Pregenerated sensors for FAM161B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021234Ensembl transcript IDs: ENSMUST00000021659.2, ENSMUST00000065536.9
Found 214 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTATAGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTaGTCTTCCAGAGGTCCTGAGTTCAAATCCCAGAAACCACATGGT | + |
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Preference number: 1 (lower is better) Translates to: PIGGWRDGSVVKSTD*SSRGPEFKSQKPHG Trigger: ACCATGTGGTTTCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCCTATAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR CCA 90 bp | GACCTATTTCAACAAGCAGATTGGTTAGCCATTGCTGTTCCAGCCTaGGGCCAGCAGGCAGTTGTAAAGTCTTCTAAATTGAGCCGTCAA | + |
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Preference number: 1 (lower is better) Translates to: DLFQQADWLAIAVPA*GQQAVVKSSKLSRQ Trigger: TTGACGGCTCAATTTAGAAGACTTTACAACTGCCTGCTGGCCCCAGGCTGGAACAGCAATGGCTAACCAATCTGCTTGTTGAAATAGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR TCA 90 bp | ATCCCAGAAACCACATGGTGGCTCACAACCATCTGTTATGGGATATaGTGCCCTCTTCTAGATTTGTCTGAAGATGGCTACAGTGTATTC | + |
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Preference number: 1 (lower is better) Translates to: IPETTWWLTTICYGI*CPLLDLSEDGYSVF Trigger: GAATACACTGTAGCCATCTTCAGACAAATCTAGAAGAGGGCATCATATCCCATAACAGATGGTTGTGAGCCACCATGTGGTTTCTGGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR TCA 90 bp | ATGACTCTAAACTCAAGCTCCTCCACACTTGGTTGCTTGGTGCTCTaGTGTGATATGGTGAGTGACCTATTTCAACAAGCAGATTGGTTA | + |
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Preference number: 1 (lower is better) Translates to: MTLNSSSSTLGCLVL*CDMVSDLFQQADWL Trigger: TAACCAATCTGCTTGTTGAAATAGGTCACTCACCATATCACATCAGAGCACCAAGCAACCAAGTGTGGAGGAGCTTGAGTTTAGAGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR CCA 90 bp | GCAGGTTACTGGAAGCCGATGAGAATGTATTTAGTCTGGCTGTCCTaGATTTCTGTTTCCTTATTGCCACCTATTTTCTTACCTCTGTTC | + |
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Preference number: 1 (lower is better) Translates to: AGYWKPMRMYLVWLS*ISVSLLPPIFLPLF Trigger: GAACAGAGGTAAGAAAATAGGTGGCAATAAGGAAACAGAAATCCAGGACAGCCAGACTAAATACATTCTCATCGGCTTCCAGTAACCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR GCA 90 bp | TGTGGGCTCTACTTGTATTTTCTATACCTACTTCTAAGTGTAAAGTaGAAAGCAAGAGCCTTTTACTCTGGGCTAAGGTACATCTACCCT | + |
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Preference number: 1 (lower is better) Translates to: CGLYLYFLYLLLSVK*KARAFYSGLRYIYP Trigger: AGGGTAGATGTACCTTAGCCCAGAGTAAAAGGCTCTTGCTTTGCACTTTACACTTAGAAGTAGGTATAGAAAATACAAGTAGAGCCCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR CCA 90 bp | GCTAAGATTGCAGGTTACTGGAAGCCGATGAGAATGTATTTAGTCTaGCTGTCCTGGATTTCTGTTTCCTTATTGCCACCTATTTTCTTA | + |
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Preference number: 1 (lower is better) Translates to: AKIAGYWKPMRMYLV*LSWISVSLLPPIFL Trigger: TAAGAAAATAGGTGGCAATAAGGAAACAGAAATCCAGGACAGCCAGACTAAATACATTCTCATCGGCTTCCAGTAACCTGCAATCTTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR-3UTR CCA 90 bp | AAGAGGGTGAGGAAGAAAACATCCTATAGGGGGCTGGAGAGATGGCTCAGTGGTAAGCTCCTCCACACTTaGTTGCTTGGTGCTCTGATG | + |
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Preference number: 2 (lower is better) Translates to: KRVRKKTSYRGLERWLSGKLLHT*LLGALM Trigger: CATCAGAGCACCAAGCAACCAAGTGTGGAGGAGCTT...ACCACTGAGCCATCTCTCCAGCCCCCTATAGGATGTTTTCTTCCTCACCCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR-3UTR CCA 90 bp | AAACATCCTATAGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCAAGAGCCTTTTACTCTaGGCTAAGGTACATCTACCC | + |
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Preference number: 2 (lower is better) Translates to: KHPIGGWRDGSVVKSTDCKSLLL*AKVHLP Trigger: GGGTAGATGTACCTTAGCCCAGAGTAAAAGGCTCTT...GCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCCTATAGGATGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR-3UTR CCA 90 bp | GACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGAAAAGAACTGCCGCTCATTGCTGTTCCAGCCTaGGGCCAGCAGGCAGTTGTA | + |
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Preference number: 2 (lower is better) Translates to: DIRIRIVSLENSRKELPLIAVPA*GQQAVV Trigger: TACAACTGCCTGCTGGCCCCAGGCTGGAACAGCAAT...GAGCGGCAGTTCTTTTCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR-3UTR TCA 90 bp | CTTTCTACAGGAGTGCTTCCCAATCTGGGACATTTTTGCTCTCTAGAGACCATTATACCTCTTAACCGGTaGGATTCCTTGACTTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: LSTGVLPNLGHFCSLETIIPLNR*DSLTLA Trigger: AGCCAAAGTCAAGGAATCTCACCGGTTAAGAGGTAT...AATGGTCTCTAGAGAGCAAAAATGTCCCAGATTGGGAAGCACTCCTGTAGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021659.2 |
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| 3UTR-3UTR TCA 90 bp | CTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACATTTGTTGCTCTTAACCGGTaGGATTCCTTGACTTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: LKLPVCAFYRSASQSGTFVALNR*DSLTLA Trigger: AGCCAAAGTCAAGGAATCTCACCGGTTAAGAGCAAC...AAATGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065536.9 |
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| 3UTR-3UTR CCA 90 bp | TTTCTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACATTGCTCAGGGGCTTGTaGATGCGCTTTTGTGTAAGT | + |
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Preference number: 2 (lower is better) Translates to: FLKLPVCAFYRSASQSGTLLRGL*MRFCVS Trigger: ACTTACACAAAAGCGCATCCACAAGCCCCTGAGCAA...TGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021659.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACATTTATCCCAGAAACCACATaGTGGCTCACAACCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: LKLPVCAFYRSASQSGTFIPETT*WLTTIC Trigger: ACAGATGGTTGTGAGCCACCATGTGGTTTCTGGGAT...AAATGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGAACTCTGTGCTGACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGAGGTTGCTTGGTGCTCTaGTGTGATATGGTGAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: SELCADIRIRIVSLENSRGCLVL*CDMVSD Trigger: GTCACTCACCATATCACATCAGAGCACCAAGCAACC...TCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTCAGCACAGAGTTCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR-3UTR TCA 90 bp | AAGCCGATGAGAATGTATTTAGTCTGGCTGTCCTGGATTTCTGTTTCCTTATTGCCCTCGGATCCACTTTaGTCTCTGAAGTTCTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: KPMRMYLVWLSWISVSLLPSDPL*SLKFCS Trigger: AGAACAGAACTTCAGAGATCAAAGTGGATCCGAGGG...CAATAAGGAAACAGAAATCCAGGACAGCCAGACTAAATACATTCTCATCGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR-3UTR GCA 90 bp | ATAGTGTCTTTAGAGAACAGTAGAAAAGAACTGCCGCTCTGCATTTGCTATCGAGCGCTTTTGTGTAAGTaGAGGGCTGTTATCTCACGT | + |
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Preference number: 2 (lower is better) Translates to: IVSLENSRKELPLCICYRALLCK*RAVISR Trigger: ACGTGAGATAACAGCCCTGCACTTACACAAAAGCGC...TCGATAGCAAATGCAGAGCGGCAGTTCTTTTCTACTGTTCTCTAAAGACACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021659.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTACTTGTATTTTCTATACCTACTTCTAAGTGTAAAGTGCAAAGCAAGAGCCGGTTGCTTGGTGCTCTaGTGTGATATGGTGAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: LYLYFLYLLLSVKCKARAGCLVL*CDMVSD Trigger: GTCACTCACCATATCACATCAGAGCACCAAGCAACC...GGCTCTTGCTTTGCACTTTACACTTAGAAGTAGGTATAGAAAATACAAGTAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR CAA 90 bp | CCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACATTTTaGCTCTCTAGAGACCATTTGGCAATAAATGGAAACATTTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: PVCAFYRSASQSGTF*LSRDHLAINGNIFV Trigger: AACAAAAATGTTTCCATTTATTGCCAAATGGTCTCTAGAGAGCAAAAATGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR-3UTR TCA 90 bp | CTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACATTTGTTGCAGATGTGGGCTaGGAATCATGTTTTATTTCA | + |
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Preference number: 2 (lower is better) Translates to: LKLPVCAFYRSASQSGTFVADVG*ESCFIS Trigger: TGAAATAAAACATGATTCTCAGCCCACATCTGCAAC...AAATGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR-3UTR CCA 90 bp | CTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACATTTTTTCAACAAGCAGATTaGTTAGCCATTGCTGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LKLPVCAFYRSASQSGTFFQQAD*LAIAVP Trigger: TGGAACAGCAATGGCTAACCAATCTGCTTGTTGAAA...AAATGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR-3UTR CCA 90 bp | AGTGAACTCTGTGCTGACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGAAAGAGCCTTTTACTCTaGGCTAAGGTACATCTACCC | + |
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Preference number: 2 (lower is better) Translates to: SELCADIRIRIVSLENSRKSLLL*AKVHLP Trigger: GGGTAGATGTACCTTAGCCCAGAGTAAAAGGCTCTT...TCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTCAGCACAGAGTTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR CAA 90 bp | AGGAGTGCTTCCCAATCTGGGACATTTTTGCTCTCTAGAGACCATTaGGCAATAAATGGAAACATTTTTGTTTGTCAACAACCTGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: RSASQSGTFLLSRDH*AINGNIFVCQQPEE Trigger: CTCTTCAGGTTGTTGACAAACAAAAATGTTTCCATTTATTGCCAAATGGTCTCTAGAGAGCAAAAATGTCCCAGATTGGGAAGCACTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR-3UTR TCA 90 bp | GCTATCGACTTGCATAATTATCCTCTAGTGTGGAGACAAGTTCCTAGCAATTGTGTTGCAGATGTGGGCTaGGAATCATGTTTTATTTCA | + |
