Pregenerated sensors for FAM167A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035095Ensembl transcript IDs: ENSMUST00000121288.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGGCGAGTGTCACCCAAGGGTCGGGGGTGACCAGAGGCAGGAGGTaGTGGGAAATAAAGGCCTCTTGGGACTTGGCAGTGTTTTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: VASVTQGSGVTRGRR*WEIKASWDLAVFCV Trigger: TACACAAAACACTGCCAAGTCCCAAGAGGCCTTTATTTCCCATCACCTCCTGCCTCTGGTCACCCCCGACCCTTGGGTGACACTCGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR CCA 90 bp | ACTCCCAAGACCTCAGGGGGAGTAACTGGTACCCAAAGTACCACTTaGTCTGAGCCTTCTCTCTCTCACCCTTGGCTGTGGTTTCCCTTC | + |
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Preference number: 1 (lower is better) Translates to: TPKTSGGVTGTQSTT*SEPSLSHPWLWFPF Trigger: GAAGGGAAACCACAGCCAAGGGTGAGAGAGAGAAGGCTCAGACCAAGTGGTACTTTGGGTACCAGTTACTCCCCCTGAGGTCTTGGGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR TCA 90 bp | GCCATGGATCAAGCTAGAAACAGCATGGCCTTGTGGCATCAAGGCTaGAGTTCAAAGTACCTGGGCAGAGCTCCTTCTCTGGGATGCTGG | + |
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Preference number: 1 (lower is better) Translates to: AMDQARNSMALWHQG*SSKYLGRAPSLGCW Trigger: CCAGCATCCCAGAGAAGGAGCTCTGCCCAGGTACTTTGAACTTCAGCCTTGATGCCACAAGGCCATGCTGTTTCTAGCTTGATCCATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR TCA 90 bp | AACACCAAACAGGACAGTGAACATACAGTAAGGCAGGACGCTGGCTaGGGAAGGCAGCTAATGTTGCCACAGACCTACAGACATCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: NTKQDSEHTVRQDAG*GRQLMLPQTYRHLC Trigger: GCAGAGATGTCTGTAGGTCTGTGGCAACATTAGCTGCCTTCCTCAGCCAGCGTCCTGCCTTACTGTATGTTCACTGTCCTGTTTGGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR TCA 90 bp | ATTCCTTTAAGTTTTCCTGTCCTACCACATCCCTGCACAGGTTGCTaGGCCTCCTACATAGGGGCAATTAGAGCTAGCACTAAGAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: IPLSFPVLPHPCTGC*ASYIGAIRASTKRV Trigger: CACCCTCTTAGTGCTAGCTCTAATTGCCCCTATGTAGGAGGCTCAGCAACCTGTGCAGGGATGTGGTAGGACAGGAAAACTTAAAGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR CCA 90 bp | GAAGCTGGCAACTTGTGGGTTTGGCAGAGCATCAGTACCATCTTTTaGAGTTCAAGTTCATTGGCAGAAGATCTAGGCTGGATTCACAGT | + |
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Preference number: 1 (lower is better) Translates to: EAGNLWVWQSISTIF*SSSSLAEDLGWIHS Trigger: ACTGTGAATCCAGCCTAGATCTTCTGCCAATGAACTTGAACTCCAAAAGATGGTACTGATGCTCTGCCAAACCCACAAGTTGCCAGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR CCA 90 bp | ACATATGTCATATATCATATGCCATGGATCAAGCTAGAAACAGCATaGCCTTGTGGCATCAAGGCTGAAGTTCAAAGTACCTGGGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: TYVIYHMPWIKLETA*PCGIKAEVQSTWAE Trigger: CTCTGCCCAGGTACTTTGAACTTCAGCCTTGATGCCACAAGGCCATGCTGTTTCTAGCTTGATCCATGGCATATGATATATGACATATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR CCA 90 bp | GCGTCAGTTACTGTAATAACTGGTGACTGTTATGTTTATGAGGTGTaGTCTCATAAAGCCCAGGCTGACTTGGAGAACTTACTAGGTATC | + |
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Preference number: 1 (lower is better) Translates to: ASVTVITGDCYVYEV*SHKAQADLENLLGI Trigger: GATACCTAGTAAGTTCTCCAAGTCAGCCTGGGCTTTATGAGACCACACCTCATAAACATAACAGTCACCAGTTATTACAGTAACTGACGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR CCA 90 bp | TCAGTATTATCTTTCCATTCCAGTCTGCGTGTGTTGTGTCGTGTGTaGACACAGCTCATGGGGATTATCGGTAGGAAGAAATGTTATATA | + |
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Preference number: 1 (lower is better) Translates to: SVLSFHSSLRVLCRV*TQLMGIIGRKKCYI Trigger: TATATAACATTTCTTCCTACCGATAATCCCCATGAGCTGTGTCCACACACGACACAACACACGCAGACTGGAATGGAAAGATAATACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR CCA 90 bp | TCTACCAAAGCTATACAAGGTACATATGTCATATATCATATGCCATaGATCAAGCTAGAAACAGCATGGCCTTGTGGCATCAAGGCTGAA | + |
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Preference number: 1 (lower is better) Translates to: STKAIQGTYVIYHMP*IKLETAWPCGIKAE Trigger: TTCAGCCTTGATGCCACAAGGCCATGCTGTTTCTAGCTTGATCCATGGCATATGATATATGACATATGTACCTTGTATAGCTTTGGTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR-3UTR GCA 90 bp | CAGACCTCACTAGACACACCCAGAGTCGAGCAGACCTCACTAGACACACCCAGAGATTGTGGCCAGGTGTaGCGTACCAGGTCTTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: QTSLDTPRVEQTSLDTPRDCGQV*RTRSSL Trigger: CAGGGAAGACCTGGTACGGCACACCTGGCCACAATC...TCTGGGTGTGTCTAGTGAGGTCTGCTCGACTCTGGGTGTGTCTAGTGAGGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR CAA 90 bp | GTCGGGGGTGACCAGAGGCAGGAGGTGATGGGAAATAAAGGCCTCTaGGGACTTGGCAGTGTTTTGTGTAGTCTTGAAGGAAGGGACTGG | + |
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Preference number: 2 (lower is better) Translates to: VGGDQRQEVMGNKGL*GLGSVLCSLEGRDW Trigger: CCAGTCCCTTCCTTCAAGACTACACAAAACACTGCCAAGTCCCAAGAGGCCTTTATTTCCCATCACCTCCTGCCTCTGGTCACCCCCGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACCTCACTAGACACACCCAGAGTCGAGCAGACCTCACTAGACACACCCAGAGATCAGGCACAGTCTTaGGAGAGGCTCAGGATGGAA | + |
