Pregenerated sensors for FAM160B2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022095Ensembl transcript IDs: ENSMUST00000022690.10
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCGCCTGCCCTGGCTGCAGCTGCGCCAGGGCTCTTGTTAGCAGCTaGCCCCGCCTGGGCGCAGAGCATACTTTGGGCCTCTGCCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: LACPGCSCARALVSS*PRLGAEHTLGLCQE Trigger: CTCCTGGCAGAGGCCCAAAGTATGCTCTGCGCCCAGGCGGGGGCAGCTGCTAACAAGAGCCCTGGCGCAGCTGCAGCCAGGGCAGGCGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR GCA 90 bp | TGGAGCTGGAGCTGGAGCCTGGCACCCAGCTCCAAGGCTCTCGCCTaGCCTGGCTGCAGCTGCGCCAGGGCTCTTGTTAGCAGCTGCCCC | + |
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Preference number: 1 (lower is better) Translates to: WSWSWSLAPSSKALA*PGCSCARALVSSCP Trigger: GGGGCAGCTGCTAACAAGAGCCCTGGCGCAGCTGCAGCCAGGGCAGGCGAGAGCCTTGGAGCTGGGTGCCAGGCTCCAGCTCCAGCTCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR CCA 90 bp | TGTCCTGCAGCTGAAGTCCCCGGCATGGAGGACAGAGTGGCAGCATaGCCAGGCAGGAGACTGCCCGTGGGCAGAAGTACACAGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: CPAAEVPGMEDRVAA*PGRRLPVGRSTQAG Trigger: TCCTGCCTGTGTACTTCTGCCCACGGGCAGTCTCCTGCCTGGCCATGCTGCCACTCTGTCCTCCATGCCGGGGACTTCAGCTGCAGGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR CCA 90 bp | CCCCTGGGCACTGGGCAGGATTCAGAGGGCAAGGGCCCCCATCCCTaGTCAATGACCTCTCTGCCCAGGTGTTTCGGACTTGCTGAGACG | + |
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Preference number: 1 (lower is better) Translates to: PLGTGQDSEGKGPHP*SMTSLPRCFGLAET Trigger: CGTCTCAGCAAGTCCGAAACACCTGGGCAGAGAGGTCATTGACCAGGGATGGGGGCCCTTGCCCTCTGAATCCTGCCCAGTGCCCAGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR TCA 90 bp | GCGCCGCCCGAGTGCTCTTGCAGGTTGAGACAGATTCAGGCCGGGTaGGGTAGCAGCCCCAGCCATGGAGGACATACGAAGAACAATGCC | + |
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Preference number: 1 (lower is better) Translates to: APPECSCRLRQIQAG*GSSPSHGGHTKNNA Trigger: GGCATTGTTCTTCGTATGTCCTCCATGGCTGGGGCTGCTACCTCACCCGGCCTGAATCTGTCTCAACCTGCAAGAGCACTCGGGCGGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR GCA 90 bp | GTTAGCAGCTGCCCCCGCCTGGGCGCAGAGCATACTTTGGGCCTCTaGCAGGAGGCAGTTGGGAATTTTGCAACAGCCTCCAGGAGGGTA | + |
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Preference number: 1 (lower is better) Translates to: VSSCPRLGAEHTLGL*QEAVGNFATASRRV Trigger: TACCCTCCTGGAGGCTGTTGCAAAATTCCCAACTGCCTCCTGGCAGAGGCCCAAAGTATGCTCTGCGCCCAGGCGGGGGCAGCTGCTAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR CCA 90 bp | GGGCTCTTGTTAGCAGCTGCCCCCGCCTGGGCGCAGAGCATACTTTaGGCCTCTGCCAGGAGGCAGTTGGGAATTTTGCAACAGCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: GLLLAAAPAWAQSIL*ASARRQLGILQQPP Trigger: TGGAGGCTGTTGCAAAATTCCCAACTGCCTCCTGGCAGAGGCCCAAAGTATGCTCTGCGCCCAGGCGGGGGCAGCTGCTAACAAGAGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR TCA 90 bp | CCATCCCTGGTCAATGACCTCTCTGCCCAGGTGTTTCGGACTTGCTaGGACGGGTTCAGAAGGCGCCAGAGAGGAACCAGCTGGAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: PSLVNDLSAQVFRTC*DGFRRRQRGTSWSW Trigger: CCAGCTCCAGCTGGTTCCTCTCTGGCGCCTTCTGAACCCGTCTCAGCAAGTCCGAAACACCTGGGCAGAGAGGTCATTGACCAGGGATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR CCA 90 bp | GGAGTGCATGATGTTCTTCGGAGCAGCAGAGAAGTCCTCCCCCGCTaGGAGGACTGCGGGGGATGTAGAGGTCATGGAGTTTCCTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: GVHDVLRSSREVLPR*EDCGGCRGHGVSSS Trigger: AGAGGAGGAAACTCCATGACCTCTACATCCCCCGCAGTCCTCCCAGCGGGGGAGGACTTCTCTGCTGCTCCGAAGAACATCATGCACTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR TCA 90 bp | ACACACACACACACACACACACTCACACACACACACAGGAGTGCATaGTGTTCTTCGGAGCAGCAGAGAAGTCCTCCCCCGCTGGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: THTHTHTLTHTHRSA*CSSEQQRSPPPLGG Trigger: TCCTCCCAGCGGGGGAGGACTTCTCTGCTGCTCCGAAGAACATCATGCACTCCTGTGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR GCA 90 bp | AGCCCCAGCCATGGAGGACATACGAAGAACAATGCCAGAGCTATCTaGTTGTGTCTCGGCCTAGCCTCACTAGGCTTCTGGGGTTTGGAG | + |
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Preference number: 1 (lower is better) Translates to: SPSHGGHTKNNARAI*LCLGLASLGFWGLE Trigger: CTCCAAACCCCAGAAGCCTAGTGAGGCTAGGCCGAGACACAAGCAGATAGCTCTGGCATTGTTCTTCGTATGTCCTCCATGGCTGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR GCA 90 bp | GGTCATGGAGTTTCCTCCTCTTTCATGTCACCTCCTGGCAACCTGTaGCCGGCTTCGAGAGGTGGCATGGGCAGGAAAAGGAAGCAAAAG | + |
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Preference number: 1 (lower is better) Translates to: GHGVSSSFMSPPGNL*PASRGGMGRKRKQK Trigger: CTTTTGCTTCCTTTTCCTGCCCATGCCACCTCTCGAAGCCGGGCACAGGTTGCCAGGAGGTGACATGAAAGAGGAGGAAACTCCATGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR CCA 90 bp | GCAGTTCATCTCCCTGGCCCCTGGAGTTGTCTCATGTTGTGGCCCTaGTCACAATATAGCAGAGATAGTCACGCAACACATGCAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: AVHLPGPWSCLMLWP*SQYSRDSHATHAGQ Trigger: CTGCCCTGCATGTGTTGCGTGACTATCTCTGCTATATTGTGACCAGGGCCACAACATGAGACAACTCCAGGGGCCAGGGAGATGAACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR CCA 90 bp | AGAGATAGTCACGCAACACATGCAGGGCAGCATCTAGGCGCTCACTaGCCATCCTCTAGCTCCTCTAAAAGGCTCCAAGAATACCACTGC | + |
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Preference number: 1 (lower is better) Translates to: RDSHATHAGQHLGAH*PSSSSSKRLQEYHC Trigger: GCAGTGGTATTCTTGGAGCCTTTTAGAGGAGCTAGAGGATGGCCAGTGAGCGCCTAGATGCTGCCCTGCATGTGTTGCGTGACTATCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR GCA 90 bp | TGCTGTTGTGAAGACACCATGCAAATGCCAAAGTGCATTGAGTATTaGCCAGCCTCTCAAACGAGTACAAATCTCAAGTGTAGACCCACT | + |
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Preference number: 1 (lower is better) Translates to: CCCEDTMQMPKCIEY*PASQTSTNLKCRPT Trigger: AGTGGGTCTACACTTGAGATTTGTACTCGTTTGAGAGGCTGGGCAATACTCAATGCACTTTGGCATTTGCATGGTGTCTTCACAACAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR GCA 90 bp | CCACACAATCACAATGTTTATTGCTGTGCTGTTGTGAAGACACCATaGAAATGCCAAAGTGCATTGAGTATTGCCCAGCCTCTCAAACGA | + |
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Preference number: 1 (lower is better) Translates to: PHNHNVYCCAVVKTP*KCQSALSIAQPLKR Trigger: TCGTTTGAGAGGCTGGGCAATACTCAATGCACTTTGGCATTTGCATGGTGTCTTCACAACAGCACAGCAATAAACATTGTGATTGTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR GCA 90 bp | AATCACAATGTTTATTGCTGTGCTGTTGTGAAGACACCATGCAAATaGCAAAGTGCATTGAGTATTGCCCAGCCTCTCAAACGAGTACAA | + |
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Preference number: 1 (lower is better) Translates to: NHNVYCCAVVKTPCK*QSALSIAQPLKRVQ Trigger: TTGTACTCGTTTGAGAGGCTGGGCAATACTCAATGCACTTTGGCATTTGCATGGTGTCTTCACAACAGCACAGCAATAAACATTGTGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCAGAGAAGTCCTCCCCCGCTGGGAGGACTGCGGGGGATGTAGAGGTCATGGCTCTCGCCTGCCCTaGCTGCAGCTGCGCCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: SSREVLPRWEDCGGCRGHGSRLP*LQLRQG Trigger: GCCCTGGCGCAGCTGCAGCCAGGGCAGGCGAGAGCC...ATGACCTCTACATCCCCCGCAGTCCTCCCAGCGGGGGAGGACTTCTCTGCTGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR-3UTR CCA 90 bp | GCTGCAGCTGCGCCAGGGCTCTTGTTAGCAGCTGCCCCCGCCTGGGCGCAGAGCCTGAAGTCCCCGGCATaGAGGACAGAGTGGCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: AAAAPGLLLAAAPAWAQSLKSPA*RTEWQH Trigger: ATGCTGCCACTCTGTCCTCCATGCCGGGGACTTCAG...GCTCTGCGCCCAGGCGGGGGCAGCTGCTAACAAGAGCCCTGGCGCAGCTGCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR CAA 90 bp | AGGGCTCTTGTTAGCAGCTGCCCCCGCCTGGGCGCAGAGCATACTTaGGGCCTCTGCCAGGAGGCAGTTGGGAATTTTGCAACAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: RALVSSCPRLGAEHT*GLCQEAVGNFATAS Trigger: GGAGGCTGTTGCAAAATTCCCAACTGCCTCCTGGCAGAGGCCCAAAGTATGCTCTGCGCCCAGGCGGGGGCAGCTGCTAACAAGAGCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR-3UTR TCA 90 bp | GTAATGCCTGGCGCCGCCCGAGTGCTCTTGCAGGTTGAGACAGATTCAGGCCGGGTGTTTCGGACTTGCTaGGACGGGTTCAGAAGGCGC | + |
