Pregenerated sensors for FAM163A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015484Ensembl transcript IDs: ENSMUST00000015628.4
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAGGGTTGCACATGGCCCAGGATGAGCAGATGGGCGGGACTGGGTaGACAACAACTGCAGAGCCATCCCTCTGCACCGGGGAGAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: KGLHMAQDEQMGGTG*TTTAEPSLCTGERG Trigger: CCCCCTCTCCCCGGTGCAGAGGGATGGCTCTGCAGTTGTTGTGCACCCAGTCCCGCCCATCTGCTCATCCTGGGCCATGTGCAACCCTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CCA 90 bp | TTGGTGGTGATGGATATGAGAGGAAGCCAGCCCCCACCCCAGGAATaGGCATCCGCACACCCTCAGAGGGCCGAGTCTATGTGGCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: LVVMDMRGSQPPPQE*ASAHPQRAESMWQG Trigger: GCCTTGCCACATAGACTCGGCCCTCTGAGGGTGTGCGGATGCCCATTCCTGGGGTGGGGGCTGGCTTCCTCTCATATCCATCACCACCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR TCA 90 bp | CTGCCAGGCCCAGCAGCAAATCAAAGGGTTGCACATGGCCCAGGATaGGCAGATGGGCGGGACTGGGTGCACAACAACTGCAGAGCCATC | + |
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Preference number: 1 (lower is better) Translates to: LPGPAANQRVAHGPG*ADGRDWVHNNCRAI Trigger: GATGGCTCTGCAGTTGTTGTGCACCCAGTCCCGCCCATCTGCTCATCCTGGGCCATGTGCAACCCTTTGATTTGCTGCTGGGCCTGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR GCA 90 bp | GAGGAAGTGGGGAAAGCTGCCAGGCCCAGCAGCAAATCAAAGGGTTaGACATGGCCCAGGATGAGCAGATGGGCGGGACTGGGTGCACAA | + |
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Preference number: 1 (lower is better) Translates to: EEVGKAARPSSKSKG*TWPRMSRWAGLGAQ Trigger: TTGTGCACCCAGTCCCGCCCATCTGCTCATCCTGGGCCATGTGCAACCCTTTGATTTGCTGCTGGGCCTGGCAGCTTTCCCCACTTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CCA 90 bp | GTGGGGAAAGCTGCCAGGCCCAGCAGCAAATCAAAGGGTTGCACATaGCCCAGGATGAGCAGATGGGCGGGACTGGGTGCACAACAACTG | + |
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Preference number: 1 (lower is better) Translates to: VGKAARPSSKSKGCT*PRMSRWAGLGAQQL Trigger: CAGTTGTTGTGCACCCAGTCCCGCCCATCTGCTCATCCTGGGCCATGTGCAACCCTTTGATTTGCTGCTGGGCCTGGCAGCTTTCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CCA 90 bp | CAGAGAGAAACTGGTGACATTGCAGACCTATCAGGTCCCTACCTCTaGGCCACAGGGCTGGCGACAGGTCCTGCCCTGGTCCTCAAGCAT | + |
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Preference number: 1 (lower is better) Translates to: QRETGDIADLSGPYL*ATGLATGPALVLKH Trigger: ATGCTTGAGGACCAGGGCAGGACCTGTCGCCAGCCCTGTGGCCCAGAGGTAGGGACCTGATAGGTCTGCAATGTCACCAGTTTCTCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CCA 90 bp | CTGGAAGCCAGAGAAACTGAAATGGTTTCTGGGGGAGAGGGCGATTaGAGAGTCCCCTCCAACACTCCATTGCTCCTGCTGGGACCGCAG | + |
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Preference number: 1 (lower is better) Translates to: LEARETEMVSGGEGD*RVPSNTPLLLLGPQ Trigger: CTGCGGTCCCAGCAGGAGCAATGGAGTGTTGGAGGGGACTCTCCAATCGCCCTCTCCCCCAGAAACCATTTCAGTTTCTCTGGCTTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CCA 90 bp | GTGACATTGCAGACCTATCAGGTCCCTACCTCTGGGCCACAGGGCTaGCGACAGGTCCTGCCCTGGTCCTCAAGCATTTACTTGTACACA | + |
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Preference number: 1 (lower is better) Translates to: VTLQTYQVPTSGPQG*RQVLPWSSSIYLYT Trigger: TGTGTACAAGTAAATGCTTGAGGACCAGGGCAGGACCTGTCGCCAGCCCTGTGGCCCAGAGGTAGGGACCTGATAGGTCTGCAATGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR GCA 90 bp | GGGAACTTAACTGTGGCACCATTGCCTCAGTTCCCTCCTTCTGGTTaGCATGGAGACTGGCCACTTGAATTGCCTCTGGGTCCAGTTGCT | + |
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Preference number: 1 (lower is better) Translates to: GNLTVAPLPQFPPSG*HGDWPLELPLGPVA Trigger: AGCAACTGGACCCAGAGGCAATTCAAGTGGCCAGTCTCCATGGCAACCAGAAGGAGGGAACTGAGGCAATGGTGCCACAGTTAAGTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CCA 90 bp | GTGGCACCATTGCCTCAGTTCCCTCCTTCTGGTTGCCATGGAGACTaGCCACTTGAATTGCCTCTGGGTCCAGTTGCTAAAGGGTCAGAT | + |
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Preference number: 1 (lower is better) Translates to: VAPLPQFPPSGCHGD*PLELPLGPVAKGSD Trigger: ATCTGACCCTTTAGCAACTGGACCCAGAGGCAATTCAAGTGGCCAGTCTCCATGGCAACCAGAAGGAGGGAACTGAGGCAATGGTGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR TCA 90 bp | ATGGAAGATGCTCATGATGCTACAGTGAAGAGTGAGGGGGTCAGGTaGCCTGTAGCCAAGGGTGGAACCTGTGCCTTGAACAATGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: MEDAHDATVKSEGVR*PVAKGGTCALNNVG Trigger: GCCCACATTGTTCAAGGCACAGGTTCCACCCTTGGCTACAGGTCACCTGACCCCCTCACTCTTCACTGTAGCATCATGAGCATCTTCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR GCA 90 bp | CCCGTCCCCTCTGACACCTGGGATCCAGATTTTGAATTGTGGCCCTaGTGGAGACACAAAGGCAAAGAGTGCTTTATACCCAGAGCCCAT | + |
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Preference number: 1 (lower is better) Translates to: PVPSDTWDPDFELWP*WRHKGKECFIPRAH Trigger: ATGGGCTCTGGGTATAAAGCACTCTTTGCCTTTGTGTCTCCAGCAGGGCCACAATTCAAAATCTGGATCCCAGGTGTCAGAGGGGACGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR GCA 90 bp | CTGCCCACCTCATCTCCCAAGGTCTCTGGAAGCCTCCCTAACCTTTaGTTAGCTTTCCCTGGTCTTTACACAACCCATCAAAGCAAAGGG | + |
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Preference number: 1 (lower is better) Translates to: LPTSSPKVSGSLPNL*LAFPGLYTTHQSKG Trigger: CCCTTTGCTTTGATGGGTTGTGTAAAGACCAGGGAAAGCTAAGCAAAGGTTAGGGAGGCTTCCAGAGACCTTGGGAGATGAGGTGGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR GCA 90 bp | CTCAGTTCCCTCCTTCTGGTTGCCATGGAGACTGGCCACTTGAATTaGCTCTGGGTCCAGTTGCTAAAGGGTCAGATTTTTCTTACTTGT | + |
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Preference number: 1 (lower is better) Translates to: LSSLLLVAMETGHLN*LWVQLLKGQIFLTC Trigger: ACAAGTAAGAAAAATCTGACCCTTTAGCAACTGGACCCAGAGGCAATTCAAGTGGCCAGTCTCCATGGCAACCAGAAGGAGGGAACTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR GCA 90 bp | ATAAGAAAGGACTTGAAGGGGAGACAAGGTTATATAGCCTCTTCTTaGTACAGTCCCCATAAGCAGTCGTGTGTTGTGGCGCTTAGCATC | + |
