 1 (lower is better) Translates to: DPVIPAAAAAAVWSC*RCALSPPVPAAPSG Trigger: TCCTGAGGGAGCTGCAGGGACTGGGGGAGAGAGAGCACACCTGCAGCAGCTCCAGACAGCAGCAGCAGCAGCAGCAGGGATGACGGGGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 90 bp | AGGGACCCCGTCATCCCTGCTGCTGCTGCTGCTGCTGTCTGGAGCTaGTGCAGGTGTGCTCTCTCTCCCCCAGTCCCTGCAGCTCCCTCA | + |
|
Preference number: 1 (lower is better) Translates to: RDPVIPAAAAAAVWS*CRCALSPPVPAAPS Trigger: TGAGGGAGCTGCAGGGACTGGGGGAGAGAGAGCACACCTGCAGCAGCTCCAGACAGCAGCAGCAGCAGCAGCAGGGATGACGGGGTCCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 90 bp | AGTACGGGTGCAGGCTGTGTGCTCCAGCAAGCGTGTCTATCTCTGTaGAGGGTGTGCTTGCTGGTGCTACCCCTCTCCCCATGCACGCGC | + |
|
Preference number: 1 (lower is better) Translates to: STGAGCVLQQACLSL*RVCLLVLPLSPCTR Trigger: GCGCGTGCATGGGGAGAGGGGTAGCACCAGCAAGCACACCCTGCACAGAGATAGACACGCTTGCTGGAGCACACAGCCTGCACCCGTACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 90 bp | GCCCTCTGCAACCCTCAGAAAGCACCAGAGGAAAGGACCAGTAGCTaGCACACTTGCCACTGCACCCTGGGAGGTCCTGCACCACTTGGC | + |
|
Preference number: 1 (lower is better) Translates to: ALCNPQKAPEERTSS*HTCHCTLGGPAPLG Trigger: GCCAAGTGGTGCAGGACCTCCCAGGGTGCAGTGGCAAGTGTGGCAGCTACTGGTCCTTTCCTCTGGTGCTTTCTGAGGGTTGCAGAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 90 bp | CCAGCCCCCAGTCTGTCCCAACTGCTCTATACACTGCCCACGGTCTaGACCAGACGTACCCACTGCCCTCCCTGGGAACTGCCTGTATAC | + |
|
Preference number: 1 (lower is better) Translates to: PAPSLSQLLYTLPTV*TRRTHCPPWELPVY Trigger: GTATACAGGCAGTTCCCAGGGAGGGCAGTGGGTACGTCTGGTGCAGACCGTGGGCAGTGTATAGAGCAGTTGGGACAGACTGGGGGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR TCA 90 bp | GGCCCTTTCTGCTTTCCACATCTGCTTGGTACTGAGTGCCTTCAGTaGCAGCAGAGTGGCTTCCGCAGGTTTCCGCAGGCTTCCCGGGCC | + |
|
Preference number: 1 (lower is better) Translates to: GPFCFPHLLGTECLQ*QQSGFRRFPQASRA Trigger: GGCCCGGGAAGCCTGCGGAAACCTGCGGAAGCCACTCTGCTGTCACTGAAGGCACTCAGTACCAAGCAGATGTGGAAAGCAGAAAGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR CCA 90 bp | GTGTGCTCCAGCAAGCGTGTCTATCTCTGTGCAGGGTGTGCTTGCTaGTGCTACCCCTCTCCCCATGCACGCGCACATCCAAGCACACAC | + |
|
Preference number: 1 (lower is better) Translates to: VCSSKRVYLCAGCAC*CYPSPHARAHPSTH Trigger: GTGTGTGCTTGGATGTGCGCGTGCATGGGGAGAGGGGTAGCACCAGCAAGCACACCCTGCACAGAGATAGACACGCTTGCTGGAGCACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 90 bp | CCACACTTGCCACTGCACCCTGGGAGGTCCTGCACCACTTGGCAGTaGCAGATATACCACAAGTACAGATGCCAGCTGCTGAGAGAAGGT | + |
|
Preference number: 1 (lower is better) Translates to: PHLPLHPGRSCTTWQ*QIYHKYRCQLLREG Trigger: ACCTTCTCTCAGCAGCTGGCATCTGTACTTGTGGTATATCTGGCACTGCCAAGTGGTGCAGGACCTCCCAGGGTGCAGTGGCAAGTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR TCA 90 bp | GGCTCAGCGTACATCGCAGAGGTGCGTGAGGGACAGGACAGGCTGTaGACGTGGTCCAGTCCTTCGGGTTTTGCATATGATGGTTTTGCA | + |
|
Preference number: 1 (lower is better) Translates to: GSAYIAEVREGQDRL*TWSSPSGFAYDGFA Trigger: TGCAAAACCATCATATGCAAAACCCGAAGGACTGGACCACGTTCACAGCCTGTCCTGTCCCTCACGCACCTCTGCGATGTACGCTGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 90 bp | GCAAGAGCACTCCTGAACTGCCTGGCCCTTTCTGCTTTCCACATCTaGTTGGTACTGAGTGCCTTCAGTGACAGCAGAGTGGCTTCCGCA | + |
|
Preference number: 1 (lower is better) Translates to: ARALLNCLALSAFHI*LVLSAFSDSRVASA Trigger: TGCGGAAGCCACTCTGCTGTCACTGAAGGCACTCAGTACCAAGCAGATGTGGAAAGCAGAAAGGGCCAGGCAGTTCAGGAGTGCTCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 90 bp | AGGAGGGCAGCAGCCCCTCCCTCTCTCTTGAGAACTCAGGGCCTGTaGATACACACACACTGTGTGTTGCTGCAAGTAGGCTCAAAGACT | + |
|
Preference number: 1 (lower is better) Translates to: RRAAAPPSLLRTQGL*IHTHCVLLQVGSKT Trigger: AGTCTTTGAGCCTACTTGCAGCAACACACAGTGTGTGTGTATGCACAGGCCCTGAGTTCTCAAGAGAGAGGGAGGGGCTGCTGCCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 90 bp | ACGTTATCCTGTAAGACATACAGAGAAAACTCGGATGGCAGACCCTaGTCTGACACACAGACCACTCCTCACCCCAGCTGGACTCGTCAC | + |
|
Preference number: 1 (lower is better) Translates to: TLSCKTYRENSDGRP*SDTQTTPHPSWTRH Trigger: GTGACGAGTCCAGCTGGGGTGAGGAGTGGTCTGTGTGTCAGAGCAGGGTCTGCCATCCGAGTTTTCTCTGTATGTCTTACAGGATAACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 90 bp | AATCTTTCCCACCACAGAGCCTTCCAAGCAAGAGCACTCCTGAACTaGCTGGCCCTTTCTGCTTTCCACATCTGCTTGGTACTGAGTGCC | + |
|
Preference number: 1 (lower is better) Translates to: NLSHHRAFQARALLN*LALSAFHICLVLSA Trigger: GGCACTCAGTACCAAGCAGATGTGGAAAGCAGAAAGGGCCAGGCAGTTCAGGAGTGCTCTTGCTTGGAAGGCTCTGTGGTGGGAAAGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 90 bp | CCCAGTCTGCTTCTCCAGCCTCCTGTCCCATCAAACAACAAACCATaGCAGGTGCATGGCCGAGGAACAGTAGACACTCAACAACCAATG | + |
|
Preference number: 1 (lower is better) Translates to: PSLLLQPPVPSNNKP*QVHGRGTVDTQQPM Trigger: CATTGGTTGTTGAGTGTCTACTGTTCCTCGGCCATGCACCTGGCATGGTTTGTTGTTTGATGGGACAGGAGGCTGGAGAAGCAGACTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 90 bp | ACTCAACAGTTCCTCCAAGGAAGACCACAACACAGAGACAACAGTTaGAGAGGCCGCTTCCATGCCTGTAGCCTAACTGACCCAATCCTG | + |
|
Preference number: 1 (lower is better) Translates to: TQQFLQGRPQHRDNS*RGRFHACSLTDPIL Trigger: CAGGATTGGGTCAGTTAGGCTACAGGCATGGAAGCGGCCTCTGCAACTGTTGTCTCTGTGTTGTGGTCTTCCTTGGAGGAACTGTTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 90 bp | GAACTAAGGAAATCTGAGGCAGCCCCAATGTGTAAAGCTGGTGCTTaGCAACCTCTCCCAACCACAGACACACTCAGAGGGCCAATGAGA | + |
|
Preference number: 1 (lower is better) Translates to: ELRKSEAAPMCKAGA*QPLPTTDTLRGPMR Trigger: TCTCATTGGCCCTCTGAGTGTGTCTGTGGTTGGGAGAGGTTGGCAAGCACCAGCTTTACACATTGGGGCTGCCTCAGATTTCCTTAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR CCA 90 bp | TCTCCAGCCTCCTGTCCCATCAAACAACAAACCATGCCAGGTGCATaGCCGAGGAACAGTAGACACTCAACAACCAATGCAAAACACTCA | + |
|
Preference number: 1 (lower is better) Translates to: SPASCPIKQQTMPGA*PRNSRHSTTNAKHS Trigger: TGAGTGTTTTGCATTGGTTGTTGAGTGTCTACTGTTCCTCGGCCATGCACCTGGCATGGTTTGTTGTTTGATGGGACAGGAGGCTGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR CCA 90 bp | TGTTCTAAAGAAATCCCCTTCTGTCTGATGAGTCCAGAGAAAACTTaGAAATCCCAACCCTGCAAGTCACTCAGCACAGGGACGGGATCC | + |
|
Preference number: 1 (lower is better) Translates to: CSKEIPFCLMSPEKT*KSQPCKSLSTGTGS Trigger: GGATCCCGTCCCTGTGCTGAGTGACTTGCAGGGTTGGGATTTCCAAGTTTTCTCTGGACTCATCAGACAGAAGGGGATTTCTTTAGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR CCA 90 bp | GTGCCAGATATACCACAAGTACAGATGCCAGCTGCTGAGAGAAGGTaGCCCCACAGTAATACTAAACTCCAATATTCAGAAGGAGAACTA | + |
|
Preference number: 1 (lower is better) Translates to: VPDIPQVQMPAAERR*PHSNTKLQYSEGEL Trigger: TAGTTCTCCTTCTGAATATTGGAGTTTAGTATTACTGTGGGGCCACCTTCTCTCAGCAGCTGGCATCTGTACTTGTGGTATATCTGGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR CCA 90 bp | TGGTTCCCTAAGCAAAATAAAGCAAAAGACAACACTGCCTCAGTGTaGCTGCTTCTCTTTGACATCTTCCCTCCTAGGAAGACAGTTTAC | + |
|
Preference number: 1 (lower is better) Translates to: WFPKQNKAKDNTASV*LLLFDIFPPRKTVY Trigger: GTAAACTGTCTTCCTAGGAGGGAAGATGTCAAAGAGAAGCAGCCACACTGAGGCAGTGTTGTCTTTTGCTTTATTTTGCTTAGGGAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 90 bp | TCCCTAAGCAAAATAAAGCAAAAGACAACACTGCCTCAGTGTGGCTaGTTCTCTTTGACATCTTCCCTCCTAGGAAGACAGTTTACTTCT | + |
|
Preference number: 1 (lower is better) Translates to: SLSKIKQKTTLPQCG*FSLTSSLLGRQFTS Trigger: AGAAGTAAACTGTCTTCCTAGGAGGGAAGATGTCAAAGAGAAGCAGCCACACTGAGGCAGTGTTGTCTTTTGCTTTATTTTGCTTAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR TCA 90 bp | TACATTTTTACACATCATCACAGCCCTGCTTCTCTACAAGAAACATaGGGAACTAACTTAAAAATACACTTATTCCCTTGTAACCAGTCT | + |
|
Preference number: 1 (lower is better) Translates to: YIFTHHHSPASLQET*GTNLKIHLFPCNQS Trigger: AGACTGGTTACAAGGGAATAAGTGTATTTTTAAGTTAGTTCCTCATGTTTCTTGTAGAGAAGCAGGGCTGTGATGATGTGTAAAAATGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCAGGGTAGACTGTTGCTGGCATGCCATTGGGCTGCACCACCGTGGTGTGGTGCCTTGCTGGGCGTATaGACTCTGCTGGGGGTAGGC | + |
|
Preference number: 2 (lower is better) Translates to: EQGRLLLACHWAAPPWCGALLGV*TLLGVG Trigger: GCCTACCCCCAGCAGAGTCCATACGCCCAGCAAGGC...ACCACACCACGGTGGTGCAGCCCAATGGCATGCCAGCAACAGTCTACCCTGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| 3UTR-3UTR CCA 90 bp | TCAACAGTTCCAGGGCAAGTGTGTGAGGCTGATGTGATCAGCAGGAGGGCAGCATGGAGACTAGCGAGCTaGGACCTGCTGGGCTGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: STVPGQVCEADVISRRAAWRLAS*DLLGWG Trigger: GCCCCAGCCCAGCAGGTCCCAGCTCGCTAGTCTCCA...TGCTGCCCTCCTGCTGATCACATCAGCCTCACACACTTGCCCTGGAACTGTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR GCA 90 bp | CCGGGTGAGGGGCTACAGGAGTTGGAGAATGAGCAGTCAGCAGAGTACCTGCTGAGACTGTTGCTGGCATaGCATTGGGCTGCACCACCG | + |
|
Preference number: 2 (lower is better) Translates to: PGEGLQELENEQSAEYLLRLLLA*HWAAPP Trigger: CGGTGGTGCAGCCCAATGGCATGCCAGCAACAGTCT...CAGCAGGTACTCTGCTGACTGCTCATTCTCCAACTCCTGTAGCCCCTCACCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| 3UTR-3UTR CCA 90 bp | AATCCCAACCCTGCAAGTCACTCAGCACAGGGACGGGATCCCAACATGGAAGTACGAGCTGGGACCTGCTaGGCTGGGGCGCAGTCATGT | + |
|
Preference number: 2 (lower is better) Translates to: NPNPASHSAQGRDPNMEVRAGTC*AGAQSC Trigger: ACATGACTGCGCCCCAGCCCAGCAGGTCCCAGCTCG...TACTTCCATGTTGGGATCCCGTCCCTGTGCTGAGTGACTTGCAGGGTTGGGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR CAA 90 bp | GTAGCTGCCACACTTGCCACTGCACCCTGGGAGGTCCTGCACCACTaGGCAGTGCCAGATATACCACAAGTACAGATGCCAGCTGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: VAATLATAPWEVLHH*AVPDIPQVQMPAAE Trigger: CTCAGCAGCTGGCATCTGTACTTGTGGTATATCTGGCACTGCCAAGTGGTGCAGGACCTCCCAGGGTGCAGTGGCAAGTGTGGCAGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR GCA 90 bp | GCACTCCTGAACTGCCTGGCCCTTTCTGCTTTCCACATCTGCTTGGTACTGAGTGAGCTGCTGCAGGTGTaGTCTCTCTCCCCCAGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: ALLNCLALSAFHICLVLSELLQV*SLSPSP Trigger: GGGACTGGGGGAGAGAGAGCACACCTGCAGCAGCTC...ACTCAGTACCAAGCAGATGTGGAAAGCAGAAAGGGCCAGGCAGTTCAGGAGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAGCCCCAATGTGTAAAGCTGGTGCTTGCCAACCTCTCCCAACCACAGACACATGTGCAGGGTGTGCTTaGTGGTGCTACCCCTCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: AAPMCKAGACQPLPTTDTCAGCA*WCYPSP Trigger: GGGAGAGGGGTAGCACCAGCAAGCACACCCTGCACA...TGTGTCTGTGGTTGGGAGAGGTTGGCAAGCACCAGCTTTACACATTGGGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTGACCGGGTGAGGGGCTACAGGAGTTGGAGAATGAGCAGTCAGCAGAGTACCTTGCTGGCATGCCATTaGGCTGCACCACCGTGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: SDRVRGYRSWRMSSQQSTLLACH*AAPPWC Trigger: ACACCACGGTGGTGCAGCCCAATGGCATGCCAGCAA...GGTACTCTGCTGACTGCTCATTCTCCAACTCCTGTAGCCCCTCACCCGGTCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| 3UTR-3UTR TCA 90 bp | GAGCAGGGTAGACTGTTGCTGGCATGCCATTGGGCTGCACCACCGTGGTGTGGTTGGAACTCAATGAAGTaGCTGCACAGCTCCATCCTC | + |
|