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Preference number: 2 (lower is better) Translates to: VMPGAARVLLQVETDSGRVFRTC*DGFRRR Trigger: GCGCCTTCTGAACCCGTCTCAGCAAGTCCGAAACAC...CCGGCCTGAATCTGTCTCAACCTGCAAGAGCACTCGGGCGGCGCCAGGCATTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR-3UTR TCA 90 bp | CTTTGGGCCTCTGCCAGGAGGCAGTTGGGAATTTTGCAACAGCCTCCAGGAGGGGAGCCAGCACCTCCTTaGAACCTCAGCTCGTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: LWASARRQLGILQQPPGGEPAPP*NLSSWG Trigger: ACCCCACGAGCTGAGGTTTCAAGGAGGTGCTGGCTC...CCCTCCTGGAGGCTGTTGCAAAATTCCCAACTGCCTCCTGGCAGAGGCCCAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR-3UTR GCA 90 bp | AGCAGCAGAGAAGTCCTCCCCCGCTGGGAGGACTGCGGGGGATGTAGAGGTCATCCGCCCGAGTGCTCTTaGAGGTTGAGACAGATTCAG | + |
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Preference number: 2 (lower is better) Translates to: SSREVLPRWEDCGGCRGHPPECS*RLRQIQ Trigger: CTGAATCTGTCTCAACCTGCAAGAGCACTCGGGCGG...ATGACCTCTACATCCCCCGCAGTCCTCCCAGCGGGGGAGGACTTCTCTGCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCAGAGAAGTCCTCCCCCGCTGGGAGGACTGCGGGGGATGTAGAGGTCATCTGCCAGGAGGCAGTTaGGAATTTTGCAACAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: SSREVLPRWEDCGGCRGHLPGGS*EFCNSL Trigger: GAGGCTGTTGCAAAATTCCCAACTGCCTCCTGGCAG...ATGACCTCTACATCCCCCGCAGTCCTCCCAGCGGGGGAGGACTTCTCTGCTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR-3UTR CCA 90 bp | TCATGGAGTTTCCTCCTCTTTCATGTCACCTCCTGGCAACCTGTGCCCGGCTTCGGACCACATTCCACCTaGACCCCTGGGCACTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: SWSFLLFHVTSWQPVPGFGPHST*TPGHWA Trigger: TGCCCAGTGCCCAGGGGTCCAGGTGGAATGTGGTCC...GAAGCCGGGCACAGGTTGCCAGGAGGTGACATGAAAGAGGAGGAAACTCCATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR-3UTR TCA 90 bp | TGGGAGGACTGCGGGGGATGTAGAGGTCATGGAGTTTCCTCCTCTTTCATGTCAGAGGTGTCCTGCAGCTaGAGTCCCCGGCATGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: WEDCGGCRGHGVSSSFMSEVSCS*SPRHGG Trigger: TCCTCCATGCCGGGGACTTCAGCTGCAGGACACCTC...TGACATGAAAGAGGAGGAAACTCCATGACCTCTACATCCCCCGCAGTCCTCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR-3UTR TCA 90 bp | ACTGCGGGGGATGTAGAGGTCATGGAGTTTCCTCCTCTTTCATGTCACCTCCTGACTGCAGGCCTGTTGTaGGGTAATGCCTGGCGCCGC | + |
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Preference number: 2 (lower is better) Translates to: TAGDVEVMEFPPLSCHLLTAGLL*GNAWRR Trigger: GCGGCGCCAGGCATTACCTCACAACAGGCCTGCAGT...CAGGAGGTGACATGAAAGAGGAGGAAACTCCATGACCTCTACATCCCCCGCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCTATCTGCTTGTGTCTCGGCCTAGCCTCACTAGGCTTCTGGGGTTTGGATGGACCCCTGGGCACTaGGCAGGATTCAGAGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: QSYLLVSRPSLTRLLGFGWTPGH*AGFRGQ Trigger: TTGCCCTCTGAATCCTGCCCAGTGCCCAGGGGTCCA...TCCAAACCCCAGAAGCCTAGTGAGGCTAGGCCGAGACACAAGCAGATAGCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR-3UTR GCA 90 bp | CTTTGGGCCTCTGCCAGGAGGCAGTTGGGAATTTTGCAACAGCCTCCAGGAGGGCTCCAAGAATACCACTaGCTTAGGAGCCAGCACCTC | + |
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Preference number: 2 (lower is better) Translates to: LWASARRQLGILQQPPGGLQEYH*LRSQHL Trigger: GAGGTGCTGGCTCCTAAGGCAGTGGTATTCTTGGAG...CCCTCCTGGAGGCTGTTGCAAAATTCCCAACTGCCTCCTGGCAGAGGCCCAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR-3UTR GCA 90 bp | CACACACACACACACTCACATTCATTCATAGCTCGCTCTCTCTCTCTCTCTCTCTCCAAGGCTCTCGCCTaGCCTGGCTGCAGCTGCGCC | + |
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Preference number: 2 (lower is better) Translates to: HTHTHSHSFIARSLSLSLSKALA*PGCSCA Trigger: GGCGCAGCTGCAGCCAGGGCAGGCGAGAGCCTTGGA...GAGAGAGAGAGAGAGAGAGCGAGCTATGAATGAATGTGAGTGTGTGTGTGTGTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR-3UTR CCA 90 bp | ACTGCGGGGGATGTAGAGGTCATGGAGTTTCCTCCTCTTTCATGTCACCTCCTGGCATGGAGGACAGAGTaGCAGCATGGCCAGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: TAGDVEVMEFPPLSCHLLAWRTE*QHGQAG Trigger: TCCTGCCTGGCCATGCTGCCACTCTGTCCTCCATGC...CAGGAGGTGACATGAAAGAGGAGGAAACTCCATGACCTCTACATCCCCCGCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCTATCTGCTTGTGTCTCGGCCTAGCCTCACTAGGCTTCTGGGGTTTGGACATCTAGGCGCTCACTaGCCATCCTCTAGCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: QSYLLVSRPSLTRLLGFGHLGAH*PSSSSS Trigger: AGAGGAGCTAGAGGATGGCCAGTGAGCGCCTAGATG...TCCAAACCCCAGAAGCCTAGTGAGGCTAGGCCGAGACACAAGCAGATAGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCAGAGAAGTCCTCCCCCGCTGGGAGGACTGCGGGGGATGTAGAGGTCATCTCATGTTGTGGCCCTaGTCACAATATAGCAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: SSREVLPRWEDCGGCRGHLMLWP*SQYSRD Trigger: ATCTCTGCTATATTGTGACCAGGGCCACAACATGAG...ATGACCTCTACATCCCCCGCAGTCCTCCCAGCGGGGGAGGACTTCTCTGCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR CAA 90 bp | CCCAGCCATGGAGGACATACGAAGAACAATGCCAGAGCTATCTGCTaGTGTCTCGGCCTAGCCTCACTAGGCTTCTGGGGTTTGGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: PSHGGHTKNNARAIC*CLGLASLGFWGLEL Trigger: CAACTCCAAACCCCAGAAGCCTAGTGAGGCTAGGCCGAGACACAAGCAGATAGCTCTGGCATTGTTCTTCGTATGTCCTCCATGGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR-3UTR GCA 90 bp | GGTAGCAGCCCCAGCCATGGAGGACATACGAAGAACAATGCCAGAGCTATCTGCGGCAGTTGGGAATTTTaGAACAGCCTCCAGGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: GSSPSHGGHTKNNARAICGSWEF*NSLQEG Trigger: ACCCTCCTGGAGGCTGTTGCAAAATTCCCAACTGCC...GCAGATAGCTCTGGCATTGTTCTTCGTATGTCCTCCATGGCTGGGGCTGCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR-3UTR CCA 90 bp | CACACACACACACACTCACATTCATTCATAGCTCGCTCTCTCTCTCTCTCTCTCGACAGAGTGGCAGCATaGCCAGGCAGGAGACTGCCC | + |
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Preference number: 2 (lower is better) Translates to: HTHTHSHSFIARSLSLSLDRVAA*PGRRLP Trigger: GGGCAGTCTCCTGCCTGGCCATGCTGCCACTCTGTC...GAGAGAGAGAGAGAGAGAGCGAGCTATGAATGAATGTGAGTGTGTGTGTGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR-3UTR CCA 90 bp | AGGACTGCGGGGGATGTAGAGGTCATGGAGTTTCCTCCTCTTTCATGTCACCTCAGCAGTTCATCTCCCTaGCCCCTGGAGTTGTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: RTAGDVEVMEFPPLSCHLSSSSP*PLELSH Trigger: ATGAGACAACTCCAGGGGCCAGGGAGATGAACTGCT...GAGGTGACATGAAAGAGGAGGAAACTCCATGACCTCTACATCCCCCGCAGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR-3UTR CCA 90 bp | TCACAATGTTTATTGCTGTGCTGTTGTGAAGACACCATGCAAATGCCAAAGTGCTTCCACCTGGACCCCTaGGCACTGGGCAGGATTCAG | + |
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Preference number: 2 (lower is better) Translates to: SQCLLLCCCEDTMQMPKCFHLDP*ALGRIQ Trigger: CTGAATCCTGCCCAGTGCCCAGGGGTCCAGGTGGAA...GCACTTTGGCATTTGCATGGTGTCTTCACAACAGCACAGCAATAAACATTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR-3UTR CCA 90 bp | TCACAATGTTTATTGCTGTGCTGTTGTGAAGACACCATGCAAATGCCAAAGTGCTTTCATGTCACCTCCTaGCAACCTGTGCCCGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: SQCLLLCCCEDTMQMPKCFHVTS*QPVPGF Trigger: GAAGCCGGGCACAGGTTGCCAGGAGGTGACATGAAA...GCACTTTGGCATTTGCATGGTGTCTTCACAACAGCACAGCAATAAACATTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR CAA 90 bp | TATTGCTGTGCTGTTGTGAAGACACCATGCAAATGCCAAAGTGCATaGAGTATTGCCCAGCCTCTCAAACGAGTACAAATCTCAAGTGTA | + |
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Preference number: 2 (lower is better) Translates to: YCCAVVKTPCKCQSA*SIAQPLKRVQISSV Trigger: TACACTTGAGATTTGTACTCGTTTGAGAGGCTGGGCAATACTCAATGCACTTTGGCATTTGCATGGTGTCTTCACAACAGCACAGCAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR GCA 72 bp | CTGGCACCCAGCTCCAAGGCTCTCGCCTGCCCTGGCTaGAGCTGCGCCAGGGCTCTTGTTAGCAGCTGCCCC | + |
