Pregenerated sensors for FAM160B1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033478

Ensembl transcript IDs: ENSMUST00000036407.6, ENSMUST00000237170.2

Found 230 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 90 bp	GTCCTGCATGCACTGTTAGCGCAAGAGCTGAAGCTGACGTCCACCTaGCCGGAGGGGACGGTGGGCACACAGTCACCCGAAGAGCTTCCT	+
Preference number: 1 (lower is better) Translates to: VLHALLAQELKLTST*PEGTVGTQSPEELP Trigger: AGGAAGCTCTTCGGGTGACTGTGTGCCCACCGTCCCCTCCGGGCAGGTGGACGTCAGCTTCAGCTCTTGCGCTAACAGTGCATGCAGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR GCA 90 bp	CTCGGAACTGCCTGTGGGCGTCTCGGAGGTAGGTGTCATAGCCGGTaGCCTCCACGTGGTAGGAGGACTTTGCGTCATCTGGCACTAGAC	+
Preference number: 1 (lower is better) Translates to: LGTACGRLGGRCHSR*PPRGRRTLRHLALD Trigger: GTCTAGTGCCAGATGACGCAAAGTCCTCCTACCACGTGGAGGGCACCGGCTATGACACCTACCTCCGAGACGCCCACAGGCAGTTCCGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR TCA 90 bp	GTCACACTTCTCCAGTGGTTTGGGGGCTCCTGGCCACTCCCATCGTaGGCAGATAGCACAGTAGTCTCGGAACTGCCTGTGGGCGTCTCG	+
Preference number: 1 (lower is better) Translates to: VTLLQWFGGSWPLPS*ADSTVVSELPVGVS Trigger: CGAGACGCCCACAGGCAGTTCCGAGACTACTGTGCTATCTGCTCACGATGGGAGTGGCCAGGAGCCCCCAAACCACTGGAGAAGTGTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR GCA 90 bp	CCTTGGCTAACCAAGACATCCCTGCATCGGCACCACTCACATGCATaGACGCAGGCAAACAAGCACGCACGGACGCACGCACGCTCTGCT	+
Preference number: 1 (lower is better) Translates to: PWLTKTSLHRHHSHA*TQANKHARTHARSA Trigger: AGCAGAGCGTGCGTGCGTCCGTGCGTGCTTGTTTGCCTGCGTGCATGCATGTGAGTGGTGCCGATGCAGGGATGTCTTGGTTAGCCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR GCA 90 bp	CCACCATTTCCTGAAGCAGGACGTCTGAGGTCACTTGCCGGACGATaGGGTGCAGCAAGGCCGTCGAGGTCAGAATCCCCATCTCAGAGG	+
Preference number: 1 (lower is better) Translates to: PPFPEAGRLRSLAGR*GAARPSRSESPSQR Trigger: CCTCTGAGATGGGGATTCTGACCTCGACGGCCTTGCTGCACCGCATCGTCCGGCAAGTGACCTCAGACGTCCTGCTTCAGGAAATGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR CCA 90 bp	GAGGGGACGGTGGGCACACAGTCACCCGAAGAGCTTCCTCATCGGTaGCCTGGGAATCCAGACCTTCACAGCACTGCTAGTGACCCACAT	+
Preference number: 1 (lower is better) Translates to: EGTVGTQSPEELPHR*PGNPDLHSTASDPH Trigger: ATGTGGGTCACTAGCAGTGCTGTGAAGGTCTGGATTCCCAGGCCACCGATGAGGAAGCTCTTCGGGTGACTGTGTGCCCACCGTCCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR TCA 90 bp	CTGTTCTCCGAGGATGAAGACCACCATTTCCTGAAGCAGGACGTCTaGGGTCACTTGCCGGACGATGCGGTGCAGCAAGGCCGTCGAGGT	+
Preference number: 1 (lower is better) Translates to: LFSEDEDHHFLKQDV*GHLPDDAVQQGRRG Trigger: ACCTCGACGGCCTTGCTGCACCGCATCGTCCGGCAAGTGACCTCAGACGTCCTGCTTCAGGAAATGGTGGTCTTCATCCTCGGAGAACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR TCA 90 bp	CCAAGCAGCCGCTTTCTGACCAGGAGAAGCTTGGGGGTGAAGTCTTaGATGCGCTGGATTCGAACCATGAGGTCACCAACAACCCTGACA	+
Preference number: 1 (lower is better) Translates to: PSSRFLTRRSLGVKS*MRWIRTMRSPTTLT Trigger: TGTCAGGGTTGTTGGTGACCTCATGGTTCGAATCCAGCGCATTCAAGACTTCACCCCCAAGCTTCTCCTGGTCAGAAAGCGGCTGCTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR CCA 90 bp	TTGCAGAACTCCTCTAACACAATCACACCCTCCAGCAGTGTGATGTaGTCAACGATGGGGCCTTCAGGCTCCAAGCCAAGCAGCCGCTTT	+
Preference number: 1 (lower is better) Translates to: LQNSSNTITPSSSVM*STMGPSGSKPSSRF Trigger: AAAGCGGCTGCTTGGCTTGGAGCCTGAAGGCCCCATCGTTGACCACATCACACTGCTGGAGGGTGTGATTGTGTTAGAGGAGTTCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR TCA 90 bp	AGGTCAGAATCCCCATCTCAGAGGTCTGCATCAGCTGGGGTTCCATaGCACCAACAAAGAACCTTTCGTGGATGGCTTTGGCGAGAGCAA	+
Preference number: 1 (lower is better) Translates to: RSESPSQRSASAGVP*HQQRTFRGWLWREQ Trigger: TTGCTCTCGCCAAAGCCATCCACGAAAGGTTCTTTGTTGGTGTCATGGAACCCCAGCTGATGCAGACCTCTGAGATGGGGATTCTGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR CCA 90 bp	CCAGCCAAGTTCCTGACATCACAAGCTTTGCAGCTTCTCGGTCACTaGAGACCCAGTCTCCTCAGGTCTGATTGTTTCCTGGGTTTGAAC	+
Preference number: 1 (lower is better) Translates to: PAKFLTSQALQLLGH*RPSLLRSDCFLGLN Trigger: GTTCAAACCCAGGAAACAATCAGACCTGAGGAGACTGGGTCTCCAGTGACCGAGAAGCTGCAAAGCTTGTGATGTCAGGAACTTGGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR CCA 90 bp	CTGTTGACCACTTTATGCACTTCCGTCTTGCCATCATTTTTGGGATaGTCTGGGCTGGTGCGGGGTGAACAAATCCACTCTTGGTTGGGC	+
Preference number: 1 (lower is better) Translates to: LLTTLCTSVLPSFLG*SGLVRGEQIHSWLG Trigger: GCCCAACCAAGAGTGGATTTGTTCACCCCGCACCAGCCCAGACCATCCCAAAAATGATGGCAAGACGGAAGTGCATAAAGTGGTCAACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR TCA 90 bp	GAAGGCCACACAGGGGACCGCTGCCTCCCACTCTGGTTCTCTTTCTaGCTTAACGGATTTCTTGAAGGAACCGAGAAAGATTCCCATTGT	+
Preference number: 1 (lower is better) Translates to: EGHTGDRCLPLWFSF*LNGFLEGTEKDSHC Trigger: ACAATGGGAATCTTTCTCGGTTCCTTCAAGAAATCCGTTAAGTCAGAAAGAGAACCAGAGTGGGAGGCAGCGGTCCCCTGTGTGGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR GCA 90 bp	TATGCACTTCCGTCTTGCCATCATTTTTGGGATGGTCTGGGCTGGTaGGGGGTGAACAAATCCACTCTTGGTTGGGCAGAGTGTTATCTG	+
Preference number: 1 (lower is better) Translates to: YALPSCHHFWDGLGW*GVNKSTLGWAECYL Trigger: CAGATAACACTCTGCCCAACCAAGAGTGGATTTGTTCACCCCGCACCAGCCCAGACCATCCCAAAAATGATGGCAAGACGGAAGTGCATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR CCA 90 bp	TGTTTCCTGGGTTTGAACAACGTGCAACCATACAGGGAATCATTATaGCAGAGCGAGAGGAAGCAACACCAGGCCTCACTGAGAGCAGTC	+
Preference number: 1 (lower is better) Translates to: CFLGLNNVQPYRESL*QSERKQHQASLRAV Trigger: GACTGCTCTCAGTGAGGCCTGGTGTTGCTTCCTCTCGCTCTGCCATAATGATTCCCTGTATGGTTGCACGTTGTTCAAACCCAGGAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR GCA 90 bp	TGCATGCACGCAGGCAAACAAGCACGCACGGACGCACGCACGCTCTaGTTCCTTAAATCCTTAAGGTGTAAACTGAACATGAAGAGACTT	+
Preference number: 1 (lower is better) Translates to: CMHAGKQARTDARTL*FLKSLRCKLNMKRL Trigger: AAGTCTCTTCATGTTCAGTTTACACCTTAAGGATTTAAGGAAGCAGAGCGTGCGTGCGTCCGTGCGTGCTTGTTTGCCTGCGTGCATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR CCA 90 bp	CTTTATGCACTTCCGTCTTGCCATCATTTTTGGGATGGTCTGGGCTaGTGCGGGGTGAACAAATCCACTCTTGGTTGGGCAGAGTGTTAT	+
Preference number: 1 (lower is better) Translates to: LYALPSCHHFWDGLG*CGVNKSTLGWAECY Trigger: ATAACACTCTGCCCAACCAAGAGTGGATTTGTTCACCCCGCACCAGCCCAGACCATCCCAAAAATGATGGCAAGACGGAAGTGCATAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR GCA 90 bp	TCGACGGTAGCAACATCTGAAGGAGGAAGAGCTGTGGGGGATTCTTaGAGAAACTTGTCAATAAATACAACAGAGGGAACCACTGCTCGC	+