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Preference number: 2 (lower is better) Translates to: AIDLHNYPLVWRQVPSNCVADVG*ESCFIS Trigger: TGAAATAAAACATGATTCTCAGCCCACATCTGCAAC...ACAATTGCTAGGAACTTGTCTCCACACTAGAGGATAATTATGCAAGTCGATAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR-3UTR GCA 90 bp | CTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACATTTCTTCTAAGTGTAAAGTaGAAAGCAAGAGCCTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: LKLPVCAFYRSASQSGTFLLSVK*KARAFY Trigger: GTAAAAGGCTCTTGCTTTGCACTTTACACTTAGAAG...AAATGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR-3UTR CCA 90 bp | TTTCTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACAAGAATGTATTTAGTCTaGCTGTCCTGGATTTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: FLKLPVCAFYRSASQSGTRMYLV*LSWISV Trigger: AACAGAAATCCAGGACAGCCAGACTAAATACATTCT...TGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR-3UTR TCA 90 bp | CTCTACTTGTATTTTCTATACCTACTTCTAAGTGTAAAGTGCAAAGCAAGAGCCATCCACTTTGATCTCTaGAGTTCTGTTCTGTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LYLYFLYLLLSVKCKARAIHFDL*SSVLFS Trigger: GGAGAACAGAACAGAACTTCAGAGATCAAAGTGGAT...GGCTCTTGCTTTGCACTTTACACTTAGAAGTAGGTATAGAAAATACAAGTAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR-3UTR GCA 90 bp | CTCTACTTGTATTTTCTATACCTACTTCTAAGTGTAAAGTGCAAAGCAAGAGCCATAACAGCAGCACTCTaGTTTTCTCTCCTTGCCTTA | + |
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Preference number: 2 (lower is better) Translates to: LYLYFLYLLLSVKCKARAITAAL*FSLLAL Trigger: TAAGGCAAGGAGAGAAAAGCAGAGTGCTGCTGTTAT...GGCTCTTGCTTTGCACTTTACACTTAGAAGTAGGTATAGAAAATACAAGTAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021659.2 |
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| 3UTR-3UTR GCA 90 bp | CTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACATTTTTTCTGTTTCCTTATTaGCACCTATTTTCTTACCTC | + |
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Preference number: 2 (lower is better) Translates to: LKLPVCAFYRSASQSGTFFLFPY*HLFSYL Trigger: GAGGTAAGAAAATAGGTGGCAATAAGGAAACAGAAA...AAATGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR-3UTR CCA 90 bp | GCAATTGTTTTTCTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATTTCAACAAGCAGATTaGTTAGCCATTGCTGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: AIVFLKLPVCAFYRSASQFQQAD*LAIAVP Trigger: TGGAACAGCAATGGCTAACCAATCTGCTTGTTGAAA...TTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAGAAAAACAATTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR CAA 90 bp | ATGAGAATGTATTTAGTCTGGCTGTCCTGGATTTCTGTTTCCTTATaGCCACCTATTTTCTTACCTCTGTTCCTCTTATACCTACTTGAT | + |
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Preference number: 2 (lower is better) Translates to: MRMYLVWLSWISVSL*PPIFLPLFLLYLLD Trigger: ATCAAGTAGGTATAAGAGGAACAGAGGTAAGAAAATAGGTGGCAATAAGGAAACAGAAATCCAGGACAGCCAGACTAAATACATTCTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR-3UTR GCA 90 bp | AGTGAACTCTGTGCTGACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGACTTCTAAGTGTAAAGTaGAAAGCAAGAGCCTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: SELCADIRIRIVSLENSRLLSVK*KARAFY Trigger: GTAAAAGGCTCTTGCTTTGCACTTTACACTTAGAAG...TCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTCAGCACAGAGTTCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR CAA 90 bp | TTACCTCTGTTCCTCTTATACCTACTTGATAGATGTGGGCTCTACTaGTATTTTCTATACCTACTTCTAAGTGTAAAGTGCAAAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: LPLFLLYLLDRCGLY*YFLYLLLSVKCKAR Trigger: TCTTGCTTTGCACTTTACACTTAGAAGTAGGTATAGAAAATACAAGTAGAGCCCACATCTATCAAGTAGGTATAAGAGGAACAGAGGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR GCA 72 bp | GGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTaGTCTTCCAGAGGTCCTGAGTTCAAATCCCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: GWRDGSVVKSTD*SSRGPEFKSQK Trigger: TTTCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR CCA 72 bp | TGTGATATGGTGAGTGACCTATTTCAACAAGCAGATTaGTTAGCCATTGCTGTTCCAGCCTGGGGCCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: CDMVSDLFQQAD*LAIAVPAWGQQ Trigger: CTGCTGGCCCCAGGCTGGAACAGCAATGGCTAACCAATCTGCTTGTTGAAATAGGTCACTCACCATATCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR-3UTR CAA 90 bp | TCCCAAACCCTAACAGATGACTCTAAACTCAAGCTCCTCCACACTTGGTTGCTTGTGTTGCTCAGGGGCTaGTGGATGCGCTTTTGTGTA | + |
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Preference number: 3 (lower is better) Translates to: SQTLTDDSKLKLLHTWLLVLLRG*WMRFCV Trigger: TACACAAAAGCGCATCCACAAGCCCCTGAGCAACAC...AAGCAACCAAGTGTGGAGGAGCTTGAGTTTAGAGTCATCTGTTAGGGTTTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021659.2 |
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| 3UTR TCA 72 bp | CTCTGGGCTAAGGTACATCTACCCTCGGATCCACTTTaGTCTCTGAAGTTCTGTTCTGTTCTCCCAAACCCT | + |
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Preference number: 3 (lower is better) Translates to: LWAKVHLPSDPL*SLKFCSVLPNP Trigger: AGGGTTTGGGAGAACAGAACAGAACTTCAGAGATCAAAGTGGATCCGAGGGTAGATGTACCTTAGCCCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR CCA 72 bp | CAACAAGCAGATTGGTTAGCCATTGCTGTTCCAGCCTaGGGCCAGCAGGCAGTTGTAAAGTCTTCTAAATTG | + |
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Preference number: 3 (lower is better) Translates to: QQADWLAIAVPA*GQQAVVKSSKL Trigger: CAATTTAGAAGACTTTACAACTGCCTGCTGGCCCCAGGCTGGAACAGCAATGGCTAACCAATCTGCTTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR-3UTR CAA 90 bp | AAACATCCTATAGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCAGATGTGGGCTCTACTaGTATTTTCTATACCTACTT | + |
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Preference number: 3 (lower is better) Translates to: KHPIGGWRDGSVVKSTDCRCGLY*YFLYLL Trigger: AAGTAGGTATAGAAAATACAAGTAGAGCCCACATCT...GCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCCTATAGGATGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR TCA 72 bp | AACTCAAGCTCCTCCACACTTGGTTGCTTGGTGCTCTaGTGTGATATGGTGAGTGACCTATTTCAACAAGCA | + |
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Preference number: 3 (lower is better) Translates to: NSSSSTLGCLVL*CDMVSDLFQQA Trigger: TGCTTGTTGAAATAGGTCACTCACCATATCACATCAGAGCACCAAGCAACCAAGTGTGGAGGAGCTTGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR TCA 72 bp | ACCACATGGTGGCTCACAACCATCTGTTATGGGATATaGTGCCCTCTTCTAGATTTGTCTGAAGATGGCTAC | + |
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Preference number: 3 (lower is better) Translates to: TTWWLTTICYGI*CPLLDLSEDGY Trigger: GTAGCCATCTTCAGACAAATCTAGAAGAGGGCATCATATCCCATAACAGATGGTTGTGAGCCACCATGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR CCA 72 bp | GCAGGTTACTGGAAGCCGATGAGAATGTATTTAGTCTaGCTGTCCTGGATTTCTGTTTCCTTATTGCCACCT | + |
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Preference number: 3 (lower is better) Translates to: AGYWKPMRMYLV*LSWISVSLLPP Trigger: AGGTGGCAATAAGGAAACAGAAATCCAGGACAGCCAGACTAAATACATTCTCATCGGCTTCCAGTAACCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR-3UTR CAA 90 bp | CTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACATTTACCCTCGGATCCACTTaGATCTCTGAAGTTCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: LKLPVCAFYRSASQSGTFTLGST*ISEVLF Trigger: GAACAGAACTTCAGAGATCAAAGTGGATCCGAGGGT...AAATGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| 3UTR TCA 72 bp | ATAACAGCAGCACTCTGCTTTTCTCTCCTTGCCTTATaGTACATCAGTTATGAAAGAGGTGATGCTGGGGTG | + |
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Preference number: 3 (lower is better) Translates to: ITAALCFSLLAL*YISYERGDAGV Trigger: CACCCCAGCATCACCTCTTTCATAACTGATGTATCATAAGGCAAGGAGAGAAAAGCAGAGTGCTGCTGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021659.2 |
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| 3UTR TCA 72 bp | CTAAGGTACATCTACCCTCGGATCCACTTTGATCTCTaGAGTTCTGTTCTGTTCTCCCAAACCCTAACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: LRYIYPRIHFDL*SSVLFSQTLTD Trigger: ATCTGTTAGGGTTTGGGAGAACAGAACAGAACTTCAGAGATCAAAGTGGATCCGAGGGTAGATGTACCTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTGAACTCTGTGCTGACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGAACCCTCGGATCCACTTaGATCTCTGAAGTTCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SELCADIRIRIVSLENSRTLGST*ISEVLF Trigger: GAACAGAACTTCAGAGATCAAAGTGGATCCGAGGGT...TCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTCAGCACAGAGTTCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| 3UTR-3UTR CAA 90 bp | GACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGAAAAGAACTGCCGCTCATTTCAACAAGCAGATaGGTTAGCCATTGCTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: DIRIRIVSLENSRKELPLISTSR*VSHCCS Trigger: GGAACAGCAATGGCTAACCAATCTGCTTGTTGAAAT...GAGCGGCAGTTCTTTTCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| 3UTR-3UTR CAA 90 bp | CAATCTGGGACATTTTTGCTCTCTAGAGACCATTTGGCAATAAATGGAAACATTATTTCAACAAGCAGATaGGTTAGCCATTGCTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: QSGTFLLSRDHLAINGNIISTSR*VSHCCS Trigger: GGAACAGCAATGGCTAACCAATCTGCTTGTTGAAAT...AATGTTTCCATTTATTGCCAAATGGTCTCTAGAGAGCAAAAATGTCCCAGATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| 3UTR TCA 72 bp | ATGATAAGGCCTGTACTTAAGGTTGCAGATGTGGGCTaGGAATCATGTTTTATTTCACACACAGTATTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: MIRPVLKVADVG*ESCFISHTVFL Trigger: TAGGAATACTGTGTGTGAAATAAAACATGATTCTCAGCCCACATCTGCAACCTTAAGTACAGGCCTTATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| 3UTR CCA 72 bp | GCATTTGCTATCGACTTGCATAATTATCCTCTAGTGTaGAGACAAGTTCCTAGCAATTGTTTTTCTAAAATT | + |