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Preference number: 3 (lower is better) Translates to: LAPSSKALACPG*SCARALVSSCP Trigger: GGGGCAGCTGCTAACAAGAGCCCTGGCGCAGCTGCAGCCAGGGCAGGCGAGAGCCTTGGAGCTGGGTGCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR GCA 72 bp | CCTGGCTGCAGCTGCGCCAGGGCTCTTGTTAGCAGCTaGCCCCGCCTGGGCGCAGAGCATACTTTGGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: PGCSCARALVSS*PRLGAEHTLGL Trigger: GAGGCCCAAAGTATGCTCTGCGCCCAGGCGGGGGCAGCTGCTAACAAGAGCCCTGGCGCAGCTGCAGCCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR CCA 72 bp | GCTGCGCCAGGGCTCTTGTTAGCAGCTGCCCCCGCCTaGGCGCAGAGCATACTTTGGGCCTCTGCCAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: AAPGLLLAAAPA*AQSILWASARR Trigger: CCTCCTGGCAGAGGCCCAAAGTATGCTCTGCGCCCAGGCGGGGGCAGCTGCTAACAAGAGCCCTGGCGCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR TCA 72 bp | GGTAATGCCTGGCGCCGCCCGAGTGCTCTTGCAGGTTaGGACAGATTCAGGCCGGGTGAGGTAGCAGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: GNAWRRPSALAG*DRFRPGEVAAP Trigger: TGGGGCTGCTACCTCACCCGGCCTGAATCTGTCTCAACCTGCAAGAGCACTCGGGCGGCGCCAGGCATTACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR CCA 72 bp | GCTGAAGTCCCCGGCATGGAGGACAGAGTGGCAGCATaGCCAGGCAGGAGACTGCCCGTGGGCAGAAGTACA | + |
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Preference number: 3 (lower is better) Translates to: AEVPGMEDRVAA*PGRRLPVGRST Trigger: TGTACTTCTGCCCACGGGCAGTCTCCTGCCTGGCCATGCTGCCACTCTGTCCTCCATGCCGGGGACTTCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR TCA 72 bp | CAGCTCGTGGGGTCAACAGGTGAGGTGTCCTGCAGCTaGAGTCCCCGGCATGGAGGACAGAGTGGCAGCATG | + |
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Preference number: 3 (lower is better) Translates to: QLVGSTGEVSCS*SPRHGGQSGSM Trigger: CATGCTGCCACTCTGTCCTCCATGCCGGGGACTTCAGCTGCAGGACACCTCACCTGTTGACCCCACGAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR TCA 72 bp | TGCCCAGGAGGGAAGCCAACAACTGCAGGCCTGTTGTaGGGTAATGCCTGGCGCCGCCCGAGTGCTCTTGCA | + |
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Preference number: 3 (lower is better) Translates to: CPGGKPTTAGLL*GNAWRRPSALA Trigger: TGCAAGAGCACTCGGGCGGCGCCAGGCATTACCTCACAACAGGCCTGCAGTTGTTGGCTTCCCTCCTGGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR GCA 72 bp | TGCCCCCGCCTGGGCGCAGAGCATACTTTGGGCCTCTaGCAGGAGGCAGTTGGGAATTTTGCAACAGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: CPRLGAEHTLGL*QEAVGNFATAS Trigger: GGAGGCTGTTGCAAAATTCCCAACTGCCTCCTGGCAGAGGCCCAAAGTATGCTCTGCGCCCAGGCGGGGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTCCTCTTTCATGTCACCTCCTGGCAACCTGTGCCCGGCTTCGAGAGGTGGCCCTGGCCCCTGGAGTaGTCTCATGTTGTGGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: FLLFHVTSWQPVPGFERWPWPLE*SHVVAL Trigger: CAGGGCCACAACATGAGACAACTCCAGGGGCCAGGG...CCACCTCTCGAAGCCGGGCACAGGTTGCCAGGAGGTGACATGAAAGAGGAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| 3UTR CCA 72 bp | TTAGCAGCTGCCCCCGCCTGGGCGCAGAGCATACTTTaGGCCTCTGCCAGGAGGCAGTTGGGAATTTTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LAAAPAWAQSIL*ASARRQLGILQ Trigger: TTGCAAAATTCCCAACTGCCTCCTGGCAGAGGCCCAAAGTATGCTCTGCGCCCAGGCGGGGGCAGCTGCTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| 3UTR CCA 72 bp | ACTGGGCAGGATTCAGAGGGCAAGGGCCCCCATCCCTaGTCAATGACCTCTCTGCCCAGGTGTTTCGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: TGQDSEGKGPHP*SMTSLPRCFGL Trigger: AAGTCCGAAACACCTGGGCAGAGAGGTCATTGACCAGGGATGGGGGCCCTTGCCCTCTGAATCCTGCCCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTCCTCTTTCATGTCACCTCCTGGCAACCTGTGCCCGGCTTCGAGAGGTGGGCCGCCCGAGTGCTCTaGCAGGTTGAGACAGATTCA | + |
|
Preference number: 3 (lower is better) Translates to: FLLFHVTSWQPVPGFERWAARVL*QVETDS Trigger: TGAATCTGTCTCAACCTGCAAGAGCACTCGGGCGGC...CCACCTCTCGAAGCCGGGCACAGGTTGCCAGGAGGTGACATGAAAGAGGAGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGTTCCTATAGTCCCCAGGACCACATTCCACCTGGACCCCTGGGCACTGGGAGGCAGTTGGGAATTTaGCAACAGCCTCCAGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LSSYSPQDHIPPGPLGTGRQLGI*QQPPGG Trigger: CCCTCCTGGAGGCTGTTGCAAAATTCCCAACTGCCT...CCCAGTGCCCAGGGGTCCAGGTGGAATGTGGTCCTGGGGACTATAGGAACTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| 3UTR-3UTR CAA 90 bp | GGTAGCAGCCCCAGCCATGGAGGACATACGAAGAACAATGCCAGAGCTATCTGCCTAGGCTTCTGGGGTTaGGAGTTGGGGTGCCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: GSSPSHGGHTKNNARAICLGFWG*ELGCPV Trigger: GACAGGGCACCCCAACTCCAAACCCCAGAAGCCTAG...GCAGATAGCTCTGGCATTGTTCTTCGTATGTCCTCCATGGCTGGGGCTGCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| 3UTR GCA 72 bp | GTTTCCTCCTCTTTCATGTCACCTCCTGGCAACCTGTaGCCGGCTTCGAGAGGTGGCATGGGCAGGAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VSSSFMSPPGNL*PASRGGMGRKR Trigger: CCTTTTCCTGCCCATGCCACCTCTCGAAGCCGGGCACAGGTTGCCAGGAGGTGACATGAAAGAGGAGGAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| 3UTR CCA 72 bp | AGGTCATGGAGTTTCCTCCTCTTTCATGTCACCTCCTaGCAACCTGTGCCCGGCTTCGAGAGGTGGCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: RSWSFLLFHVTS*QPVPGFERWHG Trigger: CCCATGCCACCTCTCGAAGCCGGGCACAGGTTGCCAGGAGGTGACATGAAAGAGGAGGAAACTCCATGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| 3UTR CCA 72 bp | ATCTGCTTGTGTCTCGGCCTAGCCTCACTAGGCTTCTaGGGTTTGGAGTTGGGGTGCCCTGTCCCATCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ICLCLGLASLGF*GLELGCPVPSV Trigger: TACAGATGGGACAGGGCACCCCAACTCCAAACCCCAGAAGCCTAGTGAGGCTAGGCCGAGACACAAGCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| 3UTR TCA 72 bp | GGTTTGGAGTTGGGGTGCCCTGTCCCATCTGTACCTTaGGTTCCTATAGTCCCCAGGACCACATTCCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: GLELGCPVPSVP*VPIVPRTTFHL Trigger: CAGGTGGAATGTGGTCCTGGGGACTATAGGAACTCAAGGTACAGATGGGACAGGGCACCCCAACTCCAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| 3UTR TCA 72 bp | CACACACACACACTCACACACACACACAGGAGTGCATaGTGTTCTTCGGAGCAGCAGAGAAGTCCTCCCCCG | + |
|
Preference number: 3 (lower is better) Translates to: HTHTLTHTHRSA*CSSEQQRSPPP Trigger: CGGGGGAGGACTTCTCTGCTGCTCCGAAGAACATCATGCACTCCTGTGTGTGTGTGTGAGTGTGTGTGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| 3UTR CCA 72 bp | CACGCAACACATGCAGGGCAGCATCTAGGCGCTCACTaGCCATCCTCTAGCTCCTCTAAAAGGCTCCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HATHAGQHLGAH*PSSSSSKRLQE Trigger: TTCTTGGAGCCTTTTAGAGGAGCTAGAGGATGGCCAGTGAGCGCCTAGATGCTGCCCTGCATGTGTTGCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| 3UTR CCA 72 bp | CCAGCCTCAAAGACAGCAGTTCATCTCCCTGGCCCCTaGAGTTGTCTCATGTTGTGGCCCTGGTCACAATAT | + |
|
Preference number: 3 (lower is better) Translates to: PASKTAVHLPGP*SCLMLWPWSQY Trigger: ATATTGTGACCAGGGCCACAACATGAGACAACTCCAGGGGCCAGGGAGATGAACTGCTGTCTTTGAGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| 3UTR GCA 72 bp | CACACACACACACACACTCACACACACACACAGGAGTaGATGATGTTCTTCGGAGCAGCAGAGAAGTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHTHTHTQE*MMFFGAAEKSS Trigger: GGAGGACTTCTCTGCTGCTCCGAAGAACATCATGCACTCCTGTGTGTGTGTGTGAGTGTGTGTGTGTGTGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| 3UTR CCA 72 bp | CTCCCTGGCCCCTGGAGTTGTCTCATGTTGTGGCCCTaGTCACAATATAGCAGAGATAGTCACGCAACACAT | + |
|
Preference number: 3 (lower is better) Translates to: LPGPWSCLMLWP*SQYSRDSHATH Trigger: ATGTGTTGCGTGACTATCTCTGCTATATTGTGACCAGGGCCACAACATGAGACAACTCCAGGGGCCAGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| 3UTR GCA 72 bp | GAAGACACCATGCAAATGCCAAAGTGCATTGAGTATTaGCCAGCCTCTCAAACGAGTACAAATCTCAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: EDTMQMPKCIEY*PASQTSTNLKC Trigger: ACACTTGAGATTTGTACTCGTTTGAGAGGCTGGGCAATACTCAATGCACTTTGGCATTTGCATGGTGTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| 3UTR GCA 72 bp | GTTTATTGCTGTGCTGTTGTGAAGACACCATGCAAATaGCAAAGTGCATTGAGTATTGCCCAGCCTCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: VYCCAVVKTPCK*QSALSIAQPLK Trigger: TTTGAGAGGCTGGGCAATACTCAATGCACTTTGGCATTTGCATGGTGTCTTCACAACAGCACAGCAATAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| 3UTR GCA 72 bp | CACAATGTTTATTGCTGTGCTGTTGTGAAGACACCATaGAAATGCCAAAGTGCATTGAGTATTGCCCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: HNVYCCAVVKTP*KCQSALSIAQP Trigger: AGGCTGGGCAATACTCAATGCACTTTGGCATTTGCATGGTGTCTTCACAACAGCACAGCAATAAACATTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGCTGCGCCAGGGCTCTTGTTAGCAGCTGCCCCCGCCTGGGCGCAGAGCCAGGTAGTGCAGCAGTaGGTGCTGCACCTGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AAAAPGLLLAAAPAWAQSQVVQQ*VLHLAQ Trigger: CTGAGCCAGGTGCAGCACCCACTGCTGCACTACCTG...GCTCTGCGCCCAGGCGGGGGCAGCTGCTAACAAGAGCCCTGGCGCAGCTGCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR TCA 90 bp | GCTGCAGCTGCGCCAGGGCTCTTGTTAGCAGCTGCCCCCGCCTGGGCGCAGAGCGGCTTTGTGGAGGGCTaGAGGCCAGAATCGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AAAAPGLLLAAAPAWAQSGFVEG*RPESRK Trigger: CTTCCTCGATTCTGGCCTTCAGCCCTCCACAAAGCC...GCTCTGCGCCCAGGCGGGGGCAGCTGCTAACAAGAGCCCTGGCGCAGCTGCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR GCA 90 bp | GCAGCTGCGCCAGGGCTCTTGTTAGCAGCTGCCCCCGCCTGGGCGCAGAGCATACCGCTTTGCCCAGAGTaGACAGGGTCTCCAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: AAAPGLLLAAAPAWAQSIPLCPE*TGSPGS Trigger: AGATCCTGGAGACCCTGTGCACTCTGGGCAAAGCGG...TATGCTCTGCGCCCAGGCGGGGGCAGCTGCTAACAAGAGCCCTGGCGCAGCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR CCA 90 bp | TTCCTCCTCTTTCATGTCACCTCCTGGCAACCTGTGCCCGGCTTCGAGAGGTGGGCAGCAGGTCAATGCTaGGCTCCCGCGCCCCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: FLLFHVTSWQPVPGFERWAAGQC*APAPPR Trigger: CCGTGGGGGCGCGGGAGCCCAGCATTGACCTGCTGC...CCACCTCTCGAAGCCGGGCACAGGTTGCCAGGAGGTGACATGAAAGAGGAGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR CCA 90 bp | CTTTGGGCCTCTGCCAGGAGGCAGTTGGGAATTTTGCAACAGCCTCCAGGAGGGAGGGGCCAACCCCAGTaGGCCACACGGGAGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LWASARRQLGILQQPPGGRGQPQ*ATRELH Trigger: GTGCAGCTCCCGTGTGGCCCACTGGGGTTGGCCCCT...CCCTCCTGGAGGCTGTTGCAAAATTCCCAACTGCCTCCTGGCAGAGGCCCAAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGCTGCGCCAGGGCTCTTGTTAGCAGCTGCCCCCGCCTGGGCGCAGAGCACCTTGCTGAAGAACTaGAACACCTGTTGTCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: AAAAPGLLLAAAPAWAQSTLLKN*NTCCRM Trigger: CATGCGACAACAGGTGTTCCAGTTCTTCAGCAAGGT...GCTCTGCGCCCAGGCGGGGGCAGCTGCTAACAAGAGCCCTGGCGCAGCTGCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR CCA 90 bp | GTAATGCCTGGCGCCGCCCGAGTGCTCTTGCAGGTTGAGACAGATTCAGGCCGGCTGGGGGAGGCTTTGTaGAGGGCTGAAGGCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VMPGAARVLLQVETDSGRLGEAL*RAEGQN Trigger: ATTCTGGCCTTCAGCCCTCCACAAAGCCTCCCCCAG...CCGGCCTGAATCTGTCTCAACCTGCAAGAGCACTCGGGCGGCGCCAGGCATTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR CCA 90 bp | GTAATGCCTGGCGCCGCCCGAGTGCTCTTGCAGGTTGAGACAGATTCAGGCCGGTGCTCTCCGGGAACCTaGCCCATCAGTTGCTTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VMPGAARVLLQVETDSGRCSPGT*PISCLR Trigger: ACGCAAGCAACTGATGGGCCAGGTTCCCGGAGAGCA...CCGGCCTGAATCTGTCTCAACCTGCAAGAGCACTCGGGCGGCGCCAGGCATTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| 3UTR CAA 72 bp | GTTAGCAGCTGCCCCCGCCTGGGCGCAGAGCATACTTaGGGCCTCTGCCAGGAGGCAGTTGGGAATTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSSCPRLGAEHT*GLCQEAVGNFA Trigger: TGCAAAATTCCCAACTGCCTCCTGGCAGAGGCCCAAAGTATGCTCTGCGCCCAGGCGGGGGCAGCTGCTAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR TCA 90 bp | CTGTTCGTGAAGCCTCGGAGAAACCTGCCGAGTCTTAGCAGCTTCCATGATACCGCAGGGGAGCGCAGCTaGCGCAGCAAGGCTGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFVKPRRNLPSLSSFHDTAGERS*RSKAVS Trigger: GCTGACAGCCTTGCTGCGTCAGCTGCGCTCCCCTGC...GGTATCATGGAAGCTGCTAAGACTCGGCAGGTTTCTCCGAGGCTTCACGAACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR GCA 90 bp | CATGGCCAGGCAGGAGACTGCCCGTGGGCAGAAGTACACAGGCAGGAATCTTCCCCGTCACTGCTGTTTTaGCATCCGAACTGGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HGQAGDCPWAEVHRQESSPSLLF*HPNWWR Trigger: CCGCCACCAGTTCGGATGGCAAAACAGCAGTGACGG...GGAAGATTCCTGCCTGTGTACTTCTGCCCACGGGCAGTCTCCTGCCTGGCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR CCA 90 bp | ATGGCCAGGCAGGAGACTGCCCGTGGGCAGAAGTACACAGGCAGGAATCTTCCCCTGTCAGCAGGGCAGTaGAGGTCAGGATGCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MARQETARGQKYTGRNLPLSAGQ*RSGCSA Trigger: AGCAGAGCATCCTGACCTCCACTGCCCTGCTGACAG...GGGAAGATTCCTGCCTGTGTACTTCTGCCCACGGGCAGTCTCCTGCCTGGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGCAGAGAAGTCCTCCCCCGCTGGGAGGACTGCGGGGGATGTAGAGGTCATCTAAGAGGAAGGTCATaGCCTCCTGCAGCAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSREVLPRWEDCGGCRGHLRGRS*PPAAVQ Trigger: CTGCACTGCTGCAGGAGGCCATGACCTTCCTCTTAG...ATGACCTCTACATCCCCCGCAGTCCTCCCAGCGGGGGAGGACTTCTCTGCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR CCA 90 bp | GGTAGCAGCCCCAGCCATGGAGGACATACGAAGAACAATGCCAGAGCTATCTGCTGCCATCCGAACTGGTaGCGGGAGCTGGGGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSSPSHGGHTKNNARAICCHPNW*RELGEA Trigger: AGCCTCCCCCAGCTCCCGCCACCAGTTCGGATGGCA...GCAGATAGCTCTGGCATTGTTCTTCGTATGTCCTCCATGGCTGGGGCTGCTACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR TCA 90 bp | AGTCACGCAACACATGCAGGGCAGCATCTAGGCGCTCACTGGCCATCCTCTAGCGTCCAGGATCCCTGTTaGGAGCATCACTGTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SHATHAGQHLGAHWPSSSVQDPC*EHHCGD Trigger: GTCCCCACAGTGATGCTCTCAACAGGGATCCTGGAC...GCTAGAGGATGGCCAGTGAGCGCCTAGATGCTGCCCTGCATGTGTTGCGTGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR TCA 90 bp | TCAAAGACAGCAGTTCATCTCCCTGGCCCCTGGAGTTGTCTCATGTTGTGGCCCGGCCTTTCAGGCTCATaGGAGTCCAAGGGCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SKTAVHLPGPWSCLMLWPGLSGS*ESKGAG Trigger: CCCAGCGCCCTTGGACTCTCATGAGCCTGAAAGGCC...GGGCCACAACATGAGACAACTCCAGGGGCCAGGGAGATGAACTGCTGTCTTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR CCA 90 bp | TTCCTCCTCTTTCATGTCACCTCCTGGCAACCTGTGCCCGGCTTCGAGAGGTGGTCTGTGTCAGGTAGGTaGCAGCTGCTGGTGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLLFHVTSWQPVPGFERWSVSGR*QLLVRP Trigger: TGGCCTCACCAGCAGCTGCCACCTACCTGACACAGA...CCACCTCTCGAAGCCGGGCACAGGTTGCCAGGAGGTGACATGAAAGAGGAGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR CCA 90 bp | CATGGCCAGGCAGGAGACTGCCCGTGGGCAGAAGTACACAGGCAGGAATCTTCCGATACATGCAGGAGCTaGGGCTGCAGGGTCTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: HGQAGDCPWAEVHRQESSDTCRS*GCRVST Trigger: TGTAGAGACCCTGCAGCCCCAGCTCCTGCATGTATC...GGAAGATTCCTGCCTGTGTACTTCTGCCCACGGGCAGTCTCCTGCCTGGCCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR TCA 90 bp | ATGGCCAGGCAGGAGACTGCCCGTGGGCAGAAGTACACAGGCAGGAATCTTCCCTCAGCGTGGCAATGCTaGTCTCGTCTGAGAGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: MARQETARGQKYTGRNLPSAWQC*SRLRDG Trigger: ACCATCTCTCAGACGAGATCAGCATTGCCACGCTGA...GGGAAGATTCCTGCCTGTGTACTTCTGCCCACGGGCAGTCTCCTGCCTGGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR TCA 90 bp | CATGCAGGGCAGCATCTAGGCGCTCACTGGCCATCCTCTAGCTCCTCTAAAAGGCGAGGAAGCCATCGGTaGAGTAGGGGTCTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HAGQHLGAHWPSSSSSKRRGSHR*SRGLPP Trigger: TGGAGGAAGACCCCTACTTCACCGATGGCTTCCTCG...CCTTTTAGAGGAGCTAGAGGATGGCCAGTGAGCGCCTAGATGCTGCCCTGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR GCA 90 bp | CTTTGGGCCTCTGCCAGGAGGCAGTTGGGAATTTTGCAACAGCCTCCAGGAGGGTGCAACCACCGTGTGTaGCTCTGTGATGAGGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LWASARRQLGILQQPPGGCNHRV*LCDEVV Trigger: GACCACCTCATCACAGAGGCACACACGGTGGTTGCA...CCCTCCTGGAGGCTGTTGCAAAATTCCCAACTGCCTCCTGGCAGAGGCCCAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR GCA 90 bp | GGGAGGACTGCGGGGGATGTAGAGGTCATGGAGTTTCCTCCTCTTTCATGTCACAGACTGCGGATGGCCTaGTCATGGGGCTTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRTAGDVEVMEFPPLSCHRLRMA*SWGFCS Trigger: GCTGCAGAAGCCCCATGAGCAGGCCATCCGCAGTCT...GTGACATGAAAGAGGAGGAAACTCCATGACCTCTACATCCCCCGCAGTCCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR GCA 90 bp | TTCCTCCTCTTTCATGTCACCTCCTGGCAACCTGTGCCCGGCTTCGAGAGGTGGGTACCAGGAGCAGTTTaGCCGAAAACTGGGGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: FLLFHVTSWQPVPGFERWVPGAV*PKTGVP Trigger: GGGTACCCCAGTTTTCGGGCAAACTGCTCCTGGTAC...CCACCTCTCGAAGCCGGGCACAGGTTGCCAGGAGGTGACATGAAAGAGGAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR CCA 90 bp | CATGCAGGGCAGCATCTAGGCGCTCACTGGCCATCCTCTAGCTCCTCTAAAAGGAGTGGGTGCTGCACCTaGCTCAGGACCTTGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HAGQHLGAHWPSSSSSKRSGCCT*LRTLLK