Preference number: 1 (lower is better) Translates to: STVATSEGGRAVGDS*RNLSINTTEGTTAR Trigger: GCGAGCAGTGGTTCCCTCTGTTGTATTTATTGACAAGTTTCTGCAAGAATCCCCCACAGCTCTTCCTCCTTCAGATGTTGCTACCGTCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR CCA 90 bp	TTTTTGGGATGGTCTGGGCTGGTGCGGGGTGAACAAATCCACTCTTaGTTGGGCAGAGTGTTATCTGGTGAAATGTCAGTAAATAATGGA	+
Preference number: 1 (lower is better) Translates to: FLGWSGLVRGEQIHS*LGRVLSGEMSVNNG Trigger: TCCATTATTTACTGACATTTCACCAGATAACACTCTGCCCAACCAAGAGTGGATTTGTTCACCCCGCACCAGCCCAGACCATCCCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR TCA 90 bp	CCTTATCTCAAAATCACCACCATCAAAGTCGACGGTAGCAACATCTaGAGGAGGAAGAGCTGTGGGGGATTCTTGCAGAAACTTGTCAAT	+
Preference number: 1 (lower is better) Translates to: PYLKITTIKVDGSNI*RRKSCGGFLQKLVN Trigger: ATTGACAAGTTTCTGCAAGAATCCCCCACAGCTCTTCCTCCTTCAGATGTTGCTACCGTCGACTTTGATGGTGGTGATTTTGAGATAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR GCA 90 bp	CCACAGAGCACTATGAGAACATTAACAAACACCTGTACCTCTCAATaGCTTATCTCAAAATCACCACCATCAAAGTCGACGGTAGCAACA	+
Preference number: 1 (lower is better) Translates to: PQSTMRTLTNTCTSQ*LISKSPPSKSTVAT Trigger: TGTTGCTACCGTCGACTTTGATGGTGGTGATTTTGAGATAAGGCATTGAGAGGTACAGGTGTTTGTTAATGTTCTCATAGTGCTCTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR TCA 90 bp	TGCTCAAACATCCTCAGGGTCATGATGCTGATCTCATCAGATATGTaGTCGCAATGTTCGATTAACCTATGTCTTAGAGGATGTCTGCTA	+
Preference number: 1 (lower is better) Translates to: CSNILRVMMLISSDM*SQCSINLCLRGCLL Trigger: TAGCAGACATCCTCTAAGACATAGGTTAATCGAACATTGCGATCACATATCTGATGAGATCAGCATCATGACCCTGAGGATGTTTGAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR TCA 90 bp	ACATACTTATGTGAGCACAACAGTAGAGACTGGCGAAGACAAATCTaGTTCGGTCAAGTGAAAAATGGCTCATTACTGAAAAGAAACCAG	+
Preference number: 1 (lower is better) Translates to: TYLCEHNSRDWRRQI*FGQVKNGSLLKRNQ Trigger: CTGGTTTCTTTTCAGTAATGAGCCATTTTTCACTTGACCGAATCAGATTTGTCTTCGCCAGTCTCTACTGTTGTGCTCACATAAGTATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR GCA 90 bp	CTGAAAAGAAACCAGACTACATTGTTAGAAAGTGGGGAAACAATGTaGATGCTTATTTCCTGTTTCTACAAACACAAAGCAGGCTGGAAC	+
Preference number: 1 (lower is better) Translates to: LKRNQTTLLESGETM*MLISCFYKHKAGWN Trigger: GTTCCAGCCTGCTTTGTGTTTGTAGAAACAGGAAATAAGCATGCACATTGTTTCCCCACTTTCTAACAATGTAGTCTGGTTTCTTTTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR TCA 90 bp	CCACCTGCCCGGAGGGGACGGTGGGCACACAGTCACCCGAAGAGCTTCCTCATCCATCGTAACGGCCAGTaGAGAGGAAGAGGGGCTGCT	+
Preference number: 2 (lower is better) Translates to: PPARRGRWAHSHPKSFLIHRNGQ*RGRGAA Trigger: AGCAGCCCCTCTTCCTCTTCACTGGCCGTTACGATG...GATGAGGAAGCTCTTCGGGTGACTGTGTGCCCACCGTCCCCTCCGGGCAGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR TCA 90 bp	CCACCTGCCCGGAGGGGACGGTGGGCACACAGTCACCCGAAGAGCTTCCTCATCGGCTGGAACTCAGTCTaGCAACCACTTGCTAAGGTG	+
Preference number: 2 (lower is better) Translates to: PPARRGRWAHSHPKSFLIGWNSV*QPLAKV Trigger: CACCTTAGCAAGTGGTTGTCAGACTGAGTTCCAGCC...GATGAGGAAGCTCTTCGGGTGACTGTGTGCCCACCGTCCCCTCCGGGCAGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR CCA 90 bp	GGCACACAGTCACCCGAAGAGCTTCCTCATCGGTGGCCTGGGAATCCAGACCTTACTTCTCCAGTGGTTTaGGGGCTCCTGGCCACTCCC	+
Preference number: 2 (lower is better) Translates to: GTQSPEELPHRWPGNPDLTSPVV*GLLATP Trigger: GGGAGTGGCCAGGAGCCCCCAAACCACTGGAGAAGT...AAGGTCTGGATTCCCAGGCCACCGATGAGGAAGCTCTTCGGGTGACTGTGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR-3UTR CCA 90 bp	CCCCAGAGCCAGGTCCTGCTAACACTGCCACACACGTCAGTACGGAAGTCAACCCAGCTTCTCGGTCACTaGAGACCCAGTCTCCTCAGG	+
Preference number: 2 (lower is better) Translates to: PQSQVLLTLPHTSVRKSTQLLGH*RPSLLR Trigger: CCTGAGGAGACTGGGTCTCCAGTGACCGAGAAGCTG...GGTTGACTTCCGTACTGACGTGTGTGGCAGTGTTAGCAGGACCTGGCTCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR CCA 90 bp	CCACCTGCCCGGAGGGGACGGTGGGCACACAGTCACCCGAAGAGCTTCCTCATCAAGGAGGAAGAGCTGTaGGGGATTCTTGCAGAAACT	+
Preference number: 2 (lower is better) Translates to: PPARRGRWAHSHPKSFLIKEEEL*GILAET Trigger: AGTTTCTGCAAGAATCCCCCACAGCTCTTCCTCCTT...GATGAGGAAGCTCTTCGGGTGACTGTGTGCCCACCGTCCCCTCCGGGCAGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR CCA 90 bp	GGCACACAGTCACCCGAAGAGCTTCCTCATCGGTGGCCTGGGAATCCAGACCTTCAGGCTAACCTGAGCTaGCTGCAGGGCAGGTCATTA	+
Preference number: 2 (lower is better) Translates to: GTQSPEELPHRWPGNPDLQANLS*LQGRSL Trigger: TAATGACCTGCCCTGCAGCCAGCTCAGGTTAGCCTG...AAGGTCTGGATTCCCAGGCCACCGATGAGGAAGCTCTTCGGGTGACTGTGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR CCA 90 bp	GGCACACAGTCACCCGAAGAGCTTCCTCATCGGTGGCCTGGGAATCCAGACCTTTTTCGTGGATGGCTTTaGCGAGAGCAACAGCAGCAG	+
Preference number: 2 (lower is better) Translates to: GTQSPEELPHRWPGNPDLFRGWL*REQQQQ Trigger: CTGCTGCTGTTGCTCTCGCCAAAGCCATCCACGAAA...AAGGTCTGGATTCCCAGGCCACCGATGAGGAAGCTCTTCGGGTGACTGTGTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR-3UTR CCA 90 bp	CCACCTGCCCGGAGGGGACGGTGGGCACACAGTCACCCGAAGAGCTTCCTCATCAGAGGATGTGTTCATTaGGCTTTTGTAGGAGATGCT	+
Preference number: 2 (lower is better) Translates to: PPARRGRWAHSHPKSFLIRGCVH*AFVGDA Trigger: AGCATCTCCTACAAAAGCCCAATGAACACATCCTCT...GATGAGGAAGCTCTTCGGGTGACTGTGTGCCCACCGTCCCCTCCGGGCAGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR CAA 90 bp	GCCAAGCAGCCGCTTTCTGACCAGGAGAAGCTTGGGGGTGAAGTCTaGAATGCGCTGGATTCGAACCATGAGGTCACCAACAACCCTGAC	+
Preference number: 2 (lower is better) Translates to: AKQPLSDQEKLGGEV*NALDSNHEVTNNPD Trigger: GTCAGGGTTGTTGGTGACCTCATGGTTCGAATCCAGCGCATTCAAGACTTCACCCCCAAGCTTCTCCTGGTCAGAAAGCGGCTGCTTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR-3UTR TCA 90 bp	CTTTGCAGCTTCTCGGTCACTGGAGACCCAGTCTCCTCAGGTCTGATTGTTTCCAACACCAGGCCTCACTaGGAGCAGTCACGCAGTGGA	+
Preference number: 2 (lower is better) Translates to: LCSFSVTGDPVSSGLIVSNTRPH*EQSRSG Trigger: TCCACTGCGTGACTGCTCTCAGTGAGGCCTGGTGTT...GGAAACAATCAGACCTGAGGAGACTGGGTCTCCAGTGACCGAGAAGCTGCAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR TCA 90 bp	CCCCAGAGCCAGGTCCTGCTAACACTGCCACACACGTCAGTACGGAAGTCAACCCAGTCTCCTCAGGTCTaGTTGTTTCCTGGGTTTGAA	+
Preference number: 2 (lower is better) Translates to: PQSQVLLTLPHTSVRKSTQSPQV*LFPGFE Trigger: TTCAAACCCAGGAAACAATCAGACCTGAGGAGACTG...GGTTGACTTCCGTACTGACGTGTGTGGCAGTGTTAGCAGGACCTGGCTCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR TCA 90 bp	GGCACACAGTCACCCGAAGAGCTTCCTCATCGGTGGCCTGGGAATCCAGACCTTACTGGGAGCCACGCATaGAAATCAACCACAAATATG	+