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Preference number: 2 (lower is better) Translates to: QTSLDTPRVEQTSLDTPRDQAQS*ERLRME Trigger: TTCCATCCTGAGCCTCTCCCAAGACTGTGCCTGATC...TCTGGGTGTGTCTAGTGAGGTCTGCTCGACTCTGGGTGTGTCTAGTGAGGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR-3UTR CCA 90 bp | GCTAGGTGTTCTCCTGGGGTTGCGGGTGGCAGAGAGGTAACTGAAGTGGTTGTATCTCACCCTTGGCTGTaGTTTCCCTTCCATCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: ARCSPGVAGGREVTEVVVSHPWL*FPFHPK Trigger: CTTAGGATGGAAGGGAAACCACAGCCAAGGGTGAGA...TACAACCACTTCAGTTACCTCTCTGCCACCCGCAACCCCAGGAGAACACCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACCTCACTAGACACACCCAGAGTCGAGCAGACCTCACTAGACACACCCAGAGAAGTTCAAAGTACCTaGGCAGAGCTCCTTCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: QTSLDTPRVEQTSLDTPREVQST*AELLLW Trigger: CCAGAGAAGGAGCTCTGCCCAGGTACTTTGAACTTC...TCTGGGTGTGTCTAGTGAGGTCTGCTCGACTCTGGGTGTGTCTAGTGAGGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR CAA 90 bp | CAGGAGGTGATGGGAAATAAAGGCCTCTTGGGACTTGGCAGTGTTTaGTGTAGTCTTGAAGGAAGGGACTGGGGTCAAGGCCTCTGGACT | + |
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Preference number: 2 (lower is better) Translates to: QEVMGNKGLLGLGSV*CSLEGRDWGQGLWT Trigger: AGTCCAGAGGCCTTGACCCCAGTCCCTTCCTTCAAGACTACACAAAACACTGCCAAGTCCCAAGAGGCCTTTATTTCCCATCACCTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR-3UTR GCA 90 bp | TTTTCCCAGAGAACAAAAGCAGGAGGAAGATGCTGGGTGCTTTCCTATCTGAGCGTGTTCTCCTGGGGTTaGGGGTGGCAGAGAGGTAAC | + |
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Preference number: 2 (lower is better) Translates to: FSQRTKAGGRCWVLSYLSVFSWG*GWQRGN Trigger: GTTACCTCTCTGCCACCCGCAACCCCAGGAGAACAC...GCTCAGATAGGAAAGCACCCAGCATCTTCCTCCTGCTTTTGTTCTCTGGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGTGACTGTTATGTTTATGAGGTGTGGTCTCATAAAGCCCAGGCTGACTTGGGCCCTTCTGTGCTCATaGGCAGACCTCACTAGACAC | + |
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Preference number: 2 (lower is better) Translates to: LVTVMFMRCGLIKPRLTWALLCS*ADLTRH Trigger: GTGTCTAGTGAGGTCTGCTCATGAGCACAGAAGGGC...CCAAGTCAGCCTGGGCTTTATGAGACCACACCTCATAAACATAACAGTCACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR-3UTR CCA 90 bp | AAACAGCATGGCCTTGTGGCATCAAGGCTGAAGTTCAAAGTACCTGGGCAGAGCACTACCACCAGGTCCTaGTGCCTTTTACTCCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: KQHGLVASRLKFKVPGQSTTTRS*CLLLPR Trigger: TCTTGGGAGTAAAAGGCACCAGGACCTGGTGGTAGT...GCTCTGCCCAGGTACTTTGAACTTCAGCCTTGATGCCACAAGGCCATGCTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCTGCATTCCCACTTGTCATCTTGTTATTCCTTTAAGTTTTCCTGTCCTACCCCCTGCACAGGTTGCTaGGCCTCCTACATAGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: SLHSHLSSCYSFKFSCPTPCTGC*ASYIGA Trigger: TGCCCCTATGTAGGAGGCTCAGCAACCTGTGCAGGG...GGTAGGACAGGAAAACTTAAAGGAATAACAAGATGACAAGTGGGAATGCAGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAACTTGTGGGTTTGGCAGAGCATCAGTACCATCTTTTGGAGTTCAAGTTCAACCACCAGGTCCTGGTaGCTTTTACTCCCAAGACCT | + |
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Preference number: 2 (lower is better) Translates to: GNLWVWQSISTIFWSSSSTTRSW*LLLPRP Trigger: AGGTCTTGGGAGTAAAAGGCACCAGGACCTGGTGGT...TGAACTTGAACTCCAAAAGATGGTACTGATGCTCTGCCAAACCCACAAGTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCCCAGAGAACAAAAGCAGGAGGAAGATGCTGGGTGCTTTCCTATCTGAGCGGCAACTTGTGGGTTTaGCAGAGCATCAGTACCATC | + |
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Preference number: 2 (lower is better) Translates to: FSQRTKAGGRCWVLSYLSGNLWV*QSISTI Trigger: GATGGTACTGATGCTCTGCCAAACCCACAAGTTGCC...GCTCAGATAGGAAAGCACCCAGCATCTTCCTCCTGCTTTTGTTCTCTGGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGTGACTGTTATGTTTATGAGGTGTGGTCTCATAAAGCCCAGGCTGACTTGGTGGCAGAGAGGTAACTaGAGTGGTTGTAATGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LVTVMFMRCGLIKPRLTWWQRGN*SGCNGR Trigger: TCTCCCATTACAACCACTTCAGTTACCTCTCTGCCA...CCAAGTCAGCCTGGGCTTTATGAGACCACACCTCATAAACATAACAGTCACCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCCCAGAGAACAAAAGCAGGAGGAAGATGCTGGGTGCTTTCCTATCTGAGCTATAAGAACAAGCTTTaGCAGGGGTATGGGAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: FSQRTKAGGRCWVLSYLSYKNKL*QGYGRG Trigger: ACCCCTCCCATACCCCTGCCAAAGCTTGTTCTTATA...GCTCAGATAGGAAAGCACCCAGCATCTTCCTCCTGCTTTTGTTCTCTGGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR CAA 90 bp | AGAAGCTGGCAACTTGTGGGTTTGGCAGAGCATCAGTACCATCTTTaGGAGTTCAAGTTCATTGGCAGAAGATCTAGGCTGGATTCACAG | + |
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Preference number: 2 (lower is better) Translates to: RSWQLVGLAEHQYHL*EFKFIGRRSRLDSQ Trigger: CTGTGAATCCAGCCTAGATCTTCTGCCAATGAACTTGAACTCCAAAAGATGGTACTGATGCTCTGCCAAACCCACAAGTTGCCAGCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTGTGGGTTTGGCAGAGCATCAGTACCATCTTTTGGAGTTCAAGTTCATTGGCTCAGGATGGAATTTTaGGATCCCTGGGGTCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: TCGFGRASVPSFGVQVHWLRMEF*DPWGLW Trigger: CCAAAGACCCCAGGGATCCCAAAATTCCATCCTGAG...CCAATGAACTTGAACTCCAAAAGATGGTACTGATGCTCTGCCAAACCCACAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGTGACTGTTATGTTTATGAGGTGTGGTCTCATAAAGCCCAGGCTGACTTGGTGTGGCCTACTCAACTaGTTTTCCATTTGGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: LVTVMFMRCGLIKPRLTWCGLLN*FSIWTG Trigger: TCCTGTCCAAATGGAAAACCAGTTGAGTAGGCCACA...CCAAGTCAGCCTGGGCTTTATGAGACCACACCTCATAAACATAACAGTCACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAACTTGTGGGTTTGGCAGAGCATCAGTACCATCTTTTGGAGTTCAAGTTCAGTACCAGGTCTTCCCTaGACTGAAGAGCTTAACATT | + |