Preference number: 2 (lower is better) Translates to: EQGRLLLACHWAAPPWCGWNSMK*LHSSIL Trigger: GAGGATGGAGCTGTGCAGTCACTTCATTGAGTTCCA...ACCACACCACGGTGGTGCAGCCCAATGGCATGCCAGCAACAGTCTACCCTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| 3UTR-3UTR TCA 90 bp | GCTGGGACCTGCTGGGCTGGGGCGCAGTCATGTTTAGCTAAGTGTCGGAGCAGTAGCTGTGGAACTCAATaGAGTGACTGCACAGCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: AGTCWAGAQSCLAKCRSSSCGTQ*SDCTAP Trigger: TGGAGCTGTGCAGTCACTTCATTGAGTTCCACAGCT...ACTGCTCCGACACTTAGCTAAACATGACTGCGCCCCAGCCCAGCAGGTCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTAAACTGCAAGCAGCAGCAGCCGAGGAAGGAAGGCCCCTAGCCTCAGGGACGACATCTGCTTGGTACTaGGTGCCTTCAGTGACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SKLQAAAAEEGRPLASGTTSAWY*VPSVTA Trigger: TGCTGTCACTGAAGGCACTCAGTACCAAGCAGATGT...CGTCCCTGAGGCTAGGGGCCTTCCTTCCTCGGCTGCTGCTGCTTGCAGTTTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTCCTCCAAGGAAGACCACAACACAGAGACAACAGTTGCAGAGGCCGCTTCCACCCCTCCCTCTCTCTTaGGAACTCAGGGCCTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: VPPRKTTTQRQQLQRPLPPLPLS*ELRACA Trigger: TGCACAGGCCCTGAGTTCTCAAGAGAGAGGGAGGGG...TGGAAGCGGCCTCTGCAACTGTTGTCTCTGTGTTGTGGTCTTCCTTGGAGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTCCTCCAAGGAAGACCACAACACAGAGACAACAGTTGCAGAGGCCGCTTCCAGCAGGGTGTGCTTGCTaGTGCTACCCCTCTCCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: VPPRKTTTQRQQLQRPLPAGCAC*CYPSPH Trigger: ATGGGGAGAGGGGTAGCACCAGCAAGCACACCCTGC...TGGAAGCGGCCTCTGCAACTGTTGTCTCTGTGTTGTGGTCTTCCTTGGAGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR CAA 90 bp | AGAGCACTCCTGAACTGCCTGGCCCTTTCTGCTTTCCACATCTGCTaGGTACTGAGTGCCTTCAGTGACAGCAGAGTGGCTTCCGCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: RALLNCLALSAFHIC*VLSAFSDSRVASAG Trigger: ACCTGCGGAAGCCACTCTGCTGTCACTGAAGGCACTCAGTACCAAGCAGATGTGGAAAGCAGAAAGGGCCAGGCAGTTCAGGAGTGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCCCCAATGTGTAAAGCTGGTGCTTGCCAACCTCTCCCAACCACAGACACAACACTCCAGCTGAAATaGAGGAGAGGGACCCCGTCA | + |
|
Preference number: 2 (lower is better) Translates to: AAPMCKAGACQPLPTTDTTLQLK*RRGTPS Trigger: TGACGGGGTCCCTCTCCTTCATTTCAGCTGGAGTGT...TGTGTCTGTGGTTGGGAGAGGTTGGCAAGCACCAGCTTTACACATTGGGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR GCA 90 bp | GCACTCCTGAACTGCCTGGCCCTTTCTGCTTTCCACATCTGCTTGGTACTGAGTGCTGCTGTCTGGAGCTaGTGCAGGTGTGCTCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: ALLNCLALSAFHICLVLSAAVWS*CRCALS Trigger: AGAGAGAGCACACCTGCAGCAGCTCCAGACAGCAGC...ACTCAGTACCAAGCAGATGTGGAAAGCAGAAAGGGCCAGGCAGTTCAGGAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR GCA 90 bp | AATCCCAACCCTGCAAGTCACTCAGCACAGGGACGGGATCCCAACATGGAAGTATCTCTGTGCAGGGTGTaGTTGCTGGTGCTACCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: NPNPASHSAQGRDPNMEVSLCRV*LLVLPL Trigger: GAGGGGTAGCACCAGCAAGCACACCCTGCACAGAGA...TACTTCCATGTTGGGATCCCGTCCCTGTGCTGAGTGACTTGCAGGGTTGGGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR TCA 90 bp | AATCCCAACCCTGCAAGTCACTCAGCACAGGGACGGGATCCCAACATGGAAGTAACACTCCAGCTGAAATaGAGGAGAGGGACCCCGTCA | + |
|
Preference number: 2 (lower is better) Translates to: NPNPASHSAQGRDPNMEVTLQLK*RRGTPS Trigger: TGACGGGGTCCCTCTCCTTCATTTCAGCTGGAGTGT...TACTTCCATGTTGGGATCCCGTCCCTGTGCTGAGTGACTTGCAGGGTTGGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCCCCAATGTGTAAAGCTGGTGCTTGCCAACCTCTCCCAACCACAGACACAAGCTGCTACTCAGGATaGCAACTGGTAGCCAACAGC | + |
|
Preference number: 2 (lower is better) Translates to: AAPMCKAGACQPLPTTDTSCYSG*QLVANS Trigger: GCTGTTGGCTACCAGTTGCCATCCTGAGTAGCAGCT...TGTGTCTGTGGTTGGGAGAGGTTGGCAAGCACCAGCTTTACACATTGGGGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTTACAGTTTCCAATACTCCACAACTCTAAACTGCAAGCAGCAGCAGCCGAGGGCTGCTGTCTGGAGCTaGTGCAGGTGTGCTCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: AYSFQYSTTLNCKQQQPRAAVWS*CRCALS Trigger: AGAGAGAGCACACCTGCAGCAGCTCCAGACAGCAGC...CCTCGGCTGCTGCTGCTTGCAGTTTAGAGTTGTGGAGTATTGGAAACTGTAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAGCCCCAATGTGTAAAGCTGGTGCTTGCCAACCTCTCCCAACCACAGACACAAGAACTCAGGGCCTGTaGATACACACACACTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: AAPMCKAGACQPLPTTDTRTQGL*IHTHCV Trigger: CACACAGTGTGTGTGTATGCACAGGCCCTGAGTTCT...TGTGTCTGTGGTTGGGAGAGGTTGGCAAGCACCAGCTTTACACATTGGGGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGGGGCTACAGGAGTTGGAGAATGAGCAGTCAGCAGAGTACCTGCTGACATGGGACGTGAGGAGGTGCTaGATACAGAGGTTGTGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: EGLQELENEQSAEYLLTWDVRRC*IQRLCV Trigger: TACACACAACCTCTGTATGCAGCACCTCCTCACGTC...CCATGTCAGCAGGTACTCTGCTGACTGCTCATTCTCCAACTCCTGTAGCCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| 3UTR-3UTR GCA 90 bp | AATCCCAACCCTGCAAGTCACTCAGCACAGGGACGGGATCCCAACATGGAAGTACTGCCTCAGTGTGGCTaGTTCTCTTTGACATCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: NPNPASHSAQGRDPNMEVLPQCG*FSLTSS Trigger: GGAAGATGTCAAAGAGAAGCAGCCACACTGAGGCAG...TACTTCCATGTTGGGATCCCGTCCCTGTGCTGAGTGACTTGCAGGGTTGGGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGGCAACTGGTAGCCAACAGCCACTCAACAGTTCCTCCAAGGAAGACCACAACTGGAAATCCCAACCCTaGAAGTCACTCAGCACAGGG | + |
|
Preference number: 2 (lower is better) Translates to: MATGSQQPLNSSSKEDHNWKSQP*KSLSTG Trigger: CCCTGTGCTGAGTGACTTGCAGGGTTGGGATTTCCA...GTTGTGGTCTTCCTTGGAGGAACTGTTGAGTGGCTGTTGGCTACCAGTTGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CCA 90 bp | GACTGCACAGCTCCATCCTCAAATATTAATTTGCAGGGCAATCACCACTGTGGGCTGACATGGCCATCGTaGTCCCAGCAACCATGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: DCTAPSSNINLQGNHHCGLTWPS*SQQPCP Trigger: TGGGCATGGTTGCTGGGACCACGATGGCCATGTCAG...CCCACAGTGGTGATTGCCCTGCAAATTAATATTTGAGGATGGAGCTGTGCAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| 3UTR-3UTR TCA 90 bp | TGGGCTGGGGCGCAGTCATGTTTAGCTAAGTGTCGGAGCAGTAAGAAGAAAGTCTGGAACTCAATGAAGTaGCTGCACAGCTCCATCCTC | + |
|
Preference number: 2 (lower is better) Translates to: WAGAQSCLAKCRSSKKKVWNSMK*LHSSIL Trigger: GAGGATGGAGCTGTGCAGTCACTTCATTGAGTTCCA...GACTTTCTTCTTACTGCTCCGACACTTAGCTAAACATGACTGCGCCCCAGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTGGGGCGCAGTCATGTTTAGCTAAGTGTCGGAGCAGTAAGAAGAAAGTCCTGTGGAACTCAATGAAGTaGCTGCACAGCTCCATCCTC | + |
|
Preference number: 2 (lower is better) Translates to: AGAQSCLAKCRSSKKKVLWNSMK*LHSSIL Trigger: GAGGATGGAGCTGTGCAGTCACTTCATTGAGTTCCA...CAGGACTTTCTTCTTACTGCTCCGACACTTAGCTAAACATGACTGCGCCCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGGGCTGGGGCGCAGTCATGTTTAGCTAAGTGTCGGAGCAGTAAGAAGAAATGGAACTCAATGAAGTaGCTGCACAGCTCCATCCTC | + |
|
Preference number: 2 (lower is better) Translates to: CWAGAQSCLAKCRSSKKKWNSMK*LHSSIL Trigger: GAGGATGGAGCTGTGCAGTCACTTCATTGAGTTCCA...TTTCTTCTTACTGCTCCGACACTTAGCTAAACATGACTGCGCCCCAGCCCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTCGGGCACACTCAGGCAGAAAGAACTTTTGTGGTTTCTTATGTACACACTCACGTACATCGCAGAGGTaGGTGAGGGACAGGACAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SRAHSGRKNFCGFLCTHSRTSQR*VRDRTG Trigger: GCCTGTCCTGTCCCTCACGCACCTCTGCGATGTACG...TGAGTGTGTACATAAGAAACCACAAAAGTTCTTTCTGCCTGAGTGTGCCCGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAAAGCACACTGTCTTGGAATGTTCCTCAATGTTTTGGGATACCTGTACAGCCGGGTGTGCTTGCTGGTaGTACCCCTCTCCCCATGCA | + |
|
Preference number: 2 (lower is better) Translates to: RKHTVLECSSMFWDTCTAGCACW*YPSPHA Trigger: TGCATGGGGAGAGGGGTAGCACCAGCAAGCACACCC...GGCTGTACAGGTATCCCAAAACATTGAGGAACATTCCAAGACAGTGTGCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGGCAACTGGTAGCCAACAGCCACTCAACAGTTCCTCCAAGGAAGACCACAACAGAACTCAGGGCCTGTaGATACACACACACTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: MATGSQQPLNSSSKEDHNRTQGL*IHTHCV Trigger: CACACAGTGTGTGTGTATGCACAGGCCCTGAGTTCT...GTTGTGGTCTTCCTTGGAGGAACTGTTGAGTGGCTGTTGGCTACCAGTTGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTGATGACCTGATAGCTTCAAAACAGACAAGATTTCCACCCAGCCGAGTTGTAGCTGCTGCTGCTGTCTaGAGCTGCTGCAGGTGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SDDLIASKQTRFPPSRVVAAAAV*SCCRCA Trigger: AGCACACCTGCAGCAGCTCCAGACAGCAGCAGCAGC...TACAACTCGGCTGGGTGGAAATCTTGTCTGTTTTGAAGCTATCAGGTCATCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCATCCTCAAATATTAATTTGCAGGGCAATCACCACTGTGGGGGCACATAGCAGGGTAGACTGTTGCTaGCATGCCATTGGGCTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: LHPQILICRAITTVGAHSRVDCC*HAIGLH Trigger: GTGCAGCCCAATGGCATGCCAGCAACAGTCTACCCT...GCTATGTGCCCCCACAGTGGTGATTGCCCTGCAAATTAATATTTGAGGATGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| 3UTR-3UTR TCA 90 bp | TCTAAAGAAATCCCCTTCTGTCTGATGAGTCCAGAGAAAACTTGGAAATCCCAACATCGCAGAGGTGCGTaGGGGACAGGACAGGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SKEIPFCLMSPEKTWKSQHRRGA*GTGQAV Trigger: CACAGCCTGTCCTGTCCCTCACGCACCTCTGCGATG...TTGGGATTTCCAAGTTTTCTCTGGACTCATCAGACAGAAGGGGATTTCTTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGCTTCTCTTTGACATCTTCCCTCCTAGGAAGACAGTTTACTTCTACAATGGACGTACATCGCAGAGGTaGGTGAGGGACAGGACAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LLLFDIFPPRKTVYFYNGRTSQR*VRDRTG Trigger: GCCTGTCCTGTCCCTCACGCACCTCTGCGATGTACG...TCCATTGTAGAAGTAAACTGTCTTCCTAGGAGGGAAGATGTCAAAGAGAAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTAAAGAAATCCCCTTCTGTCTGATGAGTCCAGAGAAAACTTGGAAATCCCAAGAGCTGCTGCAGGTGTaGTCTCTCTCCCCCAGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: SKEIPFCLMSPEKTWKSQELLQV*SLSPSP Trigger: GGGACTGGGGGAGAGAGAGCACACCTGCAGCAGCTC...TTGGGATTTCCAAGTTTTCTCTGGACTCATCAGACAGAAGGGGATTTCTTTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCTGCCTGCCTGTCAATTCAGCTGAAGGACTCTAGTCAGGAATGTCACACTCAGCTGAAGTCTTTGTaGGAGAATACAGCAGTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: LSACLSIQLKDSSQECHTQLKSL*ENTAVP Trigger: GGGCACTGCTGTATTCTCCCACAAAGACTTCAGCTG...AGTGTGACATTCCTGACTAGAGTCCTTCAGCTGAATTGACAGGCAGGCAGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGCTTCTCTTTGACATCTTCCCTCCTAGGAAGACAGTTTACTTCTACAATGGATGGCAGACCCTGCTCTaGCACACAGACCACTCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LLLFDIFPPRKTVYFYNGWQTLL*HTDHSS Trigger: TGAGGAGTGGTCTGTGTGTCAGAGCAGGGTCTGCCA...TCCATTGTAGAAGTAAACTGTCTTCCTAGGAGGGAAGATGTCAAAGAGAAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGGAACTCAATGAAGTGACTGCACAGCTCCATCCTCAAATATTAATTTGCAGGCCGTGGTGTGGTGAATaGCGTGAGGAGGTGCTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: VELNEVTAQLHPQILICRPWCGE*REEVLH Trigger: ATGCAGCACCTCCTCACGTCATTCACCACACCACGG...CCTGCAAATTAATATTTGAGGATGGAGCTGTGCAGTCACTTCATTGAGTTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| 3UTR-3UTR TCA 90 bp | CTCCATCCTCAAATATTAATTTGCAGGGCAATCACCACTGTGGGGGCACATAGCACAGGAGTTGGAGAATaGGCAGTCAGCAGAGTACCT | + |
|
Preference number: 2 (lower is better) Translates to: LHPQILICRAITTVGAHSTGVGE*AVSRVP Trigger: AGGTACTCTGCTGACTGCTCATTCTCCAACTCCTGT...GCTATGTGCCCCCACAGTGGTGATTGCCCTGCAAATTAATATTTGAGGATGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| 3UTR-3UTR GCA 90 bp | GCAGCCCCAATGTGTAAAGCTGGTGCTTGCCAACCTCTCCCAACCACAGACACACCACAAAACAGGATTTaGTTTAAAACCAACCCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: AAPMCKAGACQPLPTTDTPQNRI*FKTNPE Trigger: CTCTGGGTTGGTTTTAAAGCAAATCCTGTTTTGTGG...TGTGTCTGTGGTTGGGAGAGGTTGGCAAGCACCAGCTTTACACATTGGGGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR GCA 90 bp | ATAGAAAGCACACTGTCTTGGAATGTTCCTCAATGTTTTGGGATACCTGTACAGCTCTCCCCCAGTCCCTaGAGCTCCCTCAGGATCAGT | + |