Trigger: CTTCAGCAAGGTCCTGAGCCAGGTGCAGCACCCACT...CCTTTTAGAGGAGCTAGAGGATGGCCAGTGAGCGCCTAGATGCTGCCCTGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR CCA 90 bp | CTTTGGGCCTCTGCCAGGAGGCAGTTGGGAATTTTGCAACAGCCTCCAGGAGGGAGTGGCAATGTCTGCTaGGTCAAGGCAGGCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LWASARRQLGILQQPPGGSGNVC*VKAGWH Trigger: ATGCCAGCCTGCCTTGACCCAGCAGACATTGCCACT...CCCTCCTGGAGGCTGTTGCAAAATTCCCAACTGCCTCCTGGCAGAGGCCCAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR TCA 90 bp | AGTCACGCAACACATGCAGGGCAGCATCTAGGCGCTCACTGGCCATCCTCTAGCGGCTCAGGACCTTGCTaGAGAACTGGAACACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SHATHAGQHLGAHWPSSSGSGPC*RTGTPV Trigger: AACAGGTGTTCCAGTTCTTCAGCAAGGTCCTGAGCC...GCTAGAGGATGGCCAGTGAGCGCCTAGATGCTGCCCTGCATGTGTTGCGTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR GCA 90 bp | ATGTCACCTCCTGGCAACCTGTGCCCGGCTTCGAGAGGTGGCATGGGCAGGAAAAGCAGCTCTGGATCCTaGTGTATCTTAGAGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MSPPGNLCPASRGGMGRKSSSGS*CILEQR Trigger: CCTCTGCTCTAAGATACAGCAGGATCCAGAGCTGCT...TTTCCTGCCCATGCCACCTCTCGAAGCCGGGCACAGGTTGCCAGGAGGTGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR GCA 90 bp | CATGCAGGGCAGCATCTAGGCGCTCACTGGCCATCCTCTAGCTCCTCTAAAAGGCCAGCCGACTCTTCTTaGTCTTGCACAGTCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HAGQHLGAHWPSSSSSKRPADSS*SCTVPA Trigger: TGCTGGGACTGTGCAAGAGCAAGAAGAGTCGGCTGG...CCTTTTAGAGGAGCTAGAGGATGGCCAGTGAGCGCCTAGATGCTGCCCTGCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR GCA 90 bp | AGTCACGCAACACATGCAGGGCAGCATCTAGGCGCTCACTGGCCATCCTCTAGCGAGGTCAGGATGCTCTaGTCAGATACATGCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHATHAGQHLGAHWPSSSEVRML*SDTCRS Trigger: GCTCCTGCATGTATCTGAGCAGAGCATCCTGACCTC...GCTAGAGGATGGCCAGTGAGCGCCTAGATGCTGCCCTGCATGTGTTGCGTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR TCA 90 bp | CACACACACACACACTCACATTCATTCATAGCTCGCTCTCTCTCTCTCTCTCTCGGTGGCAGCTGCTGGTaGGGCCACGCTTACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHSHSFIARSLSLSLGGSCW*GHAYQQ Trigger: CTGCTGGTAAGCGTGGCCTCACCAGCAGCTGCCACC...GAGAGAGAGAGAGAGAGAGCGAGCTATGAATGAATGTGAGTGTGTGTGTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR TCA 90 bp | TCATGGAGTTTCCTCCTCTTTCATGTCACCTCCTGGCAACCTGTGCCCGGCTTCCGTGTGGGGGAAACTTaGCAAACGCAATGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SWSFLLFHVTSWQPVPGFRVGET*QTQWQP Trigger: TGGCTGCCATTGCGTTTGTCAAGTTTCCCCCACACG...GAAGCCGGGCACAGGTTGCCAGGAGGTGACATGAAAGAGGAGGAAACTCCATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR GCA 90 bp | AGGACTGCGGGGGATGTAGAGGTCATGGAGTTTCCTCCTCTTTCATGTCACCTCTGTTCCACGAAGGCCTaGAGCAGGTCAATGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RTAGDVEVMEFPPLSCHLCSTKA*SRSMLG Trigger: GCCCAGCATTGACCTGCTGCAGGCCTTCGTGGAACA...GAGGTGACATGAAAGAGGAGGAAACTCCATGACCTCTACATCCCCCGCAGTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR GCA 90 bp | CAGAGCTATCTGCTTGTGTCTCGGCCTAGCCTCACTAGGCTTCTGGGGTTTGGAACCTGGCCCATCAGTTaGTTGCGTACCAGGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QSYLLVSRPSLTRLLGFGTWPIS*LRTRSS Trigger: ACTGCTCCTGGTACGCAAGCAACTGATGGGCCAGGT...TCCAAACCCCAGAAGCCTAGTGAGGCTAGGCCGAGACACAAGCAGATAGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR CCA 90 bp | GGGAGGACTGCGGGGGATGTAGAGGTCATGGAGTTTCCTCCTCTTTCATGTCACGTGGATGCTCAGTGCTaGGACACCACAGTGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRTAGDVEVMEFPPLSCHVDAQC*DTTVLL Trigger: AAGGAGCACTGTGGTGTCCCAGCACTGAGCATCCAC...GTGACATGAAAGAGGAGGAAACTCCATGACCTCTACATCCCCCGCAGTCCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR CCA 90 bp | CAGAGCTATCTGCTTGTGTCTCGGCCTAGCCTCACTAGGCTTCTGGGGTTTGGAAGGTACTCATGGATATaGGGGTGGGGGAACAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QSYLLVSRPSLTRLLGFGRYSWI*GWGNKA Trigger: CGCCTTGTTCCCCCACCCCCATATCCATGAGTACCT...TCCAAACCCCAGAAGCCTAGTGAGGCTAGGCCGAGACACAAGCAGATAGCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR CCA 90 bp | TTCCTCCTCTTTCATGTCACCTCCTGGCAACCTGTGCCCGGCTTCGAGAGGTGGTCAGACTTGCCCTTCTaGAGGTGGAGAGAAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLLFHVTSWQPVPGFERWSDLPF*RWREVQ Trigger: CTGAACTTCTCTCCACCTCCAGAAGGGCAAGTCTGA...CCACCTCTCGAAGCCGGGCACAGGTTGCCAGGAGGTGACATGAAAGAGGAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR CAA 72 bp | GGGTTTGGAGTTGGGGTGCCCTGTCCCATCTGTACCTaGAGTTCCTATAGTCCCCAGGACCACATTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GFGVGVPCPICT*SSYSPQDHIPP Trigger: AGGTGGAATGTGGTCCTGGGGACTATAGGAACTCAAGGTACAGATGGGACAGGGCACCCCAACTCCAAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR TCA 90 bp | CACACACACACACACTCACATTCATTCATAGCTCGCTCTCTCTCTCTCTCTCTCAGCCAGGGGCCAGGCTaGTGTAGGGATCCAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHSHSFIARSLSLSLSQGPG*CRDPGG Trigger: ACCTCCTGGATCCCTACATCAGCCTGGCCCCTGGCT...GAGAGAGAGAGAGAGAGAGCGAGCTATGAATGAATGTGAGTGTGTGTGTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR GCA 90 bp | GGGAGGACTGCGGGGGATGTAGAGGTCATGGAGTTTCCTCCTCTTTCATGTCACAGTCGGAGAAGTTTCTaGACAGGCCTGTGCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: GRTAGDVEVMEFPPLSCHSRRSF*TGLCTL Trigger: GAGTGTGCACAGGCCTGTGCAGAAACTTCTCCGACT...GTGACATGAAAGAGGAGGAAACTCCATGACCTCTACATCCCCCGCAGTCCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR GCA 90 bp | TGGGAGGACTGCGGGGGATGTAGAGGTCATGGAGTTTCCTCCTCTTTCATGTCACTCAGCCACAGCCTTTaGCAAGGCATCTGCAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: WEDCGGCRGHGVSSSFMSLSHSL*QGICNH Trigger: GTGGTTGCAGATGCCTTGGCAAAGGCTGTGGCTGAG...TGACATGAAAGAGGAGGAAACTCCATGACCTCTACATCCCCCGCAGTCCTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR GCA 90 bp | TCATGGAGTTTCCTCCTCTTTCATGTCACCTCCTGGCAACCTGTGCCCGGCTTCCAGGATGCTGGTCAGTaGCTAAGAGGAAGGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SWSFLLFHVTSWQPVPGFQDAGQ*LRGRSW Trigger: CCATGACCTTCCTCTTAGGCACTGACCAGCATCCTG...GAAGCCGGGCACAGGTTGCCAGGAGGTGACATGAAAGAGGAGGAAACTCCATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR GCA 90 bp | GGTAGCAGCCCCAGCCATGGAGGACATACGAAGAACAATGCCAGAGCTATCTGCTCTATGGCTGCAGGATaGTGGTCAGTGCCTAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSSPSHGGHTKNNARAICSMAAG*WSVPKR Trigger: CCTCTTAGGCACTGACCAGCATCCTGCAGCCATAGA...GCAGATAGCTCTGGCATTGTTCTTCGTATGTCCTCCATGGCTGGGGCTGCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR GCA 90 bp | TACTTTGGGCCTCTGCCAGGAGGCAGTTGGGAATTTTGCAACAGCCTCCAGGAGTGCTCATGGGGCTTCTaGAGCAGCTCCTCAAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: YFGPLPGGSWEFCNSLQECSWGF*SSSSNS Trigger: GCTATTTGAGGAGCTGCTGCAGAAGCCCCATGAGCA...CTCCTGGAGGCTGTTGCAAAATTCCCAACTGCCTCCTGGCAGAGGCCCAAAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR GCA 90 bp | AGTCACGCAACACATGCAGGGCAGCATCTAGGCGCTCACTGGCCATCCTCTAGCTGGCAGCCAGCTCCTTaGAGAATTCCTCAAGTACTA | + |
|