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Preference number: 2 (lower is better) Translates to: GNLWVWQSISTIFWSSSSVPGLP*TEELNI Trigger: AATGTTAAGCTCTTCAGTTCAGGGAAGACCTGGTAC...TGAACTTGAACTCCAAAAGATGGTACTGATGCTCTGCCAAACCCACAAGTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTCATCTTGTTATTCCTTTAAGTTTTCCTGTCCTACCACATCCCTGCACAGGTCTCTCTCTCACCCTTaGCTGTGGTTTCCCTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: LSSCYSFKFSCPTTSLHRSLSHP*LWFPFH Trigger: ATGGAAGGGAAACCACAGCCAAGGGTGAGAGAGAGA...CCTGTGCAGGGATGTGGTAGGACAGGAAAACTTAAAGGAATAACAAGATGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTGTGGGTTTGGCAGAGCATCAGTACCATCTTTTGGAGTTCAAGTTCATTGGAGACAGCAGGATACCTaGGTTGCTCTACCAAAGCTA | + |
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Preference number: 2 (lower is better) Translates to: TCGFGRASVPSFGVQVHWRQQDT*VALPKL Trigger: TAGCTTTGGTAGAGCAACCCAGGTATCCTGCTGTCT...CCAATGAACTTGAACTCCAAAAGATGGTACTGATGCTCTGCCAAACCCACAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGTGACTGTTATGTTTATGAGGTGTGGTCTCATAAAGCCCAGGCTGACTTGGTCAATTGAAATCCATTaGTTAGATCAGGCACAGTCT | + |
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Preference number: 2 (lower is better) Translates to: LVTVMFMRCGLIKPRLTWSIEIH*LDQAQS Trigger: AGACTGTGCCTGATCTAAGCAATGGATTTCAATTGA...CCAAGTCAGCCTGGGCTTTATGAGACCACACCTCATAAACATAACAGTCACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR CAA 90 bp | GAGGTAACTGAAGTGGTTGTAATGGGAGACAGCAGGATACCTGGGTaGCTCTACCAAAGCTATACAAGGTACATATGTCATATATCATAT | + |
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Preference number: 2 (lower is better) Translates to: EVTEVVVMGDSRIPG*LYQSYTRYICHISY Trigger: ATATGATATATGACATATGTACCTTGTATAGCTTTGGTAGAGCAACCCAGGTATCCTGCTGTCTCCCATTACAACCACTTCAGTTACCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAAATTGTCAATTGATTATGTAATAGCACTTGGTATTGCTACAGGGGTAGGTAAGCTAGAAACAGCATaGCCTTGTGGCATCAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: CKLSIDYVIALGIATGVGKLETA*PCGIKA Trigger: AGCCTTGATGCCACAAGGCCATGCTGTTTCTAGCTT...ACCTACCCCTGTAGCAATACCAAGTGCTATTACATAATCAATTGACAATTTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAAATTGTCAATTGATTATGTAATAGCACTTGGTATTGCTACAGGGGTAGGTAACTGGTTTTCCATTTaGACAGGATTCAGACAGGTA | + |
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Preference number: 2 (lower is better) Translates to: CKLSIDYVIALGIATGVGNWFSI*TGFRQV Trigger: TACCTGTCTGAATCCTGTCCAAATGGAAAACCAGTT...ACCTACCCCTGTAGCAATACCAAGTGCTATTACATAATCAATTGACAATTTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR TCA 72 bp | GTCACCCAAGGGTCGGGGGTGACCAGAGGCAGGAGGTaGTGGGAAATAAAGGCCTCTTGGGACTTGGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: VTQGSGVTRGRR*WEIKASWDLAV Trigger: CACTGCCAAGTCCCAAGAGGCCTTTATTTCCCATCACCTCCTGCCTCTGGTCACCCCCGACCCTTGGGTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR TCA 72 bp | GTGTTCTCCTGGGGTTGCGGGTGGCAGAGAGGTAACTaGAGTGGTTGTAATGGGAGACAGCAGGATACCTGG | + |
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Preference number: 3 (lower is better) Translates to: VFSWGCGWQRGN*SGCNGRQQDTW Trigger: CCAGGTATCCTGCTGTCTCCCATTACAACCACTTCAGTTACCTCTCTGCCACCCGCAACCCCAGGAGAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR TCA 72 bp | ATAGCACTTGGTATTGCTACAGGGGTAGGTCTTAGATaGGGCCAGGTTATGGCCAGGCCTGTCCAGGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: IALGIATGVGLR*GQVMARPVQAL Trigger: GAGGGCCTGGACAGGCCTGGCCATAACCTGGCCTCATCTAAGACCTACCCCTGTAGCAATACCAAGTGCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR CCA 72 bp | ACCTCAGGGGGAGTAACTGGTACCCAAAGTACCACTTaGTCTGAGCCTTCTCTCTCTCACCCTTGGCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: TSGGVTGTQSTT*SEPSLSHPWLW Trigger: CCACAGCCAAGGGTGAGAGAGAGAAGGCTCAGACCAAGTGGTACTTTGGGTACCAGTTACTCCCCCTGAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR-3UTR CAA 90 bp | GCTAGGTGTTCTCCTGGGGTTGCGGGTGGCAGAGAGGTAACTGAAGTGGTTGTATTCTCTCTCTCACCCTaGGCTGTGGTTTCCCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: ARCSPGVAGGREVTEVVVFSLSP*AVVSLP Trigger: TGGAAGGGAAACCACAGCCAAGGGTGAGAGAGAGAA...TACAACCACTTCAGTTACCTCTCTGCCACCCGCAACCCCAGGAGAACACCTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR TCA 72 bp | AGAATACAGGATGGTCCTTCTTTCATGTGCTCTCTGTaGTGTGGCGAGTGTCACCCAAGGGTCGGGGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: RIQDGPSFMCSL*CGECHPRVGGD Trigger: GTCACCCCCGACCCTTGGGTGACACTCGCCACATCACAGAGAGCACATGAAAGAAGGACCATCCTGTATTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR TCA 72 bp | TTGGGTCTTGAACATGAAGACCCAGGTATACAAAGCTaGAGCCCCTGGCATACTACCACCAGGTCCTGGTGC | + |
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Preference number: 3 (lower is better) Translates to: LGLEHEDPGIQS*SPWHTTTRSWC Trigger: GCACCAGGACCTGGTGGTAGTATGCCAGGGGCTTCAGCTTTGTATACCTGGGTCTTCATGTTCAAGACCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR TCA 72 bp | CAGGACAGTGAACATACAGTAAGGCAGGACGCTGGCTaGGGAAGGCAGCTAATGTTGCCACAGACCTACAGA | + |
