Pregenerated sensors for FAM162A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003955Ensembl transcript IDs: ENSMUST00000004057.9, ENSMUST00000231351.2
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TGGAATACATCTGTGCAAAATACATGTCTGCAAAGTGAGTCTCAGATTGTATCCAAGCAGGTTTCTTGTTaGAGCCTTACTCCTGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: WNTSVQNTCLQSESQIVSKQVSC*SLTPGF Trigger: AAACCCAGGAGTAAGGCTGCAACAAGAAACCTGCTT...GGATACAATCTGAGACTCACTTTGCAGACATGTATTTTGCACAGATGTATTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004057.9 ENSMUST00000231351.2 |
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| 3UTR-3UTR CAA 90 bp | ATAGGGAAGTGGAATACATCTGTGCAAAATACATGTCTGCAAAGTGAGTCTCAGTGTAAAGCAGGTTTCTaGTTGCAGCCTTACTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: IGKWNTSVQNTCLQSESQCKAGF*LQPYSW Trigger: CCAGGAGTAAGGCTGCAACAAGAAACCTGCTTTACA...CTGAGACTCACTTTGCAGACATGTATTTTGCACAGATGTATTCCACTTCCCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004057.9 ENSMUST00000231351.2 |
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| CDS-3UTR GCA 90 bp | GGAATACATCTGTGCAAAATACATGTCTGCAAAGTGAGTCTCAGATTGTATCCTTTTGGCCTTCATAGCTaGCTCCTCTCTCAGACGGGC | + |
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Preference number: 4 (lower is better) Translates to: GIHLCKIHVCKVSLRLYPFGLHS*LLSQTG Trigger: GCCCGTCTGAGAGAGGAGGCAGCTATGAAGGCCAAA...AGGATACAATCTGAGACTCACTTTGCAGACATGTATTTTGCACAGATGTATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004057.9 ENSMUST00000231351.2 |
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| CDS-3UTR GCA 90 bp | ACATGTCTGCAAAGTGAGTCTCAGATTGTATCCTTTGTAAAGCAGGTTTCTTGTTTTGGCCTTCATAGCTaGCTCCTCTCTCAGACGGGC | + |
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Preference number: 4 (lower is better) Translates to: TCLQSESQIVSFVKQVSCFGLHS*LLSQTG Trigger: GCCCGTCTGAGAGAGGAGGCAGCTATGAAGGCCAAA...ACAAGAAACCTGCTTTACAAAGGATACAATCTGAGACTCACTTTGCAGACATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004057.9 ENSMUST00000231351.2 |
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| CDS-3UTR TCA 90 bp | GGAATACATCTGTGCAAAATACATGTCTGCAAAGTGAGTCTCAGATTGTATCCTCTTCTTGAAGCGGCCTaGCCACAGCAGGATCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: GIHLCKIHVCKVSLRLYPLLEAA*PQQDLL Trigger: AAGAAGATCCTGCTGTGGTCAGGCCGCTTCAAGAAG...AGGATACAATCTGAGACTCACTTTGCAGACATGTATTTTGCACAGATGTATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004057.9 |
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| CDS-3UTR TCA 90 bp | TTTCCACTTTGCACAGTGGGGAGGCTAGGTTTTACTTGGATGAAAGCAACAAAACAATCATTAGATAGCTaGCCTTCACCCGGAGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: FPLCTVGRLGFTWMKATKQSLDS*PSPGAC Trigger: ACAAGCTCCGGGTGAAGGTCAGCTATCTAATGATTG...TTTTGTTGCTTTCATCCAAGTAAAACCTAGCCTCCCCACTGTGCAAAGTGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004057.9 |
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| CDS-3UTR TCA 90 bp | GAGTCTCAGATTGTATCCTTTGTAAAGCAGGTTTCTTGTTGCAGCCTTACTCCTCAATCATTAGATAGCTaGCCTTCACCCGGAGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: ESQIVSFVKQVSCCSLTPQSLDS*PSPGAC Trigger: ACAAGCTCCGGGTGAAGGTCAGCTATCTAATGATTG...AGGAGTAAGGCTGCAACAAGAAACCTGCTTTACAAAGGATACAATCTGAGACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004057.9 ENSMUST00000231351.2 |