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Preference number: 1 (lower is better) Translates to: IRKDLKGRQGYIASS*YSPHKQSCVVALSI Trigger: GATGCTAAGCGCCACAACACACGACTGCTTATGGGGACTGTAGCAAGAAGAGGCTATATAACCTTGTCTCCCCTTCAAGTCCTTTCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CCA 90 bp | GGTCCTCAAGCATTTACTTGTACACATCTTACTGTACCTCTGATCTaGAAGCCAGAGAAACTGAAATGGTTTCTGGGGGAGAGGGCGATT | + |
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Preference number: 1 (lower is better) Translates to: GPQAFTCTHLTVPLI*KPEKLKWFLGERAI Trigger: AATCGCCCTCTCCCCCAGAAACCATTTCAGTTTCTCTGGCTTCCAGATCAGAGGTACAGTAAGATGTGTACAAGTAAATGCTTGAGGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR-3UTR CCA 90 bp | GGGTGCACAACAACTGCAGAGCCATCCCTCTGCACCGGGGAGAGGGGGAGGTTATCAGGTCCCTACCTCTaGGCCACAGGGCTGGCGACA | + |
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Preference number: 2 (lower is better) Translates to: GCTTTAEPSLCTGERGRLSGPYL*ATGLAT Trigger: TGTCGCCAGCCCTGTGGCCCAGAGGTAGGGACCTGA...TAACCTCCCCCTCTCCCCGGTGCAGAGGGATGGCTCTGCAGTTGTTGTGCACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 90 bp | AGAGGAAGTGGGGAAAGCTGCCAGGCCCAGCAGCAAATCAAAGGGTaGCACATGGCCCAGGATGAGCAGATGGGCGGGACTGGGTGCACA | + |
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Preference number: 2 (lower is better) Translates to: RGSGESCQAQQQIKG*HMAQDEQMGGTGCT Trigger: TGTGCACCCAGTCCCGCCCATCTGCTCATCCTGGGCCATGTGCAACCCTTTGATTTGCTGCTGGGCCTGGCAGCTTTCCCCACTTCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR-3UTR TCA 90 bp | CTATCAGGTCCCTACCTCTGGGCCACAGGGCTGGCGACAGGTCCTGCCCTGGTCGGAAGCCAGAGAAACTaGAATGGTTTCTGGGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LSGPYLWATGLATGPALVGSQRN*NGFWGR Trigger: TCTCCCCCAGAAACCATTTCAGTTTCTCTGGCTTCC...GACCAGGGCAGGACCTGTCGCCAGCCCTGTGGCCCAGAGGTAGGGACCTGATAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 90 bp | CCTTTCTGCTCTGCAGCTCCCGAAGGAGGCAAAGCCACATGGCTGTaGGTGGTGATGGATATGAGAGGAAGCCAGCCCCCACCCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: PFCSAAPEGGKATWL*VVMDMRGSQPPPQE Trigger: TTCCTGGGGTGGGGGCTGGCTTCCTCTCATATCCATCACCACCAACAGCCATGTGGCTTTGCCTCCTTCGGGAGCTGCAGAGCAGAAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR-3UTR CCA 90 bp | TGTGGAGAAGGATGGTGGAGAGGGCTGGCTATTCCCCGGGCCTCCCTTCTCTGCAAGGCCACTGCTAGATaGAAAGTGGGAGGTGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: CGEGWWRGLAIPRASLLCKATAR*KVGGVG Trigger: CCCAACACCTCCCACTTTCCATCTAGCAGTGGCCTT...GCAGAGAAGGGAGGCCCGGGGAATAGCCAGCCCTCTCCACCATCCTTCTCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR-3UTR CCA 90 bp | TGTGGAGAAGGATGGTGGAGAGGGCTGGCTATTCCCCGGGCCTCCCTTCTCTGCACCTGTAGCCAAGGGTaGAACCTGTGCCTTGAACAA | + |
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Preference number: 2 (lower is better) Translates to: CGEGWWRGLAIPRASLLCTCSQG*NLCLEQ Trigger: TTGTTCAAGGCACAGGTTCCACCCTTGGCTACAGGT...GCAGAGAAGGGAGGCCCGGGGAATAGCCAGCCCTCTCCACCATCCTTCTCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR-3UTR GCA 90 bp | CCCGAAGGAGGCAAAGCCACATGGCTGTTGGTGGTGATGGATATGAGAGGAAGCCCTCCAACACTCCATTaGTCCTGCTGGGACCGCAGT | + |
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Preference number: 2 (lower is better) Translates to: PEGGKATWLLVVMDMRGSPPTLH*SCWDRS Trigger: ACTGCGGTCCCAGCAGGAGCAATGGAGTGTTGGAGG...GCTTCCTCTCATATCCATCACCACCAACAGCCATGTGGCTTTGCCTCCTTCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR-3UTR CCA 90 bp | AGAGGGCCGAGTCTATGTGGCAAGGCATGGAGGGATGGGGCGAATCAATGTGATCTGGGACCGCAGTGTTaGGTGTGTGCAGATTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: RGPSLCGKAWRDGANQCDLGPQC*VCADWG Trigger: ACCCCAATCTGCACACACCCAACACTGCGGTCCCAG...ATCACATTGATTCGCCCCATCCCTCCATGCCTTGCCACATAGACTCGGCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR-3UTR CCA 90 bp | TGTGGAGAAGGATGGTGGAGAGGGCTGGCTATTCCCCGGGCCTCCCTTCTCTGCCTGCTAGATGGAAAGTaGGAGGTGTTGGGATCTGAA | + |
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Preference number: 2 (lower is better) Translates to: CGEGWWRGLAIPRASLLCLLDGK*EVLGSE Trigger: TTCAGATCCCAACACCTCCCACTTTCCATCTAGCAG...GCAGAGAAGGGAGGCCCGGGGAATAGCCAGCCCTCTCCACCATCCTTCTCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR-3UTR CCA 90 bp | GGTACGATGGCATTGTTATCTAGGGTGAAGCTGTGGGACCACAGGAGAGCAAGGCACCCAGCCCTGGCCTaGATGAAGGCAAGAGACGAG | + |
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Preference number: 2 (lower is better) Translates to: GTMALLSRVKLWDHRRARHPALA*MKARDE Trigger: CTCGTCTCTTGCCTTCATCCAGGCCAGGGCTGGGTG...CCTTGCTCTCCTGTGGTCCCACAGCTTCACCCTAGATAACAATGCCATCGTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR-3UTR CCA 90 bp | TGTGGAGAAGGATGGTGGAGAGGGCTGGCTATTCCCCGGGCCTCCCTTCTCTGCGTCCCCTCTGACACCTaGGATCCAGATTTTGAATTG | + |
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Preference number: 2 (lower is better) Translates to: CGEGWWRGLAIPRASLLCVPSDT*DPDFEL Trigger: CAATTCAAAATCTGGATCCCAGGTGTCAGAGGGGAC...GCAGAGAAGGGAGGCCCGGGGAATAGCCAGCCCTCTCCACCATCCTTCTCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR-3UTR GCA 90 bp | GGTACGATGGCATTGTTATCTAGGGTGAAGCTGTGGGACCACAGGAGAGCAAGGGCTGGCGACAGGTCCTaGCCTGGTCCTCAAGCATTT | + |