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Preference number: 3 (lower is better) Translates to: QDSEHTVRQDAG*GRQLMLPQTYR Trigger: TCTGTAGGTCTGTGGCAACATTAGCTGCCTTCCTCAGCCAGCGTCCTGCCTTACTGTATGTTCACTGTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR CCA 72 bp | CACCCAGAGTATGAGGAACTTGTGTTAAGAGGATTGTaGCCAGGTGTGCCGTACCAGGTCTTCCCTGAACTG | + |
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Preference number: 3 (lower is better) Translates to: HPEYEELVLRGL*PGVPYQVFPEL Trigger: CAGTTCAGGGAAGACCTGGTACGGCACACCTGGCCACAATCCTCTTAACACAAGTTCCTCATACTCTGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR TCA 72 bp | AGTTTTCCTGTCCTACCACATCCCTGCACAGGTTGCTaGGCCTCCTACATAGGGGCAATTAGAGCTAGCACT | + |
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Preference number: 3 (lower is better) Translates to: SFPVLPHPCTGC*ASYIGAIRAST Trigger: AGTGCTAGCTCTAATTGCCCCTATGTAGGAGGCTCAGCAACCTGTGCAGGGATGTGGTAGGACAGGAAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR TCA 72 bp | CAAGCTAGAAACAGCATGGCCTTGTGGCATCAAGGCTaGAGTTCAAAGTACCTGGGCAGAGCTCCTTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: QARNSMALWHQG*SSKYLGRAPSL Trigger: CAGAGAAGGAGCTCTGCCCAGGTACTTTGAACTTCAGCCTTGATGCCACAAGGCCATGCTGTTTCTAGCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR TCA 72 bp | CGGGGATTCTACCACCAGAGTGAACAGTTAATGGTTTaGGCTCACCACGGAAGGCAGAGAGCTAACAGACAC | + |
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Preference number: 3 (lower is better) Translates to: RGFYHQSEQLMV*AHHGRQRANRH Trigger: GTGTCTGTTAGCTCTCTGCCTTCCGTGGTGAGCTCAAACCATTAACTGTTCACTCTGGTGGTAGAATCCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR TCA 72 bp | AGAGTCGAGCAGACCTCACTAGACACACCCAGAGTATaGGGAACTTGTGTTAAGAGGATTGTGGCCAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: RVEQTSLDTPRV*GTCVKRIVARC Trigger: ACACCTGGCCACAATCCTCTTAACACAAGTTCCTCATACTCTGGGTGTGTCTAGTGAGGTCTGCTCGACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| 3UTR CCA 72 bp | CTTGGCAGTGTTTTGTGTAGTCTTGAAGGAAGGGACTaGGGTCAAGGCCTCTGGACTTCAGGGCTCTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LGSVLCSLEGRD*GQGLWTSGLLK Trigger: TTTTAAGAGCCCTGAAGTCCAGAGGCCTTGACCCCAGTCCCTTCCTTCAAGACTACACAAAACACTGCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTGACTGTTATGTTTATGAGGTGTGGTCTCATAAAGCCCAGGCTGACTTGGTGGCAACTTGTGGGTTaGGCAGAGCATCAGTACCAT | + |
|
Preference number: 3 (lower is better) Translates to: LVTVMFMRCGLIKPRLTWWQLVG*AEHQYH Trigger: ATGGTACTGATGCTCTGCCAAACCCACAAGTTGCCA...CCAAGTCAGCCTGGGCTTTATGAGACCACACCTCATAAACATAACAGTCACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| 3UTR CCA 72 bp | TCTTTCCATTCCAGTCTGCGTGTGTTGTGTCGTGTGTaGACACAGCTCATGGGGATTATCGGTAGGAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SFHSSLRVLCRV*TQLMGIIGRKK Trigger: TTTCTTCCTACCGATAATCCCCATGAGCTGTGTCCACACACGACACAACACACGCAGACTGGAATGGAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| 3UTR CCA 72 bp | AAGTTTTCCCAGAGAACAAAAGCAGGAGGAAGATGCTaGGTGCTTTCCTATCTGAGCACAGACTGCTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: KFSQRTKAGGRC*VLSYLSTDCSV Trigger: GACTGAGCAGTCTGTGCTCAGATAGGAAAGCACCCAGCATCTTCCTCCTGCTTTTGTTCTCTGGGAAAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCCCAGAGAACAAAAGCAGGAGGAAGATGCTGGGTGCTTTCCTATCTGAGCATGTCTGCAGACTCTTaGGGTCTTGAACATGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: FSQRTKAGGRCWVLSYLSMSADS*GLEHED Trigger: GTCTTCATGTTCAAGACCCAAAGAGTCTGCAGACAT...GCTCAGATAGGAAAGCACCCAGCATCTTCCTCCTGCTTTTGTTCTCTGGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| 3UTR-3UTR CAA 90 bp | TACATATGTCATATATCATATGCCATGGATCAAGCTAGAAACAGCATGGCCTTGACATCCCTGCACAGGTaGCTGAGCCTCCTACATAGG | + |
|
Preference number: 3 (lower is better) Translates to: YICHISYAMDQARNSMALTSLHR*LSLLHR Trigger: CCTATGTAGGAGGCTCAGCAACCTGTGCAGGGATGT...CAAGGCCATGCTGTTTCTAGCTTGATCCATGGCATATGATATATGACATATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTGACTGTTATGTTTATGAGGTGTGGTCTCATAAAGCCCAGGCTGACTTGGAGCCTGCATTCCCACTaGTCATCTTGTTATTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LVTVMFMRCGLIKPRLTWSLHSH*SSCYSF Trigger: AAAGGAATAACAAGATGACAAGTGGGAATGCAGGCT...CCAAGTCAGCCTGGGCTTTATGAGACCACACCTCATAAACATAACAGTCACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| 3UTR-3UTR CAA 90 bp | TACATATGTCATATATCATATGCCATGGATCAAGCTAGAAACAGCATGGCCTTGGGAGGGGTGTCCCCTTaGGGATTCAACATCATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: YICHISYAMDQARNSMALGGVSP*GFNIIA Trigger: TGCTATGATGTTGAATCCCAAAGGGGACACCCCTCC...CAAGGCCATGCTGTTTCTAGCTTGATCCATGGCATATGATATATGACATATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| 3UTR TCA 72 bp | TCTGAGCACAGACTGCTCAGTCACATAGTTAGTTGCTaGCCATATCCAAGTCGATCACTCTGCTTTGCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SEHRLLSHIVSC*PYPSRSLCFAL Trigger: TAAAGCAAAGCAGAGTGATCGACTTGGATATGGTCAGCAACTAACTATGTGACTGAGCAGTCTGTGCTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| 3UTR CCA 72 bp | GCTAGCACTAAGAGGGTGGTAACAATACGTGAGAGATaGGTATACTTGGCACAATCTAATCTTCTCAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: ASTKRVVTIRER*VYLAQSNLLSF Trigger: GAAGCTGAGAAGATTAGATTGTGCCAAGTATACCCATCTCTCACGTATTGTTACCACCCTCTTAGTGCTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| 3UTR CCA 72 bp | ATATATCATATGCCATGGATCAAGCTAGAAACAGCATaGCCTTGTGGCATCAAGGCTGAAGTTCAAAGTACC | + |