|
Preference number: 2 (lower is better) Translates to: IESTLSWNVPQCFGIPVQLSPSP*SSLRIS Trigger: ACTGATCCTGAGGGAGCTGCAGGGACTGGGGGAGAG...CTGTACAGGTATCCCAAAACATTGAGGAACATTCCAAGACAGTGTGCTTTCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAAAGCACACTGTCTTGGAATGTTCCTCAATGTTTTGGGATACCTGTACAGCCGAAGAAAGTCCTGGTTaGAGGCACAAGGCCTGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: RKHTVLECSSMFWDTCTAEESPG*RHKACS Trigger: GCTGCAGGCCTTGTGCCTCCAACCAGGACTTTCTTC...GGCTGTACAGGTATCCCAAAACATTGAGGAACATTCCAAGACAGTGTGCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGACTGCACAGCTCCATCCTCAAATATTAATTTGCAGGGCAATCACCACTGTGAGGGGCTACAGGAGTTaGAGAATGAGCAGTCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: VTAQLHPQILICRAITTVRGYRS*RMSSQQ Trigger: CTGCTGACTGCTCATTCTCCAACTCCTGTAGCCCCT...CACAGTGGTGATTGCCCTGCAAATTAATATTTGAGGATGGAGCTGTGCAGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| 3UTR-3UTR GCA 90 bp | GCACTCCTGAACTGCCTGGCCCTTTCTGCTTTCCACATCTGCTTGGTACTGAGTCCACAAAACAGGATTTaGTTTAAAACCAACCCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: ALLNCLALSAFHICLVLSPQNRI*FKTNPE Trigger: CTCTGGGTTGGTTTTAAAGCAAATCCTGTTTTGTGG...ACTCAGTACCAAGCAGATGTGGAAAGCAGAAAGGGCCAGGCAGTTCAGGAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR GCA 90 bp | CAACAGCCACTCAACAGTTCCTCCAAGGAAGACCACAACACAGAGACAACAGTTTCTGCTTTCCACATCTaGTTGGTACTGAGTGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: QQPLNSSSKEDHNTETTVSAFHI*LVLSAF Trigger: GAAGGCACTCAGTACCAAGCAGATGTGGAAAGCAGA...AACTGTTGTCTCTGTGTTGTGGTCTTCCTTGGAGGAACTGTTGAGTGGCTGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR GCA 90 bp | GACTGCACAGCTCCATCCTCAAATATTAATTTGCAGGGCAATCACCACTGTGGGAATGACGTGAGGAGGTaGTGCATACAGAGGTTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: DCTAPSSNINLQGNHHCGNDVRR*CIQRLC Trigger: ACACAACCTCTGTATGCAGCACCTCCTCACGTCATT...CCCACAGTGGTGATTGCCCTGCAAATTAATATTTGAGGATGGAGCTGTGCAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| 3UTR-3UTR TCA 90 bp | CTCTCTGCCTGCCTGTCAATTCAGCTGAAGGACTCTAGTCAGGAATGTCACACTTTCGGGTTTTGCATATaGTGGTTTTGCATCAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LSACLSIQLKDSSQECHTFGFCI*WFCISH Trigger: GTGACTGATGCAAAACCATCATATGCAAAACCCGAA...AGTGTGACATTCCTGACTAGAGTCCTTCAGCTGAATTGACAGGCAGGCAGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTTACAGTTTCCAATACTCCACAACTCTAAACTGCAAGCAGCAGCAGCCGAGGTTCGGGTTTTGCATATaGTGGTTTTGCATCAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: AYSFQYSTTLNCKQQQPRFGFCI*WFCISH Trigger: GTGACTGATGCAAAACCATCATATGCAAAACCCGAA...CCTCGGCTGCTGCTGCTTGCAGTTTAGAGTTGTGGAGTATTGGAAACTGTAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTTACAGTTTCCAATACTCCACAACTCTAAACTGCAAGCAGCAGCAGCCGAGGACATCATCACAGCCCTaGTTCTCTACAAGAAACATG | + |
|
Preference number: 2 (lower is better) Translates to: AYSFQYSTTLNCKQQQPRTSSQP*FSTRNM Trigger: CATGTTTCTTGTAGAGAAGCAGGGCTGTGATGATGT...CCTCGGCTGCTGCTGCTTGCAGTTTAGAGTTGTGGAGTATTGGAAACTGTAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTAAAGAAATCCCCTTCTGTCTGATGAGTCCAGAGAAAACTTGGAAATCCCAAGAAGAAAGTCCTGGTTaGAGGCACAAGGCCTGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SKEIPFCLMSPEKTWKSQEESPG*RHKACS Trigger: GCTGCAGGCCTTGTGCCTCCAACCAGGACTTTCTTC...TTGGGATTTCCAAGTTTTCTCTGGACTCATCAGACAGAAGGGGATTTCTTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGGAACTCAATGAAGTGACTGCACAGCTCCATCCTCAAATATTAATTTGCAGGCAACCCAGAGTTAGTTaGAGACTAGCGAGCTGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: VELNEVTAQLHPQILICRQPRVS*RLASWD Trigger: GTCCCAGCTCGCTAGTCTCCAACTAACTCTGGGTTG...CCTGCAAATTAATATTTGAGGATGGAGCTGTGCAGTCACTTCATTGAGTTCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| 3UTR CAA 90 bp | CTAATTGAACTGGCTTGGGATGGACAGTCTGCCCGTTCCTTTGTTTaGACACATAAGTTCCATGAAGAGGCAAGGGATGCCTTTAACACT | + |
|
Preference number: 2 (lower is better) Translates to: LIELAWDGQSARSFV*THKFHEEARDAFNT Trigger: AGTGTTAAAGGCATCCCTTGCCTCTTCATGGAACTTATGTGTCAAAACAAAGGAACGGGCAGACTGTCCATCCCAAGCCAGTTCAATTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCTCTGCCTGCCTGTCAATTCAGCTGAAGGACTCTAGTCAGGAATGTCACACTCATAGACATAAGGAATaGGGAATCTTCTGTTCACAC | + |
|
Preference number: 2 (lower is better) Translates to: LSACLSIQLKDSSQECHTHRHKE*GIFCSH Trigger: GTGTGAACAGAAGATTCCTCATTCCTTATGTCTATG...AGTGTGACATTCCTGACTAGAGTCCTTCAGCTGAATTGACAGGCAGGCAGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTAAAGAAATCCCCTTCTGTCTGATGAGTCCAGAGAAAACTTGGAAATCCCAACTGCCTCAGTGTGGCTaGTTCTCTTTGACATCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SKEIPFCLMSPEKTWKSQLPQCG*FSLTSS Trigger: GGAAGATGTCAAAGAGAAGCAGCCACACTGAGGCAG...TTGGGATTTCCAAGTTTTCTCTGGACTCATCAGACAGAAGGGGATTTCTTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAGAAAGCACACTGTCTTGGAATGTTCCTCAATGTTTTGGGATACCTGTACAGGTAAGAAGAAAGTCCTaGTTGGAGGCACAAGGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: IESTLSWNVPQCFGIPVQVRRKS*LEAQGL Trigger: CAGGCCTTGTGCCTCCAACCAGGACTTTCTTCTTAC...CTGTACAGGTATCCCAAAACATTGAGGAACATTCCAAGACAGTGTGCTTTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAAAGCACACTGTCTTGGAATGTTCCTCAATGTTTTGGGATACCTGTACAGCCAGTCCAGAGAAAACTTaGAAATCCCAACCCTGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: RKHTVLECSSMFWDTCTASPEKT*KSQPCK Trigger: CTTGCAGGGTTGGGATTTCCAAGTTTTCTCTGGACT...GGCTGTACAGGTATCCCAAAACATTGAGGAACATTCCAAGACAGTGTGCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTGATGACCTGATAGCTTCAAAACAGACAAGATTTCCACCCAGCCGAGTTGTAACATCATCACAGCCCTaGTTCTCTACAAGAAACATG | + |
|
Preference number: 2 (lower is better) Translates to: SDDLIASKQTRFPPSRVVTSSQP*FSTRNM Trigger: CATGTTTCTTGTAGAGAAGCAGGGCTGTGATGATGT...TACAACTCGGCTGGGTGGAAATCTTGTCTGTTTTGAAGCTATCAGGTCATCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR CAA 90 bp | AAAATAAAGCAAAAGACAACACTGCCTCAGTGTGGCTGCTTCTCTTaGACATCTTCCCTCCTAGGAAGACAGTTTACTTCTACAATGGAC | + |
|
Preference number: 2 (lower is better) Translates to: KIKQKTTLPQCGCFS*TSSLLGRQFTSTMD Trigger: GTCCATTGTAGAAGTAAACTGTCTTCCTAGGAGGGAAGATGTCAAAGAGAAGCAGCCACACTGAGGCAGTGTTGTCTTTTGCTTTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAAAGCACACTGTCTTGGAATGTTCCTCAATGTTTTGGGATACCTGTACAGCCTCACTGCAGGTAGATTaGGCAAGCTTTGTTTTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: RKHTVLECSSMFWDTCTASLQVD*ASFVFV Trigger: AACAAAAACAAAGCTTGCTCAATCTACCTGCAGTGA...GGCTGTACAGGTATCCCAAAACATTGAGGAACATTCCAAGACAGTGTGCTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGCTTCTCTTTGACATCTTCCCTCCTAGGAAGACAGTTTACTTCTACAATGGATCACTGCAGGTAGATTaGGCAAGCTTTGTTTTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: LLLFDIFPPRKTVYFYNGSLQVD*ASFVFV Trigger: AACAAAAACAAAGCTTGCTCAATCTACCTGCAGTGA...TCCATTGTAGAAGTAAACTGTCTTCCTAGGAGGGAAGATGTCAAAGAGAAGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTGATGACCTGATAGCTTCAAAACAGACAAGATTTCCACCCAGCCGAGTTGTACAGAAAGAACTTTTGTaGTTTCTTATGTACACACTC | + |
|
Preference number: 2 (lower is better) Translates to: SDDLIASKQTRFPPSRVVQKELL*FLMYTL Trigger: GAGTGTGTACATAAGAAACCACAAAAGTTCTTTCTG...TACAACTCGGCTGGGTGGAAATCTTGTCTGTTTTGAAGCTATCAGGTCATCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | GGAGAGGGACCCCGTCATCCCTGCTGCTGCTGCTGCTaGTGTCTGGAGCTGCTGCAGGTGTGCTCTCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GEGPRHPCCCCC*CLELLQVCSLS Trigger: GGAGAGAGAGCACACCTGCAGCAGCTCCAGACAGCAGCAGCAGCAGCAGCAGGGATGACGGGGTCCCTCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | ATCCCTGCTGCTGCTGCTGCTGCTGTCTGGAGCTGCTaGAGGTGTGCTCTCTCTCCCCCAGTCCCTGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: IPAAAAAAVWSC*RCALSPPVPAA Trigger: AGCTGCAGGGACTGGGGGAGAGAGAGCACACCTGCAGCAGCTCCAGACAGCAGCAGCAGCAGCAGCAGGGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | GTCATCCCTGCTGCTGCTGCTGCTGCTGTCTGGAGCTaGTGCAGGTGTGCTCTCTCTCCCCCAGTCCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: VIPAAAAAAVWS*CRCALSPPVPA Trigger: TGCAGGGACTGGGGGAGAGAGAGCACACCTGCAGCAGCTCCAGACAGCAGCAGCAGCAGCAGCAGGGATGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | GTGCTCCAGCAAGCGTGTCTATCTCTGTGCAGGGTGTaGTTGCTGGTGCTACCCCTCTCCCCATGCACGCGC | + |
|
Preference number: 3 (lower is better) Translates to: VLQQACLSLCRV*LLVLPLSPCTR Trigger: GCGCGTGCATGGGGAGAGGGGTAGCACCAGCAAGCACACCCTGCACAGAGATAGACACGCTTGCTGGAGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | CCAGAGGAAAGGACCAGTAGCTGCCACACTTGCCACTaGACCCTGGGAGGTCCTGCACCACTTGGCAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PEERTSSCHTCH*TLGGPAPLGSA Trigger: GGCACTGCCAAGTGGTGCAGGACCTCCCAGGGTGCAGTGGCAAGTGTGGCAGCTACTGGTCCTTTCCTCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR TCA 72 bp | AACCTCTCCCAACCACAGACACACTCAGAGGGCCAATaGGAAGGCAGGGAGCTCAAGCCTCCCCCTCCCGGA | + |
|
Preference number: 3 (lower is better) Translates to: NLSQPQTHSEGQ*EGRELKPPPPG Trigger: TCCGGGAGGGGGAGGCTTGAGCTCCCTGCCTTCTCATTGGCCCTCTGAGTGTGTCTGTGGTTGGGAGAGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | AATGAAGGAGAGGGACCCCGTCATCCCTGCTGCTGCTaGTGCTGCTGTCTGGAGCTGCTGCAGGTGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: NEGEGPRHPCCC*CCCLELLQVCS Trigger: AGAGCACACCTGCAGCAGCTCCAGACAGCAGCAGCAGCAGCAGCAGGGATGACGGGGTCCCTCTCCTTCATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | TGCAGGGTGTGCTTGCTGGTGCTACCCCTCTCCCCATaGACGCGCACATCCAAGCACACACACACACACGCA | + |
|
Preference number: 3 (lower is better) Translates to: CRVCLLVLPLSP*TRTSKHTHTHA Trigger: TGCGTGTGTGTGTGTGTGCTTGGATGTGCGCGTGCATGGGGAGAGGGGTAGCACCAGCAAGCACACCCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | GCAGGCTGTGTGCTCCAGCAAGCGTGTCTATCTCTGTaGAGGGTGTGCTTGCTGGTGCTACCCCTCTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: AGCVLQQACLSL*RVCLLVLPLSP Trigger: TGGGGAGAGGGGTAGCACCAGCAAGCACACCCTGCACAGAGATAGACACGCTTGCTGGAGCACACAGCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR TCA 72 bp | GAAGGCAGGGAGCTCAAGCCTCCCCCTCCCGGAGACTaGCTTTCCTCTCACCGGACTGTAAAACACCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: EGRELKPPPPGD*LSSHRTVKHPV Trigger: GACTGGGTGTTTTACAGTCCGGTGAGAGGAAAGTCAGTCTCCGGGAGGGGGAGGCTTGAGCTCCCTGCCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | AAGCGTGTCTATCTCTGTGCAGGGTGTGCTTGCTGGTaGTACCCCTCTCCCCATGCACGCGCACATCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: KRVYLCAGCACW*YPSPHARAHPS Trigger: GCTTGGATGTGCGCGTGCATGGGGAGAGGGGTAGCACCAGCAAGCACACCCTGCACAGAGATAGACACGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | TCCAGCAAGCGTGTCTATCTCTGTGCAGGGTGTGCTTaGTGGTGCTACCCCTCTCCCCATGCACGCGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: SSKRVYLCAGCA*WCYPSPHARAH Trigger: ATGTGCGCGTGCATGGGGAGAGGGGTAGCACCAGCAAGCACACCCTGCACAGAGATAGACACGCTTGCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | TCTGCACCAGACGTACCCACTGCCCTCCCTGGGAACTaGCTGTATACCCACCAGGTCCTCACAGCTCATGAG | + |
|