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| CDS-3UTR CCA 90 bp | ATCCTTTGTAAAGCAGGTTTCTTGTTGCAGCCTTACTCCTGGGTTTTCCAAATAACTGGGTTGGAGTTTTaGGACTTTCCTGTGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: ILCKAGFLLQPYSWVFQITGLEF*DFPVAW Trigger: CCAAGCCACAGGAAAGTCCCAAAACTCCAACCCAGT...TATTTGGAAAACCCAGGAGTAAGGCTGCAACAAGAAACCTGCTTTACAAAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004057.9 |
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| CDS-3UTR GCA 90 bp | ATCCTTTGTAAAGCAGGTTTCTTGTTGCAGCCTTACTCCTGGGTTTTCCAAATACATATAGATGCATCCTaGCACGGTCAGGGCAATCAT | + |
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Preference number: 4 (lower is better) Translates to: ILCKAGFLLQPYSWVFQIHIDAS*HGQGNH Trigger: ATGATTGCCCTGACCGTGGCAGGATGCATCTATATG...TATTTGGAAAACCCAGGAGTAAGGCTGCAACAAGAAACCTGCTTTACAAAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004057.9 ENSMUST00000231351.2 |
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| CDS-3UTR TCA 90 bp | ATCCTTTGTAAAGCAGGTTTCTTGTTGCAGCCTTACTCCTGGGTTTTCCAAATAATCAAGCATCTCAAATaGGATTGTCTCTGGGATCTC | + |
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Preference number: 4 (lower is better) Translates to: ILCKAGFLLQPYSWVFQIIKHLK*DCLWDL Trigger: GAGATCCCAGAGACAATCTCATTTGAGATGCTTGAT...TATTTGGAAAACCCAGGAGTAAGGCTGCAACAAGAAACCTGCTTTACAAAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004057.9 |
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| CDS-3UTR GCA 90 bp | TTGTTCCTCTACAGCATTAATAGGGAAGTGGAATACATCTGTGCAAAATACATGCATATAGATGCATCCTaGCACGGTCAGGGCAATCAT | + |
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Preference number: 4 (lower is better) Translates to: LFLYSINREVEYICAKYMHIDAS*HGQGNH Trigger: ATGATTGCCCTGACCGTGGCAGGATGCATCTATATG...CATGTATTTTGCACAGATGTATTCCACTTCCCTATTAATGCTGTAGAGGAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004057.9 ENSMUST00000231351.2 |
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| CDS-3UTR CCA 90 bp | ACATGTCTGCAAAGTGAGTCTCAGATTGTATCCTTTGTAAAGCAGGTTTCTTGTTTTGGGACTTTCCTGTaGCTTGGTGCAGAATCCATT | + |
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Preference number: 4 (lower is better) Translates to: TCLQSESQIVSFVKQVSCFGTFL*LGAESI Trigger: AATGGATTCTGCACCAAGCCACAGGAAAGTCCCAAA...ACAAGAAACCTGCTTTACAAAGGATACAATCTGAGACTCACTTTGCAGACATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004057.9 |
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| CDS CCA 90 bp | ATCTGTGGGCTTGTGCAGCGGCACCCCGTGTCTGTAAGACTGGGTTaGAGTTTTGGGACTTTCCTGTGGCTTGGTGCAGAATCCATTGAT | + |
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Preference number: 5 (lower is better) Translates to: ICGLVQRHPVSVRLG*SFGTFLWLGAESID Trigger: ATCAATGGATTCTGCACCAAGCCACAGGAAAGTCCCAAAACTCCAACCCAGTCTTACAGACACGGGGTGCCGCTGCACAAGCCCACAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004057.9 |