Preference number: 2 (lower is better) Translates to: GTQSPEELPHRWPGNPDLTGSHA*KSTTNM Trigger: CATATTTGTGGTTGATTTTCATGCGTGGCTCCCAGT...AAGGTCTGGATTCCCAGGCCACCGATGAGGAAGCTCTTCGGGTGACTGTGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR TCA 90 bp	CACCTCACTGGTAGCCCACAGAGCACTATGAGAACATTAACAAACACCTGTACCGAGAACAGTGAACACTaGGAGGCCCACTGCACGCCG	+
Preference number: 2 (lower is better) Translates to: HLTGSPQSTMRTLTNTCTENSEH*EAHCTP Trigger: CGGCGTGCAGTGGGCCTCTCAGTGTTCACTGTTCTC...GGTACAGGTGTTTGTTAATGTTCTCATAGTGCTCTGTGGGCTACCAGTGAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR CCA 90 bp	CCCCAGAGCCAGGTCCTGCTAACACTGCCACACACGTCAGTACGGAAGTCAACCAGAGCAGTCACGCAGTaGATTCTTAACATTCTGTGC	+
Preference number: 2 (lower is better) Translates to: PQSQVLLTLPHTSVRKSTRAVTQ*ILNILC Trigger: GCACAGAATGTTAAGAATCCACTGCGTGACTGCTCT...GGTTGACTTCCGTACTGACGTGTGTGGCAGTGTTAGCAGGACCTGGCTCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR CCA 90 bp	CAGCCCGTTCTCCACCACGTCCTTGTCTTCCGGGCAGGAAGGTTTGTTCTCCGTAGAGCAGTCACGCAGTaGATTCTTAACATTCTGTGC	+
Preference number: 2 (lower is better) Translates to: QPVLHHVLVFRAGRFVLRRAVTQ*ILNILC Trigger: GCACAGAATGTTAAGAATCCACTGCGTGACTGCTCT...ACGGAGAACAAACCTTCCTGCCCGGAAGACAAGGACGTGGTGGAGAACGGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR-3UTR CCA 90 bp	TCGAACCATGAGGTCACCAACAACCCTGACAATCACAGAGAAGAGAGACCTGCAGTCACACTTCTCCAGTaGTTTGGGGGCTCCTGGCCA	+
Preference number: 2 (lower is better) Translates to: SNHEVTNNPDNHREERPAVTLLQ*FGGSWP Trigger: TGGCCAGGAGCCCCCAAACCACTGGAGAAGTGTGAC...TGCAGGTCTCTCTTCTCTGTGATTGTCAGGGTTGTTGGTGACCTCATGGTTCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR CAA 90 bp	AGCTGGGGTTCCATGACACCAACAAAGAACCTTTCGTGGATGGCTTaGGCGAGAGCAACAGCAGCAGTCTTTTGTGCCTCCTTGATGAGC	+
Preference number: 2 (lower is better) Translates to: SWGSMTPTKNLSWMA*ARATAAVFCASLMS Trigger: GCTCATCAAGGAGGCACAAAAGACTGCTGCTGTTGCTCTCGCCAAAGCCATCCACGAAAGGTTCTTTGTTGGTGTCATGGAACCCCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR-3UTR TCA 90 bp	GGGCTGCTTAACGCTTCAATAAGGACGAGGACAGGAGCTCCAGAACCACAGCCACAGTCTCCTCAGGTCTaGTTGTTTCCTGGGTTTGAA	+
Preference number: 2 (lower is better) Translates to: GLLNASIRTRTGAPEPQPQSPQV*LFPGFE Trigger: TTCAAACCCAGGAAACAATCAGACCTGAGGAGACTG...TGGCTGTGGTTCTGGAGCTCCTGTCCTCGTCCTTATTGAAGCGTTAAGCAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR TCA 90 bp	TCGAACCATGAGGTCACCAACAACCCTGACAATCACAGAGAAGAGAGACCTGCATGGCCACTCCCATCGTaGGCAGATAGCACAGTAGTC	+
Preference number: 2 (lower is better) Translates to: SNHEVTNNPDNHREERPAWPLPS*ADSTVV Trigger: GACTACTGTGCTATCTGCTCACGATGGGAGTGGCCA...TGCAGGTCTCTCTTCTCTGTGATTGTCAGGGTTGTTGGTGACCTCATGGTTCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR-3UTR GCA 90 bp	CCCCAGAGCCAGGTCCTGCTAACACTGCCACACACGTCAGTACGGAAGTCAACCTATGCACTTCCGTCTTaGCATCATTTTTGGGATGGT	+
Preference number: 2 (lower is better) Translates to: PQSQVLLTLPHTSVRKSTYALPS*HHFWDG Trigger: ACCATCCCAAAAATGATGGCAAGACGGAAGTGCATA...GGTTGACTTCCGTACTGACGTGTGTGGCAGTGTTAGCAGGACCTGGCTCTGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR-3UTR TCA 90 bp	GTTTCTACAAACACAAAGCAGGCTGGAACTCAGTCTGACAACCACTTGCTAAGGAACACCAGGCCTCACTaGGAGCAGTCACGCAGTGGA	+
Preference number: 2 (lower is better) Translates to: VSTNTKQAGTQSDNHLLRNTRPH*EQSRSG Trigger: TCCACTGCGTGACTGCTCTCAGTGAGGCCTGGTGTT...CCTTAGCAAGTGGTTGTCAGACTGAGTTCCAGCCTGCTTTGTGTTTGTAGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR TCA 90 bp	GGAGTCGATGCTGCTACGCACCCAGCTCCTCCTCCAGACTCTCGATGGTTCCTCATCTCATCAGATATGTaGTCGCAATGTTCGATTAAC	+
Preference number: 2 (lower is better) Translates to: GVDAATHPAPPPDSRWFLISSDM*SQCSIN Trigger: GTTAATCGAACATTGCGATCACATATCTGATGAGAT...GAGGAACCATCGAGAGTCTGGAGGAGGAGCTGGGTGCGTAGCAGCATCGACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR-3UTR CCA 90 bp	AAGGGAACAAGATGTCCGTGTGTCCTGCAGCTGTACCCTGCACCTTGGCTAACCTACAGGGAATCATTATaGCAGAGCGAGAGGAAGCAA	+
Preference number: 2 (lower is better) Translates to: KGTRCPCVLQLYPAPWLTYRESL*QSERKQ Trigger: TTGCTTCCTCTCGCTCTGCCATAATGATTCCCTGTA...GGTTAGCCAAGGTGCAGGGTACAGCTGCAGGACACACGGACATCTTGTTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR CCA 90 bp	AAGGGAACAAGATGTCCGTGTGTCCTGCAGCTGTACCCTGCACCTTGGCTAACCAAATCCACTCTTGGTTaGGCAGAGTGTTATCTGGTG	+
Preference number: 2 (lower is better) Translates to: KGTRCPCVLQLYPAPWLTKSTLG*AECYLV Trigger: CACCAGATAACACTCTGCCCAACCAAGAGTGGATTT...GGTTAGCCAAGGTGCAGGGTACAGCTGCAGGACACACGGACATCTTGTTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR-3UTR TCA 90 bp	GTTTCTACAAACACAAAGCAGGCTGGAACTCAGTCTGACAACCACTTGCTAAGGTCAAACCCAGCTCCGTaGCTTGTGCTGACTCTGGGT	+
Preference number: 2 (lower is better) Translates to: VSTNTKQAGTQSDNHLLRSNPAP*LVLTLG Trigger: ACCCAGAGTCAGCACAAGTCACGGAGCTGGGTTTGA...CCTTAGCAAGTGGTTGTCAGACTGAGTTCCAGCCTGCTTTGTGTTTGTAGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR GCA 90 bp	GTTTCTACAAACACAAAGCAGGCTGGAACTCAGTCTGACAACCACTTGCTAAGGCCCATCTCAGAGGTCTaGATCAGCTGGGGTTCCATG	+
Preference number: 2 (lower is better) Translates to: VSTNTKQAGTQSDNHLLRPISEV*ISWGSM Trigger: CATGGAACCCCAGCTGATGCAGACCTCTGAGATGGG...CCTTAGCAAGTGGTTGTCAGACTGAGTTCCAGCCTGCTTTGTGTTTGTAGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR-3UTR CCA 90 bp	GGGCTGCTTAACGCTTCAATAAGGACGAGGACAGGAGCTCCAGAACCACAGCCAGAACAAATCCACTCTTaGTTGGGCAGAGTGTTATCT	+
Preference number: 2 (lower is better) Translates to: GLLNASIRTRTGAPEPQPEQIHS*LGRVLS Trigger: AGATAACACTCTGCCCAACCAAGAGTGGATTTGTTC...TGGCTGTGGTTCTGGAGCTCCTGTCCTCGTCCTTATTGAAGCGTTAAGCAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR CAA 90 bp	GCAACATCTGAAGGAGGAAGAGCTGTGGGGGATTCTTGCAGAAACTaGTCAATAAATACAACAGAGGGAACCACTGCTCGCTGCTCAGAG	+
Preference number: 2 (lower is better) Translates to: ATSEGGRAVGDSCRN*SINTTEGTTARCSE Trigger: CTCTGAGCAGCGAGCAGTGGTTCCCTCTGTTGTATTTATTGACAAGTTTCTGCAAGAATCCCCCACAGCTCTTCCTCCTTCAGATGTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR TCA 90 bp	ACAAAAATGCCAGCCAAGTTCCTGACATCACAAGCTTTGCAGCTTCTCGGTCACGGTCACCAACAACCCTaGCAATCACAGAGAAGAGAG	+
Preference number: 2 (lower is better) Translates to: TKMPAKFLTSQALQLLGHGHQQP*QSQRRE Trigger: CTCTCTTCTCTGTGATTGTCAGGGTTGTTGGTGACC...GTGACCGAGAAGCTGCAAAGCTTGTGATGTCAGGAACTTGGCTGGCATTTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR CAA 90 bp	TTGGGATGGTCTGGGCTGGTGCGGGGTGAACAAATCCACTCTTGGTaGGGCAGAGTGTTATCTGGTGAAATGTCAGTAAATAATGGATCT	+
