Pregenerated sensors for FAM166A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026969Ensembl transcript IDs: ENSMUST00000028346.4
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | AGCCATGTCCACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATACTTGTGGCGGCCCCTaGGTGTCCACATCCTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: SHVHCAFAVLCPDITCTDTCGGP*VSTSWR Trigger: ACGCCAGGATGTGGACACCCAGGGGCCGCCACAAGT...ATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGACATGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR CCA 90 bp | ACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATACCACCATTATGGGTGTCCACATCCTaGCGTGGGAGCTGGCCTAGG | + |
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Preference number: 4 (lower is better) Translates to: TVHLLSCVLTSLVQIPPLWVSTS*RGSWPR Trigger: CCTAGGCCAGCTCCCACGCCAGGATGTGGACACCCA...TAATGGTGGTATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR CCA 90 bp | GCTAGCCATGTCCACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAACCCAGGGCACAGACTaGGTGTCTGAACACGAACTG | + |
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Preference number: 4 (lower is better) Translates to: ASHVHCAFAVLCPDITCTTQGTD*VSEHEL Trigger: CAGTTCGTGTTCAGACACCCAGTCTGTGCCCTGGGT...TGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGACATGGCTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR TCA 90 bp | CACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATACCACCATTTTCCCTGGGGTATCCTaGAGAGGTGCTGCATCCTTC | + |
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Preference number: 4 (lower is better) Translates to: HCAFAVLCPDITCTDTTIFPGVS*RGAASF Trigger: GAAGGATGCAGCACCTCTTCAGGATACCCCAGGGAA...AATGGTGGTATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR TCA 90 bp | ATGTCCACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATACCAGAAGCCGGCATAACCTaGGATGGCCTTGCGTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: MSTVHLLSCVLTSLVQIPEAGIT*DGLALD Trigger: ATCCAACGCAAGGCCATCTCAGGTTATGCCGGCTTC...TGGTATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR GCA 90 bp | AACTCTTTATTCATTCACAGCCTGTCTGCTAGCCATGTCCACTGTGCATTTGCTGCTCTCTCAGGTCCCTaGAGGGAATCCATGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: NSLFIHSLSASHVHCAFAALSGP*RESMVA Trigger: AGCCACCATGGATTCCCTGCAGGGACCTGAGAGAGC...AGCAAATGCACAGTGGACATGGCTAGCAGACAGGCTGTGAATGAATAAAGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR GCA 90 bp | TCTGCTAGCCATGTCCACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTGATAGGCTCTTCGGGTaGTGTTACCGAATGTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: SASHVHCAFAVLCPDITCDRLFG*CYRMSV Trigger: CACTGACATTCGGTAACAGCACCCGAAGAGCCTATC...ACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGACATGGCTAGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR CCA 90 bp | CACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATACCACCATTTGGATTAGGTTGGGGTaGTCTAGCTGGGGCAGTCGT | + |
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Preference number: 4 (lower is better) Translates to: HCAFAVLCPDITCTDTTIWIRLG*SSWGSR Trigger: ACGACTGCCCCAGCTAGACCACCCCAACCTAATCCA...AATGGTGGTATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR CCA 90 bp | CATGTCCACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATACCGAGATGGCCTTGCGTTaGATTAGGTTGGGGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: HVHCAFAVLCPDITCTDTEMALR*IRLGWS Trigger: AGACCACCCCAACCTAATCCAACGCAAGGCCATCTC...GGTATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR CCA 90 bp | AGCCATGTCCACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATATAGATGGTGGTGTTTaGCCAGTGGGTCCTAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SHVHCAFAVLCPDITCTDIDGGV*PVGPRQ Trigger: CTGCCTAGGACCCACTGGCCAAACACCACCATCTAT...ATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGACATGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR GCA 90 bp | CACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATACCACCATTATCTGTGAGCAACTGTaGAGTGGTGCGGCCATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HCAFAVLCPDITCTDTTIICEQL*SGAAIG Trigger: ACCTATGGCCGCACCACTGCACAGTTGCTCACAGAT...AATGGTGGTATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR GCA 90 bp | AGCCATGTCCACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATATAAGGCATGAAGCCTaGAGTCAGTGGTCCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHVHCAFAVLCPDITCTDIRHEA*SQWSLS Trigger: AGACAGGGACCACTGACTGCAGGCTTCATGCCTTAT...ATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGACATGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR CCA 90 bp | ATGTCCACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATACCAGGCTTCTATAGATGGTaGTGTTTGGCCAGTGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: MSTVHLLSCVLTSLVQIPGFYRW*CLASGS Trigger: GGACCCACTGGCCAAACACCACCATCTATAGAAGCC...TGGTATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| 3UTR CAA 72 bp | TTCACAGCCTGTCTGCTAGCCATGTCCACTGTGCATTaGCTGTCCTGTGTCCTGACATCACTTGTACAGATA | + |
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Preference number: 4 (lower is better) Translates to: FTACLLAMSTVH*LSCVLTSLVQI Trigger: TATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGACATGGCTAGCAGACAGGCTGTGAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR GCA 90 bp | ATGTCCACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATACCAATCCTGAAGAGGTGCTaGATCCTTCCAAGCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: MSTVHLLSCVLTSLVQIPILKRC*ILPSLF Trigger: GAAGAGGCTTGGAAGGATGCAGCACCTCTTCAGGAT...TGGTATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR GCA 90 bp | ACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATACCACCATTAGGTATCCTGAAGAGGTaGTGCATCCTTCCAAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: TVHLLSCVLTSLVQIPPLGILKR*CILPSL Trigger: GAGGCTTGGAAGGATGCAGCACCTCTTCAGGATACC...TAATGGTGGTATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR CCA 90 bp | ATGTCCACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATACCACGGCATAACCTGAGATaGCCTTGCGTTGGATTAGGT | + |
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Preference number: 4 (lower is better) Translates to: MSTVHLLSCVLTSLVQIPRHNLR*PCVGLG Trigger: ACCTAATCCAACGCAAGGCCATCTCAGGTTATGCCG...TGGTATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR GCA 90 bp | AACTCTTTATTCATTCACAGCCTGTCTGCTAGCCATGTCCACTGTGCATTTGCTGGTACTCATCCCTCCTaGAGTGGTATAGCTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSLFIHSLSASHVHCAFAGTHPS*SGIAGC Trigger: ACAACCAGCTATACCACTGCAGGAGGGATGAGTACC...AGCAAATGCACAGTGGACATGGCTAGCAGACAGGCTGTGAATGAATAAAGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR GCA 90 bp | AGCCATGTCCACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATGTTACCGAATGTCAGTaGATAGTTGTCCTGCATGGA | + |
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Preference number: 4 (lower is better) Translates to: SHVHCAFAVLCPDITCTDVTECQ*IVVLHG Trigger: TCCATGCAGGACAACTATGCACTGACATTCGGTAAC...ATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGACATGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR CCA 90 bp | ACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATACCACCATTACTGCAGTGGTATAGCTaGTTGTTCTTCCCTGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TVHLLSCVLTSLVQIPPLLQWYS*LFFPGV Trigger: TACCCCAGGGAAGAACAACCAGCTATACCACTGCAG...TAATGGTGGTATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR GCA 90 bp | ACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATACCACCATTAGCAGTCGTTGGAATCTaGCTACATCTAGTGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TVHLLSCVLTSLVQIPPLAVVGI*LHLVSP Trigger: AGGAGACACTAGATGTAGGCAGATTCCAACGACTGC...TAATGGTGGTATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR CCA 90 bp | AACTCTTTATTCATTCACAGCCTGTCTGCTAGCCATGTCCACTGTGCATTTGCTGATGTAGTGGGGTTCTaGAGTGAAGAGGTTGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: NSLFIHSLSASHVHCAFADVVGF*SEEVVF Trigger: AAACACAACCTCTTCACTCCAGAACCCCACTACATC...AGCAAATGCACAGTGGACATGGCTAGCAGACAGGCTGTGAATGAATAAAGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR CCA 90 bp | ACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATACCACCATTATGTAGGGTTTCAGACTaGTATAGTGGGGGATGTAAG | + |