Preference number: 3 (lower is better) Translates to: SAPDVPTALPGN*LYTHQVLTAHE Trigger: CTCATGAGCTGTGAGGACCTGGTGGGTATACAGGCAGTTCCCAGGGAGGGCAGTGGGTACGTCTGGTGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | TATACACTGCCCACGGTCTGCACCAGACGTACCCACTaGCCTCCCTGGGAACTGCCTGTATACCCACCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: YTLPTVCTRRTH*PPWELPVYPPG Trigger: ACCTGGTGGGTATACAGGCAGTTCCCAGGGAGGGCAGTGGGTACGTCTGGTGCAGACCGTGGGCAGTGTATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | AGTCTGTCCCAACTGCTCTATACACTGCCCACGGTCTaGACCAGACGTACCCACTGCCCTCCCTGGGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: SLSQLLYTLPTV*TRRTHCPPWEL Trigger: CAGTTCCCAGGGAGGGCAGTGGGTACGTCTGGTGCAGACCGTGGGCAGTGTATAGAGCAGTTGGGACAGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR CCA 72 bp | AGCAAGCGTGTCTATCTCTGTGCAGGGTGTGCTTGCTaGTGCTACCCCTCTCCCCATGCACGCGCACATCCA | + |
|
Preference number: 3 (lower is better) Translates to: SKRVYLCAGCAC*CYPSPHARAHP Trigger: TGGATGTGCGCGTGCATGGGGAGAGGGGTAGCACCAGCAAGCACACCCTGCACAGAGATAGACACGCTTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR CCA 72 bp | CTGCAAGTCACTCAGCACAGGGACGGGATCCCAACATaGAAGTACGGGTGCAGGCTGTGTGCTCCAGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LQVTQHRDGIPT*KYGCRLCAPAS Trigger: GCTTGCTGGAGCACACAGCCTGCACCCGTACTTCCATGTTGGGATCCCGTCCCTGTGCTGAGTGACTTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR TCA 72 bp | TCAGGTAGACCCCTGTTCTGCAGAGCACACTCCAGCTaGAATGAAGGAGAGGGACCCCGTCATCCCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SGRPLFCRAHSS*NEGEGPRHPCC Trigger: GCAGCAGGGATGACGGGGTCCCTCTCCTTCATTTCAGCTGGAGTGTGCTCTGCAGAACAGGGGTCTACCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | CGGGATCCCAACATGGAAGTACGGGTGCAGGCTGTGTaGTCCAGCAAGCGTGTCTATCTCTGTGCAGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RDPNMEVRVQAV*SSKRVYLCAGC Trigger: ACACCCTGCACAGAGATAGACACGCTTGCTGGAGCACACAGCCTGCACCCGTACTTCCATGTTGGGATCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | CCACTGCACCCTGGGAGGTCCTGCACCACTTGGCAGTaGCAGATATACCACAAGTACAGATGCCAGCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PLHPGRSCTTWQ*QIYHKYRCQLL Trigger: CAGCAGCTGGCATCTGTACTTGTGGTATATCTGGCACTGCCAAGTGGTGCAGGACCTCCCAGGGTGCAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCAGGGTAGACTGTTGCTGGCATGCCATTGGGCTGCACCACCGTGGTGTGGTTGCTGCATACAGAGGTaGTGTGTAGTACGTGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: EQGRLLLACHWAAPPWCGCCIQR*CVVRAL Trigger: CAAGGCACGTACTACACACAACCTCTGTATGCAGCA...ACCACACCACGGTGGTGCAGCCCAATGGCATGCCAGCAACAGTCTACCCTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| 3UTR TCA 72 bp | GCCTGGCCCTTTCTGCTTTCCACATCTGCTTGGTACTaGGTGCCTTCAGTGACAGCAGAGTGGCTTCCGCAG | + |
|
Preference number: 3 (lower is better) Translates to: AWPFLLSTSAWY*VPSVTAEWLPQ Trigger: CTGCGGAAGCCACTCTGCTGTCACTGAAGGCACTCAGTACCAAGCAGATGTGGAAAGCAGAAAGGGCCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR TCA 72 bp | TTTCAACAGTTCCAGGGCAAGTGTGTGAGGCTGATGTaGTCAGCAGGAGGGCAGCAGCCCCTCCCTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FQQFQGKCVRLM*SAGGQQPLPLS Trigger: AGAGAGAGGGAGGGGCTGCTGCCCTCCTGCTGATCACATCAGCCTCACACACTTGCCCTGGAACTGTTGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR TCA 72 bp | GCATGCCATTGGGCTGCACCACCGTGGTGTGGTGAATaGCGTGAGGAGGTGCTGCATACAGAGGTTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: ACHWAAPPWCGE*REEVLHTEVVC Trigger: ACACACAACCTCTGTATGCAGCACCTCCTCACGTCATTCACCACACCACGGTGGTGCAGCCCAATGGCATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| 3UTR GCA 72 bp | GCAGCCCCTCCCTCTCTCTTGAGAACTCAGGGCCTGTaGATACACACACACTGTGTGTTGCTGCAAGTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: AAPPSLLRTQGL*IHTHCVLLQVG Trigger: GCCTACTTGCAGCAACACACAGTGTGTGTGTATGCACAGGCCCTGAGTTCTCAAGAGAGAGGGAGGGGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | GGACACGAGAGGAAGCTCTACTGCACACCTGCCCTCTaGAACCCTCAGAAAGCACCAGAGGAAAGGACCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GHERKLYCTPAL*NPQKAPEERTS Trigger: ACTGGTCCTTTCCTCTGGTGCTTTCTGAGGGTTGCAGAGGGCAGGTGTGCAGTAGAGCTTCCTCTCGTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | GTGAGCAGGACACGAGAGGAAGCTCTACTGCACACCTaGCCTCTGCAACCCTCAGAAAGCACCAGAGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VSRTREEALLHT*PLQPSESTRGK Trigger: CTTTCCTCTGGTGCTTTCTGAGGGTTGCAGAGGGCAGGTGTGCAGTAGAGCTTCCTCTCGTGTCCTGCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR CCA 72 bp | CACTTGCCACTGCACCCTGGGAGGTCCTGCACCACTTaGCAGTGCCAGATATACCACAAGTACAGATGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: HLPLHPGRSCTT*QCQIYHKYRCQ Trigger: CTGGCATCTGTACTTGTGGTATATCTGGCACTGCCAAGTGGTGCAGGACCTCCCAGGGTGCAGTGGCAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCCCCAATGTGTAAAGCTGGTGCTTGCCAACCTCTCCCAACCACAGACACAAGAAGAAAGTCCTGGTaGGAGGCACAAGGCCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: AAPMCKAGACQPLPTTDTRRKSW*EAQGLQ Trigger: CTGCAGGCCTTGTGCCTCCAACCAGGACTTTCTTCT...TGTGTCTGTGGTTGGGAGAGGTTGGCAAGCACCAGCTTTACACATTGGGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR TCA 72 bp | CAGAGAGGTCCTCGTGCCCTGCCCTTTGACCCACACTaGACAGAAACACTCTCACAGATTCAAGTCGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: QRGPRALPFDPH*TETLSQIQVGH Trigger: GTGCCCGACTTGAATCTGTGAGAGTGTTTCTGTTCAGTGTGGGTCAAAGGGCAGGGCACGAGGACCTCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR CCA 72 bp | CCCTGCTCTGACACACAGACCACTCCTCACCCCAGCTaGACTCGTCACCAAGCTCCTGTATTTCCTGATAAG | + |
|
Preference number: 3 (lower is better) Translates to: PCSDTQTTPHPS*TRHQAPVFPDK Trigger: CTTATCAGGAAATACAGGAGCTTGGTGACGAGTCCAGCTGGGGTGAGGAGTGGTCTGTGTGTCAGAGCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACTCCTGAACTGCCTGGCCCTTTCTGCTTTCCACATCTGCTTGGTACTGAGTAGAAGAAAGTCCTGGTaGGAGGCACAAGGCCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ALLNCLALSAFHICLVLSRRKSW*EAQGLQ Trigger: CTGCAGGCCTTGTGCCTCCAACCAGGACTTTCTTCT...ACTCAGTACCAAGCAGATGTGGAAAGCAGAAAGGGCCAGGCAGTTCAGGAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCATCCTCAAATATTAATTTGCAGGGCAATCACCACTGTGGGGGCACATAGCGTTGCTGGCATGCCATaGGGCTGCACCACCGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LHPQILICRAITTVGAHSVAGMP*GCTTVV Trigger: CACCACGGTGGTGCAGCCCAATGGCATGCCAGCAAC...GCTATGTGCCCCCACAGTGGTGATTGCCCTGCAAATTAATATTTGAGGATGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| 3UTR TCA 72 bp | TTTCCCACCACAGAGCCTTCCAAGCAAGAGCACTCCTaGACTGCCTGGCCCTTTCTGCTTTCCACATCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: FPTTEPSKQEHS*TAWPFLLSTSA Trigger: AGCAGATGTGGAAAGCAGAAAGGGCCAGGCAGTTCAGGAGTGCTCTTGCTTGGAAGGCTCTGTGGTGGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | TGTAAGACATACAGAGAAAACTCGGATGGCAGACCCTaGTCTGACACACAGACCACTCCTCACCCCAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: CKTYRENSDGRP*SDTQTTPHPSW Trigger: CCAGCTGGGGTGAGGAGTGGTCTGTGTGTCAGAGCAGGGTCTGCCATCCGAGTTTTCTCTGTATGTCTTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | CTCCTGAACTGCCTGGCCCTTTCTGCTTTCCACATCTaGTTGGTACTGAGTGCCTTCAGTGACAGCAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LLNCLALSAFHI*LVLSAFSDSRV Trigger: CACTCTGCTGTCACTGAAGGCACTCAGTACCAAGCAGATGTGGAAAGCAGAAAGGGCCAGGCAGTTCAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | CACCACAGAGCCTTCCAAGCAAGAGCACTCCTGAACTaGCTGGCCCTTTCTGCTTTCCACATCTGCTTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: HHRAFQARALLN*LALSAFHICLV Trigger: TACCAAGCAGATGTGGAAAGCAGAAAGGGCCAGGCAGTTCAGGAGTGCTCTTGCTTGGAAGGCTCTGTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCTCCAAGGAAGACCACAACACAGAGACAACAGTTGCAGAGGCCGCTTCCAGCTTTCCACATCTGCTaGGTACTGAGTGCCTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: VPPRKTTTQRQQLQRPLPAFHIC*VLSAFS Trigger: ACTGAAGGCACTCAGTACCAAGCAGATGTGGAAAGC...TGGAAGCGGCCTCTGCAACTGTTGTCTCTGTGTTGTGGTCTTCCTTGGAGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTAAACTGCAAGCAGCAGCAGCCGAGGAAGGAAGGCCCCTAGCCTCAGGGACGAGAAAGCACACTGTCTaGGAATGTTCCTCAATGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SKLQAAAAEEGRPLASGTRKHTV*ECSSMF Trigger: AAACATTGAGGAACATTCCAAGACAGTGTGCTTTCT...CGTCCCTGAGGCTAGGGGCCTTCCTTCCTCGGCTGCTGCTGCTTGCAGTTTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCTCCAAGGAAGACCACAACACAGAGACAACAGTTGCAGAGGCCGCTTCCAAGTAGGCTCAAAGACTaGGTAACTTCCTGCTGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: VPPRKTTTQRQQLQRPLPSRLKD*VTSCCR Trigger: CCTACAGCAGGAAGTTACCAAGTCTTTGAGCCTACT...TGGAAGCGGCCTCTGCAACTGTTGTCTCTGTGTTGTGGTCTTCCTTGGAGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | CTGATGAGTCCAGAGAAAACTTGGAAATCCCAACCCTaGAAGTCACTCAGCACAGGGACGGGATCCCAACAT | + |
|
Preference number: 3 (lower is better) Translates to: LMSPEKTWKSQP*KSLSTGTGSQH Trigger: ATGTTGGGATCCCGTCCCTGTGCTGAGTGACTTGCAGGGTTGGGATTTCCAAGTTTTCTCTGGACTCATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | ACCACTTGGCAGTGCCAGATATACCACAAGTACAGATaGCAGCTGCTGAGAGAAGGTGGCCCCACAGTAATA | + |
|
Preference number: 3 (lower is better) Translates to: TTWQCQIYHKYR*QLLREGGPTVI Trigger: TATTACTGTGGGGCCACCTTCTCTCAGCAGCTGGCATCTGTACTTGTGGTATATCTGGCACTGCCAAGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CAA 90 bp | GAACTGCCTGGCCCTTTCTGCTTTCCACATCTGCTTGGTACTGAGTGCCTTCAGCCAGTCCTTCGGGTTTaGCATATGATGGTTTTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: ELPGPFCFPHLLGTECLQPVLRV*HMMVLH Trigger: ATGCAAAACCATCATATGCAAAACCCGAAGGACTGG...CTGAAGGCACTCAGTACCAAGCAGATGTGGAAAGCAGAAAGGGCCAGGCAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCCCCAATGTGTAAAGCTGGTGCTTGCCAACCTCTCCCAACCACAGACACAATGTTCCTCAATGTTTaGGGATACCTGTACAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: AAPMCKAGACQPLPTTDTMFLNV*GYLYSH Trigger: ATGGCTGTACAGGTATCCCAAAACATTGAGGAACAT...TGTGTCTGTGGTTGGGAGAGGTTGGCAAGCACCAGCTTTACACATTGGGGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR TCA 72 bp | GGCCTCACCCCGCTAGTTACAGAGAGCATCCTCAGGTaGATGGCCCCAAGACAAGCTACATTATTTCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: GLTPLVTESILR*MAPRQATLFLH Trigger: ATGTAGAAATAATGTAGCTTGTCTTGGGGCCATTCACCTGAGGATGCTCTCTGTAACTAGCGGGGTGAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR TCA 72 bp | TGGCTTGGGATGGACAGTCTGCCCGTTCCTTTGTTTTaGCACATAAGTTCCATGAAGAGGCAAGGGATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: WLGMDSLPVPLF*HISSMKRQGMP Trigger: AGGCATCCCTTGCCTCTTCATGGAACTTATGTGTCAAAACAAAGGAACGGGCAGACTGTCCATCCCAAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | ACGATGTCAGTGTCCATAGGGATCAGACTCTCTGCCTaGCTGTCAATTCAGCTGAAGGACTCTAGTCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TMSVSIGIRLSA*LSIQLKDSSQE Trigger: TTCCTGACTAGAGTCCTTCAGCTGAATTGACAGGCAGGCAGAGAGTCTGATCCCTATGGACACTGACATCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR CCA 72 bp | GAAATCCCCTTCTGTCTGATGAGTCCAGAGAAAACTTaGAAATCCCAACCCTGCAAGTCACTCAGCACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: EIPFCLMSPEKT*KSQPCKSLSTG Trigger: CCCTGTGCTGAGTGACTTGCAGGGTTGGGATTTCCAAGTTTTCTCTGGACTCATCAGACAGAAGGGGATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR CCA 72 bp | TCCTGTCCCATCAAACAACAAACCATGCCAGGTGCATaGCCGAGGAACAGTAGACACTCAACAACCAATGCA | + |
