Pregenerated sensors for FAM167B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050493Ensembl transcript IDs: ENSMUST00000052835.9
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TTCAGCTTTTGGAAACCTAAGTGTGCCCACCTTCCCCAGCAGGTAGCCAGAGCCGCCGGGCCCGCAGCCTaGGCAGCTGCCCTGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FSFWKPKCAHLPQQVARAAGPAA*AAALPA Trigger: AGCTGGCAGGGCAGCTGCTCAGGCTGCGGGCCCGGC...GGCTCTGGCTACCTGCTGGGGAAGGTGGGCACACTTAGGTTTCCAAAAGCTGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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| CDS-3UTR GCA 90 bp | TTCAGCTTTTGGAAACCTAAGTGTGCCCACCTTCCCCAGCAGGTAGCCAGAGCCCGCAGCCTGAGCAGCTaGCCTGCCAGCTGCCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: FSFWKPKCAHLPQQVARARSLSS*PASCRS Trigger: GGACCGGCAGCTGGCAGGGCAGCTGCTCAGGCTGCG...GGCTCTGGCTACCTGCTGGGGAAGGTGGGCACACTTAGGTTTCCAAAAGCTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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| CDS-3UTR GCA 90 bp | TTCAGCTTTTGGAAACCTAAGTGTGCCCACCTTCCCCAGCAGGTAGCCAGAGCCCGCGTGAGTCCCAGATaGCGCAGCGGTGGGGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: FSFWKPKCAHLPQQVARARVSPR*RSGGAR Trigger: TCTGGCCCCACCGCTGCGGCATCTGGGACTCACGCG...GGCTCTGGCTACCTGCTGGGGAAGGTGGGCACACTTAGGTTTCCAAAAGCTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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| CDS-3UTR TCA 90 bp | TGCTCTCTAAATTCAGCTTTTGGAAACCTAAGTGTGCCCACCTTCCCCAGCAGGGCCAGCTGCCGGTCCTaGGCCCGCATCTCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: CSLNSAFGNLSVPTFPSRASCRS*ARISCS Trigger: GCTGCAGGAGATGCGGGCTCAGGACCGGCAGCTGGC...CCTGCTGGGGAAGGTGGGCACACTTAGGTTTCCAAAAGCTGAATTTAGAGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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| CDS-3UTR GCA 90 bp | CTCTCTAAATTCAGCTTTTGGAAACCTAAGTGTGCCCACCTTCCCCAGCAGGTACCTGAGCAGCTGCCCTaGCAGCTGCCGGTCCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: LSKFSFWKPKCAHLPQQVPEQLP*QLPVLS Trigger: GCTCAGGACCGGCAGCTGGCAGGGCAGCTGCTCAGG...TACCTGCTGGGGAAGGTGGGCACACTTAGGTTTCCAAAAGCTGAATTTAGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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| CDS-3UTR GCA 90 bp | TGCTCTCTAAATTCAGCTTTTGGAAACCTAAGTGTGCCCACCTTCCCCAGCAGGTCCACTTTCAGTCTGTaGAGCCGGGCCCGCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CSLNSAFGNLSVPTFPSRSTFSL*SRARSL Trigger: CAGGCTGCGGGCCCGGCTGCACAGACTGAAAGTGGA...CCTGCTGGGGAAGGTGGGCACACTTAGGTTTCCAAAAGCTGAATTTAGAGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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| CDS-3UTR CCA 90 bp | TTCAGCTTTTGGAAACCTAAGTGTGCCCACCTTCCCCAGCAGGTAGCCAGAGCCTCTGCAGTTGAAGCTTaGCAGTCAGGGCCTTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: FSFWKPKCAHLPQQVARASAVEA*QSGPSE Trigger: CTCTGAAGGCCCTGACTGCCAAGCTTCAACTGCAGA...GGCTCTGGCTACCTGCTGGGGAAGGTGGGCACACTTAGGTTTCCAAAAGCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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| CDS-3UTR GCA 90 bp | CTCTCTAAATTCAGCTTTTGGAAACCTAAGTGTGCCCACCTTCCCCAGCAGGTAACCCTTCTCTCCCACTaGCTGGAATTTCAGCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LSKFSFWKPKCAHLPQQVTLLSH*LEFQRP Trigger: GGGCCGCTGAAATTCCAGGCAGTGGGAGAGAAGGGT...TACCTGCTGGGGAAGGTGGGCACACTTAGGTTTCCAAAAGCTGAATTTAGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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| CDS-3UTR TCA 90 bp | TACAACAACATTTATTTAGGCTCTGTGACAGTCTACAGAAACCTTGATGGGATTAGCTCCTGGTGCAGGTaGCAGACTTGGTCCACTTTC | + |
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Preference number: 4 (lower is better) Translates to: YNNIYLGSVTVYRNLDGISSWCR*QTWSTF Trigger: GAAAGTGGACCAAGTCTGTCACCTGCACCAGGAGCT...AATCCCATCAAGGTTTCTGTAGACTGTCACAGAGCCTAAATAAATGTTGTTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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| CDS TCA 90 bp | GACAGACTTGGTCCACTTTCAGTCTGTGCAGCCGGGCCCGCAGCCTaGGCAGCTGCCCTGCCAGCTGCCGGTCCTGAGCCCGCATCTCCT | + |
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Preference number: 5 (lower is better) Translates to: DRLGPLSVCAAGPAA*AAALPAAGPEPASP Trigger: AGGAGATGCGGGCTCAGGACCGGCAGCTGGCAGGGCAGCTGCTCAGGCTGCGGGCCCGGCTGCACAGACTGAAAGTGGACCAAGTCTGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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| CDS GCA 90 bp | AGGGTGAAGCGTCTGGCACTGATGTTCATGCGCGTGAGTCCCAGATaGCGCAGCGGTGGGGCCAGAGGCAAGCCAGTCCCAGACTCTAAC | + |
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Preference number: 5 (lower is better) Translates to: RVKRLALMFMRVSPR*RSGGARGKPVPDSN Trigger: GTTAGAGTCTGGGACTGGCTTGCCTCTGGCCCCACCGCTGCGGCATCTGGGACTCACGCGCATGAACATCAGTGCCAGACGCTTCACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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| CDS TCA 90 bp | AACTCCATCTCCAGCTCAGCCTCATCCAGAAGCTCCTGGTGCAGGTaGCAGACTTGGTCCACTTTCAGTCTGTGCAGCCGGGCCCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: NSISSSASSRSSWCR*QTWSTFSLCSRARS Trigger: GCTGCGGGCCCGGCTGCACAGACTGAAAGTGGACCAAGTCTGTCACCTGCACCAGGAGCTTCTGGATGAGGCTGAGCTGGAGATGGAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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| CDS-3UTR CAA 90 bp | TGCTCTCTAAATTCAGCTTTTGGAAACCTAAGTGTGCCCACCTTCCCCAGCAGGTGGCTCAGGTCTAGCTaGGGCTCTGTACCAAGCCCG | + |
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Preference number: 5 (lower is better) Translates to: CSLNSAFGNLSVPTFPSRWLRSS*GSVPSP Trigger: CGGGCTTGGTACAGAGCCCAAGCTAGACCTGAGCCA...CCTGCTGGGGAAGGTGGGCACACTTAGGTTTCCAAAAGCTGAATTTAGAGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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| CDS-3UTR CAA 90 bp | CTCTCTAAATTCAGCTTTTGGAAACCTAAGTGTGCCCACCTTCCCCAGCAGGTAGTGCAGGTGACAGACTaGGTCCACTTTCAGTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: LSKFSFWKPKCAHLPQQVVQVTD*VHFQSV Trigger: CACAGACTGAAAGTGGACCAAGTCTGTCACCTGCAC...TACCTGCTGGGGAAGGTGGGCACACTTAGGTTTCCAAAAGCTGAATTTAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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| CDS