|
Preference number: 3 (lower is better) Translates to: AFAIDLHNYPLV*RQVPSNCFSKI Trigger: AATTTTAGAAAAACAATTGCTAGGAACTTGTCTCCACACTAGAGGATAATTATGCAAGTCGATAGCAAATGC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR GCA 90 bp | GCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCGGGCAGGTAGACGTGTaGCGGCACAGGCTGGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: AQWLRALTALPEVLSSNPGQVDV*RHRLGP Trigger: CGGGCCCAGCCTGTGCCGGCACACGTCTACCTGCCC...GGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR GCA 90 bp | AAGAGGGTGAGGAAGAAAACATCCTATAGGGGGCTGGAGAGATGGCTCAGTGGTCCTCACGCAGTGTCATaGGGAATGGCTGAGGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: KRVRKKTSYRGLERWLSGPHAVS*GMAEGR Trigger: CCGTCCCTCAGCCATTCCGCATGACACTGCGTGAGG...ACCACTGAGCCATCTCTCCAGCCCCCTATAGGATGTTTTCTTCCTCACCCTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR GCA 90 bp | GCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCCCTCACGCAGTGTCATaGGGAATGGCTGAGGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: AQWLRALTALPEVLSSNPPHAVS*GMAEGR Trigger: CCGTCCCTCAGCCATTCCGCATGACACTGCGTGAGG...GGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR TCA 90 bp | GCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCTTCTGGCTCAGTGTCTaGGGAGGACGACTTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQWLRALTALPEVLSSNPFWLSV*GGRLGR Trigger: CCTCCCAAGTCGTCCTCCTCAGACACTGAGCCAGAA...GGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR TCA 90 bp | TGGTTAGCCATTGCTGTTCCAGCCTGGGGCCAGCAGGCAGTTGTAAAGTCTTCTGTCATGCGGAATGGCTaGGGGACGGTGATGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: WLAIAVPAWGQQAVVKSSVMRNG*GTVMED Trigger: ATCTTCCATCACCGTCCCTCAGCCATTCCGCATGAC...AGAAGACTTTACAACTGCCTGCTGGCCCCAGGCTGGAACAGCAATGGCTAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR TCA 90 bp | GCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCCCTCTCTGCGCTCCATaGTCTCCTGATAGAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AQWLRALTALPEVLSSNPPLCAP*SPDRGA Trigger: TGCCCCTCTATCAGGAGATCATGGAGCGCAGAGAGG...GGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR GCA 90 bp | CTTTCTACAGGAGTGCTTCCCAATCTGGGACATTTTTGCTCTCTAGAGACCATTGCTTCTCCTCCTGGGTaGGGGCAGCCGTTCGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSTGVLPNLGHFCSLETIASPPG*GQPFGE Trigger: CTCCCCGAACGGCTGCCCGCACCCAGGAGGAGAAGC...AATGGTCTCTAGAGAGCAAAAATGTCCCAGATTGGGAAGCACTCCTGTAGAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | AAACATCCTATAGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCGGGCTGAGGAACTCATaGAGTTTGCCAGCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KHPIGGWRDGSVVKSTDCGLRNS*SLPALG Trigger: GCCCAGAGCTGGCAAACTCCATGAGTTCCTCAGCCC...GCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCCTATAGGATGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR GCA 90 bp | TGGTTAGCCATTGCTGTTCCAGCCTGGGGCCAGCAGGCAGTTGTAAAGTCTTCTGCCTGTAGCCTTTCCTaGTCAAAAGAGGCAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: WLAIAVPAWGQQAVVKSSACSLS*SKEAGE Trigger: CTCACCTGCCTCTTTTGAGCAGGAAAGGCTACAGGC...AGAAGACTTTACAACTGCCTGCTGGCCCCAGGCTGGAACAGCAATGGCTAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR GCA 90 bp | AAGCCGATGAGAATGTATTTAGTCTGGCTGTCCTGGATTTCTGTTTCCTTATTGGGGCAGGTAGACGTGTaGCGGCACAGGCTGGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KPMRMYLVWLSWISVSLLGQVDV*RHRLGP Trigger: CGGGCCCAGCCTGTGCCGGCACACGTCTACCTGCCC...CAATAAGGAAACAGAAATCCAGGACAGCCAGACTAAATACATTCTCATCGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | AAACATCCTATAGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCGGAGTTTGCCAGCTCTaGGCAAAACCAGCCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KHPIGGWRDGSVVKSTDCGVCQL*AKPALL Trigger: GAGAAGGGCTGGTTTTGCCCAGAGCTGGCAAACTCC...GCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCCTATAGGATGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | GCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCGGAGTTTGCCAGCTCTaGGCAAAACCAGCCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AQWLRALTALPEVLSSNPGVCQL*AKPALL Trigger: GAGAAGGGCTGGTTTTGCCCAGAGCTGGCAAACTCC...GGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | GCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCCAAACACTTCTGTGCTaGGAGGGAGGCCCAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AQWLRALTALPEVLSSNPQTLLC*EGGPES Trigger: AGACTCTGGGCCTCCCTCCCAGCACAGAAGTGTTTG...GGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | GCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCCAGTGTCATGCGGAATaGCTGAGGGACGGTGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: AQWLRALTALPEVLSSNPQCHAE*LRDGDG Trigger: TCCATCACCGTCCCTCAGCCATTCCGCATGACACTG...GGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | TGGTTAGCCATTGCTGTTCCAGCCTGGGGCCAGCAGGCAGTTGTAAAGTCTTCTTCCATGGCCCTCATCTaGATTCGGATTTTCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WLAIAVPAWGQQAVVKSSSMALI*IRIFLR Trigger: CCTCAGGAAAATCCGAATCCAGATGAGGGCCATGGA...AGAAGACTTTACAACTGCCTGCTGGCCCCAGGCTGGAACAGCAATGGCTAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGGGTGAGGAAGAAAACATCCTATAGGGGGCTGGAGAGATGGCTCAGTGGTTTTTGTGGGGATCCATaGCCTTGGCCCTCAAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KRVRKKTSYRGLERWLSGFCGDP*PWPSRS Trigger: TGACCTTGAGGGCCAAGGCCATGGATCCCCACAAAA...ACCACTGAGCCATCTCTCCAGCCCCCTATAGGATGTTTTCTTCCTCACCCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR TCA 90 bp | GCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCTCTTCTCAAGGAAGCTaGAGGGCTTCAAGGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AQWLRALTALPEVLSSNPSSQGS*RASRRR Trigger: TCTCCTCCTTGAAGCCCTTCAGCTTCCTTGAGAAGA...GGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR GCA 90 bp | AAGAGGGTGAGGAAGAAAACATCCTATAGGGGGCTGGAGAGATGGCTCAGTGGTAGCCCTTCTCCAAACTaGTCATCTTCTGGCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KRVRKKTSYRGLERWLSGSPSPN*SSSGSV Trigger: CACTGAGCCAGAAGATGAGCAGTTTGGAGAAGGGCT...ACCACTGAGCCATCTCTCCAGCCCCCTATAGGATGTTTTCTTCCTCACCCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGGGTGAGGAAGAAAACATCCTATAGGGGGCTGGAGAGATGGCTCAGTGGTCTGCTTCGGAACCTGTaGGGTTCTATAAAAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KRVRKKTSYRGLERWLSGLLRNL*GSIKAP Trigger: GGGAGCTTTTATAGAACCCCACAGGTTCCGAAGCAG...ACCACTGAGCCATCTCTCCAGCCCCCTATAGGATGTTTTCTTCCTCACCCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | GCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCCTGCTTCGGAACCTGTaGGGTTCTATAAAAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AQWLRALTALPEVLSSNPLLRNL*GSIKAP Trigger: GGGAGCTTTTATAGAACCCCACAGGTTCCGAAGCAG...GGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | TGGTTAGCCATTGCTGTTCCAGCCTGGGGCCAGCAGGCAGTTGTAAAGTCTTCTCTGTGCCTTGACTCTTaGTTCTCACAAACTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WLAIAVPAWGQQAVVKSSLCLDS*FSQTPP Trigger: AGGAGGAGTTTGTGAGAACCAAGAGTCAAGGCACAG...AGAAGACTTTACAACTGCCTGCTGGCCCCAGGCTGGAACAGCAATGGCTAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR GCA 90 bp | TTGCAGATGTGGGCTGAGAATCATGTTTTATTTCACACACAGTATTCCTATGTTGCTTCTCCTCCTGGGTaGGGGCAGCCGTTCGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LQMWAENHVLFHTQYSYVASPPG*GQPFGE Trigger: CTCCCCGAACGGCTGCCCGCACCCAGGAGGAGAAGC...AACATAGGAATACTGTGTGTGAAATAAAACATGATTCTCAGCCCACATCTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | TCCCAAACCCTAACAGATGACTCTAAACTCAAGCTCCTCCACACTTGGTTGCTTCAGTGTCATGCGGAATaGCTGAGGGACGGTGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQTLTDDSKLKLLHTWLLQCHAE*LRDGDG Trigger: TCCATCACCGTCCCTCAGCCATTCCGCATGACACTG...AAGCAACCAAGTGTGGAGGAGCTTGAGTTTAGAGTCATCTGTTAGGGTTTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACATCCTCGCCCTGCTTCTaGGCCTGTAGCCTTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLKLPVCAFYRSASQSGTSSPCF*ACSLSC Trigger: GCAGGAAAGGCTACAGGCCCAGAAGCAGGGCGAGGA...TGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR TCA 90 bp | GACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGAAAAGAACTGCCGCTCCTCAAAAGAGGCAGGTaGGGCCAGCCACTGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DIRIRIVSLENSRKELPLLKRGR*GQPLGL Trigger: AAGGCCCAGTGGCTGGCCTCACCTGCCTCTTTTGAG...GAGCGGCAGTTCTTTTCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR GCA 90 bp | AAGAGGGTGAGGAAGAAAACATCCTATAGGGGGCTGGAGAGATGGCTCAGTGGTGGAGCGTCTTCCTTTTaGTGTTCTTTCTTCTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRVRKKTSYRGLERWLSGGASSF*CSFFSR Trigger: CCTTGAGAAGAAAGAACAGCAAAAGGAAGACGCTCC...ACCACTGAGCCATCTCTCCAGCCCCCTATAGGATGTTTTCTTCCTCACCCTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | ATAGTGTCTTTAGAGAACAGTAGAAAAGAACTGCCGCTCTGCATTTGCTATCGATCCTCGCCCTGCTTCTaGGCCTGTAGCCTTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IVSLENSRKELPLCICYRSSPCF*ACSLSC Trigger: GCAGGAAAGGCTACAGGCCCAGAAGCAGGGCGAGGA...TCGATAGCAAATGCAGAGCGGCAGTTCTTTTCTACTGTTCTCTAAAGACACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | TCCCAAACCCTAACAGATGACTCTAAACTCAAGCTCCTCCACACTTGGTTGCTTAGCCGAGTCTCTCTGTaGAGCGTCTTCCTTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQTLTDDSKLKLLHTWLLSRVSL*SVFLLL Trigger: CAGCAAAAGGAAGACGCTCCACAGAGAGACTCGGCT...AAGCAACCAAGTGTGGAGGAGCTTGAGTTTAGAGTCATCTGTTAGGGTTTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | CTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACATTTTCTTTGGGGAGACCTTaGTCTGAGCCACAGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LKLPVCAFYRSASQSGTFSLGRP*SEPQQP Trigger: CGGCTGCTGTGGCTCAGACCAAGGTCTCCCCAAAGA...AAATGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR TCA 90 bp | GACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGAAAAGAACTGCCGCTCCCTCTCTGCGCTCCATaGTCTCCTGATAGAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DIRIRIVSLENSRKELPLPLCAP*SPDRGA Trigger: TGCCCCTCTATCAGGAGATCATGGAGCGCAGAGAGG...GAGCGGCAGTTCTTTTCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR GCA 90 bp | TCCCAAACCCTAACAGATGACTCTAAACTCAAGCTCCTCCACACTTGGTTGCTTGGAACTCATGGAGTTTaGCAGCTCTGGGCAAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: SQTLTDDSKLKLLHTWLLGTHGV*QLWAKP Trigger: TGGTTTTGCCCAGAGCTGGCAAACTCCATGAGTTCC...AAGCAACCAAGTGTGGAGGAGCTTGAGTTTAGAGTCATCTGTTAGGGTTTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR GCA 90 bp | AAGCCGATGAGAATGTATTTAGTCTGGCTGTCCTGGATTTCTGTTTCCTTATTGGAGCAAACACTTCTGTaGTGGGAGGGAGGCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KPMRMYLVWLSWISVSLLEQTLL*WEGGPE Trigger: CTCTGGGCCTCCCTCCCAGCACAGAAGTGTTTGCTC...CAATAAGGAAACAGAAATCCAGGACAGCCAGACTAAATACATTCTCATCGGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | GCAATTGTTTTTCTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAAAGAGATGGAGGGTCCTaGACCTGTGGCTTCCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AIVFLKLPVCAFYRSASQRDGGS*TCGFPL Trigger: CAGGGGGAAGCCACAGGTCCAGGACCCTCCATCTCT...TTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAGAAAAACAATTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | CTTTCTACAGGAGTGCTTCCCAATCTGGGACATTTTTGCTCTCTAGAGACCATTAGCATCACAGGATCGTaGAGTGTGACTCAGGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSTGVLPNLGHFCSLETISITGS*SVTQVG Trigger: GCCAACCTGAGTCACACTCCACGATCCTGTGATGCT...AATGGTCTCTAGAGAGCAAAAATGTCCCAGATTGGGAAGCACTCCTGTAGAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR TCA 90 bp | CTTTCTACAGGAGTGCTTCCCAATCTGGGACATTTTTGCTCTCTAGAGACCATTACTGCCTCTGTGCCTTaGCTCTTGGTTCTCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSTGVLPNLGHFCSLETITASVP*LLVLTN Trigger: GTTTGTGAGAACCAAGAGTCAAGGCACAGAGGCAGT...AATGGTCTCTAGAGAGCAAAAATGTCCCAGATTGGGAAGCACTCCTGTAGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR GCA 90 bp | AGTGAACTCTGTGCTGACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGAGAGCAAACACTTCTGTaGTGGGAGGGAGGCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SELCADIRIRIVSLENSREQTLL*WEGGPE Trigger: CTCTGGGCCTCCCTCCCAGCACAGAAGTGTTTGCTC...TCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTCAGCACAGAGTTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | TTGCAGATGTGGGCTGAGAATCATGTTTTATTTCACACACAGTATTCCTATGTTAGAGATGGAGGGTCCTaGACCTGTGGCTTCCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQMWAENHVLFHTQYSYVRDGGS*TCGFPL Trigger: CAGGGGGAAGCCACAGGTCCAGGACCCTCCATCTCT...AACATAGGAATACTGTGTGTGAAATAAAACATGATTCTCAGCCCACATCTGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | CTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACATTTAGCCGAGTCTCTCTGTaGAGCGTCTTCCTTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKLPVCAFYRSASQSGTFSRVSL*SVFLLL Trigger: CAGCAAAAGGAAGACGCTCCACAGAGAGACTCGGCT...AAATGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | AGTGAACTCTGTGCTGACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGAAGGAGCTCCGCTTCCTaGAGTTTGTCGCCAAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SELCADIRIRIVSLENSRRSSAS*SLSPRA Trigger: AGCCCTTGGCGACAAACTCCAGGAAGCGGAGCTCCT...TCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTCAGCACAGAGTTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACAAGCATCACAGGATCGTaGAGTGTGACTCAGGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLKLPVCAFYRSASQSGTSITGS*SVTQVG Trigger: GCCAACCTGAGTCACACTCCACGATCCTGTGATGCT...TGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | GACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGAAAAGAACTGCCGCTCCAGAGAACGACTCCTTaGCAGGGGAGTAGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DIRIRIVSLENSRKELPLQRTTP*QGSSCW Trigger: CCAACAGCTACTCCCCTGCCAAGGAGTCGTTCTCTG...GAGCGGCAGTTCTTTTCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | ATAGTGTCTTTAGAGAACAGTAGAAAAGAACTGCCGCTCTGCATTTGCTATCGAGGGGATCCATGGCCTTaGCCCTCAAGGTCACTGATT | + |
|
Preference number: 4 (lower is better) Translates to: IVSLENSRKELPLCICYRGDPWP*PSRSLI Trigger: AATCAGTGACCTTGAGGGCCAAGGCCATGGATCCCC...TCGATAGCAAATGCAGAGCGGCAGTTCTTTTCTACTGTTCTCTAAAGACACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR TCA 90 bp | TGTGGGCTCTACTTGTATTTTCTATACCTACTTCTAAGTGTAAAGTGCAAAGCATTCTGGCTCAGTGTCTaGGGAGGACGACTTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CGLYLYFLYLLLSVKCKAFWLSV*GGRLGR Trigger: CCTCCCAAGTCGTCCTCCTCAGACACTGAGCCAGAA...TGCTTTGCACTTTACACTTAGAAGTAGGTATAGAAAATACAAGTAGAGCCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR TCA 90 bp | CTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACATTTACTGCCTCTGTGCCTTaGCTCTTGGTTCTCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LKLPVCAFYRSASQSGTFTASVP*LLVLTN Trigger: GTTTGTGAGAACCAAGAGTCAAGGCACAGAGGCAGT...AAATGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR GCA 90 bp | CTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACATTTGGAACTCATGGAGTTTaGCAGCTCTGGGCAAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: LKLPVCAFYRSASQSGTFGTHGV*QLWAKP Trigger: TGGTTTTGCCCAGAGCTGGCAAACTCCATGAGTTCC...AAATGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR GCA 90 bp | CAATCTGGGACATTTTTGCTCTCTAGAGACCATTTGGCAATAAATGGAAACATTCGCCTCATGGAGCCATaGCTAAGAGATGGAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSGTFLLSRDHLAINGNIRLMEP*LRDGGS Trigger: GGACCCTCCATCTCTTAGGCATGGCTCCATGAGGCG...AATGTTTCCATTTATTGCCAAATGGTCTCTAGAGAGCAAAAATGTCCCAGATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR GCA 90 bp | GACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGAAAAGAACTGCCGCTCGCCTGTAGCCTTTCCTaGTCAAAAGAGGCAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DIRIRIVSLENSRKELPLACSLS*SKEAGE Trigger: CTCACCTGCCTCTTTTGAGCAGGAAAGGCTACAGGC...GAGCGGCAGTTCTTTTCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | GCTATCGACTTGCATAATTATCCTCTAGTGTGGAGACAAGTTCCTAGCAATTGTCTGAGGAGGACGACTTaGGAGGAAATATCTCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: AIDLHNYPLVWRQVPSNCLRRTT*EEISHG Trigger: GCCGTGAGATATTTCCTCCCAAGTCGTCCTCCTCAG...ACAATTGCTAGGAACTTGTCTCCACACTAGAGGATAATTATGCAAGTCGATAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | GCAATTGTTTTTCTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAACAAACACTTCTGTGCTaGGAGGGAGGCCCAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AIVFLKLPVCAFYRSASQQTLLC*EGGPES Trigger: AGACTCTGGGCCTCCCTCCCAGCACAGAAGTGTTTG...TTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAGAAAAACAATTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | TGTGGGCTCTACTTGTATTTTCTATACCTACTTCTAAGTGTAAAGTGCAAAGCATCTTTGGGGAGACCTTaGTCTGAGCCACAGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: CGLYLYFLYLLLSVKCKASLGRP*SEPQQP Trigger: CGGCTGCTGTGGCTCAGACCAAGGTCTCCCCAAAGA...TGCTTTGCACTTTACACTTAGAAGTAGGTATAGAAAATACAAGTAGAGCCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | CAATCTGGGACATTTTTGCTCTCTAGAGACCATTTGGCAATAAATGGAAACATTAGGAGCTCCGCTTCCTaGAGTTTGTCGCCAAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QSGTFLLSRDHLAINGNIRSSAS*SLSPRA Trigger: AGCCCTTGGCGACAAACTCCAGGAAGCGGAGCTCCT...AATGTTTCCATTTATTGCCAAATGGTCTCTAGAGAGCAAAAATGTCCCAGATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACATCCATGGCCCTCATCTaGATTCGGATTTTCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLKLPVCAFYRSASQSGTSMALI*IRIFLR Trigger: CCTCAGGAAAATCCGAATCCAGATGAGGGCCATGGA...TGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR TCA 90 bp | CAATCTGGGACATTTTTGCTCTCTAGAGACCATTTGGCAATAAATGGAAACATTGTCATGCGGAATGGCTaGGGGACGGTGATGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QSGTFLLSRDHLAINGNIVMRNG*GTVMED Trigger: ATCTTCCATCACCGTCCCTCAGCCATTCCGCATGAC...AATGTTTCCATTTATTGCCAAATGGTCTCTAGAGAGCAAAAATGTCCCAGATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR TCA 90 bp | TTTCTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACATGCACCTCCAACCACTaGATGCTCATGTCTGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLKLPVCAFYRSASQSGTCTSNH*MLMSDL Trigger: CAAATCAGACATGAGCATTCAGTGGTTGGAGGTGCA...TGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | AGTGAACTCTGTGCTGACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGACTGAGGAGGACGACTTaGGAGGAAATATCTCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: SELCADIRIRIVSLENSRLRRTT*EEISHG Trigger: GCCGTGAGATATTTCCTCCCAAGTCGTCCTCCTCAG...TCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTCAGCACAGAGTTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | GACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGAAAAGAACTGCCGCTCCCCCTGCTCTTGTCTTaGAAGAAGCTCTCCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DIRIRIVSLENSRKELPLPLLLS*KKLSKS Trigger: AGACTTGGAGAGCTTCTTCCAAGACAAGAGCAGGGG...GAGCGGCAGTTCTTTTCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACAGAGTGTGACTCAGGTTaGCAGTTCTTAGCAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLKLPVCAFYRSASQSGTECDSG*QFLARR Trigger: CCTTCTTGCTAAGAACTGCCAACCTGAGTCACACTC...TGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | CTCTACTTGTATTTTCTATACCTACTTCTAAGTGTAAAGTGCAAAGCAAGAGCCCAGAGAACGACTCCTTaGCAGGGGAGTAGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LYLYFLYLLLSVKCKARAQRTTP*QGSSCW Trigger: CCAACAGCTACTCCCCTGCCAAGGAGTCGTTCTCTG...GGCTCTTGCTTTGCACTTTACACTTAGAAGTAGGTATAGAAAATACAAGTAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | TGTGGGCTCTACTTGTATTTTCTATACCTACTTCTAAGTGTAAAGTGCAAAGCAGGGGATCCATGGCCTTaGCCCTCAAGGTCACTGATT | + |