|
Preference number: 3 (lower is better) Translates to: SCPIKQQTMPGA*PRNSRHSTTNA Trigger: TGCATTGGTTGTTGAGTGTCTACTGTTCCTCGGCCATGCACCTGGCATGGTTTGTTGTTTGATGGGACAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | ACTGCAGTCCTTGGACAGAAAAGCTGCTGCCTCCCATaGCATGATTCTAGTCAGATTTACTCTGCAGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TAVLGQKSCCLP*HDSSQIYSAGF Trigger: AAAGCCTGCAGAGTAAATCTGACTAGAATCATGGCATGGGAGGCAGCAGCTTTTCTGTCCAAGGACTGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR CCA 72 bp | AACCAATGCAAAACACTCACAAGCTGCTACTCAGGATaGCAACTGGTAGCCAACAGCCACTCAACAGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: NQCKTLTSCYSG*QLVANSHSTVP Trigger: AGGAACTGTTGAGTGGCTGTTGGCTACCAGTTGCCATCCTGAGTAGCAGCTTGTGAGTGTTTTGCATTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGGCAACTGGTAGCCAACAGCCACTCAACAGTTCCTCCAAGGAAGACCACAACGTCACTGCAGGTAGATaGAGCAAGCTTTGTTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: MATGSQQPLNSSSKEDHNVTAGR*SKLCFC Trigger: ACAAAAACAAAGCTTGCTCAATCTACCTGCAGTGAC...GTTGTGGTCTTCCTTGGAGGAACTGTTGAGTGGCTGTTGGCTACCAGTTGCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR TCA 72 bp | AGTCTTAAATGTACAACACTCTTCACAGCACACAGCTaGAGTCTTTGTGGGAGAATACAGCAGTGCCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: SLKCTTLFTAHS*SLCGRIQQCPC Trigger: ACATGGGCACTGCTGTATTCTCCCACAAAGACTTCAGCTGTGTGCTGTGAAGAGTGTTGTACATTTAAGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR GCA 72 bp | AAAATAAAGCAAAAGACAACACTGCCTCAGTGTGGCTaGTTCTCTTTGACATCTTCCCTCCTAGGAAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: KIKQKTTLPQCG*FSLTSSLLGRQ Trigger: CTGTCTTCCTAGGAGGGAAGATGTCAAAGAGAAGCAGCCACACTGAGGCAGTGTTGTCTTTTGCTTTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR CCA 72 bp | GTCAGGAATGTCACACTCATAGAAAGCACACTGTCTTaGAATGTTCCTCAATGTTTTGGGATACCTGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: VRNVTLIESTLS*NVPQCFGIPVQ Trigger: CTGTACAGGTATCCCAAAACATTGAGGAACATTCCAAGACAGTGTGCTTTCTATGAGTGTGACATTCCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTAAAGAAATCCCCTTCTGTCTGATGAGTCCAGAGAAAACTTGGAAATCCCAAAGGCAGAAAGAACTTTaGTGGTTTCTTATGTACACA | + |
|
Preference number: 3 (lower is better) Translates to: SKEIPFCLMSPEKTWKSQRQKEL*WFLMYT Trigger: TGTGTACATAAGAAACCACAAAAGTTCTTTCTGCCT...TTGGGATTTCCAAGTTTTCTCTGGACTCATCAGACAGAAGGGGATTTCTTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR TCA 90 bp | TCTAAACTGCAAGCAGCAGCAGCCGAGGAAGGAAGGCCCCTAGCCTCAGGGACGGGGACAGTGACCGGGTaGGGGGCTACAGGAGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKLQAAAAEEGRPLASGTGTVTG*GATGVG Trigger: TCCAACTCCTGTAGCCCCTCACCCGGTCACTGTCCC...CGTCCCTGAGGCTAGGGGCCTTCCTTCCTCGGCTGCTGCTGCTTGCAGTTTAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR CCA 90 bp | CGAGCTGGGACCTGCTGGGCTGGGGCGCAGTCATGTTTAGCTAAGTGTCGGAGCTTGCTGGCATGCCATTaGGCTGCACCACCGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RAGTCWAGAQSCLAKCRSLLACH*AAPPWC Trigger: ACACCACGGTGGTGCAGCCCAATGGCATGCCAGCAA...GCTCCGACACTTAGCTAAACATGACTGCGCCCCAGCCCAGCAGGTCCCAGCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGTTAGTTGGAGACTAGCGAGCTGGGACCTGCTGGGCTGGGGCGCAGTCAGGGTAGACTGTTGCTaGCATGCCATTGGGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PRVSWRLASWDLLGWGAVRVDCC*HAIGLH Trigger: GTGCAGCCCAATGGCATGCCAGCAACAGTCTACCCT...GACTGCGCCCCAGCCCAGCAGGTCCCAGCTCGCTAGTCTCCAACTAACTCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CCA 90 bp | CGAGCTGGGACCTGCTGGGCTGGGGCGCAGTCATGTTTAGCTAAGTGTCGGAGCGCACATAGCTGTAGGTaGGTGTTCCTGGGGCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RAGTCWAGAQSCLAKCRSAHSCR*VFLGLG Trigger: ACCGAGCCCCAGGAACACCCACCTACAGCTATGTGC...GCTCCGACACTTAGCTAAACATGACTGCGCCCCAGCCCAGCAGGTCCCAGCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| 3UTR CAA 72 bp | CTCCAGCAAGCGTGTCTATCTCTGTGCAGGGTGTGCTaGCTGGTGCTACCCCTCTCCCCATGCACGCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LQQACLSLCRVC*LVLPLSPCTRT Trigger: TGTGCGCGTGCATGGGGAGAGGGGTAGCACCAGCAAGCACACCCTGCACAGAGATAGACACGCTTGCTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTGGTTGGAGGCACAAGGCCTGCAGCACCAGCTGTGGAACTCAATGAAGTGGGGACAGTGACCGGGTaGGGGGCTACAGGAGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLVGGTRPAAPAVELNEVGTVTG*GATGVG Trigger: TCCAACTCCTGTAGCCCCTCACCCGGTCACTGTCCC...CACTTCATTGAGTTCCACAGCTGGTGCTGCAGGCCTTGTGCCTCCAACCAGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CCA 90 bp | CGAGCTGGGACCTGCTGGGCTGGGGCGCAGTCATGTTTAGCTAAGTGTCGGAGCGTGGAACAGCTCCGCTaGTTGGGGAACAGGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: RAGTCWAGAQSCLAKCRSVEQLR*LGNRTL Trigger: AAGTGTCCTGTTCCCCAACCAGCGGAGCTGTTCCAC...GCTCCGACACTTAGCTAAACATGACTGCGCCCCAGCCCAGCAGGTCCCAGCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGTTAGTTGGAGACTAGCGAGCTGGGACCTGCTGGGCTGGGGCGCAGTCCCGTCTGGTAAGGATTaGGGGAAGAGGAGTATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRVSWRLASWDLLGWGAVPSGKD*GKRSMV Trigger: CACCATACTCCTCTTCCCCCAATCCTTACCAGACGG...GACTGCGCCCCAGCCCAGCAGGTCCCAGCTCGCTAGTCTCCAACTAACTCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGAGTTAGTTGGAGACTAGCGAGCTGGGACCTGCTGGGCTGGGGCGCAGTCACAGGAGTTGGAGAATaGGCAGTCAGCAGAGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: PRVSWRLASWDLLGWGAVTGVGE*AVSRVP Trigger: AGGTACTCTGCTGACTGCTCATTCTCCAACTCCTGT...GACTGCGCCCCAGCCCAGCAGGTCCCAGCTCGCTAGTCTCCAACTAACTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGAGGCACAAGGCCTGCAGCACCAGCTGTGGAACTCAATGAAGTGACTGCAGGTATGTGGGGACAGTaGCCGGGTGAGGGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: VGGTRPAAPAVELNEVTAGMWGQ*PGEGLQ Trigger: CTGTAGCCCCTCACCCGGTCACTGTCCCCACATACC...TGCAGTCACTTCATTGAGTTCCACAGCTGGTGCTGCAGGCCTTGTGCCTCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTTGGAGGCACAAGGCCTGCAGCACCAGCTGTGGAACTCAATGAAGTGACTGGTATGTGGGGACAGTaGCCGGGTGAGGGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LVGGTRPAAPAVELNEVTGMWGQ*PGEGLQ Trigger: CTGTAGCCCCTCACCCGGTCACTGTCCCCACATACC...AGTCACTTCATTGAGTTCCACAGCTGGTGCTGCAGGCCTTGTGCCTCCAACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR GCA 90 bp | TCTAAACTGCAAGCAGCAGCAGCCGAGGAAGGAAGGCCCCTAGCCTCAGGGACGAGGAGAATAGGCAGGTaGTGCTGCATAGCCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKLQAAAAEEGRPLASGTRRIGR*CCIAHR Trigger: CCTGTGGGCTATGCAGCAGCACCTGCCTATTCTCCT...CGTCCCTGAGGCTAGGGGCCTTCCTTCCTCGGCTGCTGCTGCTTGCAGTTTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR CCA 90 bp | TCAACAGTTCCAGGGCAAGTGTGTGAGGCTGATGTGATCAGCAGGAGGGCAGCAGCCTTGCTGGGCGTATaGACTCTGCTGGGGGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: STVPGQVCEADVISRRAAALLGV*TLLGVG Trigger: GCCTACCCCCAGCAGAGTCCATACGCCCAGCAAGGC...TGCTGCCCTCCTGCTGATCACATCAGCCTCACACACTTGCCCTGGAACTGTTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR CCA 90 bp | CGAGCTGGGACCTGCTGGGCTGGGGCGCAGTCATGTTTAGCTAAGTGTCGGAGCAGGGGCTACAGGAGTTaGAGAATGAGCAGTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RAGTCWAGAQSCLAKCRSRGYRS*RMSSQQ Trigger: CTGCTGACTGCTCATTCTCCAACTCCTGTAGCCCCT...GCTCCGACACTTAGCTAAACATGACTGCGCCCCAGCCCAGCAGGTCCCAGCTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGGACCTGCTGGGCTGGGGCGCAGTCATGTTTAGCTAAGTGTCGGAGCAGTGTAGGCACTTCTCACTaGGTACACAGCCGTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AGTCWAGAQSCLAKCRSSVGTSH*VHSRLV Trigger: TACCAGACGGCTGTGTACCCAGTGAGAAGTGCCTAC...ACTGCTCCGACACTTAGCTAAACATGACTGCGCCCCAGCCCAGCAGGTCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CCA 90 bp | GTCCTGGTTGGAGGCACAAGGCCTGCAGCACCAGCTGTGGAACTCAATGAAGTGCTGACATGGCCATCGTaGTCCCAGCAACCATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLVGGTRPAAPAVELNEVLTWPS*SQQPCP Trigger: TGGGCATGGTTGCTGGGACCACGATGGCCATGTCAG...CACTTCATTGAGTTCCACAGCTGGTGCTGCAGGCCTTGTGCCTCCAACCAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGAGGCACAAGGCCTGCAGCACCAGCTGTGGAACTCAATGAAGTGACTGCACCGTGGTGTGGTGAATaGCGTGAGGAGGTGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VGGTRPAAPAVELNEVTAPWCGE*REEVLH Trigger: ATGCAGCACCTCCTCACGTCATTCACCACACCACGG...TGCAGTCACTTCATTGAGTTCCACAGCTGGTGCTGCAGGCCTTGTGCCTCCAAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCCCCAATGTGTAAAGCTGGTGCTTGCCAACCTCTCCCAACCACAGACACACCGTGGTGTGGTGAATaGCGTGAGGAGGTGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AAPMCKAGACQPLPTTDTPWCGE*REEVLH Trigger: ATGCAGCACCTCCTCACGTCATTCACCACACCACGG...TGTGTCTGTGGTTGGGAGAGGTTGGCAAGCACCAGCTTTACACATTGGGGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGGGCGCAGTCATGTTTAGCTAAGTGTCGGAGCAGTAAGAAGAAAGTCCTGGGGACAGTGACCGGGTaGGGGGCTACAGGAGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGAQSCLAKCRSSKKKVLGTVTG*GATGVG Trigger: TCCAACTCCTGTAGCCCCTCACCCGGTCACTGTCCC...CAGGACTTTCTTCTTACTGCTCCGACACTTAGCTAAACATGACTGCGCCCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGGGCTGGGGCGCAGTCATGTTTAGCTAAGTGTCGGAGCAGTAAGAAGAAAGGTATGTGGGGACAGTaGCCGGGTGAGGGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: CWAGAQSCLAKCRSSKKKGMWGQ*PGEGLQ Trigger: CTGTAGCCCCTCACCCGGTCACTGTCCCCACATACC...TTTCTTCTTACTGCTCCGACACTTAGCTAAACATGACTGCGCCCCAGCCCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAGGGAGCTCAAGCCTCCCCCTCCCGGAGACTGACTTTCCTCTCACCGGACACACTTTGTAAGGTGTaGCAGGAGTGTAGCCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RQGAQASPSRRLTFLSPDTLCKV*QECSLF Trigger: AAACAGGCTACACTCCTGGCACACCTTACAAAGTGT...GTCCGGTGAGAGGAAAGTCAGTCTCCGGGAGGGGGAGGCTTGAGCTCCCTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047534.12 |
||
| CDS-3UTR GCA 90 bp | CCCAGAGTTAGTTGGAGACTAGCGAGCTGGGACCTGCTGGGCTGGGGCGCAGTCACACTTTGTAAGGTGTaGCAGGAGTGTAGCCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRVSWRLASWDLLGWGAVTLCKV*QECSLF Trigger: AAACAGGCTACACTCCTGGCACACCTTACAAAGTGT...GACTGCGCCCCAGCCCAGCAGGTCCCAGCTCGCTAGTCTCCAACTAACTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000170092.8 |
||
| CDS-3UTR GCA 90 bp | CATCCCTGCTGCTGCTGCTGCTGCTGTCTGGAGCTGCTGCAGGTGTGCTCTCTCAATGACGTGAGGAGGTaGTGCATACAGAGGTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HPCCCCCCCLELLQVCSLNDVRR*CIQRLC Trigger: ACACAACCTCTGTATGCAGCACCTCCTCACGTCATT...GAGAGAGCACACCTGCAGCAGCTCCAGACAGCAGCAGCAGCAGCAGCAGGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR GCA 90 bp | CTGGTTGGAGGCACAAGGCCTGCAGCACCAGCTGTGGAACTCAATGAAGTGACTAGACTGTTGCTGGCATaGCATTGGGCTGCACCACCG | + |
|