|
Preference number: 3 (lower is better) Translates to: IYHMPWIKLETA*PCGIKAEVQST Trigger: GGTACTTTGAACTTCAGCCTTGATGCCACAAGGCCATGCTGTTTCTAGCTTGATCCATGGCATATGATATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| 3UTR CCA 72 bp | ACTGTAATAACTGGTGACTGTTATGTTTATGAGGTGTaGTCTCATAAAGCCCAGGCTGACTTGGAGAACTTA | + |
|
Preference number: 3 (lower is better) Translates to: TVITGDCYVYEV*SHKAQADLENL Trigger: TAAGTTCTCCAAGTCAGCCTGGGCTTTATGAGACCACACCTCATAAACATAACAGTCACCAGTTATTACAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS-3UTR TCA 90 bp | AAACAGCATGGCCTTGTGGCATCAAGGCTGAAGTTCAAAGTACCTGGGCAGAGCCTCCTCGGAGGCGCATaGGCTGCCTGGCCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQHGLVASRLKFKVPGQSLLGGA*AAWPAA Trigger: AGCAGCTGGCCAGGCAGCTCATGCGCCTCCGAGGAG...GCTCTGCCCAGGTACTTTGAACTTCAGCCTTGATGCCACAAGGCCATGCTGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS-3UTR TCA 90 bp | CAGACCTCACTAGACACACCCAGAGTCGAGCAGACCTCACTAGACACACCCAGAGTGGCATGGAAAGGCTaGAAGAGGATGCCAGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QTSLDTPRVEQTSLDTPRVAWKG*KRMPAG Trigger: CCCCGCTGGCATCCTCTTTCAGCCTTTCCATGCCAC...TCTGGGTGTGTCTAGTGAGGTCTGCTCGACTCTGGGTGTGTCTAGTGAGGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS-3UTR GCA 90 bp | AAACAGCATGGCCTTGTGGCATCAAGGCTGAAGTTCAAAGTACCTGGGCAGAGCAGCTGCCTGGCCAGCTaGTGGTCCTGGAGCCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: KQHGLVASRLKFKVPGQSSCLAS*WSWSRI Trigger: GATGCGGCTCCAGGACCAGCAGCTGGCCAGGCAGCT...GCTCTGCCCAGGTACTTTGAACTTCAGCCTTGATGCCACAAGGCCATGCTGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCCCAGAGAACAAAAGCAGGAGGAAGATGCTGGGTGCTTTCCTATCTGAGCCGGAGGCGCATGAGCTaGCTGGCCAGCTGCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSQRTKAGGRCWVLSYLSRRRMS*LASCWS Trigger: GGACCAGCAGCTGGCCAGGCAGCTCATGCGCCTCCG...GCTCAGATAGGAAAGCACCCAGCATCTTCCTCCTGCTTTTGTTCTCTGGGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCCCAGAGAACAAAAGCAGGAGGAAGATGCTGGGTGCTTTCCTATCTGAGCGGCACTCGCGGAAGGTaGGAGAAGGTCTCGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSQRTKAGGRCWVLSYLSGTRGR*EKVSGL Trigger: GAGCCCCGAGACCTTCTCCCACCTTCCGCGAGTGCC...GCTCAGATAGGAAAGCACCCAGCATCTTCCTCCTGCTTTTGTTCTCTGGGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTGACTGTTATGTTTATGAGGTGTGGTCTCATAAAGCCCAGGCTGACTTGGTTGAGCATCCTCCGGTaGAGGCGGCAGGTCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LVTVMFMRCGLIKPRLTWLSILR*RRQVCS Trigger: CGAGCAGACCTGCCGCCTGCACCGGAGGATGCTCAA...CCAAGTCAGCCTGGGCTTTATGAGACCACACCTCATAAACATAACAGTCACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS-3UTR CCA 90 bp | GGCAACTTGTGGGTTTGGCAGAGCATCAGTACCATCTTTTGGAGTTCAAGTTCAGCCAGCTGCTGGTCCTaGAGCCGCATCTCTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GNLWVWQSISTIFWSSSSASCWS*SRISAS Trigger: ACTGGCAGAGATGCGGCTCCAGGACCAGCAGCTGGC...TGAACTTGAACTCCAAAAGATGGTACTGATGCTCTGCCAAACCCACAAGTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| 3UTR CAA 72 bp | AAGGCCTCTTGGGACTTGGCAGTGTTTTGTGTAGTCTaGAAGGAAGGGACTGGGGTCAAGGCCTCTGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: KASWDLAVFCVV*KEGTGVKASGL Trigger: AAGTCCAGAGGCCTTGACCCCAGTCCCTTCCTTCAAGACTACACAAAACACTGCCAAGTCCCAAGAGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS-3UTR TCA 90 bp | AAACAGCATGGCCTTGTGGCATCAAGGCTGAAGTTCAAAGTACCTGGGCAGAGCCGATCTTCAACTTGTTaGTGTCTCCTCGGAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KQHGLVASRLKFKVPGQSRSSTC*CLLGGA Trigger: TGCGCCTCCGAGGAGACATCAACAAGTTGAAGATCG...GCTCTGCCCAGGTACTTTGAACTTCAGCCTTGATGCCACAAGGCCATGCTGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS-3UTR GCA 90 bp | TTGTCATCTTGTTATTCCTTTAAGTTTTCCTGTCCTACCACATCCCTGCACAGGCTCTCCACCCCCACATaGTCCCTGCTCCAGACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSCYSFKFSCPTTSLHRLSTPT*SLLQTR Trigger: GCGAGTCTGGAGCAGGGAGCATGTGGGGGTGGAGAG...CCTGTGCAGGGATGTGGTAGGACAGGAAAACTTAAAGGAATAACAAGATGACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTGACTGTTATGTTTATGAGGTGTGGTCTCATAAAGCCCAGGCTGACTTGGCTGGAGCCGCATCTCTaGCAGTTCCTTTCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVTVMFMRCGLIKPRLTWLEPHL*QFLSEP Trigger: TGGCTCAGAAAGGAACTGGCAGAGATGCGGCTCCAG...CCAAGTCAGCCTGGGCTTTATGAGACCACACCTCATAAACATAACAGTCACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCATCTTGTTATTCCTTTAAGTTTTCCTGTCCTACCACATCCCTGCACAGGTGCCTGGCCAGCTGCTaGTCCTGGAGCCGCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSCYSFKFSCPTTSLHRCLASC*SWSRIS Trigger: AGAGATGCGGCTCCAGGACCAGCAGCTGGCCAGGCA...CCTGTGCAGGGATGTGGTAGGACAGGAAAACTTAAAGGAATAACAAGATGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| 3UTR CAA 72 bp | ATGGGAAATAAAGGCCTCTTGGGACTTGGCAGTGTTTaGTGTAGTCTTGAAGGAAGGGACTGGGGTCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MGNKGLLGLGSV*CSLEGRDWGQG Trigger: GCCTTGACCCCAGTCCCTTCCTTCAAGACTACACAAAACACTGCCAAGTCCCAAGAGGCCTTTATTTCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCCCAGAGAACAAAAGCAGGAGGAAGATGCTGGGTGCTTTCCTATCTGAGCAAGGCTGAAAGAGGATaGCAGCGGGGAGTCACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSQRTKAGGRCWVLSYLSKAERG*QRGVTK Trigger: TTTTGTGACTCCCCGCTGGCATCCTCTTTCAGCCTT...GCTCAGATAGGAAAGCACCCAGCATCTTCCTCCTGCTTTTGTTCTCTGGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS-3UTR