Preference number: 2 (lower is better) Translates to: LGWSGLVRGEQIHSW*GRVLSGEMSVNNGS Trigger: AGATCCATTATTTACTGACATTTCACCAGATAACACTCTGCCCAACCAAGAGTGGATTTGTTCACCCCGCACCAGCCCAGACCATCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR-3UTR TCA 90 bp	TGCGGGGTGAACAAATCCACTCTTGGTTGGGCAGAGTGTTATCTGGTGAAATGTTCAGCTGGGGTTCCATaGCACCAACAAAGAACCTTT	+
Preference number: 2 (lower is better) Translates to: CGVNKSTLGWAECYLVKCSAGVP*HQQRTF Trigger: AAAGGTTCTTTGTTGGTGTCATGGAACCCCAGCTGA...ACATTTCACCAGATAACACTCTGCCCAACCAAGAGTGGATTTGTTCACCCCGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR-3UTR CCA 90 bp	TGCGGGGTGAACAAATCCACTCTTGGTTGGGCAGAGTGTTATCTGGTGAAATGTACAAAGAACCTTTCGTaGATGGCTTTGGCGAGAGCA	+
Preference number: 2 (lower is better) Translates to: CGVNKSTLGWAECYLVKCTKNLS*MALARA Trigger: TGCTCTCGCCAAAGCCATCCACGAAAGGTTCTTTGT...ACATTTCACCAGATAACACTCTGCCCAACCAAGAGTGGATTTGTTCACCCCGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR CAA 90 bp	ATTAAAAGAACAAAAATGCCAGCCAAGTTCCTGACATCACAAGCTTaGCAGCTTCTCGGTCACTGGAGACCCAGTCTCCTCAGGTCTGAT	+
Preference number: 2 (lower is better) Translates to: IKRTKMPAKFLTSQA*QLLGHWRPSLLRSD Trigger: ATCAGACCTGAGGAGACTGGGTCTCCAGTGACCGAGAAGCTGCAAAGCTTGTGATGTCAGGAACTTGGCTGGCATTTTTGTTCTTTTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR TCA 90 bp	ACAAGATGTCCGTGTGTCCTGCAGCTGTACCCTGCACCTTGGCTAACCAAGACAAATCAACCACAAATATaGCTGTGTGCACAAAAGAGT	+
Preference number: 2 (lower is better) Translates to: TRCPCVLQLYPAPWLTKTNQPQI*LCAQKS Trigger: ACTCTTTTGTGCACACAGTCATATTTGTGGTTGATT...TGTCTTGGTTAGCCAAGGTGCAGGGTACAGCTGCAGGACACACGGACATCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR TCA 90 bp	GAAAGTGGGGAAACAATGTGCATGCTTATTTCCTGTTTCTACAAACACAAAGCACATCGTAACGGCCAGTaGAGAGGAAGAGGGGCTGCT	+
Preference number: 2 (lower is better) Translates to: ESGETMCMLISCFYKHKAHRNGQ*RGRGAA Trigger: AGCAGCCCCTCTTCCTCTTCACTGGCCGTTACGATG...TGCTTTGTGTTTGTAGAAACAGGAAATAAGCATGCACATTGTTTCCCCACTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR GCA 90 bp	CAGGAGGCCGACAGAGTATCAGTGACAGTATTTTACAGGGCCCAGAAGAGGATTGCTGTGGGGGATTCTTaGAGAAACTTGTCAATAAAT	+
Preference number: 2 (lower is better) Translates to: QEADRVSVTVFYRAQKRIAVGDS*RNLSIN Trigger: ATTTATTGACAAGTTTCTGCAAGAATCCCCCACAGC...AATCCTCTTCTGGGCCCTGTAAAATACTGTCACTGATACTCTGTCGGCCTCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR CCA 90 bp	CACCTCACTGGTAGCCCACAGAGCACTATGAGAACATTAACAAACACCTGTACCACTCAACACAGTCTATaGAAGAAATCCTGCAGTCTC	+
Preference number: 2 (lower is better) Translates to: HLTGSPQSTMRTLTNTCTTQHSL*KKSCSL Trigger: GAGACTGCAGGATTTCTTCCATAGACTGTGTTGAGT...GGTACAGGTGTTTGTTAATGTTCTCATAGTGCTCTGTGGGCTACCAGTGAGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR GCA 90 bp	CACCTCACTGGTAGCCCACAGAGCACTATGAGAACATTAACAAACACCTGTACCGCGCGTGGAAAAATATaGCAAATATTCTGTTTAATG	+
Preference number: 2 (lower is better) Translates to: HLTGSPQSTMRTLTNTCTARGKI*QIFCLM Trigger: CATTAAACAGAATATTTGGCATATTTTTCCACGCGC...GGTACAGGTGTTTGTTAATGTTCTCATAGTGCTCTGTGGGCTACCAGTGAGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR GCA 72 bp	CCTGAAGCAGGACGTCTGAGGTCACTTGCCGGACGATaGGGTGCAGCAAGGCCGTCGAGGTCAGAATCCCCA	+
Preference number: 3 (lower is better) Translates to: PEAGRLRSLAGR*GAARPSRSESP Trigger: TGGGGATTCTGACCTCGACGGCCTTGCTGCACCGCATCGTCCGGCAAGTGACCTCAGACGTCCTGCTTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR GCA 72 bp	GCCTGTGGGCGTCTCGGAGGTAGGTGTCATAGCCGGTaGCCTCCACGTGGTAGGAGGACTTTGCGTCATCTG	+
Preference number: 3 (lower is better) Translates to: ACGRLGGRCHSR*PPRGRRTLRHL Trigger: CAGATGACGCAAAGTCCTCCTACCACGTGGAGGGCACCGGCTATGACACCTACCTCCGAGACGCCCACAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR CCA 72 bp	CAGCAAACACGCAGGGGAGAAGCTTTGCCGAGCTCATaGCGTGGGCGCCATAGGTCCAGCCGAGAAGCGAAG	+
Preference number: 3 (lower is better) Translates to: QQTRRGEALPSS*RGRHRSSREAK Trigger: CTTCGCTTCTCGGCTGGACCTATGGCGCCCACGCCATGAGCTCGGCAAAGCTTCTCCCCTGCGTGTTTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR CAA 90 bp	CCACCTGCCCGGAGGGGACGGTGGGCACACAGTCACCCGAAGAGCTTCCTCATCCTGACATCACAAGCTTaGCAGCTTCTCGGTCACTGG	+
Preference number: 3 (lower is better) Translates to: PPARRGRWAHSHPKSFLILTSQA*QLLGHW Trigger: CCAGTGACCGAGAAGCTGCAAAGCTTGTGATGTCAG...GATGAGGAAGCTCTTCGGGTGACTGTGTGCCCACCGTCCCCTCCGGGCAGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR-3UTR CAA 90 bp	GGCACACAGTCACCCGAAGAGCTTCCTCATCGGTGGCCTGGGAATCCAGACCTTCACTTCTCCAGTGGTTaGGGGGCTCCTGGCCACTCC	+
Preference number: 3 (lower is better) Translates to: GTQSPEELPHRWPGNPDLHFSSG*GAPGHS Trigger: GGAGTGGCCAGGAGCCCCCAAACCACTGGAGAAGTG...AAGGTCTGGATTCCCAGGCCACCGATGAGGAAGCTCTTCGGGTGACTGTGTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR GCA 72 bp	AGCAGGACGTCTGAGGTCACTTGCCGGACGATGCGGTaGAGCAAGGCCGTCGAGGTCAGAATCCCCATCTCA	+
Preference number: 3 (lower is better) Translates to: SRTSEVTCRTMR*SKAVEVRIPIS Trigger: TGAGATGGGGATTCTGACCTCGACGGCCTTGCTGCACCGCATCGTCCGGCAAGTGACCTCAGACGTCCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR TCA 72 bp	CTCCAGTGGTTTGGGGGCTCCTGGCCACTCCCATCGTaGGCAGATAGCACAGTAGTCTCGGAACTGCCTGTG	+
Preference number: 3 (lower is better) Translates to: LQWFGGSWPLPS*ADSTVVSELPV Trigger: CACAGGCAGTTCCGAGACTACTGTGCTATCTGCTCACGATGGGAGTGGCCAGGAGCCCCCAAACCACTGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR GCA 72 bp	ACCAAGACATCCCTGCATCGGCACCACTCACATGCATaGACGCAGGCAAACAAGCACGCACGGACGCACGCA	+
Preference number: 3 (lower is better) Translates to: TKTSLHRHHSHA*TQANKHARTHA Trigger: TGCGTGCGTCCGTGCGTGCTTGTTTGCCTGCGTGCATGCATGTGAGTGGTGCCGATGCAGGGATGTCTTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR GCA 72 bp	GCTAACCAAGACATCCCTGCATCGGCACCACTCACATaGATGCACGCAGGCAAACAAGCACGCACGGACGCA	+
Preference number: 3 (lower is better) Translates to: ANQDIPASAPLT*MHAGKQARTDA Trigger: TGCGTCCGTGCGTGCTTGTTTGCCTGCGTGCATGCATGTGAGTGGTGCCGATGCAGGGATGTCTTGGTTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR GCA 72 bp	GGGAACAAGATGTCCGTGTGTCCTGCAGCTGTACCCTaGACCTTGGCTAACCAAGACATCCCTGCATCGGCA	+
Preference number: 3 (lower is better) Translates to: GNKMSVCPAAVP*TLANQDIPASA Trigger: TGCCGATGCAGGGATGTCTTGGTTAGCCAAGGTGCAGGGTACAGCTGCAGGACACACGGACATCTTGTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR CCA 72 bp	AGATGTCCGTGTGTCCTGCAGCTGTACCCTGCACCTTaGCTAACCAAGACATCCCTGCATCGGCACCACTCA	+