Preference number: 4 (lower is better) Translates to: LVGGTRPAAPAVELNEVTRLLLA*HWAAPP Trigger: CGGTGGTGCAGCCCAATGGCATGCCAGCAACAGTCT...AGTCACTTCATTGAGTTCCACAGCTGGTGCTGCAGGCCTTGTGCCTCCAACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR TCA 90 bp | AAGTGTCGGAGCAGTAAGAAGAAAGTCCTGGTTGGAGGCACAAGGCCTGCAGCACCGTGGTGTGGTGAATaGCGTGAGGAGGTGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KCRSSKKKVLVGGTRPAAPWCGE*REEVLH Trigger: ATGCAGCACCTCCTCACGTCATTCACCACACCACGG...TGCTGCAGGCCTTGTGCCTCCAACCAGGACTTTCTTCTTACTGCTCCGACACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTCGGAGCAGTAAGAAGAAAGTCCTGGTTGGAGGCACAAGGCCTGCAGCACAGGAGAATAGGCAGGTaGTGCTGCATAGCCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVGAVRRKSWLEAQGLQHRRIGR*CCIAHR Trigger: CCTGTGGGCTATGCAGCAGCACCTGCCTATTCTCCT...GTGCTGCAGGCCTTGTGCCTCCAACCAGGACTTTCTTCTTACTGCTCCGACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGGACCTGCTGGGCTGGGGCGCAGTCATGTTTAGCTAAGTGTCGGAGCAGTAATGACGTGAGGAGGTaGTGCATACAGAGGTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGTCWAGAQSCLAKCRSSNDVRR*CIQRLC Trigger: ACACAACCTCTGTATGCAGCACCTCCTCACGTCATT...ACTGCTCCGACACTTAGCTAAACATGACTGCGCCCCAGCCCAGCAGGTCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CCA 90 bp | TTAGCTAAGTGTCGGAGCAGTAAGAAGAAAGTCCTGGTTGGAGGCACAAGGCCTGCCTTGCTGGGCGTATaGACTCTGCTGGGGGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LAKCRSSKKKVLVGGTRPALLGV*TLLGVG Trigger: GCCTACCCCCAGCAGAGTCCATACGCCCAGCAAGGC...AGGCCTTGTGCCTCCAACCAGGACTTTCTTCTTACTGCTCCGACACTTAGCTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGTCGGAGCAGTAAGAAGAAAGTCCTGGTTGGAGGCACAAGGCCTGCAGCATTGCTGGCATGCCATTaGGCTGCACCACCGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KCRSSKKKVLVGGTRPAALLACH*AAPPWC Trigger: ACACCACGGTGGTGCAGCCCAATGGCATGCCAGCAA...TGCTGCAGGCCTTGTGCCTCCAACCAGGACTTTCTTCTTACTGCTCCGACACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CCA 90 bp | AATCCCAACCCTGCAAGTCACTCAGCACAGGGACGGGATCCCAACATGGAAGTACTGACATGGCCATCGTaGTCCCAGCAACCATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NPNPASHSAQGRDPNMEVLTWPS*SQQPCP Trigger: TGGGCATGGTTGCTGGGACCACGATGGCCATGTCAG...TACTTCCATGTTGGGATCCCGTCCCTGTGCTGAGTGACTTGCAGGGTTGGGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR CCA 90 bp | GTCCTGGTTGGAGGCACAAGGCCTGCAGCACCAGCTGTGGAACTCAATGAAGTGAGGGGCTACAGGAGTTaGAGAATGAGCAGTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLVGGTRPAAPAVELNEVRGYRS*RMSSQQ Trigger: CTGCTGACTGCTCATTCTCCAACTCCTGTAGCCCCT...CACTTCATTGAGTTCCACAGCTGGTGCTGCAGGCCTTGTGCCTCCAACCAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| 3UTR CAA 72 bp | ACACTTGCCACTGCACCCTGGGAGGTCCTGCACCACTaGGCAGTGCCAGATATACCACAAGTACAGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLATAPWEVLHH*AVPDIPQVQMP Trigger: TGGCATCTGTACTTGTGGTATATCTGGCACTGCCAAGTGGTGCAGGACCTCCCAGGGTGCAGTGGCAAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTGGTTGGAGGCACAAGGCCTGCAGCACCAGCTGTGGAACTCAATGAAGTGGACGTGAGGAGGTGCTaGATACAGAGGTTGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VLVGGTRPAAPAVELNEVDVRRC*IQRLCV Trigger: TACACACAACCTCTGTATGCAGCACCTCCTCACGTC...CACTTCATTGAGTTCCACAGCTGGTGCTGCAGGCCTTGTGCCTCCAACCAGGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGAGGCACAAGGCCTGCAGCACCAGCTGTGGAACTCAATGAAGTGACTGCACCGTCTGGTAAGGATTaGGGGAAGAGGAGTATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGGTRPAAPAVELNEVTAPSGKD*GKRSMV Trigger: CACCATACTCCTCTTCCCCCAATCCTTACCAGACGG...TGCAGTCACTTCATTGAGTTCCACAGCTGGTGCTGCAGGCCTTGTGCCTCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CCA 90 bp | GAACTGCCTGGCCCTTTCTGCTTTCCACATCTGCTTGGTACTGAGTGCCTTCAGAGGGTAGACTGTTGCTaGCATGCCATTGGGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ELPGPFCFPHLLGTECLQRVDCC*HAIGLH Trigger: GTGCAGCCCAATGGCATGCCAGCAACAGTCTACCCT...CTGAAGGCACTCAGTACCAAGCAGATGTGGAAAGCAGAAAGGGCCAGGCAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTCGGAGCAGTAAGAAGAAAGTCCTGGTTGGAGGCACAAGGCCTGCAGCACAGGGGCTACAGGAGTTaGAGAATGAGCAGTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVGAVRRKSWLEAQGLQHRGYRS*RMSSQQ Trigger: CTGCTGACTGCTCATTCTCCAACTCCTGTAGCCCCT...GTGCTGCAGGCCTTGTGCCTCCAACCAGGACTTTCTTCTTACTGCTCCGACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGCGCAGTCATGTTTAGCTAAGTGTCGGAGCAGTAAGAAGAAAGTCCTGAGACAACTGGGCGTATaGACTCTGCTGGGGGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGAQSCLAKCRSSKKKVLRQLGV*TLLGVG Trigger: GCCTACCCCCAGCAGAGTCCATACGCCCAGTTGTCT...CAGGACTTTCTTCTTACTGCTCCGACACTTAGCTAAACATGACTGCGCCCCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170092.8 |
||
| 3UTR CAA 72 bp | CTGAACTGCCTGGCCCTTTCTGCTTTCCACATCTGCTaGGTACTGAGTGCCTTCAGTGACAGCAGAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LNCLALSAFHIC*VLSAFSDSRVA Trigger: AGCCACTCTGCTGTCACTGAAGGCACTCAGTACCAAGCAGATGTGGAAAGCAGAAAGGGCCAGGCAGTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR CAA 72 bp | TTGACAGAGCCCAGAGAGGTCCTCGTGCCCTGCCCTTaGACCCACACTGAACAGAAACACTCTCACAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: LTEPREVLVPCP*THTEQKHSHRF Trigger: GAATCTGTGAGAGTGTTTCTGTTCAGTGTGGGTCAAAGGGCAGGGCACGAGGACCTCTCTGGGCTCTGTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTCGGAGCAGTAAGAAGAAAGTCCTGGTTGGAGGCACAAGGCCTGCAGCACACAGGAGTTGGAGAATaGGCAGTCAGCAGAGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: SVGAVRRKSWLEAQGLQHTGVGE*AVSRVP Trigger: AGGTACTCTGCTGACTGCTCATTCTCCAACTCCTGT...GTGCTGCAGGCCTTGTGCCTCCAACCAGGACTTTCTTCTTACTGCTCCGACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR GCA 90 bp | GTTGGAGGCACAAGGCCTGCAGCACCAGCTGTGGAACTCAATGAAGTGACTGCAGACGTGAGGAGGTGCTaGATACAGAGGTTGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VGGTRPAAPAVELNEVTADVRRC*IQRLCV Trigger: TACACACAACCTCTGTATGCAGCACCTCCTCACGTC...TGCAGTCACTTCATTGAGTTCCACAGCTGGTGCTGCAGGCCTTGTGCCTCCAAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGGCTGGGGCGCAGTCATGTTTAGCTAAGTGTCGGAGCAGTAAGAAGAAAGTGGAACAGCTCCGCTaGTTGGGGAACAGGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: CWAGAQSCLAKCRSSKKKVEQLR*LGNRTL Trigger: AAGTGTCCTGTTCCCCAACCAGCGGAGCTGTTCCAC...TTTCTTCTTACTGCTCCGACACTTAGCTAAACATGACTGCGCCCCAGCCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CCA 90 bp | GAACTGCCTGGCCCTTTCTGCTTTCCACATCTGCTTGGTACTGAGTGCCTTCAGGTAGGCACTTCTCACTaGGTACACAGCCGTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ELPGPFCFPHLLGTECLQVGTSH*VHSRLV Trigger: TACCAGACGGCTGTGTACCCAGTGAGAAGTGCCTAC...CTGAAGGCACTCAGTACCAAGCAGATGTGGAAAGCAGAAAGGGCCAGGCAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGGCTGGGGCGCAGTCATGTTTAGCTAAGTGTCGGAGCAGTAAGAAGAAAAGGGTAGACTGTTGCTaGCATGCCATTGGGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CWAGAQSCLAKCRSSKKKRVDCC*HAIGLH Trigger: GTGCAGCCCAATGGCATGCCAGCAACAGTCTACCCT...TTTCTTCTTACTGCTCCGACACTTAGCTAAACATGACTGCGCCCCAGCCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CCA 90 bp | TTAGCTAAGTGTCGGAGCAGTAAGAAGAAAGTCCTGGTTGGAGGCACAAGGCCTGCACATAGCTGTAGGTaGGTGTTCCTGGGGCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAKCRSSKKKVLVGGTRPAHSCR*VFLGLG Trigger: ACCGAGCCCCAGGAACACCCACCTACAGCTATGTGC...AGGCCTTGTGCCTCCAACCAGGACTTTCTTCTTACTGCTCCGACACTTAGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCCCCAATGTGTAAAGCTGGTGCTTGCCAACCTCTCCCAACCACAGACACAACATGTGCAAGACCCTaGGTTCAATCTCCAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: AAPMCKAGACQPLPTTDTTCARP*VQSPAL Trigger: CAGTGCTGGAGATTGAACCCAGGGTCTTGCACATGT...TGTGTCTGTGGTTGGGAGAGGTTGGCAAGCACCAGCTTTACACATTGGGGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167518.8 |
||
| CDS-3UTR GCA 90 bp | AAGTGTCGGAGCAGTAAGAAGAAAGTCCTGGTTGGAGGCACAAGGCCTGCAGCAAGAATAGGCAGGTGCTaGTGCATAGCCCACAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KCRSSKKKVLVGGTRPAARIGRC*CIAHRK Trigger: TTTCCTGTGGGCTATGCAGCAGCACCTGCCTATTCT...TGCTGCAGGCCTTGTGCCTCCAACCAGGACTTTCTTCTTACTGCTCCGACACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR GCA 90 bp | GTTCCTCCAAGGAAGACCACAACACAGAGACAACAGTTGCAGAGGCCGCTTCCAGACGTGAGGAGGTGCTaGATACAGAGGTTGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VPPRKTTTQRQQLQRPLPDVRRC*IQRLCV Trigger: TACACACAACCTCTGTATGCAGCACCTCCTCACGTC...TGGAAGCGGCCTCTGCAACTGTTGTCTCTGTGTTGTGGTCTTCCTTGGAGGAAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR CCA 90 bp | AGTGACCGGGTGAGGGGCTACAGGAGTTGGAGAATGAGCAGTCAGCAGAGTACCCACAGGAAAACCAGCTaGATATCCAATTCCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SDRVRGYRSWRMSSQQSTHRKTS*ISNSFG Trigger: GCCAAAGGAATTGGATATCCAGCTGGTTTTCCTGTG...GGTACTCTGCTGACTGCTCATTCTCCAACTCCTGTAGCCCCTCACCCGGTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| CDS-3UTR CCA 90 bp | GCTTACAGTTTCCAATACTCCACAACTCTAAACTGCAAGCAGCAGCAGCCGAGGGTGGAACAGCTCCGCTaGTTGGGGAACAGGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: AYSFQYSTTLNCKQQQPRVEQLR*LGNRTL Trigger: AAGTGTCCTGTTCCCCAACCAGCGGAGCTGTTCCAC...CCTCGGCTGCTGCTGCTTGCAGTTTAGAGTTGTGGAGTATTGGAAACTGTAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGCGCAGTCATGTTTAGCTAAGTGTCGGAGCAGTAAGAAGAAAGTCCTGCCGTCTGGTAAGGATTaGGGGAAGAGGAGTATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGAQSCLAKCRSSKKKVLPSGKD*GKRSMV Trigger: CACCATACTCCTCTTCCCCCAATCCTTACCAGACGG...CAGGACTTTCTTCTTACTGCTCCGACACTTAGCTAAACATGACTGCGCCCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR GCA 90 bp | GAACTGCCTGGCCCTTTCTGCTTTCCACATCTGCTTGGTACTGAGTGCCTTCAGAATGACGTGAGGAGGTaGTGCATACAGAGGTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ELPGPFCFPHLLGTECLQNDVRR*CIQRLC Trigger: ACACAACCTCTGTATGCAGCACCTCCTCACGTCATT...CTGAAGGCACTCAGTACCAAGCAGATGTGGAAAGCAGAAAGGGCCAGGCAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR GCA 90 bp | AAGTGTCGGAGCAGTAAGAAGAAAGTCCTGGTTGGAGGCACAAGGCCTGCAGCAGTTGTGTGTAGTACGTaGCTTGCTGTGGGGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: KCRSSKKKVLVGGTRPAAVVCST*LAVGKT Trigger: TGTTTTCCCCACAGCAAGGCACGTACTACACACAAC...TGCTGCAGGCCTTGTGCCTCCAACCAGGACTTTCTTCTTACTGCTCCGACACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170092.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTCGGAGCAGTAAGAAGAAAGTCCTGGTTGGAGGCACAAGGCCTGCAGCACCACAGGAAAACCAGCTaGATATCCAATTCCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVGAVRRKSWLEAQGLQHHRKTS*ISNSFG Trigger: GCCAAAGGAATTGGATATCCAGCTGGTTTTCCTGTG...GTGCTGCAGGCCTTGTGCCTCCAACCAGGACTTTCTTCTTACTGCTCCGACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGGCTGGGGCGCAGTCATGTTTAGCTAAGTGTCGGAGCAGTAAGAAGAAAAACAGCTCCGCTGGTTaGGGAACAGGACACTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CWAGAQSCLAKCRSSKKKNSSAG*GTGHFV Trigger: TACAAAGTGTCCTGTTCCCCAACCAGCGGAGCTGTT...TTTCTTCTTACTGCTCCGACACTTAGCTAAACATGACTGCGCCCCAGCCCAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CCA 90 bp | TTAGCTAAGTGTCGGAGCAGTAAGAAGAAAGTCCTGGTTGGAGGCACAAGGCCTGTAGGCACTTCTCACTaGGTACACAGCCGTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LAKCRSSKKKVLVGGTRPVGTSH*VHSRLV Trigger: TACCAGACGGCTGTGTACCCAGTGAGAAGTGCCTAC...AGGCCTTGTGCCTCCAACCAGGACTTTCTTCTTACTGCTCCGACACTTAGCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| 3UTR CAA 72 bp | AGGTTCCATATTCAGGTGACCCAGCCTCTAGCCAAGTaGACTGCTACTGAGGCAACCTCTACACCAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: RFHIQVTQPLAK*TATEATSTPTW Trigger: CCATGTTGGTGTAGAGGTTGCCTCAGTAGCAGTCAACTTGGCTAGAGGCTGGGTCACCTGAATATGGAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR CAA 72 bp | CTGGCTTGGGATGGACAGTCTGCCCGTTCCTTTGTTTaGACACATAAGTTCCATGAAGAGGCAAGGGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LAWDGQSARSFV*THKFHEEARDA Trigger: GGCATCCCTTGCCTCTTCATGGAACTTATGTGTCAAAACAAAGGAACGGGCAGACTGTCCATCCCAAGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR GCA 90 bp | GTTGGAGGCACAAGGCCTGCAGCACCAGCTGTGGAACTCAATGAAGTGACTGCAAATTCCTTTGGCATTTaGATAGGGAACGCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VGGTRPAAPAVELNEVTANSFGI*IGNARR Trigger: TCTTCTGGCGTTCCCTATGCAAATGCCAAAGGAATT...TGCAGTCACTTCATTGAGTTCCACAGCTGGTGCTGCAGGCCTTGTGCCTCCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTCGGAGCAGTAAGAAGAAAGTCCTGGTTGGAGGCACAAGGCCTGCAGCACAATTCCTTTGGCATTTaGATAGGGAACGCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVGAVRRKSWLEAQGLQHNSFGI*IGNARR Trigger: TCTTCTGGCGTTCCCTATGCAAATGCCAAAGGAATT...GTGCTGCAGGCCTTGTGCCTCCAACCAGGACTTTCTTCTTACTGCTCCGACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAGCACACTGTCTTGGAATGTTCCTCAATGTTTTGGGATACCTGTACAGCCAGACTGTTGCTGGCATaGCATTGGGCTGCACCACCG | + |