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Preference number: 2 (lower is better) Translates to: GTMALLSRVKLWDHRRARAGDRS*PGPQAF Trigger: AAATGCTTGAGGACCAGGGCAGGACCTGTCGCCAGC...CCTTGCTCTCCTGTGGTCCCACAGCTTCACCCTAGATAACAATGCCATCGTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR-3UTR CCA 90 bp | ATTCCCCGGGCCTCCCTTCTCTGCCTGTTTAGGGTTCAGTTTGAAGAGTGGACAAGGAGAGCAAGGCACTaGGCTGGTAGAGAGGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: IPRASLLCLFRVQFEEWTRRARH*AGREEV Trigger: CACTTCCTCTCTACCAGCCCAGTGCCTTGCTCTCCT...TGTCCACTCTTCAAACTGAACCCTAAACAGGCAGAGAAGGGAGGCCCGGGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 90 bp | CCACAGGGCTGGCGACAGGTCCTGCCCTGGTCCTCAAGCATTTACTaGTACACATCTTACTGTACCTCTGATCTGGAAGCCAGAGAAACT | + |
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Preference number: 2 (lower is better) Translates to: PQGWRQVLPWSSSIY*YTSYCTSDLEARET Trigger: AGTTTCTCTGGCTTCCAGATCAGAGGTACAGTAAGATGTGTACAAGTAAATGCTTGAGGACCAGGGCAGGACCTGTCGCCAGCCCTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 90 bp | CTTTCCTCTCTCCTCTCAAGCTCTGGGATGTCTAAGCCTCACCCTTaGTGTCCGTTTCTTTTAGGTCTGCCCACCTCATCTCCCAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LSSLLSSSGMSKPHP*CPFLLGLPTSSPKV Trigger: GACCTTGGGAGATGAGGTGGGCAGACCTAAAAGAAACGGACACAAAGGGTGAGGCTTAGACATCCCAGAGCTTGAGAGGAGAGAGGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 90 bp | GGCAGTGTGTATTCCCCGTCCCCTCTGACACCTGGGATCCAGATTTaGAATTGTGGCCCTGCTGGAGACACAAAGGCAAAGAGTGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: GSVYSPSPLTPGIQI*NCGPAGDTKAKSAL Trigger: TAAAGCACTCTTTGCCTTTGTGTCTCCAGCAGGGCCACAATTCAAAATCTGGATCCCAGGTGTCAGAGGGGACGGGGAATACACACTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR-3UTR CCA 90 bp | GTCTCCTGCTTCTTAACCCTGTGTTCATTATTTACAGTTGGACATGTAAGATGCTCTGGGCCACAGGGCTaGCGACAGGTCCTGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: VSCFLTLCSLFTVGHVRCSGPQG*RQVLPW Trigger: CCAGGGCAGGACCTGTCGCCAGCCCTGTGGCCCAGA...GCATCTTACATGTCCAACTGTAAATAATGAACACAGGGTTAAGAAGCAGGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR-3UTR CCA 90 bp | AGAGGGCCGAGTCTATGTGGCAAGGCATGGAGGGATGGGGCGAATCAATGTGATTCAAAGCAAAGGGCTTaGGGCTTATTGGAAGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: RGPSLCGKAWRDGANQCDSKQRA*GLLEGV Trigger: GACACCTTCCAATAAGCCCCAAGCCCTTTGCTTTGA...ATCACATTGATTCGCCCCATCCCTCCATGCCTTGCCACATAGACTCGGCCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 90 bp | TTGCCTCTGGGTCCAGTTGCTAAAGGGTCAGATTTTTCTTACTTGTaGGTCCCTTGGACCTTTCTGCTCTGCAGCTCCCGAAGGAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: LPLGPVAKGSDFSYL*VPWTFLLCSSRRRQ Trigger: TTGCCTCCTTCGGGAGCTGCAGAGCAGAAAGGTCCAAGGGACCAACAAGTAAGAAAAATCTGACCCTTTAGCAACTGGACCCAGAGGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 90 bp | GAATTGCCTCTGGGTCCAGTTGCTAAAGGGTCAGATTTTTCTTACTaGTTGGTCCCTTGGACCTTTCTGCTCTGCAGCTCCCGAAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: ELPLGPVAKGSDFSY*LVPWTFLLCSSRRR Trigger: CCTCCTTCGGGAGCTGCAGAGCAGAAAGGTCCAAGGGACCAACAAGTAAGAAAAATCTGACCCTTTAGCAACTGGACCCAGAGGCAATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR-3UTR GCA 90 bp | GGTACGATGGCATTGTTATCTAGGGTGAAGCTGTGGGACCACAGGAGAGCAAGGAGACTTGAGGTTTTGTaGAGACCTGGCAAGAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: GTMALLSRVKLWDHRRARRLEVL*RPGKSS Trigger: AGAGCTCTTGCCAGGTCTGCACAAAACCTCAAGTCT...CCTTGCTCTCCTGTGGTCCCACAGCTTCACCCTAGATAACAATGCCATCGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR-3UTR CCA 90 bp | ATTCCCCGGGCCTCCCTTCTCTGCCTGTTTAGGGTTCAGTTTGAAGAGTGGACACCTCTTCCCCAAGGATaGAAGATGCTCATGATGCTA | + |
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Preference number: 2 (lower is better) Translates to: IPRASLLCLFRVQFEEWTPLPQG*KMLMML Trigger: TAGCATCATGAGCATCTTCCATCCTTGGGGAAGAGG...TGTCCACTCTTCAAACTGAACCCTAAACAGGCAGAGAAGGGAGGCCCGGGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 90 bp | CTGGTTGCCATGGAGACTGGCCACTTGAATTGCCTCTGGGTCCAGTaGCTAAAGGGTCAGATTTTTCTTACTTGTTGGTCCCTTGGACCT | + |
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Preference number: 2 (lower is better) Translates to: LVAMETGHLNCLWVQ*LKGQIFLTCWSLGP Trigger: AGGTCCAAGGGACCAACAAGTAAGAAAAATCTGACCCTTTAGCAACTGGACCCAGAGGCAATTCAAGTGGCCAGTCTCCATGGCAACCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 90 bp | TGGCTATTCCCCGGGCCTCCCTTCTCTGCCTGTTTAGGGTTCAGTTaGAAGAGTGGACAAATTGTATCTCATGGTACAGACTCAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: WLFPGPPFSACLGFS*KSGQIVSHGTDSAA Trigger: AGCTGCTGAGTCTGTACCATGAGATACAATTTGTCCACTCTTCAAACTGAACCCTAAACAGGCAGAGAAGGGAGGCCCGGGGAATAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR-3UTR CCA 90 bp | CCCGAAGGAGGCAAAGCCACATGGCTGTTGGTGGTGATGGATATGAGAGGAAGCACTGTACCTCTGATCTaGAAGCCAGAGAAACTGAAA | + |
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Preference number: 2 (lower is better) Translates to: PEGGKATWLLVVMDMRGSTVPLI*KPEKLK Trigger: TTTCAGTTTCTCTGGCTTCCAGATCAGAGGTACAGT...GCTTCCTCTCATATCCATCACCACCAACAGCCATGTGGCTTTGCCTCCTTCGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR-3UTR CCA 90 bp | ATTCCCCGGGCCTCCCTTCTCTGCCTGTTTAGGGTTCAGTTTGAAGAGTGGACACCAGCACCCCTTTTGTaGTTTCTAACCCACAACAAA | + |
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Preference number: 2 (lower is better) Translates to: IPRASLLCLFRVQFEEWTPAPLL*FLTHNK Trigger: TTTGTTGTGGGTTAGAAACCACAAAAGGGGTGCTGG...TGTCCACTCTTCAAACTGAACCCTAAACAGGCAGAGAAGGGAGGCCCGGGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR-3UTR GCA 90 bp | ATTCCCCGGGCCTCCCTTCTCTGCCTGTTTAGGGTTCAGTTTGAAGAGTGGACATTGGCTTTTATGCAGTaGTGGAGACTTGAGGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: IPRASLLCLFRVQFEEWTLAFMQ*WRLEVL Trigger: CAAAACCTCAAGTCTCCAGCACTGCATAAAAGCCAA...TGTCCACTCTTCAAACTGAACCCTAAACAGGCAGAGAAGGGAGGCCCGGGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR-3UTR CCA 90 bp | CCCGAAGGAGGCAAAGCCACATGGCTGTTGGTGGTGATGGATATGAGAGGAAGCATAATGACTGACACCTaGAAAAGTTTCTCTAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PEGGKATWLLVVMDMRGSIMTDT*KSFSSR Trigger: CCTGCTAGAGAAACTTTTCCAGGTGTCAGTCATTAT...GCTTCCTCTCATATCCATCACCACCAACAGCCATGTGGCTTTGCCTCCTTCGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 90 bp | GAGGTTAGCTCTCCTGCTGAGGCTCCCAGAGGCAGTACTTGCCTTTaGAGGTTGCTCAGTAGGGGGTTGAACAAATGTTTTTGTTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: EVSSPAEAPRGSTCL*RLLSRGLNKCFCCF Trigger: AAAACAACAAAAACATTTGTTCAACCCCCTACTGAGCAACCTCAAAAGGCAAGTACTGCCTCTGGGAGCCTCAGCAGGAGAGCTAACCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR-3UTR CCA 90 bp | GAGGCAAGCATAATATCTAATTACAAAGACACAGCCAACCTTCAGGAGATCCCCCGACAGGTCCTGCCCTaGTCCTCAAGCATTTACTTG | + |