Preference number: 3 (lower is better) Translates to: RCPCVLQLYPAP*LTKTSLHRHHS Trigger: TGAGTGGTGCCGATGCAGGGATGTCTTGGTTAGCCAAGGTGCAGGGTACAGCTGCAGGACACACGGACATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR CCA 72 bp	ACTCGTGCGTGTGTGGGTGAGGGAACAGCGAGAGTCTaGACAGCACTGAGGTCACCTGCAGATTCACATCGT	+
Preference number: 3 (lower is better) Translates to: TRACVGEGTARV*TALRSPADSHR Trigger: ACGATGTGAATCTGCAGGTGACCTCAGTGCTGTCCAGACTCTCGCTGTTCCCTCACCCACACACGCACGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR-3UTR CAA 90 bp	GGGCTGCTTAACGCTTCAATAAGGACGAGGACAGGAGCTCCAGAACCACAGCCACGTGGTAGGAGGACTTaGCGTCATCTGGCACTAGAC	+
Preference number: 3 (lower is better) Translates to: GLLNASIRTRTGAPEPQPRGRRT*RHLALD Trigger: GTCTAGTGCCAGATGACGCAAAGTCCTCCTACCACG...TGGCTGTGGTTCTGGAGCTCCTGTCCTCGTCCTTATTGAAGCGTTAAGCAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR GCA 72 bp	CCGTCTTGCCATCATTTTTGGGATGGTCTGGGCTGGTaGGGGGTGAACAAATCCACTCTTGGTTGGGCAGAG	+
Preference number: 3 (lower is better) Translates to: PSCHHFWDGLGW*GVNKSTLGWAE Trigger: CTCTGCCCAACCAAGAGTGGATTTGTTCACCCCGCACCAGCCCAGACCATCCCAAAAATGATGGCAAGACGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR CCA 72 bp	TCCTCTAACACAATCACACCCTCCAGCAGTGTGATGTaGTCAACGATGGGGCCTTCAGGCTCCAAGCCAAGC	+
Preference number: 3 (lower is better) Translates to: SSNTITPSSSVM*STMGPSGSKPS Trigger: GCTTGGCTTGGAGCCTGAAGGCCCCATCGTTGACCACATCACACTGCTGGAGGGTGTGATTGTGTTAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR TCA 72 bp	CTGACAGAGTTTCTGGCTCCCTCTGTTCTCCGAGGATaGAGACCACCATTTCCTGAAGCAGGACGTCTGAGG	+
Preference number: 3 (lower is better) Translates to: LTEFLAPSVLRG*RPPFPEAGRLR Trigger: CCTCAGACGTCCTGCTTCAGGAAATGGTGGTCTTCATCCTCGGAGAACAGAGGGAGCCAGAAACTCTGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR TCA 72 bp	AGAACTCCTCTAACACAATCACACCCTCCAGCAGTGTaGTGTGGTCAACGATGGGGCCTTCAGGCTCCAAGC	+
Preference number: 3 (lower is better) Translates to: RTPLTQSHPPAV*CGQRWGLQAPS Trigger: GCTTGGAGCCTGAAGGCCCCATCGTTGACCACATCACACTGCTGGAGGGTGTGATTGTGTTAGAGGAGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR GCA 72 bp	AAGGCCGTCGAGGTCAGAATCCCCATCTCAGAGGTCTaGATCAGCTGGGGTTCCATGACACCAACAAAGAAC	+
Preference number: 3 (lower is better) Translates to: KAVEVRIPISEV*ISWGSMTPTKN Trigger: GTTCTTTGTTGGTGTCATGGAACCCCAGCTGATGCAGACCTCTGAGATGGGGATTCTGACCTCGACGGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR CCA 72 bp	GCTGCTACGCACCCAGCTCCTCCTCCAGACTCTCGATaGTTCCTCAGCGACGACGTTTTTCCTCATTTAGTT	+
Preference number: 3 (lower is better) Translates to: AATHPAPPPDSR*FLSDDVFPHLV Trigger: AACTAAATGAGGAAAAACGTCGTCGCTGAGGAACCATCGAGAGTCTGGAGGAGGAGCTGGGTGCGTAGCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR CCA 72 bp	CTTCCGTCTTGCCATCATTTTTGGGATGGTCTGGGCTaGTGCGGGGTGAACAAATCCACTCTTGGTTGGGCA	+
Preference number: 3 (lower is better) Translates to: LPSCHHFWDGLG*CGVNKSTLGWA Trigger: TGCCCAACCAAGAGTGGATTTGTTCACCCCGCACCAGCCCAGACCATCCCAAAAATGATGGCAAGACGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR-3UTR CAA 90 bp	ACAAGATGTCCGTGTGTCCTGCAGCTGTACCCTGCACCTTGGCTAACCAAGACACTGACATCACAAGCTTaGCAGCTTCTCGGTCACTGG	+
Preference number: 3 (lower is better) Translates to: TRCPCVLQLYPAPWLTKTLTSQA*QLLGHW Trigger: CCAGTGACCGAGAAGCTGCAAAGCTTGTGATGTCAG...TGTCTTGGTTAGCCAAGGTGCAGGGTACAGCTGCAGGACACACGGACATCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR TCA 72 bp	CAAAAGACTGAACCTAATAAAGAGAACAGTGAACACTaGGAGGCCCACTGCACGCCGACTGTCGCCCCAGAG	+
Preference number: 3 (lower is better) Translates to: QKTEPNKENSEH*EAHCTPTVAPE Trigger: CTCTGGGGCGACAGTCGGCGTGCAGTGGGCCTCTCAGTGTTCACTGTTCTCTTTATTAGGTTCAGTCTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR TCA 72 bp	TCCCCATCTCAGAGGTCTGCATCAGCTGGGGTTCCATaGCACCAACAAAGAACCTTTCGTGGATGGCTTTGG	+
Preference number: 3 (lower is better) Translates to: SPSQRSASAGVP*HQQRTFRGWLW Trigger: CCAAAGCCATCCACGAAAGGTTCTTTGTTGGTGTCATGGAACCCCAGCTGATGCAGACCTCTGAGATGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR TCA 72 bp	GCCATCATTTTTGGGATGGTCTGGGCTGGTGCGGGGTaGACAAATCCACTCTTGGTTGGGCAGAGTGTTATC	+
Preference number: 3 (lower is better) Translates to: AIIFGMVWAGAG*TNPLLVGQSVI Trigger: GATAACACTCTGCCCAACCAAGAGTGGATTTGTTCACCCCGCACCAGCCCAGACCATCCCAAAAATGATGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR TCA 72 bp	CGCTTTCTGACCAGGAGAAGCTTGGGGGTGAAGTCTTaGATGCGCTGGATTCGAACCATGAGGTCACCAACA	+
Preference number: 3 (lower is better) Translates to: RFLTRRSLGVKS*MRWIRTMRSPT Trigger: TGTTGGTGACCTCATGGTTCGAATCCAGCGCATTCAAGACTTCACCCCCAAGCTTCTCCTGGTCAGAAAGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR-3UTR CAA 90 bp	CAGGAGGCCGACAGAGTATCAGTGACAGTATTTTACAGGGCCCAGAAGAGGATTCTTTCGTGGATGGCTTaGGCGAGAGCAACAGCAGCA	+
Preference number: 3 (lower is better) Translates to: QEADRVSVTVFYRAQKRILSWMA*ARATAA Trigger: TGCTGCTGTTGCTCTCGCCAAAGCCATCCACGAAAG...AATCCTCTTCTGGGCCCTGTAAAATACTGTCACTGATACTCTGTCGGCCTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR TCA 72 bp	TATGGCAGAGCGAGAGGAAGCAACACCAGGCCTCACTaGGAGCAGTCACGCAGTGGATTCTTAACATTCTGT	+
Preference number: 3 (lower is better) Translates to: YGRARGSNTRPH*EQSRSGFLTFC Trigger: ACAGAATGTTAAGAATCCACTGCGTGACTGCTCTCAGTGAGGCCTGGTGTTGCTTCCTCTCGCTCTGCCATA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR TCA 72 bp	GCTTCTCGGTCACTGGAGACCCAGTCTCCTCAGGTCTaGTTGTTTCCTGGGTTTGAACAACGTGCAACCATA	+
Preference number: 3 (lower is better) Translates to: ASRSLETQSPQV*LFPGFEQRATI Trigger: TATGGTTGCACGTTGTTCAAACCCAGGAAACAATCAGACCTGAGGAGACTGGGTCTCCAGTGACCGAGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR CCA 72 bp	TTCCTGACATCACAAGCTTTGCAGCTTCTCGGTCACTaGAGACCCAGTCTCCTCAGGTCTGATTGTTTCCTG	+
Preference number: 3 (lower is better) Translates to: FLTSQALQLLGH*RPSLLRSDCFL Trigger: CAGGAAACAATCAGACCTGAGGAGACTGGGTCTCCAGTGACCGAGAAGCTGCAAAGCTTGTGATGTCAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR CCA 72 bp	AGCTGGGGTTCCATGACACCAACAAAGAACCTTTCGTaGATGGCTTTGGCGAGAGCAACAGCAGCAGTCTTT	+
Preference number: 3 (lower is better) Translates to: SWGSMTPTKNLS*MALARATAAVF Trigger: AAAGACTGCTGCTGTTGCTCTCGCCAAAGCCATCCACGAAAGGTTCTTTGTTGGTGTCATGGAACCCCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR CCA 72 bp	TGGTCTGGGCTGGTGCGGGGTGAACAAATCCACTCTTaGTTGGGCAGAGTGTTATCTGGTGAAATGTCAGTA	+