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| CDS TCA 90 bp | CCATATAGATGCATCCTGCCACGGTCAGGGCAATCATTAGATAGCTaGCCTTCACCCGGAGCTTGTTCTTCGCAGCATCAAGCATCTCAA | + |
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Preference number: 5 (lower is better) Translates to: PYRCILPRSGQSLDS*PSPGACSSQHQASQ Trigger: TTGAGATGCTTGATGCTGCGAAGAACAAGCTCCGGGTGAAGGTCAGCTATCTAATGATTGCCCTGACCGTGGCAGGATGCATCTATATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004057.9 |
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| CDS CCA 90 bp | CACCCCGTGTCTGTAAGACTGGGTTGGAGTTTTGGGACTTTCCTGTaGCTTGGTGCAGAATCCATTGATCCTCTTCAAGTCAGTGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: HPVSVRLGWSFGTFL*LGAESIDPLQVSVS Trigger: AGAAACACTGACTTGAAGAGGATCAATGGATTCTGCACCAAGCCACAGGAAAGTCCCAAAACTCCAACCCAGTCTTACAGACACGGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004057.9 |
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| CDS-3UTR CAA 90 bp | ACATGTCTGCAAAGTGAGTCTCAGATTGTATCCTTTGTAAAGCAGGTTTCTTGTTCAAAATCTGTGGGCTaGTGCAGCGGCACCCCGTGT | + |
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Preference number: 5 (lower is better) Translates to: TCLQSESQIVSFVKQVSCSKSVG*CSGTPC Trigger: ACACGGGGTGCCGCTGCACAAGCCCACAGATTTTGA...ACAAGAAACCTGCTTTACAAAGGATACAATCTGAGACTCACTTTGCAGACATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004057.9 |
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| CDS-3UTR CAA 90 bp | GGAAGTGGAATACATCTGTGCAAAATACATGTCTGCAAAGTGAGTCTCAGATTGACCTTCACCCGGAGCTaGTTCTTCGCAGCATCAAGC | + |
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Preference number: 5 (lower is better) Translates to: GSGIHLCKIHVCKVSLRLTFTRS*FFAASS Trigger: GCTTGATGCTGCGAAGAACAAGCTCCGGGTGAAGGT...CAATCTGAGACTCACTTTGCAGACATGTATTTTGCACAGATGTATTCCACTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004057.9 ENSMUST00000231351.2 |
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| CDS-3UTR CAA 90 bp | GGAAGTGGAATACATCTGTGCAAAATACATGTCTGCAAAGTGAGTCTCAGATTGGACTGGGTTGGAGTTTaGGGACTTTCCTGTGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: GSGIHLCKIHVCKVSLRLDWVGV*GLSCGL Trigger: CAAGCCACAGGAAAGTCCCAAAACTCCAACCCAGTC...CAATCTGAGACTCACTTTGCAGACATGTATTTTGCACAGATGTATTCCACTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004057.9 |
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| CDS-3UTR CAA 90 bp | TCTACAGCATTAATAGGGAAGTGGAATACATCTGTGCAAAATACATGTCTGCAAACCTTCACCCGGAGCTaGTTCTTCGCAGCATCAAGC | + |
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Preference number: 5 (lower is better) Translates to: STALIGKWNTSVQNTCLQTFTRS*FFAASS Trigger: GCTTGATGCTGCGAAGAACAAGCTCCGGGTGAAGGT...TTGCAGACATGTATTTTGCACAGATGTATTCCACTTCCCTATTAATGCTGTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004057.9 ENSMUST00000231351.2 |
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| CDS-3UTR CAA 90 bp | GGGAAGTGGAATACATCTGTGCAAAATACATGTCTGCAAAGTGAGTCTCAGATTTTGGTGCAGAATCCATaGATCCTCTTCAAGTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: GKWNTSVQNTCLQSESQILVQNP*ILFKSV Trigger: CACTGACTTGAAGAGGATCAATGGATTCTGCACCAA...AATCTGAGACTCACTTTGCAGACATGTATTTTGCACAGATGTATTCCACTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004057.9 |