Preference number: 4 (lower is better) Translates to: SHATHAGQHLGAHWPSSSWQPAP*RIPQVL Trigger: TAGTACTTGAGGAATTCTGCAAGGAGCTGGCTGCCA...GCTAGAGGATGGCCAGTGAGCGCCTAGATGCTGCCCTGCATGTGTTGCGTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR GCA 90 bp | TCACAATGTTTATTGCTGTGCTGTTGTGAAGACACCATGCAAATGCCAAAGTGCCCTGCAGCAGGTCAATaGTGGGCTCCCGCGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQCLLLCCCEDTMQMPKCPAAGQ*WAPAPP Trigger: TGGGGGCGCGGGAGCCCAGCATTGACCTGCTGCAGG...GCACTTTGGCATTTGCATGGTGTCTTCACAACAGCACAGCAATAAACATTGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR GCA 90 bp | GGCCATCCTCTAGCTCCTCTAAAAGGCTCCAAGAATACCACTGCCTTAGGAGCCAGCCTCACCAGAGGATaGCTGCTGCTTCTCCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: GHPLAPLKGSKNTTALGASLTRG*LLLLLI Trigger: TATGAGGAGAAGCAGCAGGCATCCTCTGGTGAGGCT...GGCTCCTAAGGCAGTGGTATTCTTGGAGCCTTTTAGAGGAGCTAGAGGATGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR CCA 90 bp | ACTGCGGGGGATGTAGAGGTCATGGAGTTTCCTCCTCTTTCATGTCACCTCCTGATGGCTGCAGGATGCTaGTCAGTGCCTAAGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TAGDVEVMEFPPLSCHLLMAAGC*SVPKRK Trigger: CTTCCTCTTAGGCACTGACCAGCATCCTGCAGCCAT...CAGGAGGTGACATGAAAGAGGAGGAAACTCCATGACCTCTACATCCCCCGCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR GCA 90 bp | CACACACACACACACTCACATTCATTCATAGCTCGCTCTCTCTCTCTCTCTCTCCTCTGCTCAGATACATaGAGGAGCTGGGGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHSHSFIARSLSLSLLCSDT*RSWGCR Trigger: CCTGCAGCCCCAGCTCCTGCATGTATCTGAGCAGAG...GAGAGAGAGAGAGAGAGAGCGAGCTATGAATGAATGTGAGTGTGTGTGTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR GCA 90 bp | GGGAGGACTGCGGGGGATGTAGAGGTCATGGAGTTTCCTCCTCTTTCATGTCACAACAATCTCCGTCACTaGTGTTTTGCCATCCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: GRTAGDVEVMEFPPLSCHNNLRH*CFAIRT Trigger: AGTTCGGATGGCAAAACAGCAGTGACGGAGATTGTT...GTGACATGAAAGAGGAGGAAACTCCATGACCTCTACATCCCCCGCAGTCCTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR CCA 90 bp | TGGGAGGACTGCGGGGGATGTAGAGGTCATGGAGTTTCCTCCTCTTTCATGTCAATAGGCCAGCAGCTCTaGATCCTGCTGTATCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: WEDCGGCRGHGVSSSFMSIGQQL*ILLYLR Trigger: TCTAAGATACAGCAGGATCCAGAGCTGCTGGCCTAT...TGACATGAAAGAGGAGGAAACTCCATGACCTCTACATCCCCCGCAGTCCTCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR GCA 90 bp | TCACAATGTTTATTGCTGTGCTGTTGTGAAGACACCATGCAAATGCCAAAGTGCGGGGGTACTCCGCTTTaGCCAGAGTGCACAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQCLLLCCCEDTMQMPKCGGTPL*PECTGS Trigger: AGACCCTGTGCACTCTGGGCAAAGCGGAGTACCCCC...GCACTTTGGCATTTGCATGGTGTCTTCACAACAGCACAGCAATAAACATTGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR TCA 90 bp | AGGACTGCGGGGGATGTAGAGGTCATGGAGTTTCCTCCTCTTTCATGTCACCTCAACTGGGGTACCCTCTaGATTCTTTGCATTAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RTAGDVEVMEFPPLSCHLNWGTL*ILCIKS Trigger: TGACTTAATGCAAAGAATTCAGAGGGTACCCCAGTT...GAGGTGACATGAAAGAGGAGGAAACTCCATGACCTCTACATCCCCCGCAGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR TCA 90 bp | TCACAATGTTTATTGCTGTGCTGTTGTGAAGACACCATGCAAATGCCAAAGTGCCTTCTTCCTTTTCTGTaGGGGATCCAGGGACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQCLLLCCCEDTMQMPKCLLPFL*GIQGLS Trigger: GGACAGTCCCTGGATCCCTCACAGAAAAGGAAGAAG...GCACTTTGGCATTTGCATGGTGTCTTCACAACAGCACAGCAATAAACATTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| 3UTR CAA 72 bp | GCTGTTGTGAAGACACCATGCAAATGCCAAAGTGCATaGAGTATTGCCCAGCCTCTCAAACGAGTACAAATC | + |
|
Preference number: 4 (lower is better) Translates to: AVVKTPCKCQSA*SIAQPLKRVQI Trigger: GATTTGTACTCGTTTGAGAGGCTGGGCAATACTCAATGCACTTTGGCATTTGCATGGTGTCTTCACAACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS GCA 90 bp | GGCTCCGGCGAGCCCCGGGCCACGTACAGGCGGCCCTCGAGGTTCTaGAGGACCAGACTGCGGATGGCCTGCTCATGGGGCTTCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSGEPRATYRRPSRF*RTRLRMACSWGFCS Trigger: GCTGCAGAAGCCCCATGAGCAGGCCATCCGCAGTCTGGTCCTGCAGAACCTCGAGGGCCGCCTGTACGTGGCCCGGGGCTCGCCGGAGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR CAA 90 bp | GCTGCAGCTGCGCCAGGGCTCTTGTTAGCAGCTGCCCCCGCCTGGGCGCAGAGCGCAGCCAGAGCCTCCTaGCCAGGGAAAGCGGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AAAAPGLLLAAAPAWAQSAARAS*PGKAVS Trigger: TGAGACCGCTTTCCCTGGCAAGGAGGCTCTGGCTGC...GCTCTGCGCCCAGGCGGGGGCAGCTGCTAACAAGAGCCCTGGCGCAGCTGCAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR CAA 90 bp | GCAGCTGCGCCAGGGCTCTTGTTAGCAGCTGCCCCCGCCTGGGCGCAGAGCATAGAGCTGGGGGAGGCTTaGTGGAGGGCTGAAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AAAPGLLLAAAPAWAQSIELGEA*WRAEGQ Trigger: CTGGCCTTCAGCCCTCCACAAAGCCTCCCCCAGCTC...TATGCTCTGCGCCCAGGCGGGGGCAGCTGCTAACAAGAGCCCTGGCGCAGCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS CCA 90 bp | GTGCAGGGGAGCGCAGCTGACGCAGCAAGGCTGTCAGCAGGGCAGTaGAGGTCAGGATGCTCTGCTCAGATACATGCAGGAGCTGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VQGSAADAARLSAGQ*RSGCSAQIHAGAGA Trigger: AGCCCCAGCTCCTGCATGTATCTGAGCAGAGCATCCTGACCTCCACTGCCCTGCTGACAGCCTTGCTGCGTCAGCTGCGCTCCCCTGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR CAA 90 bp | GCAGCTGCGCCAGGGCTCTTGTTAGCAGCTGCCCCCGCCTGGGCGCAGAGCATATCTCAGCCACAGCCTTaGCCAAGGCATCTGCAACCA | + |
|
Preference number: 5 (lower is better) Translates to: AAAPGLLLAAAPAWAQSISQPQP*PRHLQP Trigger: TGGTTGCAGATGCCTTGGCAAAGGCTGTGGCTGAGA...TATGCTCTGCGCCCAGGCGGGGGCAGCTGCTAACAAGAGCCCTGGCGCAGCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR CAA 90 bp | GCTGCAGCTGCGCCAGGGCTCTTGTTAGCAGCTGCCCCCGCCTGGGCGCAGAGCATGGCAGCCAGCTCCTaGCAGAATTCCTCAAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: AAAAPGLLLAAAPAWAQSMAASS*QNSSST Trigger: AGTACTTGAGGAATTCTGCAAGGAGCTGGCTGCCAT...GCTCTGCGCCCAGGCGGGGGCAGCTGCTAACAAGAGCCCTGGCGCAGCTGCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS GCA 90 bp | CCCGTTTTCTGGCCCCTCAGTCTCAGCGGGCAGGTGGATGCTCAGTaGTGGGACACCACAGTGCTCCTTATCCAGTCCAGGATCCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PVFWPLSLSGQVDAQ*WDTTVLLIQSRIPV Trigger: AACAGGGATCCTGGACTGGATAAGGAGCACTGTGGTGTCCCAGCACTGAGCATCCACCTGCCCGCTGAGACTGAGGGGCCAGAAAACGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS GCA 90 bp | AGGTTCTGCAGGACCAGACTGCGGATGGCCTGCTCATGGGGCTTCTaGAGCAGCTCCTCAAATAGCCTCAGCGTGGCAATGCTGATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RFCRTRLRMACSWGF*SSSSNSLSVAMLIS Trigger: CGAGATCAGCATTGCCACGCTGAGGCTATTTGAGGAGCTGCTGCAGAAGCCCCATGAGCAGGCCATCCGCAGTCTGGTCCTGCAGAACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS CCA 90 bp | GTTTTCTGGCCCCTCAGTCTCAGCGGGCAGGTGGATGCTCAGTGCTaGGACACCACAGTGCTCCTTATCCAGTCCAGGATCCCTGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VFWPLSLSGQVDAQC*DTTVLLIQSRIPVE Trigger: CTCAACAGGGATCCTGGACTGGATAAGGAGCACTGTGGTGTCCCAGCACTGAGCATCCACCTGCCCGCTGAGACTGAGGGGCCAGAAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR CAA 90 bp | TTGAGTTCCTATAGTCCCCAGGACCACATTCCACCTGGACCCCTGGGCACTGGGTCCGTCACTGCTGTTTaGCCATCCGAACTGGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSSYSPQDHIPPGPLGTGSVTAV*PSELVA Trigger: CGCCACCAGTTCGGATGGCAAAACAGCAGTGACGGA...CCCAGTGCCCAGGGGTCCAGGTGGAATGTGGTCCTGGGGACTATAGGAACTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS GCA 90 bp | TCAGTCTCAGCGGGCAGGTGGATGCTCAGTGCTGGGACACCACAGTaGTCCTTATCCAGTCCAGGATCCCTGTTGAGAGCATCACTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SVSAGRWMLSAGTPQ*SLSSPGSLLRASLW Trigger: CCACAGTGATGCTCTCAACAGGGATCCTGGACTGGATAAGGAGCACTGTGGTGTCCCAGCACTGAGCATCCACCTGCCCGCTGAGACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS CCA 90 bp | GCAATGTCTGCTGGGTCAAGGCAGGCTGGCATGGACCGGTACAGTTaGCAGAGGTGCTCAGCTATCGCCATACAGCAGGAGGTACTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AMSAGSRQAGMDRYS*QRCSAIAIQQEVLC Trigger: ACAGAGTACCTCCTGCTGTATGGCGATAGCTGAGCACCTCTGCCAACTGTACCGGTCCATGCCAGCCTGCCTTGACCCAGCAGACATTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS CCA 90 bp | TGCCCTCTAAAGTGGCAATGTCTGCTGGGTCAAGGCAGGCTGGCATaGACCGGTACAGTTGGCAGAGGTGCTCAGCTATCGCCATACAGC | + |
|
Preference number: 5 (lower is better) Translates to: CPLKWQCLLGQGRLA*TGTVGRGAQLSPYS Trigger: GCTGTATGGCGATAGCTGAGCACCTCTGCCAACTGTACCGGTCCATGCCAGCCTGCCTTGACCCAGCAGACATTGCCACTTTAGAGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR CAA 90 bp | TTCCTCCTCTTTCATGTCACCTCCTGGCAACCTGTGCCCGGCTTCGAGAGGTGGACCTGGCTCAGGACCTaGCTGAAGAACTGGAACACC | + |
|