|
Preference number: 4 (lower is better) Translates to: CGLYLYFLYLLLSVKCKAGDPWP*PSRSLI Trigger: AATCAGTGACCTTGAGGGCCAAGGCCATGGATCCCC...TGCTTTGCACTTTACACTTAGAAGTAGGTATAGAAAATACAAGTAGAGCCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR GCA 90 bp | GCAATTGTTTTTCTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAAAGCCCTTCTCCAAACTaGTCATCTTCTGGCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AIVFLKLPVCAFYRSASQSPSPN*SSSGSV Trigger: CACTGAGCCAGAAGATGAGCAGTTTGGAGAAGGGCT...TTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAGAAAAACAATTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR GCA 90 bp | TTTCTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACACCTCCAACCACTGAATaGTCATGTCTGATTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLKLPVCAFYRSASQSGTPPTTE*SCLICP Trigger: AGGACAAATCAGACATGAGCATTCAGTGGTTGGAGG...TGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | AGTGAACTCTGTGCTGACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGACCCCTGCTCTTGTCTTaGAAGAAGCTCTCCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SELCADIRIRIVSLENSRPLLLS*KKLSKS Trigger: AGACTTGGAGAGCTTCTTCCAAGACAAGAGCAGGGG...TCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTCAGCACAGAGTTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | AAGCCGATGAGAATGTATTTAGTCTGGCTGTCCTGGATTTCTGTTTCCTTATTGGAGTGTGACTCAGGTTaGCAGTTCTTAGCAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPMRMYLVWLSWISVSLLECDSG*QFLARR Trigger: CCTTCTTGCTAAGAACTGCCAACCTGAGTCACACTC...CAATAAGGAAACAGAAATCCAGGACAGCCAGACTAAATACATTCTCATCGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | TGTGGGCTCTACTTGTATTTTCTATACCTACTTCTAAGTGTAAAGTGCAAAGCATTTTGTGGGGATCCATaGCCTTGGCCCTCAAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CGLYLYFLYLLLSVKCKAFCGDP*PWPSRS Trigger: TGACCTTGAGGGCCAAGGCCATGGATCCCCACAAAA...TGCTTTGCACTTTACACTTAGAAGTAGGTATAGAAAATACAAGTAGAGCCCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | GACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGAAAAGAACTGCCGCTCCTGTGCCTTGACTCTTaGTTCTCACAAACTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DIRIRIVSLENSRKELPLLCLDS*FSQTPP Trigger: AGGAGGAGTTTGTGAGAACCAAGAGTCAAGGCACAG...GAGCGGCAGTTCTTTTCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| 3UTR CAA 72 bp | GCTTTCTACAGGAGTGCTTCCCAATCTGGGACATTTTaGCTCTCTAGAGACCATTTGGCAATAAATGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AFYRSASQSGTF*LSRDHLAINGN Trigger: GTTTCCATTTATTGCCAAATGGTCTCTAGAGAGCAAAAATGTCCCAGATTGGGAAGCACTCCTGTAGAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR TCA 90 bp | TGTGGGCTCTACTTGTATTTTCTATACCTACTTCTAAGTGTAAAGTGCAAAGCATCTTCTCAAGGAAGCTaGAGGGCTTCAAGGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CGLYLYFLYLLLSVKCKASSQGS*RASRRR Trigger: TCTCCTCCTTGAAGCCCTTCAGCTTCCTTGAGAAGA...TGCTTTGCACTTTACACTTAGAAGTAGGTATAGAAAATACAAGTAGAGCCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | GCTATCGACTTGCATAATTATCCTCTAGTGTGGAGACAAGTTCCTAGCAATTGTCTGTCTGGATCAGACTaGAAGAGAGACTCCAATACA | + |
|
Preference number: 4 (lower is better) Translates to: AIDLHNYPLVWRQVPSNCLSGSD*KRDSNT Trigger: TGTATTGGAGTCTCTCTTCCAGTCTGATCCAGACAG...ACAATTGCTAGGAACTTGTCTCCACACTAGAGGATAATTATGCAAGTCGATAGC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | ATAGTGTCTTTAGAGAACAGTAGAAAAGAACTGCCGCTCTGCATTTGCTATCGAGTTCAGATCACTGTCTaGATCAGACTGGAAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IVSLENSRKELPLCICYRVQITV*IRLEER Trigger: TCTCTCTTCCAGTCTGATCCAGACAGTGATCTGAAC...TCGATAGCAAATGCAGAGCGGCAGTTCTTTTCTACTGTTCTCTAAAGACACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR TCA 90 bp | CTCTACTTGTATTTTCTATACCTACTTCTAAGTGTAAAGTGCAAAGCAAGAGCCTGCACCTCCAACCACTaGATGCTCATGTCTGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: LYLYFLYLLLSVKCKARACTSNH*MLMSDL Trigger: CAAATCAGACATGAGCATTCAGTGGTTGGAGGTGCA...GGCTCTTGCTTTGCACTTTACACTTAGAAGTAGGTATAGAAAATACAAGTAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR GCA 90 bp | CAATCTGGGACATTTTTGCTCTCTAGAGACCATTTGGCAATAAATGGAAACATTGACGGTGATGGAAGATaGCCAAGAGCAAACACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSGTFLLSRDHLAINGNIDGDGR*PRANTS Trigger: AGAAGTGTTTGCTCTTGGGCATCTTCCATCACCGTC...AATGTTTCCATTTATTGCCAAATGGTCTCTAGAGAGCAAAAATGTCCCAGATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR GCA 90 bp | TGTGGGCTCTACTTGTATTTTCTATACCTACTTCTAAGTGTAAAGTGCAAAGCAGACGGTGATGGAAGATaGCCAAGAGCAAACACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CGLYLYFLYLLLSVKCKADGDGR*PRANTS Trigger: AGAAGTGTTTGCTCTTGGGCATCTTCCATCACCGTC...TGCTTTGCACTTTACACTTAGAAGTAGGTATAGAAAATACAAGTAGAGCCCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR GCA 90 bp | AGTGAACTCTGTGCTGACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGACCTCCAACCACTGAATaGTCATGTCTGATTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SELCADIRIRIVSLENSRPPTTE*SCLICP Trigger: AGGACAAATCAGACATGAGCATTCAGTGGTTGGAGG...TCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTCAGCACAGAGTTCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | AGTGAACTCTGTGCTGACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGACTGTCTGGATCAGACTaGAAGAGAGACTCCAATACA | + |
|
Preference number: 4 (lower is better) Translates to: SELCADIRIRIVSLENSRLSGSD*KRDSNT Trigger: TGTATTGGAGTCTCTCTTCCAGTCTGATCCAGACAG...TCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTCAGCACAGAGTTCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR GCA 90 bp | CAATCTGGGACATTTTTGCTCTCTAGAGACCATTTGGCAATAAATGGAAACATTGGAGCGTCTTCCTTTTaGTGTTCTTTCTTCTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSGTFLLSRDHLAINGNIGASSF*CSFFSR Trigger: CCTTGAGAAGAAAGAACAGCAAAAGGAAGACGCTCC...AATGTTTCCATTTATTGCCAAATGGTCTCTAGAGAGCAAAAATGTCCCAGATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CCA 90 bp | CAATCTGGGACATTTTTGCTCTCTAGAGACCATTTGGCAATAAATGGAAACATTGTTCAGATCACTGTCTaGATCAGACTGGAAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSGTFLLSRDHLAINGNIVQITV*IRLEER Trigger: TCTCTCTTCCAGTCTGATCCAGACAGTGATCTGAAC...AATGTTTCCATTTATTGCCAAATGGTCTCTAGAGAGCAAAAATGTCCCAGATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| 3UTR CAA 72 bp | CACCTATTTTCTTACCTCTGTTCCTCTTATACCTACTaGATAGATGTGGGCTCTACTTGTATTTTCTATACC | + |
|
Preference number: 4 (lower is better) Translates to: HLFSYLCSSYTY*IDVGSTCIFYT Trigger: GGTATAGAAAATACAAGTAGAGCCCACATCTATCAAGTAGGTATAAGAGGAACAGAGGTAAGAAAATAGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| 3UTR CAA 72 bp | TTCCTCTTATACCTACTTGATAGATGTGGGCTCTACTaGTATTTTCTATACCTACTTCTAAGTGTAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLLYLLDRCGLY*YFLYLLLSVKC Trigger: GCACTTTACACTTAGAAGTAGGTATAGAAAATACAAGTAGAGCCCACATCTATCAAGTAGGTATAAGAGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| 3UTR CAA 72 bp | TCCCAATCTGGGACATTTTTGCTCTCTAGAGACCATTaGGCAATAAATGGAAACATTTTTGTTTGTCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: SQSGTFLLSRDH*AINGNIFVCQQ Trigger: TTGTTGACAAACAAAAATGTTTCCATTTATTGCCAAATGGTCTCTAGAGAGCAAAAATGTCCCAGATTGGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS TCA 90 bp | CCTGGGTGCGGGCAGCCGTTCGGGGAGCCCTGTTTCGGGCGGTGCTaGCAGGGGAGGAAGCCATCCGGAGAGTGTCCATGGCCCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: PGCGQPFGEPCFGRC*QGRKPSGECPWPSS Trigger: AGATGAGGGCCATGGACACTCTCCGGATGGCTTCCTCCCCTGTCAGCACCGCCCGAAACAGGGCTCCCCGAACGGCTGCCCGCACCCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS GCA 90 bp | CTCTCTGCGCTCCATGATCTCCTGATAGAGGGGCAGGTAGACGTGTaGCGGCACAGGCTGGGCCCGGAACTGCCGATGGCACTCCGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSALHDLLIEGQVDV*RHRLGPELPMALRL Trigger: GAGGCGGAGTGCCATCGGCAGTTCCGGGCCCAGCCTGTGCCGGCACACGTCTACCTGCCCCTCTATCAGGAGATCATGGAGCGCAGAGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS GCA 90 bp | GGCTGGGCCCGGAACTGCCGATGGCACTCCGCCTCTTCCTCGCCCTaGTTCTGGGCCTGTAGCCTTTCCTGCTCAAAAGAGGCAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GWARNCRWHSASSSP*FWACSLSCSKEAGE Trigger: CTCACCTGCCTCTTTTGAGCAGGAAAGGCTACAGGCCCAGAAGCAGGGCGAGGAAGAGGCGGAGTGCCATCGGCAGTTCCGGGCCCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 90 bp | GCCCGGAACTGCCGATGGCACTCCGCCTCTTCCTCGCCCTGCTTCTaGGCCTGTAGCCTTTCCTGCTCAAAAGAGGCAGGTGAGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ARNCRWHSASSSPCF*ACSLSCSKEAGEAS Trigger: GCTGGCCTCACCTGCCTCTTTTGAGCAGGAAAGGCTACAGGCCCAGAAGCAGGGCGAGGAAGAGGCGGAGTGCCATCGGCAGTTCCGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS TCA 90 bp | TTCTCTTCCGAATCCCAGCGCGCCTCCTTGCCTCTCTGCGCTCCATaGTCTCCTGATAGAGGGGCAGGTAGACGTGTGCCGGCACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FSSESQRASLPLCAP*SPDRGAGRRVPAQA Trigger: AGCCTGTGCCGGCACACGTCTACCTGCCCCTCTATCAGGAGATCATGGAGCGCAGAGAGGCAAGGAGGCGCGCTGGGATTCGGAAGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS GCA 90 bp | TCAGAGGGAAGGCTAGTCATGGAGCTGCAGCGCCTCATGGAGCCATaGCTAAGAGATGGAGGGTCCTGGACCTGTGGCTTCCCCCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SEGRLVMELQRLMEP*LRDGGSWTCGFPLL Trigger: GAGCAGGGGGAAGCCACAGGTCCAGGACCCTCCATCTCTTAGGCATGGCTCCATGAGGCGCTGCAGCTCCATGACTAGCCTTCCCTCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 90 bp | GAGCTGCAGCGCCTCATGGAGCCATGCCTAAGAGATGGAGGGTCCTaGACCTGTGGCTTCCCCCTGCTCTTGTCTTGGAAGAAGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ELQRLMEPCLRDGGS*TCGFPLLLSWKKLS Trigger: GGAGAGCTTCTTCCAAGACAAGAGCAGGGGGAAGCCACAGGTCCAGGACCCTCCATCTCTTAGGCATGGCTCCATGAGGCGCTGCAGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS TCA 90 bp | TGCCCAAGAGCAAACACTTCTGTGCTGGGAGGGAGGCCCAGAGTCTaGGGTTGGCAGGATCCGAGCCTTGGGAATGTCAGAGGGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CPRANTSVLGGRPRV*GWQDPSLGNVRGKA Trigger: AGCCTTCCCTCTGACATTCCCAAGGCTCGGATCCTGCCAACCTCAGACTCTGGGCCTCCCTCCCAGCACAGAAGTGTTTGCTCTTGGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS TCA 90 bp | TCTTCCGGGCCTCACGCAGTGTCATGCGGAATGGCTGAGGGACGGTaGTGGAAGATGCCCAAGAGCAAACACTTCTGTGCTGGGAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSGPHAVSCGMAEGR*WKMPKSKHFCAGRE Trigger: CTCCCTCCCAGCACAGAAGTGTTTGCTCTTGGGCATCTTCCATCACCGTCCCTCAGCCATTCCGCATGACACTGCGTGAGGCCCGGAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS TCA 90 bp | CACTGGGCCTTCTTCCGGGCCTCACGCAGTGTCATGCGGAATGGCTaGGGGACGGTGATGGAAGATGCCCAAGAGCAAACACTTCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HWAFFRASRSVMRNG*GTVMEDAQEQTLLC Trigger: GCACAGAAGTGTTTGCTCTTGGGCATCTTCCATCACCGTCCCTCAGCCATTCCGCATGACACTGCGTGAGGCCCGGAAGAAGGCCCAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS GCA 90 bp | CTCACGCAGTGTCATGCGGAATGGCTGAGGGACGGTGATGGAAGATaGCCAAGAGCAAACACTTCTGTGCTGGGAGGGAGGCCCAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LTQCHAEWLRDGDGR*PRANTSVLGGRPRV Trigger: GACTCTGGGCCTCCCTCCCAGCACAGAAGTGTTTGCTCTTGGGCATCTTCCATCACCGTCCCTCAGCCATTCCGCATGACACTGCGTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 90 bp | CAGCCACTGGGCCTTCTTCCGGGCCTCACGCAGTGTCATGCGGAATaGCTGAGGGACGGTGATGGAAGATGCCCAAGAGCAAACACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QPLGLLPGLTQCHAE*LRDGDGRCPRANTS Trigger: AGAAGTGTTTGCTCTTGGGCATCTTCCATCACCGTCCCTCAGCCATTCCGCATGACACTGCGTGAGGCCCGGAAGAAGGCCCAGTGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS TCA 90 bp | AGACCACTCAGAGAACGACTCCTTGGCAGGGGAGTAGCTGTTGGCTaGGGGGACTTCTTCCCTCCACCAGCGGTAGCAGCATCACAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RPLRERLLGRGVAVG*GDFFPPPAVAASQD Trigger: ATCCTGTGATGCTGCTACCGCTGGTGGAGGGAAGAAGTCCCCTCAGCCAACAGCTACTCCCCTGCCAAGGAGTCGTTCTCTGAGTGGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS GCA 90 bp | GGAGAGAAGGAGTTCCTTTCTCTTCCGAATCCCAGCGCGCCTCCTTaGCTCTCTGCGCTCCATGATCTCCTGATAGAGGGGCAGGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GEKEFLSLPNPSAPP*LSALHDLLIEGQVD Trigger: GTCTACCTGCCCCTCTATCAGGAGATCATGGAGCGCAGAGAGGCAAGGAGGCGCGCTGGGATTCGGAAGAGAAAGGAACTCCTTCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 90 bp | GCGCCTCATGGAGCCATGCCTAAGAGATGGAGGGTCCTGGACCTGTaGCTTCCCCCTGCTCTTGTCTTGGAAGAAGCTCTCCAAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: APHGAMPKRWRVLDL*LPPALVLEEALQVF Trigger: GAAGACTTGGAGAGCTTCTTCCAAGACAAGAGCAGGGGGAAGCCACAGGTCCAGGACCCTCCATCTCTTAGGCATGGCTCCATGAGGCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS TCA 90 bp | CCATCCGGAGAGTGTCCATGGCCCTCATCTGGATTCGGATTTTCCTaGGGAGCTCCGCTTCCTGGAGTTTGTCGCCAAGGGCTGGTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: PSGECPWPSSGFGFS*GAPLPGVCRQGLVL Trigger: TAGAACCAGCCCTTGGCGACAAACTCCAGGAAGCGGAGCTCCTCAGGAAAATCCGAATCCAGATGAGGGCCATGGACACTCTCCGGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS GCA 90 bp | CTCCTCCAGGCCGGCCTGCTTCAGGGCGTCCCTATAGCGCTCTTCTaGTTCTTTCCTGGCGAGGGCCTTGGTAACTTGTTCAAAGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: LLQAGLLQGVPIALF*FFPGEGLGNLFKEI Trigger: TATCTCTTTGAACAAGTTACCAAGGCCCTCGCCAGGAAAGAAGCAGAAGAGCGCTATAGGGACGCCCTGAAGCAGGCCGGCCTGGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 90 bp | GAGTCGGAAGTAGAATCTGTGTCCTCCTCCGGGCTGAGGAACTCATaGAGTTTGCCAGCTCTGGGCAAAACCAGCCCTTCTCCAAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: ESEVESVSSSGLRNS*SLPALGKTSPSPNC Trigger: GCAGTTTGGAGAAGGGCTGGTTTTGCCCAGAGCTGGCAAACTCCATGAGTTCCTCAGCCCGGAGGAGGACACAGATTCTACTTCCGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS TCA 90 bp | CAAAACCAGCCCTTCTCCAAACTGCTCATCTTCTGGCTCAGTGTCTaGGGAGGACGACTTGGGAGGAAATATCTCACGGCTCCACTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: QNQPFSKLLIFWLSV*GGRLGRKYLTAPLG Trigger: GCCGAGTGGAGCCGTGAGATATTTCCTCCCAAGTCGTCCTCCTCAGACACTGAGCCAGAAGATGAGCAGTTTGGAGAAGGGCTGGTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 90 bp | GAGAGACTCCAATACATCCCACCGGCCTCTCTGCTTCGGAACCTGTaGGGTTCTATAAAAGCTCCCCGTGGAGTCGGAAGTAGAATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ERLQYIPPASLLRNL*GSIKAPRGVGSRIC Trigger: ACAGATTCTACTTCCGACTCCACGGGGAGCTTTTATAGAACCCCACAGGTTCCGAAGCAGAGAGGCCGGTGGGATGTATTGGAGTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 90 bp | TCTTCCTCATCCTCAGCGTCGTTCAGATCACTGTCTGGATCAGACTaGAAGAGAGACTCCAATACATCCCACCGGCCTCTCTGCTTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSASFRSLSGSD*KRDSNTSHRPLCFG Trigger: TCCGAAGCAGAGAGGCCGGTGGGATGTATTGGAGTCTCTCTTCCAGTCTGATCCAGACAGTGATCTGAACGACGCTGAGGATGAGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 90 bp | GCTCTCCAAGTCTTCCTCATCCTCAGCGTCGTTCAGATCACTGTCTaGATCAGACTGGAAGAGAGACTCCAATACATCCCACCGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALQVFLILSVVQITV*IRLEERLQYIPPAS Trigger: AGAGGCCGGTGGGATGTATTGGAGTCTCTCTTCCAGTCTGATCCAGACAGTGATCTGAACGACGCTGAGGATGAGGAAGACTTGGAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS GCA 90 bp | GACATTCGGACTGCAGATTCCCGCTTCCTGGTAGCATCAGTGATGTaGACAGGGAGAGTGTTGGCAGAAAAAGAAGCGAGACCACTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: DIRTADSRFLVASVM*TGRVLAEKEARPLR Trigger: TCTGAGTGGTCTCGCTTCTTTTTCTGCCAACACTCTCCCTGTGCACATCACTGATGCTACCAGGAAGCGGGAATCTGCAGTCCGAATGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 90 bp | CTTTGGGGAGACCTTGGTCTGAGCCACAGCAGCCGAGTCTCTCTGTaGAGCGTCTTCCTTTTGCTGTTCTTTCTTCTCAAGGAAGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LWGDLGLSHSSRVSL*SVFLLLFFLLKEAE Trigger: TTCAGCTTCCTTGAGAAGAAAGAACAGCAAAAGGAAGACGCTCCACAGAGAGACTCGGCTGCTGTGGCTCAGACCAAGGTCTCCCCAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS-3UTR CAA 90 bp | AAGAGGGTGAGGAAGAAAACATCCTATAGGGGGCTGGAGAGATGGCTCAGTGGTTCTGAGGAGGACGACTaGGGAGGAAATATCTCACGG | + |
|
Preference number: 5 (lower is better) Translates to: KRVRKKTSYRGLERWLSGSEEDD*GGNISR Trigger: CCGTGAGATATTTCCTCCCAAGTCGTCCTCCTCAGA...ACCACTGAGCCATCTCTCCAGCCCCCTATAGGATGTTTTCTTCCTCACCCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS TCA 90 bp | TTCTTCCCTCCACCAGCGGTAGCAGCATCACAGGATCGTGGAGTGTaGCTCAGGTTGGCAGTTCTTAGCAAGAAGGGCTTATTTCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FFPPPAVAASQDRGV*LRLAVLSKKGLFLV Trigger: AACCAGAAATAAGCCCTTCTTGCTAAGAACTGCCAACCTGAGTCACACTCCACGATCCTGTGATGCTGCTACCGCTGGTGGAGGGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 90 bp | CGGTTCTCTTTAAGCTTCGCTTTGAACACCTCTTCCAGGCTTTTGTaGGGATCCATGGCCTTGGCCCTCAAGGTCACTGATTTAGACATG | + |
|