CCA 90 bp | TACATATGTCATATATCATATGCCATGGATCAAGCTAGAAACAGCATGGCCTTGCTTCCAGCTTGCCCGTaGTCAGTGGCCTGTCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: YICHISYAMDQARNSMALLPACP*SVACHP Trigger: GGGGTGACAGGCCACTGACCACGGGCAAGCTGGAAG...CAAGGCCATGCTGTTTCTAGCTTGATCCATGGCATATGATATATGACATATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS-3UTR GCA 90 bp | TGTAAATTGTCAATTGATTATGTAATAGCACTTGGTATTGCTACAGGGGTAGGTCCCCCACATGCTCCCTaGTCCAGACTCGCCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CKLSIDYVIALGIATGVGPPHAP*SRLASC Trigger: GCAAGAGGCGAGTCTGGAGCAGGGAGCATGTGGGGG...ACCTACCCCTGTAGCAATACCAAGTGCTATTACATAATCAATTGACAATTTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| 3UTR CAA 72 bp | CTGAGAGCCCTGCCTTACATAATGTCTGCAGACTCTTaGGGTCTTGAACATGAAGACCCAGGTATACAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRALPYIMSADS*GLEHEDPGIQS Trigger: GCTTTGTATACCTGGGTCTTCATGTTCAAGACCCAAAGAGTCTGCAGACATTATGTAAGGCAGGGCTCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| 3UTR CAA 72 bp | CAACTTGTGGGTTTGGCAGAGCATCAGTACCATCTTTaGGAGTTCAAGTTCATTGGCAGAAGATCTAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QLVGLAEHQYHL*EFKFIGRRSRL Trigger: CAGCCTAGATCTTCTGCCAATGAACTTGAACTCCAAAAGATGGTACTGATGCTCTGCCAAACCCACAAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| 3UTR CAA 72 bp | CATTCAGTATTATCTTTCCATTCCAGTCTGCGTGTGTaGTGTCGTGTGTGGACACAGCTCATGGGGATTATC | + |
|
Preference number: 4 (lower is better) Translates to: HSVLSFHSSLRV*CRVWTQLMGII Trigger: GATAATCCCCATGAGCTGTGTCCACACACGACACAACACACGCAGACTGGAATGGAAAGATAATACTGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS-3UTR GCA 90 bp | TACATATGTCATATATCATATGCCATGGATCAAGCTAGAAACAGCATGGCCTTGTGCAGGCGGCAGGTCTaGTCGATCTTCAACTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YICHISYAMDQARNSMALCRRQV*SIFNLL Trigger: CAACAAGTTGAAGATCGAGCAGACCTGCCGCCTGCA...CAAGGCCATGCTGTTTCTAGCTTGATCCATGGCATATGATATATGACATATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| 3UTR CAA 72 bp | CCAAACTCTGTGTGGCCTACTCAACTGGTTTTCCATTaGGACAGGATTCAGACAGGTATTAACAAGTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PNSVWPTQLVFH*DRIQTGINKLA Trigger: TGCTAACTTGTTAATACCTGTCTGAATCCTGTCCAAATGGAAAACCAGTTGAGTAGGCCACACAGAGTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| 3UTR CAA 72 bp | CAGAGCATCAGTACCATCTTTTGGAGTTCAAGTTCATaGGCAGAAGATCTAGGCTGGATTCACAGTAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: QSISTIFWSSSS*AEDLGWIHSNF Trigger: GAAATTACTGTGAATCCAGCCTAGATCTTCTGCCAATGAACTTGAACTCCAAAAGATGGTACTGATGCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS CCA 90 bp | GGCTCTCCACCCCCACATGCTCCCTGCTCCAGACTCGCCTCTTGCTaGGCAGCTGGCCTTGGGAAAGGCCATGTCTGCTCTTCCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSPPPHAPCSRLASC*AAGLGKGHVCSSSL Trigger: CAGGCTGGAAGAGCAGACATGGCCTTTCCCAAGGCCAGCTGCCCAGCAAGAGGCGAGTCTGGAGCAGGGAGCATGTGGGGGTGGAGAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS TCA 90 bp | GGTCGGACAGCTCATCCCGCTCCTCCAGCTCAAAGGCGGCATCGTTaGGCATCCTCCGGTGCAGGCGGCAGGTCTGCTCGATCTTCAACT | + |
|
Preference number: 5 (lower is better) Translates to: GRTAHPAPPAQRRHR*ASSGAGGRSARSST Trigger: AGTTGAAGATCGAGCAGACCTGCCGCCTGCACCGGAGGATGCTCAACGATGCCGCCTTTGAGCTGGAGGAGCGGGATGAGCTGTCCGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS GCA 90 bp | AAAGGCTCTCCACCCCCACATGCTCCCTGCTCCAGACTCGCCTCTTaGTGGGCAGCTGGCCTTGGGAAAGGCCATGTCTGCTCTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KGSPPPHAPCSRLAS*WAAGLGKGHVCSSS Trigger: GCTGGAAGAGCAGACATGGCCTTTCCCAAGGCCAGCTGCCCAGCAAGAGGCGAGTCTGGAGCAGGGAGCATGTGGGGGTGGAGAGCCTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS GCA 90 bp | GGCTCCTTTAGAGGCATCAAAGGCTCTCCACCCCCACATGCTCCCTaGTCCAGACTCGCCTCTTGCTGGGCAGCTGGCCTTGGGAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSFRGIKGSPPPHAP*SRLASCWAAGLGKG Trigger: GCCTTTCCCAAGGCCAGCTGCCCAGCAAGAGGCGAGTCTGGAGCAGGGAGCATGTGGGGGTGGAGAGCCTTTGATGCCTCTAAAGGAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS CCA 90 bp | GTCTCCAGCCTCAGCTTCTCAGTGAGGGCCTTCAGACTGAGGAGGTaGTCATCAGGAGGTACGGCTGCCCCGGCTGGCCTGTCTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSSLSFSVRAFRLRR*SSGGTAAPAGLSFS Trigger: TGAGAAAGACAGGCCAGCCGGGGCAGCCGTACCTCCTGATGACCACCTCCTCAGTCTGAAGGCCCTCACTGAGAAGCTGAGGCTGGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS GCA 90 bp | TGCTCGATCTTCAACTTGTTGATGTCTCCTCGGAGGCGCATGAGCTaGCTGGCCAGCTGCTGGTCCTGGAGCCGCATCTCTGCCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSIFNLLMSPRRRMS*LASCWSWSRISASS Trigger: GGAACTGGCAGAGATGCGGCTCCAGGACCAGCAGCTGGCCAGGCAGCTCATGCGCCTCCGAGGAGACATCAACAAGTTGAAGATCGAGCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS GCA 90 bp | TCAAAGGCGGCATCGTTGAGCATCCTCCGGTGCAGGCGGCAGGTCTaGTCGATCTTCAACTTGTTGATGTCTCCTCGGAGGCGCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SKAASLSILRCRRQV*SIFNLLMSPRRRMS Trigger: GCTCATGCGCCTCCGAGGAGACATCAACAAGTTGAAGATCGAGCAGACCTGCCGCCTGCACCGGAGGATGCTCAACGATGCCGCCTTTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS GCA 90 bp | TCCCGCTCCTCCAGCTCAAAGGCGGCATCGTTGAGCATCCTCCGGTaGAGGCGGCAGGTCTGCTCGATCTTCAACTTGTTGATGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRSSSSKAASLSILR*RRQVCSIFNLLMSP