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| CDS-3UTR CAA 90 bp | AGAAAATGTATTTGTTCCTCTACAGCATTAATAGGGAAGTGGAATACATCTGTGGGACTTTCCTGTGGCTaGGTGCAGAATCCATTGATC | + |
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Preference number: 5 (lower is better) Translates to: RKCICSSTALIGKWNTSVGLSCG*VQNPLI Trigger: GATCAATGGATTCTGCACCAAGCCACAGGAAAGTCC...CACAGATGTATTCCACTTCCCTATTAATGCTGTAGAGGAACAAATACATTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004057.9 |
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| CDS-3UTR CAA 90 bp | TGTTCCTCTACAGCATTAATAGGGAAGTGGAATACATCTGTGCAAAATACATGTGTCTGTAAGACTGGGTaGGAGTTTTGGGACTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: CSSTALIGKWNTSVQNTCVCKTG*EFWDFP Trigger: AGGAAAGTCCCAAAACTCCAACCCAGTCTTACAGAC...ACATGTATTTTGCACAGATGTATTCCACTTCCCTATTAATGCTGTAGAGGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004057.9 |
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| CDS CCA 72 bp | CTTGTGCAGCGGCACCCCGTGTCTGTAAGACTGGGTTaGAGTTTTGGGACTTTCCTGTGGCTTGGTGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: LVQRHPVSVRLG*SFGTFLWLGAE Trigger: TTCTGCACCAAGCCACAGGAAAGTCCCAAAACTCCAACCCAGTCTTACAGACACGGGGTGCCGCTGCACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004057.9 |
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| CDS CCA 72 bp | GGCCTGACCACAGCAGGATCTTCTTCTCAAAATCTGTaGGCTTGTGCAGCGGCACCCCGTGTCTGTAAGACT | + |
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Preference number: 6 (lower is better) Translates to: GLTTAGSSSQNL*ACAAAPRVCKT Trigger: AGTCTTACAGACACGGGGTGCCGCTGCACAAGCCCACAGATTTTGAGAAGAAGATCCTGCTGTGGTCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004057.9 |
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| CDS TCA 72 bp | TGCATCCTGCCACGGTCAGGGCAATCATTAGATAGCTaGCCTTCACCCGGAGCTTGTTCTTCGCAGCATCAA | + |
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Preference number: 6 (lower is better) Translates to: CILPRSGQSLDS*PSPGACSSQHQ Trigger: TTGATGCTGCGAAGAACAAGCTCCGGGTGAAGGTCAGCTATCTAATGATTGCCCTGACCGTGGCAGGATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004057.9 ENSMUST00000231351.2 |
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| CDS CAA 90 bp | TGGGTTGGAGTTTTGGGACTTTCCTGTGGCTTGGTGCAGAATCCATaGATCCTCTTCAAGTCAGTGTTTCTGGTAAACCTTAGAGACGAG | + |
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Preference number: 6 (lower is better) Translates to: WVGVLGLSCGLVQNP*ILFKSVFLVNLRDE Trigger: CTCGTCTCTAAGGTTTACCAGAAACACTGACTTGAAGAGGATCAATGGATTCTGCACCAAGCCACAGGAAAGTCCCAAAACTCCAACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004057.9 |
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| CDS CCA 72 bp | TCTGTAAGACTGGGTTGGAGTTTTGGGACTTTCCTGTaGCTTGGTGCAGAATCCATTGATCCTCTTCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: SVRLGWSFGTFL*LGAESIDPLQV Trigger: GACTTGAAGAGGATCAATGGATTCTGCACCAAGCCACAGGAAAGTCCCAAAACTCCAACCCAGTCTTACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004057.9 |
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