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Preference number: 2 (lower is better) Translates to: EASIISNYKDTANLQEIPRQVLP*SSSIYL Trigger: CAAGTAAATGCTTGAGGACCAGGGCAGGACCTGTCG...GGGGATCTCCTGAAGGTTGGCTGTGTCTTTGTAATTAGATATTATGCTTGCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR-3UTR CCA 90 bp | GAGGCAAGCATAATATCTAATTACAAAGACACAGCCAACCTTCAGGAGATCCCCGGTTGCCATGGAGACTaGCCACTTGAATTGCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: EASIISNYKDTANLQEIPGCHGD*PLELPL Trigger: CAGAGGCAATTCAAGTGGCCAGTCTCCATGGCAACC...GGGGATCTCCTGAAGGTTGGCTGTGTCTTTGTAATTAGATATTATGCTTGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR CAA 90 bp | ATAGAGGTGTACCCACCAAGTTGGCTTTTATGCAGTGCTGGAGACTaGAGGTTTTGTGCAGACCTGGCAAGAGCTCTATCAACTGAACTA | + |
|
Preference number: 2 (lower is better) Translates to: IEVYPPSWLLCSAGD*RFCADLARALSTEL Trigger: TAGTTCAGTTGATAGAGCTCTTGCCAGGTCTGCACAAAACCTCAAGTCTCCAGCACTGCATAAAAGCCAACTTGGTGGGTACACCTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR CCA 72 bp | ACTGGTGACATTGCAGACCTATCAGGTCCCTACCTCTaGGCCACAGGGCTGGCGACAGGTCCTGCCCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: TGDIADLSGPYL*ATGLATGPALV Trigger: GACCAGGGCAGGACCTGTCGCCAGCCCTGTGGCCCAGAGGTAGGGACCTGATAGGTCTGCAATGTCACCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR CCA 72 bp | GCTGCCAGGCCCAGCAGCAAATCAAAGGGTTGCACATaGCCCAGGATGAGCAGATGGGCGGGACTGGGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: AARPSSKSKGCT*PRMSRWAGLGA Trigger: TGCACCCAGTCCCGCCCATCTGCTCATCCTGGGCCATGTGCAACCCTTTGATTTGCTGCTGGGCCTGGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR CCA 72 bp | CAGACCTATCAGGTCCCTACCTCTGGGCCACAGGGCTaGCGACAGGTCCTGCCCTGGTCCTCAAGCATTTAC | + |
|
Preference number: 3 (lower is better) Translates to: QTYQVPTSGPQG*RQVLPWSSSIY Trigger: GTAAATGCTTGAGGACCAGGGCAGGACCTGTCGCCAGCCCTGTGGCCCAGAGGTAGGGACCTGATAGGTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR-3UTR CAA 90 bp | GGGTGCACAACAACTGCAGAGCCATCCCTCTGCACCGGGGAGAGGGGGAGGTTATGGGGACAGCGATCCTaGAATCACGGAGGTAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: GCTTTAEPSLCTGERGRLWGQRS*NHGGNW Trigger: CCAGTTACCTCCGTGATTCAAGGATCGCTGTCCCCA...TAACCTCCCCCTCTCCCCGGTGCAGAGGGATGGCTCTGCAGTTGTTGTGCACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR-3UTR CAA 90 bp | CCCGAAGGAGGCAAAGCCACATGGCTGTTGGTGGTGATGGATATGAGAGGAAGCCCCTCCAACACTCCATaGCTCCTGCTGGGACCGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PEGGKATWLLVVMDMRGSPSNTP*LLLGPQ Trigger: CTGCGGTCCCAGCAGGAGCAATGGAGTGTTGGAGGG...GCTTCCTCTCATATCCATCACCACCAACAGCCATGTGGCTTTGCCTCCTTCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR-3UTR CAA 90 bp | TGTGGAGAAGGATGGTGGAGAGGGCTGGCTATTCCCCGGGCCTCCCTTCTCTGCCAGCAAATCAAAGGGTaGCACATGGCCCAGGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: CGEGWWRGLAIPRASLLCQQIKG*HMAQDE Trigger: CTCATCCTGGGCCATGTGCAACCCTTTGATTTGCTG...GCAGAGAAGGGAGGCCCGGGGAATAGCCAGCCCTCTCCACCATCCTTCTCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTGCACATGGCCCAGGATGAGCAGATGGGCGGGACTGGGTGCACAACAACTTTACTTGTTGGTCCCTaGGACCTTTCTGCTCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GLHMAQDEQMGGTGCTTTLLVGP*DLSALQ Trigger: CTGCAGAGCAGAAAGGTCCAAGGGACCAACAAGTAA...AGTTGTTGTGCACCCAGTCCCGCCCATCTGCTCATCCTGGGCCATGTGCAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR TCA 72 bp | CCCAGCCCTGGCCTGGATGAAGGCAAGAGACGAGGCTaGGGAGCAGGTCTAAGACGTCTCAGATTTGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PSPGLDEGKRRG*GAGLRRLRFVE Trigger: TTCCACAAATCTGAGACGTCTTAGACCTGCTCCTCAGCCTCGTCTCTTGCCTTCATCCAGGCCAGGGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR GCA 72 bp | TCCCTACCTCTGGGCCACAGGGCTGGCGACAGGTCCTaGCCTGGTCCTCAAGCATTTACTTGTACACATCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLPLGHRAGDRS*PGPQAFTCTHL Trigger: AAGATGTGTACAAGTAAATGCTTGAGGACCAGGGCAGGACCTGTCGCCAGCCCTGTGGCCCAGAGGTAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR GCA 72 bp | ACTGTGGCACCATTGCCTCAGTTCCCTCCTTCTGGTTaGCATGGAGACTGGCCACTTGAATTGCCTCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TVAPLPQFPPSG*HGDWPLELPLG Trigger: ACCCAGAGGCAATTCAAGTGGCCAGTCTCCATGGCAACCAGAAGGAGGGAACTGAGGCAATGGTGCCACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR CCA 72 bp | ACCTCTGGGCCACAGGGCTGGCGACAGGTCCTGCCCTaGTCCTCAAGCATTTACTTGTACACATCTTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: TSGPQGWRQVLP*SSSIYLYTSYC Trigger: ACAGTAAGATGTGTACAAGTAAATGCTTGAGGACCAGGGCAGGACCTGTCGCCAGCCCTGTGGCCCAGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR CCA 72 bp | AGAGAAACTGAAATGGTTTCTGGGGGAGAGGGCGATTaGAGAGTCCCCTCCAACACTCCATTGCTCCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RETEMVSGGEGD*RVPSNTPLLLL Trigger: CAGCAGGAGCAATGGAGTGTTGGAGGGGACTCTCCAATCGCCCTCTCCCCCAGAAACCATTTCAGTTTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR CCA 72 bp | CACACCCTCAGAGGGCCGAGTCTATGTGGCAAGGCATaGAGGGATGGGGCGAATCAATGTGATCTATCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: HTLRGPSLCGKA*RDGANQCDLSV Trigger: AACAGATAGATCACATTGATTCGCCCCATCCCTCCATGCCTTGCCACATAGACTCGGCCCTCTGAGGGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR CCA 72 bp | ATGGGTACGATGGCATTGTTATCTAGGGTGAAGCTGTaGGACCACAGGAGAGCAAGGCACTGGGCTGGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: MGTMALLSRVKL*DHRRARHWAGR Trigger: TCTACCAGCCCAGTGCCTTGCTCTCCTGTGGTCCCACAGCTTCACCCTAGATAACAATGCCATCGTACCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR GCA 72 bp | GTTAGCTCTCCTGCTGAGGCTCCCAGAGGCAGTACTTaGCTTTTGAGGTTGCTCAGTAGGGGGTTGAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: VSSPAEAPRGST*LLRLLSRGLNK Trigger: TTTGTTCAACCCCCTACTGAGCAACCTCAAAAGGCAAGTACTGCCTCTGGGAGCCTCAGCAGGAGAGCTAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR CCA 72 bp | TTGCCTCAGTTCCCTCCTTCTGGTTGCCATGGAGACTaGCCACTTGAATTGCCTCTGGGTCCAGTTGCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LPQFPPSGCHGD*PLELPLGPVAK Trigger: TTTAGCAACTGGACCCAGAGGCAATTCAAGTGGCCAGTCTCCATGGCAACCAGAAGGAGGGAACTGAGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGGCCGAGTCTATGTGGCAAGGCATGGAGGGATGGGGCGAATCAATGTGATGCGCTTAGCATCAGTTaGATGTGTTTCATGAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RGPSLCGKAWRDGANQCDALSIS*MCFMRR Trigger: CCTCCTCATGAAACACATCAAACTGATGCTAAGCGC...ATCACATTGATTCGCCCCATCCCTCCATGCCTTGCCACATAGACTCGGCCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGGAACCCCAGGTTGACCTTGAACTTCTACGTAGCCAGGGATGACCTTGAATTAACTGTGGCACCATaGCCTCAGTTCCCTCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LRNPRLTLNFYVARDDLELTVAP*PQFPPS Trigger: AGAAGGAGGGAACTGAGGCAATGGTGCCACAGTTAA...TTCAAGGTCATCCCTGGCTACGTAGAAGTTCAAGGTCAACCTGGGGTTCCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCCCGGGCCTCCCTTCTCTGCCTGTTTAGGGTTCAGTTTGAAGAGTGGACAGGAAAGTGGGAGGTGTaGGGATCTGAAACAGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: IPRASLLCLFRVQFEEWTGKWEV*GSETAN Trigger: ATTTGCTGTTTCAGATCCCAACACCTCCCACTTTCC...TGTCCACTCTTCAAACTGAACCCTAAACAGGCAGAGAAGGGAGGCCCGGGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTGCACATGGCCCAGGATGAGCAGATGGGCGGGACTGGGTGCACAACAACTGCAATTCAAATGATTTaGTCTTCTAATTGTCCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: GLHMAQDEQMGGTGCTTTAIQMI*SSNCPC Trigger: GCACGGACAATTAGAAGACAAAATCATTTGAATTGC...AGTTGTTGTGCACCCAGTCCCGCCCATCTGCTCATCCTGGGCCATGTGCAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR TCA 72 bp | GGACAAGCTCTTCGTTCCTGGAGAAAAATGGATGTCTaGGTGAAGACACCTGACTGGTCCCAGGAGCTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GQALRSWRKMDV*VKTPDWSQELR Trigger: CCTTAGCTCCTGGGACCAGTCAGGTGTCTTCACTCAGACATCCATTTTTCTCCAGGAACGAAGAGCTTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR GCA 72 bp | TTTTCTTACTTGTTGGTCCCTTGGACCTTTCTGCTCTaGAGCTCCCGAAGGAGGCAAAGCCACATGGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: FSYLLVPWTFLL*SSRRRQSHMAV Trigger: AACAGCCATGTGGCTTTGCCTCCTTCGGGAGCTGCAGAGCAGAAAGGTCCAAGGGACCAACAAGTAAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR GCA 72 bp | CAGATTTTTCTTACTTGTTGGTCCCTTGGACCTTTCTaGTCTGCAGCTCCCGAAGGAGGCAAAGCCACATGG | + |
|
Preference number: 3 (lower is better) Translates to: QIFLTCWSLGPF*SAAPEGGKATW Trigger: CCATGTGGCTTTGCCTCCTTCGGGAGCTGCAGAGCAGAAAGGTCCAAGGGACCAACAAGTAAGAAAAATCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR CCA 72 bp | AGAGGTGTACCCACCAAGTTGGCTTTTATGCAGTGCTaGAGACTTGAGGTTTTGTGCAGACCTGGCAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RGVPTKLAFMQC*RLEVLCRPGKS Trigger: GCTCTTGCCAGGTCTGCACAAAACCTCAAGTCTCCAGCACTGCATAAAAGCCAACTTGGTGGGTACACCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR CCA 72 bp | GTCCCCTCTGACACCTGGGATCCAGATTTTGAATTGTaGCCCTGCTGGAGACACAAAGGCAAAGAGTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VPSDTWDPDFEL*PCWRHKGKECF Trigger: AAAGCACTCTTTGCCTTTGTGTCTCCAGCAGGGCCACAATTCAAAATCTGGATCCCAGGTGTCAGAGGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGGAACCCCAGGTTGACCTTGAACTTCTACGTAGCCAGGGATGACCTTGAAAAAGCCACATGGCTGTaGGTGGTGATGGATATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LRNPRLTLNFYVARDDLEKATWL*VVMDMR Trigger: TCTCATATCCATCACCACCAACAGCCATGTGGCTTT...TTCAAGGTCATCCCTGGCTACGTAGAAGTTCAAGGTCAACCTGGGGTTCCTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR GCA 72 bp | CTCCTTCTGGTTGCCATGGAGACTGGCCACTTGAATTaGCTCTGGGTCCAGTTGCTAAAGGGTCAGATTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LLLVAMETGHLN*LWVQLLKGQIF Trigger: AAAAATCTGACCCTTTAGCAACTGGACCCAGAGGCAATTCAAGTGGCCAGTCTCCATGGCAACCAGAAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR CCA 72 bp | GCTAAAGGGTCAGATTTTTCTTACTTGTTGGTCCCTTaGACCTTTCTGCTCTGCAGCTCCCGAAGGAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: AKGSDFSYLLVP*TFLLCSSRRRQ Trigger: TTGCCTCCTTCGGGAGCTGCAGAGCAGAAAGGTCCAAGGGACCAACAAGTAAGAAAAATCTGACCCTTTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR CCA 72 bp | CCAGAGCCCATAGTAGAAAAGTGGCTTACAGATGGCTaGGTTCTCTTGGTTTACCCAAAGGCATGGGTACGA | + |
|
Preference number: 3 (lower is better) Translates to: PEPIVEKWLTDG*VLLVYPKAWVR Trigger: TCGTACCCATGCCTTTGGGTAAACCAAGAGAACCCAGCCATCTGTAAGCCACTTTTCTACTATGGGCTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCAAGCATAATATCTAATTACAAAGACACAGCCAACCTTCAGGAGATCCCCGACTGGCCACTTGAATaGCCTCTGGGTCCAGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: EASIISNYKDTANLQEIPDWPLE*PLGPVA Trigger: AGCAACTGGACCCAGAGGCAATTCAAGTGGCCAGTC...GGGGATCTCCTGAAGGTTGGCTGTGTCTTTGTAATTAGATATTATGCTTGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR TCA 72 bp | GAGGTTTTGTGCAGACCTGGCAAGAGCTCTATCAACTaGACTACTGCCTTAGCCCCGACAGCAATTCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: EVLCRPGKSSIN*TTALAPTAIQM Trigger: CATTTGAATTGCTGTCGGGGCTAAGGCAGTAGTTCAGTTGATAGAGCTCTTGCCAGGTCTGCACAAAACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR TCA 72 bp | ACCCACCAAGTTGGCTTTTATGCAGTGCTGGAGACTTaGGGTTTTGTGCAGACCTGGCAAGAGCTCTATCAA | + |