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Preference number: 4 (lower is better) Translates to: TVHLLSCVLTSLVQIPPLCRVSD*YSGGCK Trigger: CTTACATCCCCCACTATACCAGTCTGAAACCCTACA...TAATGGTGGTATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS CCA 90 bp | GGGGCATGCCGGGTAGGGTGGATAAGGCATGAAGCCTGCAGTCAGTaGTCCCTGTCTGTTCTCTACTTGTGGCGGCCCCTGGGTGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: GACRVGWIRHEACSQ*SLSVLYLWRPLGVH Trigger: GTGGACACCCAGGGGCCGCCACAAGTAGAGAACAGACAGGGACCACTGACTGCAGGCTTCATGCCTTATCCACCCTACCCGGCATGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS CCA 90 bp | CATGTAGAAAGGAATCAGGCCTTGGCTTCTATAGATGGTGGTGTTTaGCCAGTGGGTCCTAGGCAGCCTTTCACCCAGGGCACAGACTGG | + |
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Preference number: 5 (lower is better) Translates to: HVERNQALASIDGGV*PVGPRQPFTQGTDW Trigger: CCAGTCTGTGCCCTGGGTGAAAGGCTGCCTAGGACCCACTGGCCAAACACCACCATCTATAGAAGCCAAGGCCTGATTCCTTTCTACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS CCA 90 bp | GGCAGCCTTTCACCCAGGGCACAGACTGGGTGTCTGAACACGAACTaGTTCTTGTCAAAGTCATCCATAGCTTGTGTGACACCATCACGG | + |
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Preference number: 5 (lower is better) Translates to: GSLSPRAQTGCLNTN*FLSKSSIACVTPSR Trigger: CCGTGATGGTGTCACACAAGCTATGGATGACTTTGACAAGAACCAGTTCGTGTTCAGACACCCAGTCTGTGCCCTGGGTGAAAGGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR CAA 90 bp | GCTAGCCATGTCCACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACACACCTGGTAGCGCAGTaGAGGATAGAAACCAGCATA | + |
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Preference number: 5 (lower is better) Translates to: ASHVHCAFAVLCPDITCTHLVAQ*RIETSI Trigger: TATGCTGGTTTCTATCCTCAACTGCGCTACCAGGTG...TGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGACATGGCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR CAA 90 bp | ACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATACCACCATTATTGCGTTGGATTAGGTaGGGGTGGTCTAGCTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: TVHLLSCVLTSLVQIPPLLRWIR*GWSSWG Trigger: GCCCCAGCTAGACCACCCCAACCTAATCCAACGCAA...TAATGGTGGTATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS GCA 90 bp | CAATTCCTTCTGATAGGCTCTTCGGGTGCTGTTACCGAATGTCAGTaGATAGTTGTCCTGCATGGATGGGATAAAGCCCATGTAGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: QFLLIGSSGAVTECQ*IVVLHGWDKAHVER Trigger: CCTTTCTACATGGGCTTTATCCCATCCATGCAGGACAACTATGCACTGACATTCGGTAACAGCACCCGAAGAGCCTATCAGAAGGAATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR CAA 90 bp | CATGTCCACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATACCCATGGTGGCTTGGATTaGCTGAAGTCCTCAATGAAC | + |
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Preference number: 5 (lower is better) Translates to: HVHCAFAVLCPDITCTDTHGGLD*LKSSMN Trigger: GTTCATTGAGGACTTCAGCAAATCCAAGCCACCATG...GGTATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTGGACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR CAA 90 bp | CACTGTGCATTTGCTGTCCTGTGTCCTGACATCACTTGTACAGATACCACCATTAAGTCCTCAATGAACTaGGGCTTGGTCATAGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: HCAFAVLCPDITCTDTTIKSSMN*GLVIGD Trigger: GTCACCTATGACCAAGCCCAAGTTCATTGAGGACTT...AATGGTGGTATCTGTACAAGTGATGTCAGGACACAGGACAGCAAATGCACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS-3UTR CAA 90 bp | ACTCTTTATTCATTCACAGCCTGTCTGCTAGCCATGTCCACTGTGCATTTGCTGGAAAGGAATCAGGCCTaGGCTTCTATAGATGGTGGT | + |
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Preference number: 5 (lower is better) Translates to: TLYSFTACLLAMSTVHLLERNQA*ASIDGG Trigger: ACCACCATCTATAGAAGCCAAGGCCTGATTCCTTTC...CAGCAAATGCACAGTGGACATGGCTAGCAGACAGGCTGTGAATGAATAAAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS CAA 72 bp | GAAGCCTGCAGTCAGTGGTCCCTGTCTGTTCTCTACTaGTGGCGGCCCCTGGGTGTCCACATCCTGGCGTGG | + |