Preference number: 5 (lower is better) Translates to: RFSLSFALNTSSRLL*GSMALALKVTDLDM Trigger: CATGTCTAAATCAGTGACCTTGAGGGCCAAGGCCATGGATCCCCACAAAAGCCTGGAAGAGGTGTTCAAAGCGAAGCTTAAAGAGAACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS-3UTR CAA 90 bp | CTTTCTACAGGAGTGCTTCCCAATCTGGGACATTTTTGCTCTCTAGAGACCATTCCCCCTGCTCTTGTCTaGGAAGAAGCTCTCCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSTGVLPNLGHFCSLETIPPALV*EEALQV Trigger: GACTTGGAGAGCTTCTTCCAAGACAAGAGCAGGGGG...AATGGTCTCTAGAGAGCAAAAATGTCCCAGATTGGGAAGCACTCCTGTAGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS-3UTR CAA 90 bp | AAACATCCTATAGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTGGAGCGTCTTCCTTTaGCTGTTCTTTCTTCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KHPIGGWRDGSVVKSTDCWSVFL*LFFLLK Trigger: CTTGAGAAGAAAGAACAGCAAAAGGAAGACGCTCCA...GCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCCTATAGGATGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS-3UTR CAA 90 bp | TTTCTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACATGGGGATCCATGGCCTaGGCCCTCAAGGTCACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: FLKLPVCAFYRSASQSGTWGSMA*ALKVTD Trigger: ATCAGTGACCTTGAGGGCCAAGGCCATGGATCCCCA...TGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS TCA 90 bp | TCTGTGGAGCGTCTTCCTTTTGCTGTTCTTTCTTCTCAAGGAAGCTaGAGGGCTTCAAGGAGGAGAGAAGGAGTTCCTTTCTCTTCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: SVERLPFAVLSSQGS*RASRRREGVPFSSE Trigger: TTCGGAAGAGAAAGGAACTCCTTCTCTCCTCCTTGAAGCCCTTCAGCTTCCTTGAGAAGAAAGAACAGCAAAAGGAAGACGCTCCACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS-3UTR CAA 90 bp | AAGCCGATGAGAATGTATTTAGTCTGGCTGTCCTGGATTTCTGTTTCCTTATTGGGCTTCCCCCTGCTCTaGTCTTGGAAGAAGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KPMRMYLVWLSWISVSLLGFPLL*SWKKLS Trigger: GGAGAGCTTCTTCCAAGACAAGAGCAGGGGGAAGCC...CAATAAGGAAACAGAAATCCAGGACAGCCAGACTAAATACATTCTCATCGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS-3UTR CAA 90 bp | ATAGTGTCTTTAGAGAACAGTAGAAAAGAACTGCCGCTCTGCATTTGCTATCGACCCCCTGCTCTTGTCTaGGAAGAAGCTCTCCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: IVSLENSRKELPLCICYRPPALV*EEALQV Trigger: GACTTGGAGAGCTTCTTCCAAGACAAGAGCAGGGGG...TCGATAGCAAATGCAGAGCGGCAGTTCTTTTCTACTGTTCTCTAAAGACACTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS-3UTR CAA 90 bp | TCCCAAACCCTAACAGATGACTCTAAACTCAAGCTCCTCCACACTTGGTTGCTTGGTTCTAGAATGGACTaGGGGATCTTCCTAGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SQTLTDDSKLKLLHTWLLGSRMD*GIFLEV Trigger: CACTTCTAGGAAGATCCCCAAGTCCATTCTAGAACC...AAGCAACCAAGTGTGGAGGAGCTTGAGTTTAGAGTCATCTGTTAGGGTTTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS-3UTR CAA 90 bp | AGTGAACTCTGTGCTGACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGATGGGGATCCATGGCCTaGGCCCTCAAGGTCACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SELCADIRIRIVSLENSRWGSMA*ALKVTD Trigger: ATCAGTGACCTTGAGGGCCAAGGCCATGGATCCCCA...TCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTCAGCACAGAGTTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS-3UTR CAA 90 bp | AAGCCGATGAGAATGTATTTAGTCTGGCTGTCCTGGATTTCTGTTTCCTTATTGACCTCTTCCAGGCTTTaGTGGGGATCCATGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KPMRMYLVWLSWISVSLLTSSRL*WGSMAL Trigger: CAAGGCCATGGATCCCCACAAAAGCCTGGAAGAGGT...CAATAAGGAAACAGAAATCCAGGACAGCCAGACTAAATACATTCTCATCGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS-3UTR CAA 90 bp | GCAATTGTTTTTCTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAAACCTCTTCCAGGCTTTaGTGGGGATCCATGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AIVFLKLPVCAFYRSASQTSSRL*WGSMAL Trigger: CAAGGCCATGGATCCCCACAAAAGCCTGGAAGAGGT...TTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAGAAAAACAATTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS-3UTR CAA 90 bp | AAGAGGGTGAGGAAGAAAACATCCTATAGGGGGCTGGAGAGATGGCTCAGTGGTCAAAGAGATAGGGCCTaGTTTGTATTCTTTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KRVRKKTSYRGLERWLSGQRDRA*FVFFSS Trigger: TGAAGAAAAGAATACAAACAAGGCCCTATCTCTTTG...ACCACTGAGCCATCTCTCCAGCCCCCTATAGGATGTTTTCTTCCTCACCCTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS-3UTR CAA 90 bp | TTTCTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATCTGGGACAGAGGGCCTTGGTAACTaGTTCAAAGAGATAGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FLKLPVCAFYRSASQSGTEGLGN*FKEIGP Trigger: AGGCCCTATCTCTTTGAACAAGTTACCAAGGCCCTC...TGTCCCAGATTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS-3UTR CAA 90 bp | GACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGAAAAGAACTGCCGCTCTGCACAGGGAGAGTGTaGGCAGAAAAAGAAGCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: DIRIRIVSLENSRKELPLCTGRV*AEKEAR Trigger: TCTCGCTTCTTTTTCTGCCAACACTCTCCCTGTGCA...GAGCGGCAGTTCTTTTCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CAA 90 bp | ATAGTGTCTTTAGAGAACAGTAGAAAAGAACTGCCGCTCTGCATTTGCTATCGAGAGGGCCTTGGTAACTaGTTCAAAGAGATAGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: IVSLENSRKELPLCICYREGLGN*FKEIGP Trigger: AGGCCCTATCTCTTTGAACAAGTTACCAAGGCCCTC...TCGATAGCAAATGCAGAGCGGCAGTTCTTTTCTACTGTTCTCTAAAGACACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CAA 90 bp | TGTGGGCTCTACTTGTATTTTCTATACCTACTTCTAAGTGTAAAGTGCAAAGCATCTGAGGAGGACGACTaGGGAGGAAATATCTCACGG | + |
|
Preference number: 5 (lower is better) Translates to: CGLYLYFLYLLLSVKCKASEEDD*GGNISR Trigger: CCGTGAGATATTTCCTCCCAAGTCGTCCTCCTCAGA...TGCTTTGCACTTTACACTTAGAAGTAGGTATAGAAAATACAAGTAGAGCCCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CAA 90 bp | GACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGAAAAGAACTGCCGCTCGGTTCTAGAATGGACTaGGGGATCTTCCTAGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: DIRIRIVSLENSRKELPLGSRMD*GIFLEV Trigger: CACTTCTAGGAAGATCCCCAAGTCCATTCTAGAACC...GAGCGGCAGTTCTTTTCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CAA 90 bp | AGTGAACTCTGTGCTGACATACGTATTCGAATAGTGTCTTTAGAGAACAGTAGATGCACAGGGAGAGTGTaGGCAGAAAAAGAAGCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SELCADIRIRIVSLENSRCTGRV*AEKEAR Trigger: TCTCGCTTCTTTTTCTGCCAACACTCTCCCTGTGCA...TCTACTGTTCTCTAAAGACACTATTCGAATACGTATGTCAGCACAGAGTTCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CAA 90 bp | GCAATTGTTTTTCTAAAATTACCAGTCTGTGCTTTCTACAGGAGTGCTTCCCAATGGAGCGTCTTCCTTTaGCTGTTCTTTCTTCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: AIVFLKLPVCAFYRSASQWSVFL*LFFLLK Trigger: CTTGAGAAGAAAGAACAGCAAAAGGAAGACGCTCCA...TTGGGAAGCACTCCTGTAGAAAGCACAGACTGGTAATTTTAGAAAAACAATTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
||
| CDS-3UTR CAA 90 bp | TTGCAGATGTGGGCTGAGAATCATGTTTTATTTCACACACAGTATTCCTATGTTCAAAGAGATAGGGCCTaGTTTGTATTCTTTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LQMWAENHVLFHTQYSYVQRDRA*FVFFSS Trigger: TGAAGAAAAGAATACAAACAAGGCCCTATCTCTTTG...AACATAGGAATACTGTGTGTGAAATAAAACATGATTCTCAGCCCACATCTGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS TCA 72 bp | GGGCAGCCGTTCGGGGAGCCCTGTTTCGGGCGGTGCTaGCAGGGGAGGAAGCCATCCGGAGAGTGTCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: GQPFGEPCFGRC*QGRKPSGECPW Trigger: CCATGGACACTCTCCGGATGGCTTCCTCCCCTGTCAGCACCGCCCGAAACAGGGCTCCCCGAACGGCTGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS GCA 72 bp | ACTCAGTCTGTAGAAAGCTCAGCTTCTCCTCCTGGGTaGGGGCAGCCGTTCGGGGAGCCCTGTTTCGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: TQSVESSASPPG*GQPFGEPCFGR Trigger: CCGCCCGAAACAGGGCTCCCCGAACGGCTGCCCGCACCCAGGAGGAGAAGCTGAGCTTTCTACAGACTGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CAA 90 bp | TGCTGGGAGGGAGGCCCAGAGTCTGAGGTTGGCAGGATCCGAGCCTaGGGAATGTCAGAGGGAAGGCTAGTCATGGAGCTGCAGCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: CWEGGPESEVGRIRA*GMSEGRLVMELQRL Trigger: GAGGCGCTGCAGCTCCATGACTAGCCTTCCCTCTGACATTCCCAAGGCTCGGATCCTGCCAACCTCAGACTCTGGGCCTCCCTCCCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS TCA 72 bp | GAATCCCAGCGCGCCTCCTTGCCTCTCTGCGCTCCATaGTCTCCTGATAGAGGGGCAGGTAGACGTGTGCCG | + |
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Preference number: 6 (lower is better) Translates to: ESQRASLPLCAP*SPDRGAGRRVP Trigger: CGGCACACGTCTACCTGCCCCTCTATCAGGAGATCATGGAGCGCAGAGAGGCAAGGAGGCGCGCTGGGATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 72 bp | GGAGCTGCAGCGCCTCATGGAGCCATGCCTAAGAGATaGAGGGTCCTGGACCTGTGGCTTCCCCCTGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: GAAAPHGAMPKR*RVLDLWLPPAL Trigger: AAGAGCAGGGGGAAGCCACAGGTCCAGGACCCTCCATCTCTTAGGCATGGCTCCATGAGGCGCTGCAGCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 72 bp | CTTTCCTGCTCAAAAGAGGCAGGTGAGGCCAGCCACTaGGCCTTCTTCCGGGCCTCACGCAGTGTCATGCGG | + |
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Preference number: 6 (lower is better) Translates to: LSCSKEAGEASH*AFFRASRSVMR Trigger: CCGCATGACACTGCGTGAGGCCCGGAAGAAGGCCCAGTGGCTGGCCTCACCTGCCTCTTTTGAGCAGGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS GCA 72 bp | CGGAACTGCCGATGGCACTCCGCCTCTTCCTCGCCCTaGTTCTGGGCCTGTAGCCTTTCCTGCTCAAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: RNCRWHSASSSP*FWACSLSCSKE Trigger: CTCTTTTGAGCAGGAAAGGCTACAGGCCCAGAAGCAGGGCGAGGAAGAGGCGGAGTGCCATCGGCAGTTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 72 bp | GGCCTTCTTCCGGGCCTCACGCAGTGTCATGCGGAATaGCTGAGGGACGGTGATGGAAGATGCCCAAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: GLLPGLTQCHAE*LRDGDGRCPRA Trigger: TGCTCTTGGGCATCTTCCATCACCGTCCCTCAGCCATTCCGCATGACACTGCGTGAGGCCCGGAAGAAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 72 bp | TGCCGATGGCACTCCGCCTCTTCCTCGCCCTGCTTCTaGGCCTGTAGCCTTTCCTGCTCAAAAGAGGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: CRWHSASSSPCF*ACSLSCSKEAG Trigger: ACCTGCCTCTTTTGAGCAGGAAAGGCTACAGGCCCAGAAGCAGGGCGAGGAAGAGGCGGAGTGCCATCGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS TCA 72 bp | AGAGAACGACTCCTTGGCAGGGGAGTAGCTGTTGGCTaGGGGGACTTCTTCCCTCCACCAGCGGTAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RERLLGRGVAVG*GDFFPPPAVAA Trigger: TGCTGCTACCGCTGGTGGAGGGAAGAAGTCCCCTCAGCCAACAGCTACTCCCCTGCCAAGGAGTCGTTCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS GCA 72 bp | AGGCTAGTCATGGAGCTGCAGCGCCTCATGGAGCCATaGCTAAGAGATGGAGGGTCCTGGACCTGTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RLVMELQRLMEP*LRDGGSWTCGF Trigger: GAAGCCACAGGTCCAGGACCCTCCATCTCTTAGGCATGGCTCCATGAGGCGCTGCAGCTCCATGACTAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS GCA 72 bp | GCCGGCCTGCTTCAGGGCGTCCCTATAGCGCTCTTCTaGTTCTTTCCTGGCGAGGGCCTTGGTAACTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: AGLLQGVPIALF*FFPGEGLGNLF Trigger: GAACAAGTTACCAAGGCCCTCGCCAGGAAAGAAGCAGAAGAGCGCTATAGGGACGCCCTGAAGCAGGCCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 72 bp | CGCCTCATGGAGCCATGCCTAAGAGATGGAGGGTCCTaGACCTGTGGCTTCCCCCTGCTCTTGTCTTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RLMEPCLRDGGS*TCGFPLLLSWK Trigger: CTTCCAAGACAAGAGCAGGGGGAAGCCACAGGTCCAGGACCCTCCATCTCTTAGGCATGGCTCCATGAGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS GCA 72 bp | GAGTTCCTTTCTCTTCCGAATCCCAGCGCGCCTCCTTaGCTCTCTGCGCTCCATGATCTCCTGATAGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: EFLSLPNPSAPP*LSALHDLLIEG Trigger: CCCCTCTATCAGGAGATCATGGAGCGCAGAGAGGCAAGGAGGCGCGCTGGGATTCGGAAGAGAAAGGAACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS TCA 72 bp | TTCTTCCGGGCCTCACGCAGTGTCATGCGGAATGGCTaGGGGACGGTGATGGAAGATGCCCAAGAGCAAACA | + |