|
Preference number: 3 (lower is better) Translates to: THQVGFYAVLET*GFVQTWQELYQ Trigger: TTGATAGAGCTCTTGCCAGGTCTGCACAAAACCTCAAGTCTCCAGCACTGCATAAAAGCCAACTTGGTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR GCA 72 bp | TCATCTCCCAAGGTCTCTGGAAGCCTCCCTAACCTTTaGTTAGCTTTCCCTGGTCTTTACACAACCCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: SSPKVSGSLPNL*LAFPGLYTTHQ Trigger: TTGATGGGTTGTGTAAAGACCAGGGAAAGCTAAGCAAAGGTTAGGGAGGCTTCCAGAGACCTTGGGAGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR GCA 72 bp | GAATTGTGGCCCTGCTGGAGACACAAAGGCAAAGAGTaGTTTATACCCAGAGCCCATAGTAGAAAAGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ELWPCWRHKGKE*FIPRAHSRKVA Trigger: AGCCACTTTTCTACTATGGGCTCTGGGTATAAAGCACTCTTTGCCTTTGTGTCTCCAGCAGGGCCACAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR CCA 72 bp | GTCCAGTTGCTAAAGGGTCAGATTTTTCTTACTTGTTaGTCCCTTGGACCTTTCTGCTCTGCAGCTCCCGAA | + |
|
Preference number: 3 (lower is better) Translates to: VQLLKGQIFLTC*SLGPFCSAAPE Trigger: TTCGGGAGCTGCAGAGCAGAAAGGTCCAAGGGACCAACAAGTAAGAAAAATCTGACCCTTTAGCAACTGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR CCA 72 bp | CTGGTTGCCATGGAGACTGGCCACTTGAATTGCCTCTaGGTCCAGTTGCTAAAGGGTCAGATTTTTCTTACT | + |
|
Preference number: 3 (lower is better) Translates to: LVAMETGHLNCL*VQLLKGQIFLT Trigger: AGTAAGAAAAATCTGACCCTTTAGCAACTGGACCCAGAGGCAATTCAAGTGGCCAGTCTCCATGGCAACCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR CCA 72 bp | GACACCTGGGATCCAGATTTTGAATTGTGGCCCTGCTaGAGACACAAAGGCAAAGAGTGCTTTATACCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: DTWDPDFELWPC*RHKGKECFIPR Trigger: TCTGGGTATAAAGCACTCTTTGCCTTTGTGTCTCCAGCAGGGCCACAATTCAAAATCTGGATCCCAGGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR-3UTR CAA 90 bp | GGTACGATGGCATTGTTATCTAGGGTGAAGCTGTGGGACCACAGGAGAGCAAGGTCAGATTTTTCTTACTaGTTGGTCCCTTGGACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GTMALLSRVKLWDHRRARSDFSY*LVPWTF Trigger: AAAGGTCCAAGGGACCAACAAGTAAGAAAAATCTGA...CCTTGCTCTCCTGTGGTCCCACAGCTTCACCCTAGATAACAATGCCATCGTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTCTCTGCCTGTTTAGGGTTCAGTTTGAAGAGTGGACAAATTGTATCTCATATGGAGACTGGCCACTaGAATTGCCTCTGGGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PFSACLGFSLKSGQIVSHMETGH*NCLWVQ Trigger: CTGGACCCAGAGGCAATTCAAGTGGCCAGTCTCCAT...ATGAGATACAATTTGTCCACTCTTCAAACTGAACCCTAAACAGGCAGAGAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR CCA 72 bp | AAGAGTGCTTTATACCCAGAGCCCATAGTAGAAAAGTaGCTTACAGATGGCTGGGTTCTCTTGGTTTACCCA | + |
|
Preference number: 3 (lower is better) Translates to: KSALYPEPIVEK*LTDGWVLLVYP Trigger: TGGGTAAACCAAGAGAACCCAGCCATCTGTAAGCCACTTTTCTACTATGGGCTCTGGGTATAAAGCACTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR CCA 72 bp | CTCCTGCTTCTTAACCCTGTGTTCATTATTTACAGTTaGACATGTAAGATGCACCCTGCTTTTTGTCAGACC | + |
|
Preference number: 3 (lower is better) Translates to: LLLLNPVFIIYS*TCKMHPAFCQT Trigger: GGTCTGACAAAAAGCAGGGTGCATCTTACATGTCCAACTGTAAATAATGAACACAGGGTTAAGAAGCAGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| CDS-3UTR GCA 90 bp | GATGGTGGAGAGGGCTGGCTATTCCCCGGGCCTCCCTTCTCTGCCTGTTTAGGGGGGAGCTGCAGGCATTaGAGGCGGGGACTCGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DGGEGWLFPGPPFSACLGGSCRH*RRGLGD Trigger: ATCCCCGAGTCCCCGCCTGCAATGCCTGCAGCTCCC...CCCTAAACAGGCAGAGAAGGGAGGCCCGGGGAATAGCCAGCCCTCTCCACCATC 64% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGGCGATTGGAGAGTCCCCTCCAACACTCCATTGCTCCTGCTGGGACCGCGCCTCCACCCCCGTTaGGCACCATGTCAGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GEGDWRVPSNTPLLLLGPRLHPR*APCQLS Trigger: GGACAGCTGACATGGTGCCCAACGGGGGTGGAGGCG...CGGTCCCAGCAGGAGCAATGGAGTGTTGGAGGGGACTCTCCAATCGCCCTCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| CDS-3UTR GCA 90 bp | GGGTTGCACATGGCCCAGGATGAGCAGATGGGCGGGACTGGGTGCACAACAACTCCAGGACGTGGGAGCTaGAGGCATTGCAGGCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLHMAQDEQMGGTGCTTTPGRGS*RHCRRG Trigger: TCCCCGCCTGCAATGCCTGCAGCTCCCACGTCCTGG...AGTTGTTGTGCACCCAGTCCCGCCCATCTGCTCATCCTGGGCCATGTGCAACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| CDS-3UTR CCA 90 bp | CCCGAAGGAGGCAAAGCCACATGGCTGTTGGTGGTGATGGATATGAGAGGAAGCGCCACCCCACACGGCTaGCTGCAGGACTCGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PEGGKATWLLVVMDMRGSATPHG*LQDSLV Trigger: CACCAGCGAGTCCTGCAGCCAGCCGTGTGGGGTGGC...GCTTCCTCTCATATCCATCACCACCAACAGCCATGTGGCTTTGCCTCCTTCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| 3UTR CAA 72 bp | GGAGAGGGCGATTGGAGAGTCCCCTCCAACACTCCATaGCTCCTGCTGGGACCGCAGTGTTGGGTGTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GEGDWRVPSNTP*LLLGPQCWVCA Trigger: TGCACACACCCAACACTGCGGTCCCAGCAGGAGCAATGGAGTGTTGGAGGGGACTCTCCAATCGCCCTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| CDS-3UTR TCA 90 bp | GGAGAGTCCCCTCCAACACTCCATTGCTCCTGCTGGGACCGCAGTGTTGGGTGTCTAGGATTCCGCCAGTaGTCACAACCGTTCCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GESPPTLHCSCWDRSVGCLGFRQ*SQPFPL Trigger: CAGCGGGAACGGTTGTGATCACTGGCGGAATCCTAG...ACACCCAACACTGCGGTCCCAGCAGGAGCAATGGAGTGTTGGAGGGGACTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
||