Preference number: 3 (lower is better) Translates to: WSGLVRGEQIHS*LGRVLSGEMSV Trigger: TACTGACATTTCACCAGATAACACTCTGCCCAACCAAGAGTGGATTTGTTCACCCCGCACCAGCCCAGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR-3UTR CAA 90 bp	CACCTCACTGGTAGCCCACAGAGCACTATGAGAACATTAACAAACACCTGTACCCTTGGGGGTGAAGTCTaGAATGCGCTGGATTCGAAC	+
Preference number: 3 (lower is better) Translates to: HLTGSPQSTMRTLTNTCTLGGEV*NALDSN Trigger: GTTCGAATCCAGCGCATTCAAGACTTCACCCCCAAG...GGTACAGGTGTTTGTTAATGTTCTCATAGTGCTCTGTGGGCTACCAGTGAGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR CCA 72 bp	ACTTTATGCACTTCCGTCTTGCCATCATTTTTGGGATaGTCTGGGCTGGTGCGGGGTGAACAAATCCACTCT	+
Preference number: 3 (lower is better) Translates to: TLCTSVLPSFLG*SGLVRGEQIHS Trigger: AGAGTGGATTTGTTCACCCCGCACCAGCCCAGACCATCCCAAAAATGATGGCAAGACGGAAGTGCATAAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR-3UTR CAA 90 bp	CAGGAGGCCGACAGAGTATCAGTGACAGTATTTTACAGGGCCCAGAAGAGGATTAGCTGTGGGGGATTCTaGCAGAAACTTGTCAATAAA	+
Preference number: 3 (lower is better) Translates to: QEADRVSVTVFYRAQKRISCGGF*QKLVNK Trigger: TTTATTGACAAGTTTCTGCAAGAATCCCCCACAGCT...AATCCTCTTCTGGGCCCTGTAAAATACTGTCACTGATACTCTGTCGGCCTCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR TCA 72 bp	AAAATCACCACCATCAAAGTCGACGGTAGCAACATCTaGAGGAGGAAGAGCTGTGGGGGATTCTTGCAGAAA	+
Preference number: 3 (lower is better) Translates to: KITTIKVDGSNI*RRKSCGGFLQK Trigger: TTTCTGCAAGAATCCCCCACAGCTCTTCCTCCTTCAGATGTTGCTACCGTCGACTTTGATGGTGGTGATTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR CCA 72 bp	GGTTTCTCAAGACCAGGTTGTAGAGGATGTGTTCATTaGGCTTTTGTAGGAGATGCTCAAACATCCTCAGGG	+
Preference number: 3 (lower is better) Translates to: GFSRPGCRGCVH*AFVGDAQTSSG Trigger: CCCTGAGGATGTTTGAGCATCTCCTACAAAAGCCCAATGAACACATCCTCTACAACCTGGTCTTGAGAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR-3UTR CAA 90 bp	CAGGAGGCCGACAGAGTATCAGTGACAGTATTTTACAGGGCCCAGAAGAGGATTGACTTAACGGATTTCTaGAAGGAACCGAGAAAGATT	+
Preference number: 3 (lower is better) Translates to: QEADRVSVTVFYRAQKRIDLTDF*KEPRKI Trigger: AATCTTTCTCGGTTCCTTCAAGAAATCCGTTAAGTC...AATCCTCTTCTGGGCCCTGTAAAATACTGTCACTGATACTCTGTCGGCCTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR TCA 72 bp	GCAGTCACGCAGTGGATTCTTAACATTCTGTGCAGTTaGCTCGATACTTCATTTGCAAGGCGTTTTAGCCTC	+
Preference number: 3 (lower is better) Translates to: AVTQWILNILCS*LDTSFARRFSL Trigger: GAGGCTAAAACGCCTTGCAAATGAAGTATCGAGTCAACTGCACAGAATGTTAAGAATCCACTGCGTGACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR GCA 72 bp	GCAACATCTGAAGGAGGAAGAGCTGTGGGGGATTCTTaGAGAAACTTGTCAATAAATACAACAGAGGGAACC	+
Preference number: 3 (lower is better) Translates to: ATSEGGRAVGDS*RNLSINTTEGT Trigger: GGTTCCCTCTGTTGTATTTATTGACAAGTTTCTGCAAGAATCCCCCACAGCTCTTCCTCCTTCAGATGTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR CCA 72 bp	GAATTAAACTTAGATGAGAAACAGGCTAACCTGAGCTaGCTGCAGGGCAGGTCATTAGGACAACTTGGGAAA	+
Preference number: 3 (lower is better) Translates to: ELNLDEKQANLS*LQGRSLGQLGK Trigger: TTTCCCAAGTTGTCCTAATGACCTGCCCTGCAGCCAGCTCAGGTTAGCCTGTTTCTCATCTAAGTTTAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR CCA 72 bp	CAGGCTGGAACTCAGTCTGACAACCACTTGCTAAGGTaGTACTTTCCACTCAACACAGTCTATGGAAGAAAT	+
Preference number: 3 (lower is better) Translates to: QAGTQSDNHLLR*YFPLNTVYGRN Trigger: ATTTCTTCCATAGACTGTGTTGAGTGGAAAGTACCACCTTAGCAAGTGGTTGTCAGACTGAGTTCCAGCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR TCA 72 bp	AGCACTGAGGTCACCTGCAGATTCACATCGTACGGCTaGTCGAGAATTCTTCCCATTCTGTCAAATAAAACT	+
Preference number: 3 (lower is better) Translates to: STEVTCRFTSYG*SRILPILSNKT Trigger: AGTTTTATTTGACAGAATGGGAAGAATTCTCGATCAGCCGTACGATGTGAATCTGCAGGTGACCTCAGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR TCA 72 bp	AGGATATTAAAAGAACAAAAATGCCAGCCAAGTTCCTaGCATCACAAGCTTTGCAGCTTCTCGGTCACTGGA	+
Preference number: 3 (lower is better) Translates to: RILKEQKCQPSS*HHKLCSFSVTG Trigger: TCCAGTGACCGAGAAGCTGCAAAGCTTGTGATGTCAGGAACTTGGCTGGCATTTTTGTTCTTTTAATATCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR GCA 72 bp	GTACTTTCCACTCAACACAGTCTATGGAAGAAATCCTaGAGTCTCGGAGACTGTGAGAAAAATCTTAGGTGT	+
Preference number: 3 (lower is better) Translates to: VLSTQHSLWKKS*SLGDCEKNLRC Trigger: ACACCTAAGATTTTTCTCACAGTCTCCGAGACTGCAGGATTTCTTCCATAGACTGTGTTGAGTGGAAAGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR TCA 72 bp	TTTAAATCAACTCAAACCCAGCTCCGTGACTTGTGCTaGCTCTGGGTCTGGATTAGATATGAGAAAGGAATT	+
Preference number: 3 (lower is better) Translates to: FKSTQTQLRDLC*LWVWIRYEKGI Trigger: AATTCCTTTCTCATATCTAATCCAGACCCAGAGTCAGCACAAGTCACGGAGCTGGGTTTGAGTTGATTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR TCA 72 bp	ATCCTCAGGGTCATGATGCTGATCTCATCAGATATGTaGTCGCAATGTTCGATTAACCTATGTCTTAGAGGA	+
Preference number: 3 (lower is better) Translates to: ILRVMMLISSDM*SQCSINLCLRG Trigger: TCCTCTAAGACATAGGTTAATCGAACATTGCGATCACATATCTGATGAGATCAGCATCATGACCCTGAGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR GCA 72 bp	ACTATGAGAACATTAACAAACACCTGTACCTCTCAATaGCTTATCTCAAAATCACCACCATCAAAGTCGACG	+
Preference number: 3 (lower is better) Translates to: TMRTLTNTCTSQ*LISKSPPSKST Trigger: CGTCGACTTTGATGGTGGTGATTTTGAGATAAGGCATTGAGAGGTACAGGTGTTTGTTAATGTTCTCATAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR CCA 72 bp	ATTACTGAAAAGAAACCAGACTACATTGTTAGAAAGTaGGGAAACAATGTGCATGCTTATTTCCTGTTTCTA	+
Preference number: 3 (lower is better) Translates to: ITEKKPDYIVRK*GNNVHAYFLFL Trigger: TAGAAACAGGAAATAAGCATGCACATTGTTTCCCCACTTTCTAACAATGTAGTCTGGTTTCTTTTCAGTAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR TCA 90 bp	CCACCTGCCCGGAGGGGACGGTGGGCACACAGTCACCCGAAGAGCTTCCTCATCCCTTGTACAGGGAGGTaGGTCTGCCGGTCAGCAGCT	+
Preference number: 4 (lower is better) Translates to: PPARRGRWAHSHPKSFLIPCTGR*VCRSAA Trigger: AGCTGCTGACCGGCAGACTCACCTCCCTGTACAAGG...GATGAGGAAGCTCTTCGGGTGACTGTGTGCCCACCGTCCCCTCCGGGCAGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR CCA 90 bp	CCACCTGCCCGGAGGGGACGGTGGGCACACAGTCACCCGAAGAGCTTCCTCATCTCTGAGCAAGGCACTTaGCAGCCGCAGGCTCCGGTA	+
Preference number: 4 (lower is better) Translates to: PPARRGRWAHSHPKSFLISEQGT*QPQAPV Trigger: TACCGGAGCCTGCGGCTGCCAAGTGCCTTGCTCAGA...GATGAGGAAGCTCTTCGGGTGACTGTGTGCCCACCGTCCCCTCCGGGCAGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR GCA 90 bp	GGAGTCGATGCTGCTACGCACCCAGCTCCTCCTCCAGACTCTCGATGGTTCCTCTGCCGGACGATGCGGTaGAGCAAGGCCGTCGAGGTC	+