Trigger: AGGAGACATCAACAAGTTGAAGATCGAGCAGACCTGCCGCCTGCACCGGAGGATGCTCAACGATGCCGCCTTTGAGCTGGAGGAGCGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS CCA 90 bp | CTTCAGACTGAGGAGGTGGTCATCAGGAGGTACGGCTGCCCCGGCTaGCCTGTCTTTCTCACTCACTTCTTCCACTTGGATCTGGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LQTEEVVIRRYGCPG*PVFLTHFFHLDLGH Trigger: GTGCCCCAGATCCAAGTGGAAGAAGTGAGTGAGAAAGACAGGCCAGCCGGGGCAGCCGTACCTCCTGATGACCACCTCCTCAGTCTGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS GCA 90 bp | AGTGAGGGCCTTCAGACTGAGGAGGTGGTCATCAGGAGGTACGGCTaGCCCGGCTGGCCTGTCTTTCTCACTCACTTCTTCCACTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SEGLQTEEVVIRRYG*PGWPVFLTHFFHLD Trigger: ATCCAAGTGGAAGAAGTGAGTGAGAAAGACAGGCCAGCCGGGGCAGCCGTACCTCCTGATGACCACCTCCTCAGTCTGAAGGCCCTCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS GCA 90 bp | GGTGACGCCAATGAGCTTGAGTGGCATGGAAAGGCTGAAAGAGGATaGCAGCGGGGAGTCACAAAAGAGGTCGGACAGCTCATCCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GDANELEWHGKAERG*QRGVTKEVGQLIPL Trigger: GAGCGGGATGAGCTGTCCGACCTCTTTTGTGACTCCCCGCTGGCATCCTCTTTCAGCCTTTCCATGCCACTCAAGCTCATTGGCGTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS-3UTR CAA 90 bp | GCTAGGTGTTCTCCTGGGGTTGCGGGTGGCAGAGAGGTAACTGAAGTGGTTGTATCAAAGGCGGCATCGTaGAGCATCCTCCGGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ARCSPGVAGGREVTEVVVSKAAS*SILRCR Trigger: CCTGCACCGGAGGATGCTCAACGATGCCGCCTTTGA...TACAACCACTTCAGTTACCTCTCTGCCACCCGCAACCCCAGGAGAACACCTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCCCAGAGAACAAAAGCAGGAGGAAGATGCTGGGTGCTTTCCTATCTGAGCTGGAAGCCTTCCAGCTaGCCCGTGGTCAGTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FSQRTKAGGRCWVLSYLSWKPSS*PVVSGL Trigger: CAGGCCACTGACCACGGGCAAGCTGGAAGGCTTCCA...GCTCAGATAGGAAAGCACCCAGCATCTTCCTCCTGCTTTTGTTCTCTGGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
||
| CDS-3UTR CAA 90 bp | AAACAGCATGGCCTTGTGGCATCAAGGCTGAAGTTCAAAGTACCTGGGCAGAGCGTGACGCCAATGAGCTaGAGTGGCATGGAAAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: KQHGLVASRLKFKVPGQSVTPMS*SGMERL Trigger: CAGCCTTTCCATGCCACTCAAGCTCATTGGCGTCAC...GCTCTGCCCAGGTACTTTGAACTTCAGCCTTGATGCCACAAGGCCATGCTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS CCA 90 bp | CCTTCTGGAGTTGATGTTCATTTTGGTGACGCCAATGAGCTTGAGTaGCATGGAAAGGCTGAAAGAGGATGCCAGCGGGGAGTCACAAAA | + |
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Preference number: 5 (lower is better) Translates to: PSGVDVHFGDANELE*HGKAERGCQRGVTK Trigger: TTTTGTGACTCCCCGCTGGCATCCTCTTTCAGCCTTTCCATGCCACTCAAGCTCATTGGCGTCACCAAAATGAACATCAACTCCAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS-3UTR CAA 90 bp | TACATATGTCATATATCATATGCCATGGATCAAGCTAGAAACAGCATGGCCTTGGCTGGGCAGCTGGCCTaGGGAAAGGCCATGTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: YICHISYAMDQARNSMALAGQLA*GKAMSA Trigger: AGCAGACATGGCCTTTCCCAAGGCCAGCTGCCCAGC...CAAGGCCATGCTGTTTCTAGCTTGATCCATGGCATATGATATATGACATATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS-3UTR CAA 90 bp | AGCCTGCATTCCCACTTGTCATCTTGTTATTCCTTTAAGTTTTCCTGTCCTACCACTCACTTCTTCCACTaGGATCTGGGGCACAGACAT | + |
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Preference number: 5 (lower is better) Translates to: SLHSHLSSCYSFKFSCPTTHFFH*DLGHRH Trigger: ATGTCTGTGCCCCAGATCCAAGTGGAAGAAGTGAGT...GGTAGGACAGGAAAACTTAAAGGAATAACAAGATGACAAGTGGGAATGCAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS-3UTR CAA 90 bp | GGCAACTTGTGGGTTTGGCAGAGCATCAGTACCATCTTTTGGAGTTCAAGTTCAGAGTTGATGTTCATTTaGGTGACGCCAATGAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: GNLWVWQSISTIFWSSSSELMFI*VTPMSL Trigger: CAAGCTCATTGGCGTCACCAAAATGAACATCAACTC...TGAACTTGAACTCCAAAAGATGGTACTGATGCTCTGCCAAACCCACAAGTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS-3UTR CAA 90 bp | GTGTGGCCTACTCAACTGGTTTTCCATTTGGACAGGATTCAGACAGGTATTAACGAGAACCTTCTGGAGTaGATGTTCATTTTGGTGACG | + |
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Preference number: 5 (lower is better) Translates to: VWPTQLVFHLDRIQTGINENLLE*MFILVT Trigger: CGTCACCAAAATGAACATCAACTCCAGAAGGTTCTC...GTTAATACCTGTCTGAATCCTGTCCAAATGGAAAACCAGTTGAGTAGGCCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS TCA 72 bp | GCTCATCCCGCTCCTCCAGCTCAAAGGCGGCATCGTTaGGCATCCTCCGGTGCAGGCGGCAGGTCTGCTCGA | + |
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Preference number: 6 (lower is better) Translates to: AHPAPPAQRRHR*ASSGAGGRSAR Trigger: TCGAGCAGACCTGCCGCCTGCACCGGAGGATGCTCAACGATGCCGCCTTTGAGCTGGAGGAGCGGGATGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS CCA 72 bp | CGGAGGCGCATGAGCTGCCTGGCCAGCTGCTGGTCCTaGAGCCGCATCTCTGCCAGTTCCTTTCTGAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: RRRMSCLASCWS*SRISASSFLSQ Trigger: CTGGCTCAGAAAGGAACTGGCAGAGATGCGGCTCCAGGACCAGCAGCTGGCCAGGCAGCTCATGCGCCTCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS CAA 72 bp | AGCTCATCCCGCTCCTCCAGCTCAAAGGCGGCATCGTaGAGCATCCTCCGGTGCAGGCGGCAGGTCTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: SSSRSSSSKAAS*SILRCRRQVCS Trigger: CGAGCAGACCTGCCGCCTGCACCGGAGGATGCTCAACGATGCCGCCTTTGAGCTGGAGGAGCGGGATGAGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS CCA 72 bp | CTCAGCTTCTCAGTGAGGGCCTTCAGACTGAGGAGGTaGTCATCAGGAGGTACGGCTGCCCCGGCTGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LSFSVRAFRLRR*SSGGTAAPAGL Trigger: CAGGCCAGCCGGGGCAGCCGTACCTCCTGATGACCACCTCCTCAGTCTGAAGGCCCTCACTGAGAAGCTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS CCA 72 bp | CCCCCACATGCTCCCTGCTCCAGACTCGCCTCTTGCTaGGCAGCTGGCCTTGGGAAAGGCCATGTCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PPHAPCSRLASC*AAGLGKGHVCS Trigger: AGAGCAGACATGGCCTTTCCCAAGGCCAGCTGCCCAGCAAGAGGCGAGTCTGGAGCAGGGAGCATGTGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS CAA 72 bp | TCCACCCCCACATGCTCCCTGCTCCAGACTCGCCTCTaGCTGGGCAGCTGGCCTTGGGAAAGGCCATGTCTG | + |