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Preference number: 6 (lower is better) Translates to: EACSQWSLSVLY*WRPLGVHILAW Trigger: CCACGCCAGGATGTGGACACCCAGGGGCCGCCACAAGTAGAGAACAGACAGGGACCACTGACTGCAGGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS CAA 90 bp | ATAAGGCATGAAGCCTGCAGTCAGTGGTCCCTGTCTGTTCTCTACTaGTGGCGGCCCCTGGGTGTCCACATCCTGGCGTGGGAGCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: IRHEACSQWSLSVLY*WRPLGVHILAWELA Trigger: GGCCAGCTCCCACGCCAGGATGTGGACACCCAGGGGCCGCCACAAGTAGAGAACAGACAGGGACCACTGACTGCAGGCTTCATGCCTTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS CCA 72 bp | CGGGTAGGGTGGATAAGGCATGAAGCCTGCAGTCAGTaGTCCCTGTCTGTTCTCTACTTGTGGCGGCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: RVGWIRHEACSQ*SLSVLYLWRPL Trigger: CAGGGGCCGCCACAAGTAGAGAACAGACAGGGACCACTGACTGCAGGCTTCATGCCTTATCCACCCTACCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS CCA 72 bp | AGGCAAACCGGGGGACGAAGCCGGCATAACCTGAGATaGCCTTGCGTTGGATTAGGTTGGGGTGGTCTAGCT | + |
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Preference number: 6 (lower is better) Translates to: RQTGGRSRHNLR*PCVGLGWGGLA Trigger: AGCTAGACCACCCCAACCTAATCCAACGCAAGGCCATCTCAGGTTATGCCGGCTTCGTCCCCCGGTTTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS CCA 72 bp | GTGGGTCCTAGGCAGCCTTTCACCCAGGGCACAGACTaGGTGTCTGAACACGAACTGGTTCTTGTCAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: VGPRQPFTQGTD*VSEHELVLVKV Trigger: GACTTTGACAAGAACCAGTTCGTGTTCAGACACCCAGTCTGTGCCCTGGGTGAAAGGCTGCCTAGGACCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS TCA 72 bp | CAGTGGTATAGCTGGTTGTTCTTCCCTGGGGTATCCTaGAGAGGTGCTGCATCCTTCCAAGCCTCTTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: QWYSWLFFPGVS*RGAASFQASSP Trigger: TGGGGAAGAGGCTTGGAAGGATGCAGCACCTCTTCAGGATACCCCAGGGAAGAACAACCAGCTATACCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS CCA 72 bp | ATGGCCTTGCGTTGGATTAGGTTGGGGTGGTCTAGCTaGGGCAGTCGTTGGAATCTGCCTACATCTAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: MALRWIRLGWSS*GSRWNLPTSSV Trigger: GACACTAGATGTAGGCAGATTCCAACGACTGCCCCAGCTAGACCACCCCAACCTAATCCAACGCAAGGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS CAA 90 bp | GTCCTGCATGGATGGGATAAAGCCCATGTAGAAAGGAATCAGGCCTaGGCTTCTATAGATGGTGGTGTTTGGCCAGTGGGTCCTAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: VLHGWDKAHVERNQA*ASIDGGVWPVGPRQ Trigger: CTGCCTAGGACCCACTGGCCAAACACCACCATCTATAGAAGCCAAGGCCTGATTCCTTTCTACATGGGCTTTATCCCATCCATGCAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS GCA 72 bp | CTGATAGGCTCTTCGGGTGCTGTTACCGAATGTCAGTaGATAGTTGTCCTGCATGGATGGGATAAAGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: LIGSSGAVTECQ*IVVLHGWDKAH Trigger: ATGGGCTTTATCCCATCCATGCAGGACAACTATGCACTGACATTCGGTAACAGCACCCGAAGAGCCTATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS CCA 72 bp | TCACCCAGGGCACAGACTGGGTGTCTGAACACGAACTaGTTCTTGTCAAAGTCATCCATAGCTTGTGTGACA | + |
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Preference number: 6 (lower is better) Translates to: SPRAQTGCLNTN*FLSKSSIACVT Trigger: TGTCACACAAGCTATGGATGACTTTGACAAGAACCAGTTCGTGTTCAGACACCCAGTCTGTGCCCTGGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS CAA 72 bp | GGATGGGATAAAGCCCATGTAGAAAGGAATCAGGCCTaGGCTTCTATAGATGGTGGTGTTTGGCCAGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: GWDKAHVERNQA*ASIDGGVWPVG Trigger: ACCCACTGGCCAAACACCACCATCTATAGAAGCCAAGGCCTGATTCCTTTCTACATGGGCTTTATCCCATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS CAA 90 bp | TGGGTGTCTGAACACGAACTGGTTCTTGTCAAAGTCATCCATAGCTaGTGTGACACCATCACGGTAATTCATCCCCATTACCCAGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: WVSEHELVLVKVIHS*CDTITVIHPHYPGK Trigger: TTTGCCTGGGTAATGGGGATGAATTACCGTGATGGTGTCACACAAGCTATGGATGACTTTGACAAGAACCAGTTCGTGTTCAGACACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS CCA 72 bp | ATAGAAACCAGCATAACCAGGGATGTAGTGGGGTTCTaGAGTGAAGAGGTTGTGTTTCTGTGTAGCTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: IETSITRDVVGF*SEEVVFLCSCH Trigger: ATGACAGCTACACAGAAACACAACCTCTTCACTCCAGAACCCCACTACATCCCTGGTTATGCTGGTTTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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| CDS CAA 72 bp | GAACACGAACTGGTTCTTGTCAAAGTCATCCATAGCTaGTGTGACACCATCACGGTAATTCATCCCCATTAC | + |
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Preference number: 6 (lower is better) Translates to: EHELVLVKVIHS*CDTITVIHPHY Trigger: GTAATGGGGATGAATTACCGTGATGGTGTCACACAAGCTATGGATGACTTTGACAAGAACCAGTTCGTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028346.4 |
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