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Preference number: 6 (lower is better) Translates to: FFRASRSVMRNG*GTVMEDAQEQT Trigger: TGTTTGCTCTTGGGCATCTTCCATCACCGTCCCTCAGCCATTCCGCATGACACTGCGTGAGGCCCGGAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 72 bp | GTGATGGAAGATGCCCAAGAGCAAACACTTCTGTGCTaGGAGGGAGGCCCAGAGTCTGAGGTTGGCAGGATC | + |
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Preference number: 6 (lower is better) Translates to: VMEDAQEQTLLC*EGGPESEVGRI Trigger: GATCCTGCCAACCTCAGACTCTGGGCCTCCCTCCCAGCACAGAAGTGTTTGCTCTTGGGCATCTTCCATCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CAA 72 bp | TGCTCATCTTCTGGCTCAGTGTCTGAGGAGGACGACTaGGGAGGAAATATCTCACGGCTCCACTCGGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: CSSSGSVSEEDD*GGNISRLHSAH Trigger: GTGCGCCGAGTGGAGCCGTGAGATATTTCCTCCCAAGTCGTCCTCCTCAGACACTGAGCCAGAAGATGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CAA 72 bp | TCTGTGTCCTCCTCCGGGCTGAGGAACTCATGGAGTTaGCCAGCTCTGGGCAAAACCAGCCCTTCTCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: SVSSSGLRNSWS*PALGKTSPSPN Trigger: GTTTGGAGAAGGGCTGGTTTTGCCCAGAGCTGGCAAACTCCATGAGTTCCTCAGCCCGGAGGAGGACACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS TCA 72 bp | CCTCACGCAGTGTCATGCGGAATGGCTGAGGGACGGTaGTGGAAGATGCCCAAGAGCAAACACTTCTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: PHAVSCGMAEGR*WKMPKSKHFCA Trigger: AGCACAGAAGTGTTTGCTCTTGGGCATCTTCCATCACCGTCCCTCAGCCATTCCGCATGACACTGCGTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 72 bp | GTAGAATCTGTGTCCTCCTCCGGGCTGAGGAACTCATaGAGTTTGCCAGCTCTGGGCAAAACCAGCCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VESVSSSGLRNS*SLPALGKTSPS Trigger: AGAAGGGCTGGTTTTGCCCAGAGCTGGCAAACTCCATGAGTTCCTCAGCCCGGAGGAGGACACAGATTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 72 bp | CAATACATCCCACCGGCCTCTCTGCTTCGGAACCTGTaGGGTTCTATAAAAGCTCCCCGTGGAGTCGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: QYIPPASLLRNL*GSIKAPRGVGS Trigger: ACTTCCGACTCCACGGGGAGCTTTTATAGAACCCCACAGGTTCCGAAGCAGAGAGGCCGGTGGGATGTATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 72 bp | AATGGACTTGGGGATCTTCCTAGAAGTGGCCTTCTTTaGGGAGACCTTGGTCTGAGCCACAGCAGCCGAGTC | + |
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Preference number: 6 (lower is better) Translates to: NGLGDLPRSGLL*GDLGLSHSSRV Trigger: GACTCGGCTGCTGTGGCTCAGACCAAGGTCTCCCCAAAGAAGGCCACTTCTAGGAAGATCCCCAAGTCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 72 bp | TCAGGTTGGCAGTTCTTAGCAAGAAGGGCTTATTTCTaGTTGTCTCCCGGGTCTCCCTCCTCTCGGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: SGWQFLARRAYF*LSPGSPSSRQL Trigger: GAGCTGCCGAGAGGAGGGAGACCCGGGAGACAACCAGAAATAAGCCCTTCTTGCTAAGAACTGCCAACCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CAA 90 bp | TCCGCTTCCTGGAGTTTGTCGCCAAGGGCTGGTTCTAGAATGGACTaGGGGATCTTCCTAGAAGTGGCCTTCTTTGGGGAGACCTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: SASWSLSPRAGSRMD*GIFLEVAFFGETLV Trigger: GACCAAGGTCTCCCCAAAGAAGGCCACTTCTAGGAAGATCCCCAAGTCCATTCTAGAACCAGCCCTTGGCGACAAACTCCAGGAAGCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS TCA 72 bp | CCACCAGCGGTAGCAGCATCACAGGATCGTGGAGTGTaGCTCAGGTTGGCAGTTCTTAGCAAGAAGGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: PPAVAASQDRGV*LRLAVLSKKGL Trigger: TAAGCCCTTCTTGCTAAGAACTGCCAACCTGAGTCACACTCCACGATCCTGTGATGCTGCTACCGCTGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 72 bp | TCCTCAGCGTCGTTCAGATCACTGTCTGGATCAGACTaGAAGAGAGACTCCAATACATCCCACCGGCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SSASFRSLSGSD*KRDSNTSHRPL Trigger: GAGAGGCCGGTGGGATGTATTGGAGTCTCTCTTCCAGTCTGATCCAGACAGTGATCTGAACGACGCTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CAA 90 bp | GAAGTAGAATCTGTGTCCTCCTCCGGGCTGAGGAACTCATGGAGTTaGCCAGCTCTGGGCAAAACCAGCCCTTCTCCAAACTGCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: EVESVSSSGLRNSWS*PALGKTSPSPNCSS Trigger: AGATGAGCAGTTTGGAGAAGGGCTGGTTTTGCCCAGAGCTGGCAAACTCCATGAGTTCCTCAGCCCGGAGGAGGACACAGATTCTACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CAA 90 bp | GGTCTGAGCCACAGCAGCCGAGTCTCTCTGTGGAGCGTCTTCCTTTaGCTGTTCTTTCTTCTCAAGGAAGCTGAAGGGCTTCAAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: GLSHSSRVSLWSVFL*LFFLLKEAEGLQGG Trigger: TCCTCCTTGAAGCCCTTCAGCTTCCTTGAGAAGAAAGAACAGCAAAAGGAAGACGCTCCACAGAGAGACTCGGCTGCTGTGGCTCAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS TCA 72 bp | CCCTTCTCCAAACTGCTCATCTTCTGGCTCAGTGTCTaGGGAGGACGACTTGGGAGGAAATATCTCACGGCT | + |
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Preference number: 6 (lower is better) Translates to: PFSKLLIFWLSV*GGRLGRKYLTA Trigger: AGCCGTGAGATATTTCCTCCCAAGTCGTCCTCCTCAGACACTGAGCCAGAAGATGAGCAGTTTGGAGAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 72 bp | GACCTTGGTCTGAGCCACAGCAGCCGAGTCTCTCTGTaGAGCGTCTTCCTTTTGCTGTTCTTTCTTCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: DLGLSHSSRVSL*SVFLLLFFLLK Trigger: CTTGAGAAGAAAGAACAGCAAAAGGAAGACGCTCCACAGAGAGACTCGGCTGCTGTGGCTCAGACCAAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CCA 72 bp | ATCTGGATTCGGATTTTCCTGAGGAGCTCCGCTTCCTaGAGTTTGTCGCCAAGGGCTGGTTCTAGAATGGAC | + |
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Preference number: 6 (lower is better) Translates to: IWIRIFLRSSAS*SLSPRAGSRMD Trigger: GTCCATTCTAGAACCAGCCCTTGGCGACAAACTCCAGGAAGCGGAGCTCCTCAGGAAAATCCGAATCCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CAA 72 bp | TGGAGTTTGTCGCCAAGGGCTGGTTCTAGAATGGACTaGGGGATCTTCCTAGAAGTGGCCTTCTTTGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: WSLSPRAGSRMD*GIFLEVAFFGE Trigger: CTCCCCAAAGAAGGCCACTTCTAGGAAGATCCCCAAGTCCATTCTAGAACCAGCCCTTGGCGACAAACTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CAA 90 bp | TGTGACTCAGGTTGGCAGTTCTTAGCAAGAAGGGCTTATTTCTGGTaGTCTCCCGGGTCTCCCTCCTCTCGGCAGCTCTTTTCTGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: CDSGWQFLARRAYFW*SPGSPSSRQLFSGK Trigger: CTTTCCAGAAAAGAGCTGCCGAGAGGAGGGAGACCCGGGAGACAACCAGAAATAAGCCCTTCTTGCTAAGAACTGCCAACCTGAGTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CAA 90 bp | CTCCGGTTCTCTTTAAGCTTCGCTTTGAACACCTCTTCCAGGCTTTaGTGGGGATCCATGGCCTTGGCCCTCAAGGTCACTGATTTAGAC | + |
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Preference number: 6 (lower is better) Translates to: LRFSLSFALNTSSRL*WGSMALALKVTDLD Trigger: GTCTAAATCAGTGACCTTGAGGGCCAAGGCCATGGATCCCCACAAAAGCCTGGAAGAGGTGTTCAAAGCGAAGCTTAAAGAGAACCGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS GCA 72 bp | ACTGCAGATTCCCGCTTCCTGGTAGCATCAGTGATGTaGACAGGGAGAGTGTTGGCAGAAAAAGAAGCGAGA | + |
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Preference number: 6 (lower is better) Translates to: TADSRFLVASVM*TGRVLAEKEAR Trigger: TCTCGCTTCTTTTTCTGCCAACACTCTCCCTGTGCACATCACTGATGCTACCAGGAAGCGGGAATCTGCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CAA 72 bp | TTACGGTCATTGCTCCGGTTCTCTTTAAGCTTCGCTTaGAACACCTCTTCCAGGCTTTTGTGGGGATCCATG | + |
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Preference number: 6 (lower is better) Translates to: LRSLLRFSLSFA*NTSSRLLWGSM Trigger: CATGGATCCCCACAAAAGCCTGGAAGAGGTGTTCAAAGCGAAGCTTAAAGAGAACCGGAGCAATGACCGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS TCA 72 bp | CGTCTTCCTTTTGCTGTTCTTTCTTCTCAAGGAAGCTaGAGGGCTTCAAGGAGGAGAGAAGGAGTTCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: RLPFAVLSSQGS*RASRRREGVPF Trigger: GAAAGGAACTCCTTCTCTCCTCCTTGAAGCCCTTCAGCTTCCTTGAGAAGAAAGAACAGCAAAAGGAAGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CAA 90 bp | CCTATAGCGCTCTTCTGCTTCTTTCCTGGCGAGGGCCTTGGTAACTaGTTCAAAGAGATAGGGCCTTGTTTGTATTCTTTTCTTCATTTC | + |
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Preference number: 6 (lower is better) Translates to: PIALFCFFPGEGLGN*FKEIGPCLYSFLHF Trigger: GAAATGAAGAAAAGAATACAAACAAGGCCCTATCTCTTTGAACAAGTTACCAAGGCCCTCGCCAGGAAAGAAGCAGAAGAGCGCTATAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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| CDS CAA 72 bp | CTCTTCTGCTTCTTTCCTGGCGAGGGCCTTGGTAACTaGTTCAAAGAGATAGGGCCTTGTTTGTATTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: LFCFFPGEGLGN*FKEIGPCLYSF Trigger: AAAAGAATACAAACAAGGCCCTATCTCTTTGAACAAGTTACCAAGGCCCTCGCCAGGAAAGAAGCAGAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021659.2 ENSMUST00000065536.9 |
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