Preference number: 5 (lower is better) Translates to: FLLFHVTSWQPVPGFERWTWLRT*LKNWNT Trigger: GGTGTTCCAGTTCTTCAGCAAGGTCCTGAGCCAGGT...CCACCTCTCGAAGCCGGGCACAGGTTGCCAGGAGGTGACATGAAAGAGGAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS TCA 90 bp | GTGCTGGGACACCACAGTGCTCCTTATCCAGTCCAGGATCCCTGTTaGGAGCATCACTGTGGGGACAGTCCTTGTCCCTGTAGCCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: VLGHHSAPYPVQDPC*EHHCGDSPCPCSQL Trigger: TAGCTGGCTACAGGGACAAGGACTGTCCCCACAGTGATGCTCTCAACAGGGATCCTGGACTGGATAAGGAGCACTGTGGTGTCCCAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS TCA 90 bp | CATACAGCAGGAGGTACTCTGTGTCAGGTAGGTGGCAGCTGCTGGTaGGGCCACGCTTACCAGCAGCAGTATGTTCTCCTGTGCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: HTAGGTLCQVGGSCW*GHAYQQQYVLLCLQ Trigger: CTGAAGGCACAGGAGAACATACTGCTGCTGGTAAGCGTGGCCTCACCAGCAGCTGCCACCTACCTGACACAGAGTACCTCCTGCTGTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS GCA 90 bp | TTCCTCAGGGACCAGGCAAAGGAAGCTGTTAACAATCTCCGTCACTaGTGTTTTGCCATCCGAACTGGTGGCGGGAGCTGGGGGAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FLRDQAKEAVNNLRH*CFAIRTGGGSWGRL Trigger: AAGCCTCCCCCAGCTCCCGCCACCAGTTCGGATGGCAAAACAGCAGTGACGGAGATTGTTAACAGCTTCCTTTGCCTGGTCCCTGAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS CCA 90 bp | GCTCAGCTATCGCCATACAGCAGGAGGTACTCTGTGTCAGGTAGGTaGCAGCTGCTGGTGAGGCCACGCTTACCAGCAGCAGTATGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AQLSPYSRRYSVSGR*QLLVRPRLPAAVCS Trigger: AGAACATACTGCTGCTGGTAAGCGTGGCCTCACCAGCAGCTGCCACCTACCTGACACAGAGTACCTCCTGCTGTATGGCGATAGCTGAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR CAA 90 bp | ATGTCACCTCCTGGCAACCTGTGCCCGGCTTCGAGAGGTGGCATGGGCAGGAAATCGATCAAAGAGCACTaGGAGGAAGCGACCCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: MSPPGNLCPASRGGMGRKSIKEH*EEATLK Trigger: TTTGAGGGTCGCTTCCTCCAAGTGCTCTTTGATCGA...TTTCCTGCCCATGCCACCTCTCGAAGCCGGGCACAGGTTGCCAGGAGGTGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR CAA 90 bp | GGGAGGACTGCGGGGGATGTAGAGGTCATGGAGTTTCCTCCTCTTTCATGTCACAACCTGGCCCATCAGTaGCTTGCGTACCAGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GRTAGDVEVMEFPPLSCHNLAHQ*LAYQEQ Trigger: CTGCTCCTGGTACGCAAGCAACTGATGGGCCAGGTT...GTGACATGAAAGAGGAGGAAACTCCATGACCTCTACATCCCCCGCAGTCCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
||
| CDS-3UTR CAA 90 bp | GGGAGGACTGCGGGGGATGTAGAGGTCATGGAGTTTCCTCCTCTTTCATGTCACCCGTGTGGGGGAAACTaGACAAACGCAATGGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: GRTAGDVEVMEFPPLSCHPCGGN*TNAMAA Trigger: GGCTGCCATTGCGTTTGTCAAGTTTCCCCCACACGG...GTGACATGAAAGAGGAGGAAACTCCATGACCTCTACATCCCCCGCAGTCCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR CAA 90 bp | AGGACTGCGGGGGATGTAGAGGTCATGGAGTTTCCTCCTCTTTCATGTCACCTCCGTACCAGGAGCAGTTaGCCCGAAAACTGGGGTACC | + |
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Preference number: 5 (lower is better) Translates to: RTAGDVEVMEFPPLSCHLRTRSS*PENWGT Trigger: GGTACCCCAGTTTTCGGGCAAACTGCTCCTGGTACG...GAGGTGACATGAAAGAGGAGGAAACTCCATGACCTCTACATCCCCCGCAGTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS TCA 90 bp | GAGGCTTTGTGGAGGGCTGAAGGCCAGAATCGAGGAAGCCATCGGTaGAGTAGGGGTCTTCCTCCAGATCTAGGGTATCCTCATAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: EALWRAEGQNRGSHR*SRGLPPDLGYPHSS Trigger: AGAGCTATGAGGATACCCTAGATCTGGAGGAAGACCCCTACTTCACCGATGGCTTCCTCGATTCTGGCCTTCAGCCCTCCACAAAGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR CAA 90 bp | GGCCATCCTCTAGCTCCTCTAAAAGGCTCCAAGAATACCACTGCCTTAGGAGCCTGGCCCATCAGTTGCTaGCGTACCAGGAGCAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: GHPLAPLKGSKNTTALGAWPISC*RTRSSL Trigger: CAAACTGCTCCTGGTACGCAAGCAACTGATGGGCCA...GGCTCCTAAGGCAGTGGTATTCTTGGAGCCTTTTAGAGGAGCTAGAGGATGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS TCA 90 bp | AGCCGGGACAAGACTGAGGTCACTTGTAGGTTCAGGCTGTACGGCTaGTCCAAAATCCGGGCGATTCGATCAAAGAGCACTTGGAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: SRDKTEVTCRFRLYG*SKIRAIRSKSTWRK Trigger: CTTCCTCCAAGTGCTCTTTGATCGAATCGCCCGGATTTTGGATCAGCCGTACAGCCTGAACCTACAAGTGACCTCAGTCTTGTCCCGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS GCA 90 bp | CTCCGGGAACCTGGCCCATCAGTTGCTTGCGTACCAGGAGCAGTTTaGCCGAAAACTGGGGTACCCTCTGAATTCTTTGCATTAAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: LREPGPSVACVPGAV*PKTGVPSEFFALSH Trigger: GTGACTTAATGCAAAGAATTCAGAGGGTACCCCAGTTTTCGGGCAAACTGCTCCTGGTACGCAAGCAACTGATGGGCCAGGTTCCCGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS-3UTR CAA 90 bp | CAGAGCTATCTGCTTGTGTCTCGGCCTAGCCTCACTAGGCTTCTGGGGTTTGGAAGGGTCTCCAGGATCTaGTGTTGTAGCAAGTATTCC | + |
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Preference number: 5 (lower is better) Translates to: QSYLLVSRPSLTRLLGFGRVSRI*CCSKYS Trigger: GGAATACTTGCTACAACACAAGATCCTGGAGACCCT...TCCAAACCCCAGAAGCCTAGTGAGGCTAGGCCGAGACACAAGCAGATAGCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS TCA 90 bp | AGCTCTGGATCCTGCTGTATCTTAGAGCAGAGGACACTGGTGAACTaGACTTCTTCCTTTTCTGTGAGGGATCCAGGGACTGTCCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: SSGSCCILEQRTLVN*TSSFSVRDPGTVPP Trigger: TGGAGGGACAGTCCCTGGATCCCTCACAGAAAAGGAAGAAGTTCAGTTCACCAGTGTCCTCTGCTCTAAGATACAGCAGGATCCAGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS TCA 90 bp | TGCTTGCGTACCAGGAGCAGTTTGCCCGAAAACTGGGGTACCCTCTaGATTCTTTGCATTAAGTCACCGATCACCCTGACAAGCACAGAG | + |
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Preference number: 5 (lower is better) Translates to: CLRTRSSLPENWGTL*ILCIKSPITLTSTE Trigger: CTCTGTGCTTGTCAGGGTGATCGGTGACTTAATGCAAAGAATTCAGAGGGTACCCCAGTTTTCGGGCAAACTGCTCCTGGTACGCAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS TCA 90 bp | TCTTGGCTGGGGTGTTTTCATCTGTGCTCTCGATATAGTAGTGTGTaGTGCCTTTCCAATGTTCCACGAAGGCCTGCAGCAGGTCAATGC | + |
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Preference number: 5 (lower is better) Translates to: SWLGCFHLCSRYSSV*CLSNVPRRPAAGQC Trigger: GCATTGACCTGCTGCAGGCCTTCGTGGAACATTGGAAAGGCATCACACACTACTATATCGAGAGCACAGATGAAAACACCCCAGCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS CCA 72 bp | GAGTCCAAGGGCGCTGGGCCTAGGGGCCAACCCCAGTaGGCCACACGGGAGCTGCACTCCTGGAACAAGCCG | + |
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Preference number: 6 (lower is better) Translates to: ESKGAGPRGQPQ*ATRELHSWNKP Trigger: CGGCTTGTTCCAGGAGTGCAGCTCCCGTGTGGCCCACTGGGGTTGGCCCCTAGGCCCAGCGCCCTTGGACTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS GCA 72 bp | GGCCTAGGGGCCAACCCCAGTGGGCCACACGGGAGCTaGACTCCTGGAACAAGCCGTAGGCATCGTGCACGT | + |
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Preference number: 6 (lower is better) Translates to: GLGANPSGPHGS*TPGTSRRHRAR Trigger: ACGTGCACGATGCCTACGGCTTGTTCCAGGAGTGCAGCTCCCGTGTGGCCCACTGGGGTTGGCCCCTAGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS GCA 72 bp | TGGCCCCTCAGTCTCAGCGGGCAGGTGGATGCTCAGTaGTGGGACACCACAGTGCTCCTTATCCAGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: WPLSLSGQVDAQ*WDTTVLLIQSR Trigger: CCTGGACTGGATAAGGAGCACTGTGGTGTCCCAGCACTGAGCATCCACCTGCCCGCTGAGACTGAGGGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS CCA 72 bp | GGCCCGTTTTCTGGCCCCTCAGTCTCAGCGGGCAGGTaGATGCTCAGTGCTGGGACACCACAGTGCTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: GPFSGPSVSAGR*MLSAGTPQCSL Trigger: TAAGGAGCACTGTGGTGTCCCAGCACTGAGCATCCACCTGCCCGCTGAGACTGAGGGGCCAGAAAACGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS CAA 72 bp | TGCCATCCGAACTGGTGGCGGGAGCTGGGGGAGGCTTaGTGGAGGGCTGAAGGCCAGAATCGAGGAAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: CHPNWWRELGEA*WRAEGQNRGSH Trigger: ATGGCTTCCTCGATTCTGGCCTTCAGCCCTCCACAAAGCCTCCCCCAGCTCCCGCCACCAGTTCGGATGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS GCA 72 bp | AAGGCTGTCAGCAGGGCAGTGGAGGTCAGGATGCTCTaGTCAGATACATGCAGGAGCTGGGGCTGCAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: KAVSRAVEVRML*SDTCRSWGCRV Trigger: GACCCTGCAGCCCCAGCTCCTGCATGTATCTGAGCAGAGCATCCTGACCTCCACTGCCCTGCTGACAGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS GCA 72 bp | GGGGGCTGTCCTCTATGGCTGCAGGATGCTGGTCAGTaGCTAAGAGGAAGGTCATGGCCTCCTGCAGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: GGCPLWLQDAGQ*LRGRSWPPAAV Trigger: CACTGCTGCAGGAGGCCATGACCTTCCTCTTAGGCACTGACCAGCATCCTGCAGCCATAGAGGACAGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS CCA 72 bp | CCCCTCAGTCTCAGCGGGCAGGTGGATGCTCAGTGCTaGGACACCACAGTGCTCCTTATCCAGTCCAGGATC | + |