Preference number: 4 (lower is better) Translates to: GVDAATHPAPPPDSRWFLCRTMR*SKAVEV Trigger: GACCTCGACGGCCTTGCTGCACCGCATCGTCCGGCA...GAGGAACCATCGAGAGTCTGGAGGAGGAGCTGGGTGCGTAGCAGCATCGACTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR TCA 90 bp	GGAGTCGATGCTGCTACGCACCCAGCTCCTCCTCCAGACTCTCGATGGTTCCTCCTGGCTGACGTCTCCTaGCCCCGGGTCCTGACCTTT	+
Preference number: 4 (lower is better) Translates to: GVDAATHPAPPPDSRWFLLADVS*PRVLTF Trigger: AAAGGTCAGGACCCGGGGTCAGGAGACGTCAGCCAG...GAGGAACCATCGAGAGTCTGGAGGAGGAGCTGGGTGCGTAGCAGCATCGACTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
3UTR CAA 72 bp	TATCGTCGGGAGCAGCAAACACGCAGGGGAGAAGCTTaGCCGAGCTCATGGCGTGGGCGCCATAGGTCCAGC	+
Preference number: 4 (lower is better) Translates to: YRREQQTRRGEA*PSSWRGRHRSS Trigger: GCTGGACCTATGGCGCCCACGCCATGAGCTCGGCAAAGCTTCTCCCCTGCGTGTTTGCTGCTCCCGACGATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR TCA 90 bp	CCCCAGAGCCAGGTCCTGCTAACACTGCCACACACGTCAGTACGGAAGTCAACCCACAGGCAGGTGCTCTaGGCAAGGCACTTGGCAGCC	+
Preference number: 4 (lower is better) Translates to: PQSQVLLTLPHTSVRKSTHRQVL*ARHLAA Trigger: GGCTGCCAAGTGCCTTGCTCAGAGCACCTGCCTGTG...GGTTGACTTCCGTACTGACGTGTGTGGCAGTGTTAGCAGGACCTGGCTCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR GCA 90 bp	GGAGTCGATGCTGCTACGCACCCAGCTCCTCCTCCAGACTCTCGATGGTTCCTCAGCGCCTCCACGGCATaGTGCAGGATGGACGTAAGC	+
Preference number: 4 (lower is better) Translates to: GVDAATHPAPPPDSRWFLSASTA*CRMDVS Trigger: GCTTACGTCCATCCTGCAGCATGCCGTGGAGGCGCT...GAGGAACCATCGAGAGTCTGGAGGAGGAGCTGGGTGCGTAGCAGCATCGACTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR CCA 90 bp	CAAAAGCTGAAGGAGTCGATGCTGCTACGCACCCAGCTCCTCCTCCAGACTCTCTGGGGCTGCTGGCACTaGCTGACGTCTCCTGACCCC	+
Preference number: 4 (lower is better) Translates to: QKLKESMLLRTQLLLQTLWGCWH*LTSPDP Trigger: GGGGTCAGGAGACGTCAGCCAGTGCCAGCAGCCCCA...GAGAGTCTGGAGGAGGAGCTGGGTGCGTAGCAGCATCGACTCCTTCAGCTTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR CCA 90 bp	CCACCTGCCCGGAGGGGACGGTGGGCACACAGTCACCCGAAGAGCTTCCTCATCGGCGTGGCGGAAGCGTaGTACTTAACAAAGGCAATG	+
Preference number: 4 (lower is better) Translates to: PPARRGRWAHSHPKSFLIGVAEA*YLTKAM Trigger: CATTGCCTTTGTTAAGTACCACGCTTCCGCCACGCC...GATGAGGAAGCTCTTCGGGTGACTGTGTGCCCACCGTCCCCTCCGGGCAGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR GCA 90 bp	GGCACACAGTCACCCGAAGAGCTTCCTCATCGGTGGCCTGGGAATCCAGACCTTAGCGCCTCCACGGCATaGTGCAGGATGGACGTAAGC	+
Preference number: 4 (lower is better) Translates to: GTQSPEELPHRWPGNPDLSASTA*CRMDVS Trigger: GCTTACGTCCATCCTGCAGCATGCCGTGGAGGCGCT...AAGGTCTGGATTCCCAGGCCACCGATGAGGAAGCTCTTCGGGTGACTGTGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR CCA 90 bp	GGGCTGCTTAACGCTTCAATAAGGACGAGGACAGGAGCTCCAGAACCACAGCCAGCACCTGACAGCTCCTaGGGCTGCTGGCACTGGCTG	+
Preference number: 4 (lower is better) Translates to: GLLNASIRTRTGAPEPQPAPDSS*GCWHWL Trigger: CAGCCAGTGCCAGCAGCCCCAGGAGCTGTCAGGTGC...TGGCTGTGGTTCTGGAGCTCCTGTCCTCGTCCTTATTGAAGCGTTAAGCAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR GCA 90 bp	CCCCAGAGCCAGGTCCTGCTAACACTGCCACACACGTCAGTACGGAAGTCAACCGCCTCCACGGCATGCTaGAGGATGGACGTAAGCTTG	+
Preference number: 4 (lower is better) Translates to: PQSQVLLTLPHTSVRKSTASTAC*RMDVSL Trigger: CAAGCTTACGTCCATCCTGCAGCATGCCGTGGAGGC...GGTTGACTTCCGTACTGACGTGTGTGGCAGTGTTAGCAGGACCTGGCTCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR CCA 90 bp	GGGCTGCTTAACGCTTCAATAAGGACGAGGACAGGAGCTCCAGAACCACAGCCAAGCTCCTGGGGCTGCTaGCACTGGCTGACGTCTCCT	+
Preference number: 4 (lower is better) Translates to: GLLNASIRTRTGAPEPQPSSWGC*HWLTSP Trigger: AGGAGACGTCAGCCAGTGCCAGCAGCCCCAGGAGCT...TGGCTGTGGTTCTGGAGCTCCTGTCCTCGTCCTTATTGAAGCGTTAAGCAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR TCA 90 bp	GGAGTCGATGCTGCTACGCACCCAGCTCCTCCTCCAGACTCTCGATGGTTCCTCTTTTGGGCCATCCTCTaGGATGACACTCAGAGCTCC	+
Preference number: 4 (lower is better) Translates to: GVDAATHPAPPPDSRWFLFWAIL*DDTQSS Trigger: GGAGCTCTGAGTGTCATCTCAGAGGATGGCCCAAAA...GAGGAACCATCGAGAGTCTGGAGGAGGAGCTGGGTGCGTAGCAGCATCGACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR TCA 90 bp	GGGCTGCTTAACGCTTCAATAAGGACGAGGACAGGAGCTCCAGAACCACAGCCATCGTGCGTGTGTGGGTaGGGGAACAGCGAGAGTCTG	+
Preference number: 4 (lower is better) Translates to: GLLNASIRTRTGAPEPQPSCVCG*GNSESL Trigger: CAGACTCTCGCTGTTCCCTCACCCACACACGCACGA...TGGCTGTGGTTCTGGAGCTCCTGTCCTCGTCCTTATTGAAGCGTTAAGCAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR GCA 90 bp	ACAAGATGTCCGTGTGTCCTGCAGCTGTACCCTGCACCTTGGCTAACCAAGACAGACAGCTCCTGGGGCTaGTGGCACTGGCTGACGTCT	+
Preference number: 4 (lower is better) Translates to: TRCPCVLQLYPAPWLTKTDSSWG*WHWLTS Trigger: AGACGTCAGCCAGTGCCAGCAGCCCCAGGAGCTGTC...TGTCTTGGTTAGCCAAGGTGCAGGGTACAGCTGCAGGACACACGGACATCTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR TCA 90 bp	CACCTCACTGGTAGCCCACAGAGCACTATGAGAACATTAACAAACACCTGTACCGCTGCTGGCACTGGCTaGCGTCTCCTGACCCCGGGT	+
Preference number: 4 (lower is better) Translates to: HLTGSPQSTMRTLTNTCTAAGTG*RLLTPG Trigger: ACCCGGGGTCAGGAGACGTCAGCCAGTGCCAGCAGC...GGTACAGGTGTTTGTTAATGTTCTCATAGTGCTCTGTGGGCTACCAGTGAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR TCA 90 bp	AGACTAGACAGACAAGGGAACAAGATGTCCGTGTGTCCTGCAGCTGTACCCTGCCACCCTCCAGCAGTGTaGTGTGGTCAACGATGGGGC	+
Preference number: 4 (lower is better) Translates to: RLDRQGNKMSVCPAAVPCHPPAV*CGQRWG Trigger: GCCCCATCGTTGACCACATCACACTGCTGGAGGGTG...GCAGGGTACAGCTGCAGGACACACGGACATCTTGTTCCCTTGTCTGTCTAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR GCA 90 bp	GGAGTCGATGCTGCTACGCACCCAGCTCCTCCTCCAGACTCTCGATGGTTCCTCAACACCAAAACCTGCTaGTTCATTCCTGGAGGGCAG	+
Preference number: 4 (lower is better) Translates to: GVDAATHPAPPPDSRWFLNTKTC*FIPGGQ Trigger: CTGCCCTCCAGGAATGAAGCAGCAGGTTTTGGTGTT...GAGGAACCATCGAGAGTCTGGAGGAGGAGCTGGGTGCGTAGCAGCATCGACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR GCA 90 bp	CCACCTGCCCGGAGGGGACGGTGGGCACACAGTCACCCGAAGAGCTTCCTCATCATCCTGTTTCAGCTTTaGACACACGATGCAGAGAAA	+
Preference number: 4 (lower is better) Translates to: PPARRGRWAHSHPKSFLIILFQL*THDAEK Trigger: TTTCTCTGCATCGTGTGTGCAAAGCTGAAACAGGAT...GATGAGGAAGCTCTTCGGGTGACTGTGTGCCCACCGTCCCCTCCGGGCAGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR CCA 90 bp	AAGGGAACAAGATGTCCGTGTGTCCTGCAGCTGTACCCTGCACCTTGGCTAACCGTCACACTTCTCCAGTaGTTTGGGGGCTCCTGGCCA	+