TCA 72 bp | GGTCCACTTTCAGTCTGTGCAGCCGGGCCCGCAGCCTaGGCAGCTGCCCTGCCAGCTGCCGGTCCTGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: GPLSVCAAGPAA*AAALPAAGPEP Trigger: GGGCTCAGGACCGGCAGCTGGCAGGGCAGCTGCTCAGGCTGCGGGCCCGGCTGCACAGACTGAAAGTGGACC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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| CDS GCA 72 bp | CGTCTGGCACTGATGTTCATGCGCGTGAGTCCCAGATaGCGCAGCGGTGGGGCCAGAGGCAAGCCAGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: RLALMFMRVSPR*RSGGARGKPVP Trigger: TGGGACTGGCTTGCCTCTGGCCCCACCGCTGCGGCATCTGGGACTCACGCGCATGAACATCAGTGCCAGACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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| CDS CAA 72 bp | ACAGATGGCCCCGGGTCCGACTGGCTCAGGTCTAGCTaGGGCTCTGTACCAAGCCCGGCTCTGGACTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: TDGPGSDWLRSS*GSVPSPALDSG Trigger: GCCAGAGTCCAGAGCCGGGCTTGGTACAGAGCCCAAGCTAGACCTGAGCCAGTCGGACCCGGGGCCATCTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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| CDS CAA 90 bp | GTCAAAGCCACAGATGGCCCCGGGTCCGACTGGCTCAGGTCTAGCTaGGGCTCTGTACCAAGCCCGGCTCTGGACTCTGGCAGTCCACTC | + |
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Preference number: 6 (lower is better) Translates to: VKATDGPGSDWLRSS*GSVPSPALDSGSPL Trigger: GAGTGGACTGCCAGAGTCCAGAGCCGGGCTTGGTACAGAGCCCAAGCTAGACCTGAGCCAGTCGGACCCGGGGCCATCTGTGGCTTTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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| CDS CAA 90 bp | CTCCAGCTCAGCCTCATCCAGAAGCTCCTGGTGCAGGTGACAGACTaGGTCCACTTTCAGTCTGTGCAGCCGGGCCCGCAGCCTGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LQLSLIQKLLVQVTD*VHFQSVQPGPQPEQ Trigger: CTGCTCAGGCTGCGGGCCCGGCTGCACAGACTGAAAGTGGACCAAGTCTGTCACCTGCACCAGGAGCTTCTGGATGAGGCTGAGCTGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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| CDS TCA 72 bp | GCCGGTCCTGAGCCCGCATCTCCTGCAGCTCCCGTCTaGGCCACTCAAGCGCAGAATCCATGGAGTCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: AGPEPASPAAPV*ATQAQNPWSQS Trigger: GCTTTGACTCCATGGATTCTGCGCTTGAGTGGCTCAGACGGGAGCTGCAGGAGATGCGGGCTCAGGACCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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| CDS CAA 72 bp | AGCCTCATCCAGAAGCTCCTGGTGCAGGTGACAGACTaGGTCCACTTTCAGTCTGTGCAGCCGGGCCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: SLIQKLLVQVTD*VHFQSVQPGPQ Trigger: CTGCGGGCCCGGCTGCACAGACTGAAAGTGGACCAAGTCTGTCACCTGCACCAGGAGCTTCTGGATGAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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| CDS TCA 72 bp | TCCAGCTCAGCCTCATCCAGAAGCTCCTGGTGCAGGTaGCAGACTTGGTCCACTTTCAGTCTGTGCAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SSSASSRSSWCR*QTWSTFSLCSR Trigger: CCGGCTGCACAGACTGAAAGTGGACCAAGTCTGTCACCTGCACCAGGAGCTTCTGGATGAGGCTGAGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052835.9 |
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