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Preference number: 6 (lower is better) Translates to: PLSLSGQVDAQC*DTTVLLIQSRI Trigger: GATCCTGGACTGGATAAGGAGCACTGTGGTGTCCCAGCACTGAGCATCCACCTGCCCGCTGAGACTGAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS CCA 72 bp | GCTGGGTCAAGGCAGGCTGGCATGGACCGGTACAGTTaGCAGAGGTGCTCAGCTATCGCCATACAGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: AGSRQAGMDRYS*QRCSAIAIQQE Trigger: CTCCTGCTGTATGGCGATAGCTGAGCACCTCTGCCAACTGTACCGGTCCATGCCAGCCTGCCTTGACCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS GCA 72 bp | GCGGGCAGGTGGATGCTCAGTGCTGGGACACCACAGTaGTCCTTATCCAGTCCAGGATCCCTGTTGAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: AGRWMLSAGTPQ*SLSSPGSLLRA Trigger: TGCTCTCAACAGGGATCCTGGACTGGATAAGGAGCACTGTGGTGTCCCAGCACTGAGCATCCACCTGCCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS GCA 72 bp | CGTTTTCTGGCCCCTCAGTCTCAGCGGGCAGGTGGATaGTCAGTGCTGGGACACCACAGTGCTCCTTATCCA | + |
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Preference number: 6 (lower is better) Translates to: RFLAPQSQRAGG*SVLGHHSAPYP Trigger: TGGATAAGGAGCACTGTGGTGTCCCAGCACTGAGCATCCACCTGCCCGCTGAGACTGAGGGGCCAGAAAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS CCA 72 bp | TCGCCATACAGCAGGAGGTACTCTGTGTCAGGTAGGTaGCAGCTGCTGGTGAGGCCACGCTTACCAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SPYSRRYSVSGR*QLLVRPRLPAA Trigger: TGCTGCTGGTAAGCGTGGCCTCACCAGCAGCTGCCACCTACCTGACACAGAGTACCTCCTGCTGTATGGCGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS CAA 90 bp | GGCAATGTCTGCTGGGTCAAGGCAGGCTGGCATGGACCGGTACAGTaGGCAGAGGTGCTCAGCTATCGCCATACAGCAGGAGGTACTCTG | + |
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Preference number: 6 (lower is better) Translates to: GNVCWVKAGWHGPVQ*AEVLSYRHTAGGTL Trigger: CAGAGTACCTCCTGCTGTATGGCGATAGCTGAGCACCTCTGCCAACTGTACCGGTCCATGCCAGCCTGCCTTGACCCAGCAGACATTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS GCA 72 bp | AGGCAGGCTGGCATGGACCGGTACAGTTGGCAGAGGTaGTCAGCTATCGCCATACAGCAGGAGGTACTCTGT | + |
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Preference number: 6 (lower is better) Translates to: RQAGMDRYSWQR*SAIAIQQEVLC Trigger: ACAGAGTACCTCCTGCTGTATGGCGATAGCTGAGCACCTCTGCCAACTGTACCGGTCCATGCCAGCCTGCCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS CCA 72 bp | CTTGCTGAAGAACTGGAACACCTGTTGTCGCATGCCTaGGGGGTACTCCGCTTTGCCCAGAGTGCACAGGGT | + |
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Preference number: 6 (lower is better) Translates to: LAEELEHLLSHA*GVLRFAQSAQG Trigger: ACCCTGTGCACTCTGGGCAAAGCGGAGTACCCCCCAGGCATGCGACAACAGGTGTTCCAGTTCTTCAGCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS GCA 72 bp | TCCAGACAGGGTCCAGCCTCACCAGAGGATGCCTGCTaGTTCTCCTCATACACCAGGATGTCCAACATCTGC | + |
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Preference number: 6 (lower is better) Translates to: SRQGPASPEDAC*FSSYTRMSNIC Trigger: GCAGATGTTGGACATCCTGGTGTATGAGGAGAAGCAGCAGGCATCCTCTGGTGAGGCTGGACCCTGTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS CCA 72 bp | GAGGTCAGGATGCTCTGCTCAGATACATGCAGGAGCTaGGGCTGCAGGGTCTCTACAAACAGCTTCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: EVRMLCSDTCRS*GCRVSTNSFSA Trigger: GGCTGAGAAGCTGTTTGTAGAGACCCTGCAGCCCCAGCTCCTGCATGTATCTGAGCAGAGCATCCTGACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS CAA 72 bp | CAAAGGAAGCTGTTAACAATCTCCGTCACTGCTGTTTaGCCATCCGAACTGGTGGCGGGAGCTGGGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: QRKLLTISVTAV*PSELVAGAGGG Trigger: GCCTCCCCCAGCTCCCGCCACCAGTTCGGATGGCAAAACAGCAGTGACGGAGATTGTTAACAGCTTCCTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS TCA 72 bp | CACCACAGTGCTCCTTATCCAGTCCAGGATCCCTGTTaGGAGCATCACTGTGGGGACAGTCCTTGTCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: HHSAPYPVQDPC*EHHCGDSPCPC Trigger: ACAGGGACAAGGACTGTCCCCACAGTGATGCTCTCAACAGGGATCCTGGACTGGATAAGGAGCACTGTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS TCA 72 bp | TGGAGGGCTGAAGGCCAGAATCGAGGAAGCCATCGGTaGAGTAGGGGTCTTCCTCCAGATCTAGGGTATCCT | + |
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Preference number: 6 (lower is better) Translates to: WRAEGQNRGSHR*SRGLPPDLGYP Trigger: AGGATACCCTAGATCTGGAGGAAGACCCCTACTTCACCGATGGCTTCCTCGATTCTGGCCTTCAGCCCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS GCA 72 bp | GACCAGGCAAAGGAAGCTGTTAACAATCTCCGTCACTaGTGTTTTGCCATCCGAACTGGTGGCGGGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: DQAKEAVNNLRH*CFAIRTGGGSW Trigger: CCAGCTCCCGCCACCAGTTCGGATGGCAAAACAGCAGTGACGGAGATTGTTAACAGCTTCCTTTGCCTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS CCA 72 bp | TGGTCACAGTGCATGATGAGGTGTGTACCCAGAGTATaGGGGCTGTCCTCTATGGCTGCAGGATGCTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: WSQCMMRCVPRV*GLSSMAAGCWS Trigger: TGACCAGCATCCTGCAGCCATAGAGGACAGCCCCCATACTCTGGGTACACACCTCATCATGCACTGTGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS CAA 72 bp | ACACCACAGTGCTCCTTATCCAGTCCAGGATCCCTGTaGAGAGCATCACTGTGGGGACAGTCCTTGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: TPQCSLSSPGSL*RASLWGQSLSL Trigger: CAGGGACAAGGACTGTCCCCACAGTGATGCTCTCAACAGGGATCCTGGACTGGATAAGGAGCACTGTGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS TCA 72 bp | CCCTCTGAATTCTTTGCATTAAGTCACCGATCACCCTaGCAAGCACAGAGAACAGGCTCCTGCAGCCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: PSEFFALSHRSP*QAQRTGSCSQG Trigger: CCCCTGGCTGCAGGAGCCTGTTCTCTGTGCTTGTCAGGGTGATCGGTGACTTAATGCAAAGAATTCAGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS GCA 72 bp | GTGGCAATGCTGATCTCGTCTGAGAGATGGTCACAGTaGATGATGAGGTGTGTACCCAGAGTATGGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: VAMLISSERWSQ*MMRCVPRVWGL Trigger: CAGCCCCCATACTCTGGGTACACACCTCATCATGCACTGTGACCATCTCTCAGACGAGATCAGCATTGCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS GCA 72 bp | CACAGCCTTTGCCAAGGCATCTGCAACCACCGTGTGTaGCTCTGTGATGAGGTGGTCACAGTAATCAAACCA | + |
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Preference number: 6 (lower is better) Translates to: HSLCQGICNHRV*LCDEVVTVIKP Trigger: TGGTTTGATTACTGTGACCACCTCATCACAGAGGCACACACGGTGGTTGCAGATGCCTTGGCAAAGGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS TCA 72 bp | GAGAGAAGTTCAGGTAAGGACCGTGTGGGGGAAACTTaGCAAACGCAATGGCAGCCAGCTCCTTGCAGAATT | + |
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Preference number: 6 (lower is better) Translates to: ERSSGKDRVGET*QTQWQPAPCRI Trigger: AATTCTGCAAGGAGCTGGCTGCCATTGCGTTTGTCAAGTTTCCCCCACACGGTCCTTACCTGAACTTCTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS TCA 72 bp | AAGACTGAGGTCACTTGTAGGTTCAGGCTGTACGGCTaGTCCAAAATCCGGGCGATTCGATCAAAGAGCACT | + |
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Preference number: 6 (lower is better) Translates to: KTEVTCRFRLYG*SKIRAIRSKST Trigger: AGTGCTCTTTGATCGAATCGCCCGGATTTTGGATCAGCCGTACAGCCTGAACCTACAAGTGACCTCAGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS TCA 72 bp | ACCAGGAGCAGTTTGCCCGAAAACTGGGGTACCCTCTaGATTCTTTGCATTAAGTCACCGATCACCCTGACA | + |
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Preference number: 6 (lower is better) Translates to: TRSSLPENWGTL*ILCIKSPITLT Trigger: TGTCAGGGTGATCGGTGACTTAATGCAAAGAATTCAGAGGGTACCCCAGTTTTCGGGCAAACTGCTCCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS GCA 72 bp | TGCTGCTTCTCCTCATACACCAGGATGTCCAACATCTaGTTCAGTCGCCAGGGGATATCTGTTTTCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: CCFSSYTRMSNI*FSRQGISVFLA Trigger: AGCCAAGAAAACAGATATCCCCTGGCGACTGAAGCAGATGTTGGACATCCTGGTGTATGAGGAGAAGCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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| CDS TCA 72 bp | GGGTGTTTTCATCTGTGCTCTCGATATAGTAGTGTGTaGTGCCTTTCCAATGTTCCACGAAGGCCTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: GCFHLCSRYSSV*CLSNVPRRPAA Trigger: TGCTGCAGGCCTTCGTGGAACATTGGAAAGGCATCACACACTACTATATCGAGAGCACAGATGAAAACACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022690.10 |
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