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Preference number: 6 (lower is better) Translates to: STPTCSLLQTRL*LGSWPWERPCL Trigger: CAGACATGGCCTTTCCCAAGGCCAGCTGCCCAGCAAGAGGCGAGTCTGGAGCAGGGAGCATGTGGGGGTGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS CAA 90 bp | CAAAGGCTCTCCACCCCCACATGCTCCCTGCTCCAGACTCGCCTCTaGCTGGGCAGCTGGCCTTGGGAAAGGCCATGTCTGCTCTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: QRLSTPTCSLLQTRL*LGSWPWERPCLLFQ Trigger: CTGGAAGAGCAGACATGGCCTTTCCCAAGGCCAGCTGCCCAGCAAGAGGCGAGTCTGGAGCAGGGAGCATGTGGGGGTGGAGAGCCTTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS CAA 90 bp | AGCATCCTCCGGTGCAGGCGGCAGGTCTGCTCGATCTTCAACTTGTaGATGTCTCCTCGGAGGCGCATGAGCTGCCTGGCCAGCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SILRCRRQVCSIFNL*MSPRRRMSCLASCW Trigger: CCAGCAGCTGGCCAGGCAGCTCATGCGCCTCCGAGGAGACATCAACAAGTTGAAGATCGAGCAGACCTGCCGCCTGCACCGGAGGATGCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS CAA 90 bp | AGGTCGGACAGCTCATCCCGCTCCTCCAGCTCAAAGGCGGCATCGTaGAGCATCCTCCGGTGCAGGCGGCAGGTCTGCTCGATCTTCAAC | + |
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Preference number: 6 (lower is better) Translates to: RSDSSSRSSSSKAAS*SILRCRRQVCSIFN Trigger: GTTGAAGATCGAGCAGACCTGCCGCCTGCACCGGAGGATGCTCAACGATGCCGCCTTTGAGCTGGAGGAGCGGGATGAGCTGTCCGACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS CCA 72 bp | TGCTCCCTGCTCCAGACTCGCCTCTTGCTGGGCAGCTaGCCTTGGGAAAGGCCATGTCTGCTCTTCCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: CSLLQTRLLLGS*PWERPCLLFQP Trigger: AGGCTGGAAGAGCAGACATGGCCTTTCCCAAGGCCAGCTGCCCAGCAAGAGGCGAGTCTGGAGCAGGGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS CAA 72 bp | CGGTGCAGGCGGCAGGTCTGCTCGATCTTCAACTTGTaGATGTCTCCTCGGAGGCGCATGAGCTGCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RCRRQVCSIFNL*MSPRRRMSCLA Trigger: GGCCAGGCAGCTCATGCGCCTCCGAGGAGACATCAACAAGTTGAAGATCGAGCAGACCTGCCGCCTGCACCG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS CAA 90 bp | TTGAGCATCCTCCGGTGCAGGCGGCAGGTCTGCTCGATCTTCAACTaGTTGATGTCTCCTCGGAGGCGCATGAGCTGCCTGGCCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LSILRCRRQVCSIFN*LMSPRRRMSCLASC Trigger: GCAGCTGGCCAGGCAGCTCATGCGCCTCCGAGGAGACATCAACAAGTTGAAGATCGAGCAGACCTGCCGCCTGCACCGGAGGATGCTCAA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS CAA 72 bp | CTCCGGTGCAGGCGGCAGGTCTGCTCGATCTTCAACTaGTTGATGTCTCCTCGGAGGCGCATGAGCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LRCRRQVCSIFN*LMSPRRRMSCL Trigger: CAGGCAGCTCATGCGCCTCCGAGGAGACATCAACAAGTTGAAGATCGAGCAGACCTGCCGCCTGCACCGGAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS GCA 72 bp | TTCAACTTGTTGATGTCTCCTCGGAGGCGCATGAGCTaGCTGGCCAGCTGCTGGTCCTGGAGCCGCATCTCT | + |
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Preference number: 6 (lower is better) Translates to: FNLLMSPRRRMS*LASCWSWSRIS Trigger: AGAGATGCGGCTCCAGGACCAGCAGCTGGCCAGGCAGCTCATGCGCCTCCGAGGAGACATCAACAAGTTGAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS GCA 72 bp | GCATCGTTGAGCATCCTCCGGTGCAGGCGGCAGGTCTaGTCGATCTTCAACTTGTTGATGTCTCCTCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: ASLSILRCRRQV*SIFNLLMSPRR Trigger: CCTCCGAGGAGACATCAACAAGTTGAAGATCGAGCAGACCTGCCGCCTGCACCGGAGGATGCTCAACGATGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS GCA 72 bp | TCCAGCTCAAAGGCGGCATCGTTGAGCATCCTCCGGTaGAGGCGGCAGGTCTGCTCGATCTTCAACTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: SSSKAASLSILR*RRQVCSIFNLL Trigger: CAACAAGTTGAAGATCGAGCAGACCTGCCGCCTGCACCGGAGGATGCTCAACGATGCCGCCTTTGAGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS CAA 90 bp | GAGAACCTTCTGGAGTTGATGTTCATTTTGGTGACGCCAATGAGCTaGAGTGGCATGGAAAGGCTGAAAGAGGATGCCAGCGGGGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: ENLLELMFILVTPMS*SGMERLKEDASGES Trigger: TGACTCCCCGCTGGCATCCTCTTTCAGCCTTTCCATGCCACTCAAGCTCATTGGCGTCACCAAAATGAACATCAACTCCAGAAGGTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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| CDS CCA 72 bp | GTTGATGTTCATTTTGGTGACGCCAATGAGCTTGAGTaGCATGGAAAGGCTGAAAGAGGATGCCAGCGGGGA | + |
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Preference number: 6 (lower is better) Translates to: VDVHFGDANELE*HGKAERGCQRG Trigger: TCCCCGCTGGCATCCTCTTTCAGCCTTTCCATGCCACTCAAGCTCATTGGCGTCACCAAAATGAACATCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121288.2 |
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