| CDS-3UTR TCA 90 bp | ATTCCCCGGGCCTCCCTTCTCTGCCTGTTTAGGGTTCAGTTTGAAGAGTGGACATGCAGGACTCGCTGGTaGGAGGTGCCAGGCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IPRASLLCLFRVQFEEWTCRTRW*EVPGRL Trigger: GAGGCGGCCTGGCACCTCTCACCAGCGAGTCCTGCA...TGTCCACTCTTCAAACTGAACCCTAAACAGGCAGAGAAGGGAGGCCCGGGGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| CDS-3UTR GCA 90 bp | GGAGAGTCCCCTCCAACACTCCATTGCTCCTGCTGGGACCGCAGTGTTGGGTGTCGGGTAATTCTGTGGTaGTGCCAACTTGAGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: GESPPTLHCSCWDRSVGCRVILW*CQLEGW Trigger: CCATCCCTCAAGTTGGCAGCACCACAGAATTACCCG...ACACCCAACACTGCGGTCCCAGCAGGAGCAATGGAGTGTTGGAGGGGACTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| CDS-3UTR GCA 90 bp | GAATGGGCATCCGCACACCCTCAGAGGGCCGAGTCTATGTGGCAAGGCATGGAGTTAGTGAAGGCCTCATaGCCAGAACTTGGCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EWASAHPQRAESMWQGMELVKAS*PELGQV Trigger: GACCTGGCCAAGTTCTGGGCATGAGGCCTTCACTAA...CTCCATGCCTTGCCACATAGACTCGGCCCTCTGAGGGTGTGCGGATGCCCATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| CDS-3UTR CCA 90 bp | CCGAGTCTATGTGGCAAGGCATGGAGGGATGGGGCGAATCAATGTGATCTATCTGGTAAGGGGAGCAAGTaGTACAGTGGCTGGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: PSLCGKAWRDGANQCDLSGKGSK*YSGWPP Trigger: GGGTGGCCAGCCACTGTACCACTTGCTCCCCTTACC...AGATAGATCACATTGATTCGCCCCATCCCTCCATGCCTTGCCACATAGACTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 72 bp | CCCGTCCCCTCTGACACCTGGGATCCAGATTTTGAATaGTGGCCCTGCTGGAGACACAAAGGCAAAGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: PVPSDTWDPDFE*WPCWRHKGKEC Trigger: GCACTCTTTGCCTTTGTGTCTCCAGCAGGGCCACAATTCAAAATCTGGATCCCAGGTGTCAGAGGGGACGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| CDS-3UTR CCA 90 bp | TTCCCTCCTTCTGGTTGCCATGGAGACTGGCCACTTGAATTGCCTCTGGGTCCACTCATGCCCAGAACTTaGCCAGGTCACCGGGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: FPPSGCHGDWPLELPLGPLMPRT*PGHRVI Trigger: AATTACCCGGTGACCTGGCCAAGTTCTGGGCATGAG...TGGACCCAGAGGCAATTCAAGTGGCCAGTCTCCATGGCAACCAGAAGGAGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 72 bp | AGTTCCCTCCTTCTGGTTGCCATGGAGACTGGCCACTaGAATTGCCTCTGGGTCCAGTTGCTAAAGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSLLLVAMETGH*NCLWVQLLKGQ Trigger: CTGACCCTTTAGCAACTGGACCCAGAGGCAATTCAAGTGGCCAGTCTCCATGGCAACCAGAAGGAGGGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| CDS-3UTR TCA 90 bp | AGAGGGCCGAGTCTATGTGGCAAGGCATGGAGGGATGGGGCGAATCAATGTGATAGCACAGGACAGCAATaGTACAGAGGAGGATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RGPSLCGKAWRDGANQCDSTGQQ*YRGGSL Trigger: CAGTGATCCTCCTCTGTATCATTGCTGTCCTGTGCT...ATCACATTGATTCGCCCCATCCCTCCATGCCTTGCCACATAGACTCGGCCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| CDS-3UTR GCA 90 bp | TTCCCTCCTTCTGGTTGCCATGGAGACTGGCCACTTGAATTGCCTCTGGGTCCACATCCTCGCCATCTGTaGCCTTCTTGCAGCAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: FPPSGCHGDWPLELPLGPHPRHL*PSCSSN Trigger: ATTACTGCTGCAAGAAGGGCACAGATGGCGAGGATG...TGGACCCAGAGGCAATTCAAGTGGCCAGTCTCCATGGCAACCAGAAGGAGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| CDS-3UTR GCA 90 bp | CCCGAAGGAGGCAAAGCCACATGGCTGTTGGTGGTGATGGATATGAGAGGAAGCGTAATTCTGTGGTGCTaGCAACTTGAGGGATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PEGGKATWLLVVMDMRGSVILWC*QLEGWG Trigger: ACCCCATCCCTCAAGTTGGCAGCACCACAGAATTAC...GCTTCCTCTCATATCCATCACCACCAACAGCCATGTGGCTTTGCCTCCTTCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| CDS-3UTR CCA 90 bp | TTGTCAGACCAACCAACCAACAGCCAACAAGATTTCAGGAGAAAAACCAGCCCAGAGCAAGTGGTACAGTaGCTGGCCACCCCACACGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSDQPTNSQQDFRRKTSPEQVVQ*LATPHG Trigger: GCCGTGTGGGGTGGCCAGCCACTGTACCACTTGCTC...TGGGCTGGTTTTTCTCCTGAAATCTTGTTGGCTGTTGGTTGGTTGGTCTGACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 72 bp | CTTATGCAGGTGTGTGGGAACTTAACTGTGGCACCATaGCCTCAGTTCCCTCCTTCTGGTTGCCATGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LMQVCGNLTVAP*PQFPPSGCHGD Trigger: GTCTCCATGGCAACCAGAAGGAGGGAACTGAGGCAATGGTGCCACAGTTAAGTTCCCACACACCTGCATAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 72 bp | TATTCCCCGTCCCCTCTGACACCTGGGATCCAGATTTaGAATTGTGGCCCTGCTGGAGACACAAAGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YSPSPLTPGIQI*NCGPAGDTKAK Trigger: CTTTGCCTTTGTGTCTCCAGCAGGGCCACAATTCAAAATCTGGATCCCAGGTGTCAGAGGGGACGGGGAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| CDS-3UTR GCA 90 bp | GAGAGTGTCTCCTGCTTCTTAACCCTGTGTTCATTATTTACAGTTGGACATGTACTCGCTGGTGAGAGGTaGCAGGCCGCCTCTGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: ESVSCFLTLCSLFTVGHVLAGER*QAASAV Trigger: GACGGCAGAGGCGGCCTGGCACCTCTCACCAGCGAG...TACATGTCCAACTGTAAATAATGAACACAGGGTTAAGAAGCAGGAGACACTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 72 bp | TGGCGACAGGTCCTGCCCTGGTCCTCAAGCATTTACTaGTACACATCTTACTGTACCTCTGATCTGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WRQVLPWSSSIY*YTSYCTSDLEA Trigger: GGCTTCCAGATCAGAGGTACAGTAAGATGTGTACAAGTAAATGCTTGAGGACCAGGGCAGGACCTGTCGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 72 bp | CTCCTCTCAAGCTCTGGGATGTCTAAGCCTCACCCTTaGTGTCCGTTTCTTTTAGGTCTGCCCACCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSSSGMSKPHP*CPFLLGLPTSS Trigger: AGATGAGGTGGGCAGACCTAAAAGAAACGGACACAAAGGGTGAGGCTTAGACATCCCAGAGCTTGAGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 72 bp | CCTCCTTCTGGTTGCCATGGAGACTGGCCACTTGAATaGCCTCTGGGTCCAGTTGCTAAAGGGTCAGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: PPSGCHGDWPLE*PLGPVAKGSDF Trigger: AAAATCTGACCCTTTAGCAACTGGACCCAGAGGCAATTCAAGTGGCCAGTCTCCATGGCAACCAGAAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 72 bp | GGTCCAGTTGCTAAAGGGTCAGATTTTTCTTACTTGTaGGTCCCTTGGACCTTTCTGCTCTGCAGCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GPVAKGSDFSYL*VPWTFLLCSSR Trigger: TCGGGAGCTGCAGAGCAGAAAGGTCCAAGGGACCAACAAGTAAGAAAAATCTGACCCTTTAGCAACTGGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 72 bp | CTGGGTCCAGTTGCTAAAGGGTCAGATTTTTCTTACTaGTTGGTCCCTTGGACCTTTCTGCTCTGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGPVAKGSDFSY*LVPWTFLLCSS Trigger: GGAGCTGCAGAGCAGAAAGGTCCAAGGGACCAACAAGTAAGAAAAATCTGACCCTTTAGCAACTGGACCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 72 bp | TCTCCTGCTGAGGCTCCCAGAGGCAGTACTTGCCTTTaGAGGTTGCTCAGTAGGGGGTTGAACAAATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPAEAPRGSTCL*RLLSRGLNKCF Trigger: AAAACATTTGTTCAACCCCCTACTGAGCAACCTCAAAAGGCAAGTACTGCCTCTGGGAGCCTCAGCAGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| CDS-3UTR CCA 90 bp | CCGAGTCTATGTGGCAAGGCATGGAGGGATGGGGCGAATCAATGTGATCTATCTGGTACTAATAGCCCTTaGATTAGTGAAGGCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: PSLCGKAWRDGANQCDLSGTNSP*ISEGLM Trigger: CATGAGGCCTTCACTAATCCAAGGGCTATTAGTACC...AGATAGATCACATTGATTCGCCCCATCCCTCCATGCCTTGCCACATAGACTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 72 bp | TCTTCTAATTGTCCGTGCTTCCTCCCAGCACCCCTTTaGTGGTTTCTAACCCACAACAAATGTCCCTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: SSNCPCFLPAPL*WFLTHNKCPCT Trigger: GGTACAGGGACATTTGTTGTGGGTTAGAAACCACAAAAGGGGTGCTGGGAGGAAGCACGGACAATTAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 72 bp | ACTACTGCCTTAGCCCCGACAGCAATTCAAATGATTTaGTCTTCTAATTGTCCGTGCTTCCTCCCAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: TTALAPTAIQMI*SSNCPCFLPAP Trigger: GGGTGCTGGGAGGAAGCACGGACAATTAGAAGACAAAATCATTTGAATTGCTGTCGGGGCTAAGGCAGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 72 bp | TCCCTGGTCTTTACACAACCCATCAAAGCAAAGGGCTaGGGGCTTATTGGAAGGTGTCATATAGCGCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLVFTQPIKAKG*GLIGRCHIALD Trigger: ATCAAGCGCTATATGACACCTTCCAATAAGCCCCAAGCCCTTTGCTTTGATGGGTTGTGTAAAGACCAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| 3UTR CAA 72 bp | ATGGAGACTGGCCACTTGAATTGCCTCTGGGTCCAGTaGCTAAAGGGTCAGATTTTTCTTACTTGTTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: METGHLNCLWVQ*LKGQIFLTCWS Trigger: GGACCAACAAGTAAGAAAAATCTGACCCTTTAGCAACTGGACCCAGAGGCAATTCAAGTGGCCAGTCTCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| CDS-3UTR GCA 90 bp | GTCTCCTGCTTCTTAACCCTGTGTTCATTATTTACAGTTGGACATGTAAGATGCCATCTGTGCCCTTCTTaGAGCAGTAATACTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSCFLTLCSLFTVGHVRCHLCPS*SSNTGA Trigger: GGCTCCAGTATTACTGCTGCAAGAAGGGCACAGATG...GCATCTTACATGTCCAACTGTAAATAATGAACACAGGGTTAAGAAGCAGGAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| CDS GCA 90 bp | GCTGGCCACCCCACACGGCTGGCTGCAGGACTCGCTGGTGAGAGGTaGCAGGCCGCCTCTGCCGTCCAGGACGTGGGAGCTGCAGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: AGHPTRLAAGLAGER*QAASAVQDVGAAGI Trigger: AATGCCTGCAGCTCCCACGTCCTGGACGGCAGAGGCGGCCTGGCACCTCTCACCAGCGAGTCCTGCAGCCAGCCGTGTGGGGTGGCCAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| CDS CCA 90 bp | GACTCGCTGGTGAGAGGTGCCAGGCCGCCTCTGCCGTCCAGGACGTaGGAGCTGCAGGCATTGCAGGCGGGGACTCGGGGATGGATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DSLVRGARPPLPSRT*ELQALQAGTRGWME Trigger: TTCCATCCATCCCCGAGTCCCCGCCTGCAATGCCTGCAGCTCCCACGTCCTGGACGGCAGAGGCGGCCTGGCACCTCTCACCAGCGAGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| CDS-3UTR CAA 90 bp | GGAGAGTCCCCTCCAACACTCCATTGCTCCTGCTGGGACCGCAGTGTTGGGTGTTCGCCTCCACCCCCGTaGGGCACCATGTCAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GESPPTLHCSCWDRSVGCSPPPP*GTMSAV Trigger: GACAGCTGACATGGTGCCCAACGGGGGTGGAGGCGA...ACACCCAACACTGCGGTCCCAGCAGGAGCAATGGAGTGTTGGAGGGGACTCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| CDS-3UTR CAA 90 bp | CCCACCTCATCTCCCAAGGTCTCTGGAAGCCTCCCTAACCTTTGCTTAGCTTTCCCTCATGCCCAGAACTaGGCCAGGTCACCGGGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: PTSSPKVSGSLPNLCLAFPHAQN*ARSPGN Trigger: ATTACCCGGTGACCTGGCCAAGTTCTGGGCATGAGG...GAAAGCTAAGCAAAGGTTAGGGAGGCTTCCAGAGACCTTGGGAGATGAGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| CDS CCA 90 bp | GGTACTAATAGCCCTTGGATTAGTGAAGGCCTCATGCCCAGAACTTaGCCAGGTCACCGGGTAATTCTGTGGTGCTGCCAACTTGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GTNSPWISEGLMPRT*PGHRVILWCCQLEG Trigger: TCCCTCAAGTTGGCAGCACCACAGAATTACCCGGTGACCTGGCCAAGTTCTGGGCATGAGGCCTTCACTAATCCAAGGGCTATTAGTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| CDS GCA 72 bp | CCCACACGGCTGGCTGCAGGACTCGCTGGTGAGAGGTaGCAGGCCGCCTCTGCCGTCCAGGACGTGGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PTRLAAGLAGER*QAASAVQDVGA Trigger: AGCTCCCACGTCCTGGACGGCAGAGGCGGCCTGGCACCTCTCACCAGCGAGTCCTGCAGCCAGCCGTGTGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| CDS CCA 72 bp | GTGAGAGGTGCCAGGCCGCCTCTGCCGTCCAGGACGTaGGAGCTGCAGGCATTGCAGGCGGGGACTCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: VRGARPPLPSRT*ELQALQAGTRG Trigger: TCCCCGAGTCCCCGCCTGCAATGCCTGCAGCTCCCACGTCCTGGACGGCAGAGGCGGCCTGGCACCTCTCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| CDS CCA 72 bp | GAGCAAGTGGTACAGTGGCTGGCCACCCCACACGGCTaGCTGCAGGACTCGCTGGTGAGAGGTGCCAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: EQVVQWLATPHG*LQDSLVRGARP Trigger: CGGCCTGGCACCTCTCACCAGCGAGTCCTGCAGCCAGCCGTGTGGGGTGGCCAGCCACTGTACCACTTGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| CDS CCA 72 bp | AGCCCTTGGATTAGTGAAGGCCTCATGCCCAGAACTTaGCCAGGTCACCGGGTAATTCTGTGGTGCTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SPWISEGLMPRT*PGHRVILWCCQ Trigger: TTGGCAGCACCACAGAATTACCCGGTGACCTGGCCAAGTTCTGGGCATGAGGCCTTCACTAATCCAAGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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| CDS GCA 72 bp | CTTCCTCCTCAGCATCCTCGCCATCTGTGCCCTTCTTaGAGCAGTAATACTGGAGCCTACAGTAGCACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LPPQHPRHLCPS*SSNTGAYSSTG Trigger: TCCTGTGCTACTGTAGGCTCCAGTATTACTGCTGCAAGAAGGGCACAGATGGCGAGGATGCTGAGGAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015628.4 |
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