|
Preference number: 4 (lower is better) Translates to: RKHTVLECSSMFWDTCTARLLLA*HWAAPP Trigger: CGGTGGTGCAGCCCAATGGCATGCCAGCAACAGTCT...GGCTGTACAGGTATCCCAAAACATTGAGGAACATTCCAAGACAGTGTGCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR CCA 90 bp | GCACTCCTGAACTGCCTGGCCCTTTCTGCTTTCCACATCTGCTTGGTACTGAGTCACAGGAAAACCAGCTaGATATCCAATTCCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALLNCLALSAFHICLVLSHRKTS*ISNSFG Trigger: GCCAAAGGAATTGGATATCCAGCTGGTTTTCCTGTG...ACTCAGTACCAAGCAGATGTGGAAAGCAGAAAGGGCCAGGCAGTTCAGGAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR CCA 90 bp | GACTGCACAGCTCCATCCTCAAATATTAATTTGCAGGGCAATCACCACTGTGGGCCGTCTGGTAAGGATTaGGGGAAGAGGAGTATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DCTAPSSNINLQGNHHCGPSGKD*GKRSMV Trigger: CACCATACTCCTCTTCCCCCAATCCTTACCAGACGG...CCCACAGTGGTGATTGCCCTGCAAATTAATATTTGAGGATGGAGCTGTGCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| CDS-3UTR CCA 90 bp | AGTGATGACCTGATAGCTTCAAAACAGACAAGATTTCCACCCAGCCGAGTTGTAGCACATAGCTGTAGGTaGGTGTTCCTGGGGCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDDLIASKQTRFPPSRVVAHSCR*VFLGLG Trigger: ACCGAGCCCCAGGAACACCCACCTACAGCTATGTGC...TACAACTCGGCTGGGTGGAAATCTTGTCTGTTTTGAAGCTATCAGGTCATCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR CCA 90 bp | TTAGCTAAGTGTCGGAGCAGTAAGAAGAAAGTCCTGGTTGGAGGCACAAGGCCTGTACGTGCCTTGCTGTaGGGAAAACAGAGACAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LAKCRSSKKKVLVGGTRPVRALL*GKQRQL Trigger: CAGTTGTCTCTGTTTTCCCCACAGCAAGGCACGTAC...AGGCCTTGTGCCTCCAACCAGGACTTTCTTCTTACTGCTCCGACACTTAGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170092.8 |
||
| 3UTR CAA 72 bp | AGGACAGGCTGTGAACGTGGTCCAGTCCTTCGGGTTTaGCATATGATGGTTTTGCATCAGTCACTGCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RTGCERGPVLRV*HMMVLHQSLQV Trigger: TACCTGCAGTGACTGATGCAAAACCATCATATGCAAAACCCGAAGGACTGGACCACGTTCACAGCCTGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCTGGGGCGCAGTCATGTTTAGCTAAGTGTCGGAGCAGTAAGAAGAAAGTCCACAGGAAAACCAGCTaGATATCCAATTCCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WAGAQSCLAKCRSSKKKVHRKTS*ISNSFG Trigger: GCCAAAGGAATTGGATATCCAGCTGGTTTTCCTGTG...GACTTTCTTCTTACTGCTCCGACACTTAGCTAAACATGACTGCGCCCCAGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CCA 90 bp | GAACTCAATGAAGTGACTGCACAGCTCCATCCTCAAATATTAATTTGCAGGGCATTGCTGGCATGCCATTaGGCTGCACCACCGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ELNEVTAQLHPQILICRALLACH*AAPPWC Trigger: ACACCACGGTGGTGCAGCCCAATGGCATGCCAGCAA...TGCCCTGCAAATTAATATTTGAGGATGGAGCTGTGCAGTCACTTCATTGAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CCA 90 bp | GTGGAACTCAATGAAGTGACTGCACAGCTCCATCCTCAAATATTAATTTGCAGGCTGACATGGCCATCGTaGTCCCAGCAACCATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VELNEVTAQLHPQILICRLTWPS*SQQPCP Trigger: TGGGCATGGTTGCTGGGACCACGATGGCCATGTCAG...CCTGCAAATTAATATTTGAGGATGGAGCTGTGCAGTCACTTCATTGAGTTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| 3UTR CAA 72 bp | AGAAATCCCCTTCTGTCTGATGAGTCCAGAGAAAACTaGGAAATCCCAACCCTGCAAGTCACTCAGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RNPLLSDESREN*EIPTLQVTQHR Trigger: CCTGTGCTGAGTGACTTGCAGGGTTGGGATTTCCAAGTTTTCTCTGGACTCATCAGACAGAAGGGGATTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR CAA 72 bp | ATTTCCACCCAGCCGAGTTGTACACTACAGAGGTGTTaGGTAGTCACTCCATTTCAACAGTTCCAGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISTQPSCTLQRC*VVTPFQQFQGK Trigger: CTTGCCCTGGAACTGTTGAAATGGAGTGACTACCAAACACCTCTGTAGTGTACAACTCGGCTGGGTGGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR CAA 72 bp | TGTAGCCTAACTGACCCAATCCTGATGGTGGTGGGTTaGCTTCTCCAGAGTCAAGGAGCTTACAGTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CSLTDPILMVVG*LLQSQGAYSFQ Trigger: TTGGAAACTGTAAGCTCCTTGACTCTGGAGAAGCAAACCCACCACCATCAGGATTGGGTCAGTTAGGCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR GCA 90 bp | GTGGAACTCAATGAAGTGACTGCACAGCTCCATCCTCAAATATTAATTTGCAGGAGGAGAATAGGCAGGTaGTGCTGCATAGCCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VELNEVTAQLHPQILICRRRIGR*CCIAHR Trigger: CCTGTGGGCTATGCAGCAGCACCTGCCTATTCTCCT...CCTGCAAATTAATATTTGAGGATGGAGCTGTGCAGTCACTTCATTGAGTTCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 ENSMUST00000185469.7 |
||
| CDS-3UTR GCA 90 bp | ATAGAAAGCACACTGTCTTGGAATGTTCCTCAATGTTTTGGGATACCTGTACAGAGACTGTTGCTGGCATaGCATTGGGCTGCACCACCG | + |
|
Preference number: 4 (lower is better) Translates to: IESTLSWNVPQCFGIPVQRLLLA*HWAAPP Trigger: CGGTGGTGCAGCCCAATGGCATGCCAGCAACAGTCT...CTGTACAGGTATCCCAAAACATTGAGGAACATTCCAAGACAGTGTGCTTTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR CCA 90 bp | AGTGATGACCTGATAGCTTCAAAACAGACAAGATTTCCACCCAGCCGAGTTGTAATCTCCAGCACTGTTTaGAAGGTAGGATTCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SDDLIASKQTRFPPSRVVISSTV*KVGFAP Trigger: TGGAGCGAATCCTACCTTCCAAACAGTGCTGGAGAT...TACAACTCGGCTGGGTGGAAATCTTGTCTGTTTTGAAGCTATCAGGTCATCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167518.8 |
||
| CDS-3UTR CCA 90 bp | GTGGAACTCAATGAAGTGACTGCACAGCTCCATCCTCAAATATTAATTTGCAGGAACAGCTCCGCTGTTTaGAAGGTAGGATTCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VELNEVTAQLHPQILICRNSSAV*KVGFAP Trigger: TGGAGCGAATCCTACCTTCCAAACAGCGGAGCTGTT...CCTGCAAATTAATATTTGAGGATGGAGCTGTGCAGTCACTTCATTGAGTTCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| 3UTR CAA 72 bp | ATGTACAACACTCTTCACAGCACACAGCTGAAGTCTTaGTGGGAGAATACAGCAGTGCCCATGTCTTTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MYNTLHSTQLKS*WENTAVPMSLG Trigger: ACCTAAAGACATGGGCACTGCTGTATTCTCCCACAAAGACTTCAGCTGTGTGCTGTGAAGAGTGTTGTACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR GCA 90 bp | GTGACTGCACAGCTCCATCCTCAAATATTAATTTGCAGGGCAATCACCACTGTGAATTCCTTTGGCATTTaGATAGGGAACGCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VTAQLHPQILICRAITTVNSFGI*IGNARR Trigger: TCTTCTGGCGTTCCCTATGCAAATGCCAAAGGAATT...CACAGTGGTGATTGCCCTGCAAATTAATATTTGAGGATGGAGCTGTGCAGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| CDS-3UTR GCA 90 bp | GTGGAACTCAATGAAGTGACTGCACAGCTCCATCCTCAAATATTAATTTGCAGGAATTCCTTTGGCATTTaGATAGGGAACGCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VELNEVTAQLHPQILICRNSFGI*IGNARR Trigger: TCTTCTGGCGTTCCCTATGCAAATGCCAAAGGAATT...CCTGCAAATTAATATTTGAGGATGGAGCTGTGCAGTCACTTCATTGAGTTCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 ENSMUST00000185469.7 |
||
| 3UTR CAA 72 bp | AGATTCAAGTCGGGCACACTCAGGCAGAAAGAACTTTaGTGGTTTCTTATGTACACACTCAAAATCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RFKSGTLRQKEL*WFLMYTLKIFP Trigger: GGGAAAGATTTTGAGTGTGTACATAAGAAACCACAAAAGTTCTTTCTGCCTGAGTGTGCCCGACTTGAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| 3UTR CAA 72 bp | AGTCAGGAATGTCACACTCATAGAAAGCACACTGTCTaGGAATGTTCCTCAATGTTTTGGGATACCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SQECHTHRKHTV*ECSSMFWDTCT Trigger: TGTACAGGTATCCCAAAACATTGAGGAACATTCCAAGACAGTGTGCTTTCTATGAGTGTGACATTCCTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR CAA 90 bp | GTCCTGGTTGGAGGCACAAGGCCTGCAGCACCAGCTGTGGAACTCAATGAAGTGGTTGCTGGCATGCCATaGGGCTGCACCACCGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VLVGGTRPAAPAVELNEVVAGMP*GCTTVV Trigger: CACCACGGTGGTGCAGCCCAATGGCATGCCAGCAAC...CACTTCATTGAGTTCCACAGCTGGTGCTGCAGGCCTTGTGCCTCCAACCAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CAA 90 bp | CAACCCAGAGTTAGTTGGAGACTAGCGAGCTGGGACCTGCTGGGCTGGGGCGCATGCTGCATACAGAGGTaGTGTGTAGTACGTGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QPRVSWRLASWDLLGWGACCIQR*CVVRAL Trigger: CAAGGCACGTACTACACACAACCTCTGTATGCAGCA...TGCGCCCCAGCCCAGCAGGTCCCAGCTCGCTAGTCTCCAACTAACTCTGGGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CAA 90 bp | GCACTCCTGAACTGCCTGGCCCTTTCTGCTTTCCACATCTGCTTGGTACTGAGTGTTGCTGGCATGCCATaGGGCTGCACCACCGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ALLNCLALSAFHICLVLSVAGMP*GCTTVV Trigger: CACCACGGTGGTGCAGCCCAATGGCATGCCAGCAAC...ACTCAGTACCAAGCAGATGTGGAAAGCAGAAAGGGCCAGGCAGTTCAGGAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS CCA 90 bp | CACTGGGTACACAGCCGTCTGGTAAGGATTGGGGGAAGAGGAGTATaGTGGAACAGCTCCGCTGTTTGGAAGGTAGGATTCGCTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HWVHSRLVRIGGRGV*WNSSAVWKVGFAPG Trigger: CCCTGGAGCGAATCCTACCTTCCAAACAGCGGAGCTGTTCCACCATACTCCTCTTCCCCCAATCCTTACCAGACGGCTGTGTACCCAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| CDS-3UTR CAA 90 bp | GCTGGGACCTGCTGGGCTGGGGCGCAGTCATGTTTAGCTAAGTGTCGGAGCAGTTGCTGCATACAGAGGTaGTGTGTAGTACGTGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AGTCWAGAQSCLAKCRSSCCIQR*CVVRAL Trigger: CAAGGCACGTACTACACACAACCTCTGTATGCAGCA...ACTGCTCCGACACTTAGCTAAACATGACTGCGCCCCAGCCCAGCAGGTCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CAA 90 bp | TCTAAACTGCAAGCAGCAGCAGCCGAGGAAGGAAGGCCCCTAGCCTCAGGGACGAATCTCCAGCACTGTTaGGAAGGTAGGATTCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SKLQAAAAEEGRPLASGTNLQHC*EGRIRS Trigger: GGAGCGAATCCTACCTTCCAAACAGTGCTGGAGATT...CGTCCCTGAGGCTAGGGGCCTTCCTTCCTCGGCTGCTGCTGCTTGCAGTTTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167518.8 |
||
| CDS CCA 90 bp | CACTGGGTACACAGCCGTCTGGTAAGGATTGGGGGAAGAGGAGTATaGTGGAACAGCTCCGCTGGTTGGGGAACAGGACACTTTGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: HWVHSRLVRIGGRGV*WNSSAGWGTGHFVR Trigger: CCTTACAAAGTGTCCTGTTCCCCAACCAGCGGAGCTGTTCCACCATACTCCTCTTCCCCCAATCCTTACCAGACGGCTGTGTACCCAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 ENSMUST00000191307.7 |
||
| CDS CCA 90 bp | TGGGTACACAGCCGTCTGGTAAGGATTGGGGGAAGAGGAGTATGGTaGAACAGCTCCGCTGTTTGGAAGGTAGGATTCGCTCCAGGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: WVHSRLVRIGGRGVW*NSSAVWKVGFAPGY Trigger: GTACCCTGGAGCGAATCCTACCTTCCAAACAGCGGAGCTGTTCCACCATACTCCTCTTCCCCCAATCCTTACCAGACGGCTGTGTACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| CDS-3UTR CAA 90 bp | GTTGGAGGCACAAGGCCTGCAGCACCAGCTGTGGAACTCAATGAAGTGACTGCAGAACAGCTCCGCTGGTaGGGGAACAGGACACTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VGGTRPAAPAVELNEVTAEQLRW*GNRTLC Trigger: ACAAAGTGTCCTGTTCCCCAACCAGCGGAGCTGTTC...TGCAGTCACTTCATTGAGTTCCACAGCTGGTGCTGCAGGCCTTGTGCCTCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CAA 90 bp | GCTTACAGTTTCCAATACTCCACAACTCTAAACTGCAAGCAGCAGCAGCCGAGGGTTGCTGGCATGCCATaGGGCTGCACCACCGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AYSFQYSTTLNCKQQQPRVAGMP*GCTTVV Trigger: CACCACGGTGGTGCAGCCCAATGGCATGCCAGCAAC...CCTCGGCTGCTGCTGCTTGCAGTTTAGAGTTGTGGAGTATTGGAAACTGTAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS CCA 90 bp | GTAAGGATTGGGGGAAGAGGAGTATGGTGGAACAGCTCCGCTGGTTaGGGAACAGGACACTTTGTAAGGTGTGCCAGGAGTGTAGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VRIGGRGVWWNSSAG*GTGHFVRCARSVAC Trigger: ACAGGCTACACTCCTGGCACACCTTACAAAGTGTCCTGTTCCCCAACCAGCGGAGCTGTTCCACCATACTCCTCTTCCCCCAATCCTTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000170092.8 |
||
| CDS CCA 90 bp | TGGGTACACAGCCGTCTGGTAAGGATTGGGGGAAGAGGAGTATGGTaGAACAGCTCCGCTGGTTGGGGAACAGGACACTTTGTAAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: WVHSRLVRIGGRGVW*NSSAGWGTGHFVRC Trigger: ACACCTTACAAAGTGTCCTGTTCCCCAACCAGCGGAGCTGTTCCACCATACTCCTCTTCCCCCAATCCTTACCAGACGGCTGTGTACCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 ENSMUST00000191307.7 |
||
| CDS-3UTR CAA 90 bp | GTTGGAGGCACAAGGCCTGCAGCACCAGCTGTGGAACTCAATGAAGTGACTGCAAGGAGTGTAGCCTGTTaGGAAGGTAGGATTCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VGGTRPAAPAVELNEVTARSVAC*EGRIRS Trigger: GGAGCGAATCCTACCTTCCAAACAGGCTACACTCCT...TGCAGTCACTTCATTGAGTTCCACAGCTGGTGCTGCAGGCCTTGTGCCTCCAAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000170092.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCTCCAAGGAAGACCACAACACAGAGACAACAGTTGCAGAGGCCGCTTCCAGAACAGCTCCGCTGGTaGGGGAACAGGACACTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VPPRKTTTQRQQLQRPLPEQLRW*GNRTLC Trigger: ACAAAGTGTCCTGTTCCCCAACCAGCGGAGCTGTTC...TGGAAGCGGCCTCTGCAACTGTTGTCTCTGTGTTGTGGTCTTCCTTGGAGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS GCA 90 bp | GTGGAACAGCTCCGCTGGTTGGGGAACAGGACACTTTGTAAGGTGTaGCAGGAGTGTAGCCTAACATGTGCAAGACCCTGGGTTCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: VEQLRWLGNRTLCKV*QECSLTCARPWVQS Trigger: AGATTGAACCCAGGGTCTTGCACATGTTAGGCTACACTCCTGGCACACCTTACAAAGTGTCCTGTTCCCCAACCAGCGGAGCTGTTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167518.8 ENSMUST00000191307.7 |
||
| CDS-3UTR CAA 90 bp | GTTGGAGGCACAAGGCCTGCAGCACCAGCTGTGGAACTCAATGAAGTGACTGCATGCTGCATACAGAGGTaGTGTGTAGTACGTGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VGGTRPAAPAVELNEVTACCIQR*CVVRAL Trigger: CAAGGCACGTACTACACACAACCTCTGTATGCAGCA...TGCAGTCACTTCATTGAGTTCCACAGCTGGTGCTGCAGGCCTTGTGCCTCCAAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 |
||
| CDS-3UTR CAA 90 bp | TCAACAGTTCCAGGGCAAGTGTGTGAGGCTGATGTGATCAGCAGGAGGGCAGCACAATTCCTTTGGCATTaGCATAGGGAACGCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: STVPGQVCEADVISRRAAQFLWH*HRERQK Trigger: CTTCTGGCGTTCCCTATGCAAATGCCAAAGGAATTG...TGCTGCCCTCCTGCTGATCACATCAGCCTCACACACTTGCCCTGGAACTGTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCTGCCTGCCTGTCAATTCAGCTGAAGGACTCTAGTCAGGAATGTCACACTGAACAGCTCCGCTGGTaGGGGAACAGGACACTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSACLSIQLKDSSQECHTEQLRW*GNRTLC Trigger: ACAAAGTGTCCTGTTCCCCAACCAGCGGAGCTGTTC...AGTGTGACATTCCTGACTAGAGTCCTTCAGCTGAATTGACAGGCAGGCAGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS GCA 90 bp | GAAGGTAGGATTCGCTCCAGGGTACATGTTAGGAGAATAGGCAGGTaGTGCTGCATAGCCCACAGGAAAACCAGCTGGATATCCAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGRIRSRVHVRRIGR*CCIAHRKTSWISNS Trigger: GGAATTGGATATCCAGCTGGTTTTCCTGTGGGCTATGCAGCAGCACCTGCCTATTCTCCTAACATGTACCCTGGAGCGAATCCTACCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 ENSMUST00000185231.2 ENSMUST00000185469.7 ENSMUST00000191307.7 |
||
| CDS-3UTR CAA 90 bp | TGGGCTGGGGCGCAGTCATGTTTAGCTAAGTGTCGGAGCAGTAAGAAGAAAGTCTGTGTAGTACGTGCCTaGCTGTGGGGAAAACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: WAGAQSCLAKCRSSKKKVCVVRA*LWGKQR Trigger: TCTCTGTTTTCCCCACAGCAAGGCACGTACTACACA...GACTTTCTTCTTACTGCTCCGACACTTAGCTAAACATGACTGCGCCCCAGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170092.8 |
||
| CDS-3UTR CAA 90 bp | GACTGCACAGCTCCATCCTCAAATATTAATTTGCAGGGCAATCACCACTGTGGGGAACAGCTCCGCTGTTaGGAAGGTAGGATTCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DCTAPSSNINLQGNHHCGEQLRC*EGRIRS Trigger: GGAGCGAATCCTACCTTCCAAACAGCGGAGCTGTTC...CCCACAGTGGTGATTGCCCTGCAAATTAATATTTGAGGATGGAGCTGTGCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| CDS GCA 90 bp | GGTAGGATTCGCTCCAGGGTACATGTTAGGAGAATAGGCAGGTGCTaGTGCATAGCCCACAGGAAAACCAGCTGGATATCCAATTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GRIRSRVHVRRIGRC*CIAHRKTSWISNSF Trigger: AAAGGAATTGGATATCCAGCTGGTTTTCCTGTGGGCTATGCAGCAGCACCTGCCTATTCTCCTAACATGTACCCTGGAGCGAATCCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 ENSMUST00000185231.2 ENSMUST00000185469.7 ENSMUST00000191307.7 |
||
| CDS-3UTR CAA 90 bp | AGTCGGGCACACTCAGGCAGAAAGAACTTTTGTGGTTTCTTATGTACACACTCAAGGAGTGTAGCCTGTTaGGAAGGTAGGATTCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRAHSGRKNFCGFLCTHSRSVAC*EGRIRS Trigger: GGAGCGAATCCTACCTTCCAAACAGGCTACACTCCT...TGAGTGTGTACATAAGAAACCACAAAAGTTCTTTCTGCCTGAGTGTGCCCGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047534.12 |
||
| CDS-3UTR CAA 90 bp | GAACTCAATGAAGTGACTGCACAGCTCCATCCTCAAATATTAATTTGCAGGGCACAATTCCTTTGGCATTaGCATAGGGAACGCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ELNEVTAQLHPQILICRAQFLWH*HRERQK Trigger: CTTCTGGCGTTCCCTATGCAAATGCCAAAGGAATTG...TGCCCTGCAAATTAATATTTGAGGATGGAGCTGTGCAGTCACTTCATTGAGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 ENSMUST00000185469.7 |
||
| CDS-3UTR CAA 90 bp | TTAAATGTACAACACTCTTCACAGCACACAGCTGAAGTCTTTGTGGGAGAATACCAATTCCTTTGGCATTaGCATAGGGAACGCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LNVQHSSQHTAEVFVGEYQFLWH*HRERQK Trigger: CTTCTGGCGTTCCCTATGCAAATGCCAAAGGAATTG...GTATTCTCCCACAAAGACTTCAGCTGTGTGCTGTGAAGAGTGTTGTACATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 |
||
| CDS CCA 72 bp | GGGGGAAGAGGAGTATGGTGGAACAGCTCCGCTGGTTaGGGAACAGGACACTTTGTAAGGTGTGCCAGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GGRGVWWNSSAG*GTGHFVRCARS Trigger: ACTCCTGGCACACCTTACAAAGTGTCCTGTTCCCCAACCAGCGGAGCTGTTCCACCATACTCCTCTTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 ENSMUST00000191307.7 |
||
| CDS CCA 72 bp | CACTTCTCACTGGGTACACAGCCGTCTGGTAAGGATTaGGGGAAGAGGAGTATGGTGGAACAGCTCCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: HFSLGTQPSGKD*GKRSMVEQLRW Trigger: CCAGCGGAGCTGTTCCACCATACTCCTCTTCCCCCAATCCTTACCAGACGGCTGTGTACCCAGTGAGAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 ENSMUST00000191307.7 |
||
| CDS CAA 72 bp | TGGGGGAAGAGGAGTATGGTGGAACAGCTCCGCTGGTaGGGGAACAGGACACTTTGTAAGGTGTGCCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: WGKRSMVEQLRW*GNRTLCKVCQE Trigger: CTCCTGGCACACCTTACAAAGTGTCCTGTTCCCCAACCAGCGGAGCTGTTCCACCATACTCCTCTTCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 ENSMUST00000191307.7 |
||
| CDS GCA 72 bp | CTCCGCTGGTTGGGGAACAGGACACTTTGTAAGGTGTaGCAGGAGTGTAGCCTAACATGTGCAAGACCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LRWLGNRTLCKV*QECSLTCARPW Trigger: CCAGGGTCTTGCACATGTTAGGCTACACTCCTGGCACACCTTACAAAGTGTCCTGTTCCCCAACCAGCGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167518.8 ENSMUST00000191307.7 |
||
| CDS CCA 72 bp | GATTGGGGGAAGAGGAGTATGGTGGAACAGCTCCGCTaGTTGGGGAACAGGACACTTTGTAAGGTGTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DWGKRSMVEQLR*LGNRTLCKVCQ Trigger: CTGGCACACCTTACAAAGTGTCCTGTTCCCCAACCAGCGGAGCTGTTCCACCATACTCCTCTTCCCCCAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 ENSMUST00000191307.7 |
||
| CDS GCA 72 bp | CGCTCCAGGGTACATGTTAGGAGAATAGGCAGGTGCTaGTGCATAGCCCACAGGAAAACCAGCTGGATATCC | + |
|
Preference number: 6 (lower is better) Translates to: RSRVHVRRIGRC*CIAHRKTSWIS Trigger: GGATATCCAGCTGGTTTTCCTGTGGGCTATGCAGCAGCACCTGCCTATTCTCCTAACATGTACCCTGGAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 ENSMUST00000185231.2 ENSMUST00000185469.7 ENSMUST00000191307.7 |
||
| CDS CCA 72 bp | GGGGGAAGAGGAGTATGGTGGAACAGCTCCGCTGTTTaGAAGGTAGGATTCGCTCCAGGGTACATGTTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GGRGVWWNSSAV*KVGFAPGYMLG Trigger: TCCTAACATGTACCCTGGAGCGAATCCTACCTTCCAAACAGCGGAGCTGTTCCACCATACTCCTCTTCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| CDS CCA 72 bp | CACAGCCGTCTGGTAAGGATTGGGGGAAGAGGAGTATaGTGGAACAGCTCCGCTGTTTGGAAGGTAGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: HSRLVRIGGRGV*WNSSAVWKVGF Trigger: GAATCCTACCTTCCAAACAGCGGAGCTGTTCCACCATACTCCTCTTCCCCCAATCCTTACCAGACGGCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| CDS CAA 72 bp | TGGGGGAAGAGGAGTATGGTGGAACAGCTCCGCTGTTaGGAAGGTAGGATTCGCTCCAGGGTACATGTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: WGKRSMVEQLRC*EGRIRSRVHVR Trigger: CCTAACATGTACCCTGGAGCGAATCCTACCTTCCAAACAGCGGAGCTGTTCCACCATACTCCTCTTCCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185469.7 |
||
| CDS GCA 72 bp | ATTCGCTCCAGGGTACATGTTAGGAGAATAGGCAGGTaGTGCTGCATAGCCCACAGGAAAACCAGCTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: IRSRVHVRRIGR*CCIAHRKTSWI Trigger: TATCCAGCTGGTTTTCCTGTGGGCTATGCAGCAGCACCTGCCTATTCTCCTAACATGTACCCTGGAGCGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 ENSMUST00000185231.2 ENSMUST00000185469.7 ENSMUST00000191307.7 |
||
| CDS CAA 72 bp | CATGTGCAAGACCCTGGGTTCAATCTCCAGCACTGTTaGGAAGGTAGGATTCGCTCCAGGGTACATGTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: HVQDPGFNLQHC*EGRIRSRVHVR Trigger: CCTAACATGTACCCTGGAGCGAATCCTACCTTCCAAACAGTGCTGGAGATTGAACCCAGGGTCTTGCACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167518.8 ENSMUST00000191307.7 |
||
| CDS CCA 72 bp | ATGTGCAAGACCCTGGGTTCAATCTCCAGCACTGTTTaGAAGGTAGGATTCGCTCCAGGGTACATGTTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: MCKTLGSISSTV*KVGFAPGYMLG Trigger: TCCTAACATGTACCCTGGAGCGAATCCTACCTTCCAAACAGTGCTGGAGATTGAACCCAGGGTCTTGCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167518.8 ENSMUST00000191307.7 |
||
| CDS CAA 90 bp | CATAGCCCACAGGAAAACCAGCTGGATATCCAATTCCTTTGGCATTaGCATAGGGAACGCCAGAAGACCCAGGGCTATAAACAGGATTCA | + |
|
Preference number: 6 (lower is better) Translates to: HSPQENQLDIQFLWH*HRERQKTQGYKQDS Trigger: TGAATCCTGTTTATAGCCCTGGGTCTTCTGGCGTTCCCTATGCAAATGCCAAAGGAATTGGATATCCAGCTGGTTTTCCTGTGGGCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 ENSMUST00000185231.2 ENSMUST00000185469.7 ENSMUST00000191307.7 |
||
| CDS CAA 72 bp | CAGGAAAACCAGCTGGATATCCAATTCCTTTGGCATTaGCATAGGGAACGCCAGAAGACCCAGGGCTATAAA | + |
|
Preference number: 6 (lower is better) Translates to: QENQLDIQFLWH*HRERQKTQGYK Trigger: TTTATAGCCCTGGGTCTTCTGGCGTTCCCTATGCAAATGCCAAAGGAATTGGATATCCAGCTGGTTTTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000047534.12 ENSMUST00000167518.8 ENSMUST00000170092.8 ENSMUST00000185231.2 ENSMUST00000185469.7 ENSMUST00000191307.7 |
||