Preference number: 4 (lower is better) Translates to: KGTRCPCVLQLYPAPWLTVTLLQ*FGGSWP Trigger: TGGCCAGGAGCCCCCAAACCACTGGAGAAGTGTGAC...GGTTAGCCAAGGTGCAGGGTACAGCTGCAGGACACACGGACATCTTGTTCCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
3UTR CAA 72 bp	AAGATGTCCGTGTGTCCTGCAGCTGTACCCTGCACCTaGGCTAACCAAGACATCCCTGCATCGGCACCACTC	+
Preference number: 4 (lower is better) Translates to: KMSVCPAAVPCT*ANQDIPASAPL Trigger: GAGTGGTGCCGATGCAGGGATGTCTTGGTTAGCCAAGGTGCAGGGTACAGCTGCAGGACACACGGACATCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR TCA 90 bp	ACAAGATGTCCGTGTGTCCTGCAGCTGTACCCTGCACCTTGGCTAACCAAGACAGGCCATCCTCTGAGATaGCACTCAGAGCTCCTCTGG	+
Preference number: 4 (lower is better) Translates to: TRCPCVLQLYPAPWLTKTGHPLR*HSELLW Trigger: CCAGAGGAGCTCTGAGTGTCATCTCAGAGGATGGCC...TGTCTTGGTTAGCCAAGGTGCAGGGTACAGCTGCAGGACACACGGACATCTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR TCA 90 bp	ACAAAAATGCCAGCCAAGTTCCTGACATCACAAGCTTTGCAGCTTCTCGGTCACCACCCCAGTAGCACCTaGCAGCTCCTGGGGCTGCTG	+
Preference number: 4 (lower is better) Translates to: TKMPAKFLTSQALQLLGHHPSST*QLLGLL Trigger: CAGCAGCCCCAGGAGCTGTCAGGTGCTACTGGGGTG...GTGACCGAGAAGCTGCAAAGCTTGTGATGTCAGGAACTTGGCTGGCATTTTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR CCA 90 bp	AAGGGAACAAGATGTCCGTGTGTCCTGCAGCTGTACCCTGCACCTTGGCTAACCGTGTACGTTGATGTGTaGAAGCAGGGGCTGCCGGAT	+
Preference number: 4 (lower is better) Translates to: KGTRCPCVLQLYPAPWLTVYVDV*KQGLPD Trigger: ATCCGGCAGCCCCTGCTTCCACACATCAACGTACAC...GGTTAGCCAAGGTGCAGGGTACAGCTGCAGGACACACGGACATCTTGTTCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR TCA 90 bp	AGGACGTCTGAGGTCACTTGCCGGACGATGCGGTGCAGCAAGGCCGTCGAGGTCTGGGGCTTTATCATCTaGAGTTTCTATGTAGTAGTG	+
Preference number: 4 (lower is better) Translates to: RTSEVTCRTMRCSKAVEVWGFII*SFYVVV Trigger: CACTACTACATAGAAACTTCAGATGATAAAGCCCCA...GACCTCGACGGCCTTGCTGCACCGCATCGTCCGGCAAGTGACCTCAGACGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
CDS-3UTR TCA 90 bp	CTTTGCAGCTTCTCGGTCACTGGAGACCCAGTCTCCTCAGGTCTGATTGTTTCCAAGGGGTCCACTGACTaGGGTAGAGCCTTGTACAGG	+
Preference number: 4 (lower is better) Translates to: LCSFSVTGDPVSSGLIVSKGSTD*GRALYR Trigger: CCTGTACAAGGCTCTACCTCAGTCAGTGGACCCCTT...GGAAACAATCAGACCTGAGGAGACTGGGTCTCCAGTGACCGAGAAGCTGCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR TCA 90 bp	ACAAGATGTCCGTGTGTCCTGCAGCTGTACCCTGCACCTTGGCTAACCAAGACATGGCCACTCCCATCGTaGGCAGATAGCACAGTAGTC	+
Preference number: 4 (lower is better) Translates to: TRCPCVLQLYPAPWLTKTWPLPS*ADSTVV Trigger: GACTACTGTGCTATCTGCTCACGATGGGAGTGGCCA...TGTCTTGGTTAGCCAAGGTGCAGGGTACAGCTGCAGGACACACGGACATCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR TCA 90 bp	CAGGAGGCCGACAGAGTATCAGTGACAGTATTTTACAGGGCCCAGAAGAGGATTCAAGCAGCCGCTTTCTaGCCAGGAGAAGCTTGGGGG	+
Preference number: 4 (lower is better) Translates to: QEADRVSVTVFYRAQKRIQAAAF*PGEAWG Trigger: CCCCCAAGCTTCTCCTGGTCAGAAAGCGGCTGCTTG...AATCCTCTTCTGGGCCCTGTAAAATACTGTCACTGATACTCTGTCGGCCTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR GCA 90 bp	AAGGGAACAAGATGTCCGTGTGTCCTGCAGCTGTACCCTGCACCTTGGCTAACCATTCTCCGTTGGCGTTaGAAGGACCTCACCACAGAG	+
Preference number: 4 (lower is better) Translates to: KGTRCPCVLQLYPAPWLTILRWR*KDLTTE Trigger: CTCTGTGGTGAGGTCCTTGCAACGCCAACGGAGAAT...GGTTAGCCAAGGTGCAGGGTACAGCTGCAGGACACACGGACATCTTGTTCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR GCA 90 bp	CAAAAGCTGAAGGAGTCGATGCTGCTACGCACCCAGCTCCTCCTCCAGACTCTCCAACCCCCAGTTAACTaGCTCCACGGTTTCAATGTC	+
Preference number: 4 (lower is better) Translates to: QKLKESMLLRTQLLLQTLQPPVN*LHGFNV Trigger: GACATTGAAACCGTGGAGGCAGTTAACTGGGGGTTG...GAGAGTCTGGAGGAGGAGCTGGGTGCGTAGCAGCATCGACTCCTTCAGCTTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR CCA 90 bp	CAGGAGGCCGACAGAGTATCAGTGACAGTATTTTACAGGGCCCAGAAGAGGATTGTTGTAGTCCTGGTTTaGCCGGACGGCAGAGGCCTC	+
Preference number: 4 (lower is better) Translates to: QEADRVSVTVFYRAQKRIVVVLV*PDGRGL Trigger: GAGGCCTCTGCCGTCCGGCCAAACCAGGACTACAAC...AATCCTCTTCTGGGCCCTGTAAAATACTGTCACTGATACTCTGTCGGCCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR CCA 90 bp	GGGCTGCTTAACGCTTCAATAAGGACGAGGACAGGAGCTCCAGAACCACAGCCATTTCGTGGATGGCTTTaGCGAGAGCAACAGCAGCAG	+
Preference number: 4 (lower is better) Translates to: GLLNASIRTRTGAPEPQPFRGWL*REQQQQ Trigger: CTGCTGCTGTTGCTCTCGCCAAAGCCATCCACGAAA...TGGCTGTGGTTCTGGAGCTCCTGTCCTCGTCCTTATTGAAGCGTTAAGCAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR CCA 90 bp	CAGGAGGCCGACAGAGTATCAGTGACAGTATTTTACAGGGCCCAGAAGAGGATTACTTCTCCAGTGGTTTaGGGGCTCCTGGCCACTCCC	+
Preference number: 4 (lower is better) Translates to: QEADRVSVTVFYRAQKRITSPVV*GLLATP Trigger: GGGAGTGGCCAGGAGCCCCCAAACCACTGGAGAAGT...AATCCTCTTCTGGGCCCTGTAAAATACTGTCACTGATACTCTGTCGGCCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
3UTR CAA 72 bp	CCGCTTTCTGACCAGGAGAAGCTTGGGGGTGAAGTCTaGAATGCGCTGGATTCGAACCATGAGGTCACCAAC	+
Preference number: 4 (lower is better) Translates to: PLSDQEKLGGEV*NALDSNHEVTN Trigger: GTTGGTGACCTCATGGTTCGAATCCAGCGCATTCAAGACTTCACCCCCAAGCTTCTCCTGGTCAGAAAGCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
CDS-3UTR TCA 90 bp	GGCACACAGTCACCCGAAGAGCTTCCTCATCGGTGGCCTGGGAATCCAGACCTTGTTTCCAAGATCTTGTaGTGGAGCAGGTATTCCATG	+
Preference number: 4 (lower is better) Translates to: GTQSPEELPHRWPGNPDLVSKIL*WSRYSM Trigger: CATGGAATACCTGCTCCATCACAAGATCTTGGAAAC...AAGGTCTGGATTCCCAGGCCACCGATGAGGAAGCTCTTCGGGTGACTGTGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR TCA 90 bp	CCACCATTTCCTGAAGCAGGACGTCTGAGGTCACTTGCCGGACGATGCGGTGCAGTTTCCAAGATCTTGTaGTGGAGCAGGTATTCCATG	+
Preference number: 4 (lower is better) Translates to: PPFPEAGRLRSLAGRCGAVSKIL*WSRYSM Trigger: CATGGAATACCTGCTCCATCACAAGATCTTGGAAAC...TGCACCGCATCGTCCGGCAAGTGACCTCAGACGTCCTGCTTCAGGAAATGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
CDS-3UTR TCA 90 bp	GGCACACAGTCACCCGAAGAGCTTCCTCATCGGTGGCCTGGGAATCCAGACCTTTCTCCAGGAAAAAGTTaGCCAAGTAGGGATCCTGTT	+
Preference number: 4 (lower is better) Translates to: GTQSPEELPHRWPGNPDLSPGKS*PSRDPV Trigger: AACAGGATCCCTACTTGGTCAACTTTTTCCTGGAGA...AAGGTCTGGATTCCCAGGCCACCGATGAGGAAGCTCTTCGGGTGACTGTGTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR GCA 90 bp	TGCGGGGTGAACAAATCCACTCTTGGTTGGGCAGAGTGTTATCTGGTGAAATGTTGTGGAAGCAGGGGCTaGCGGATTCGTCCCAGAAGC	+
Preference number: 4 (lower is better) Translates to: CGVNKSTLGWAECYLVKCCGSRG*RIRPRS Trigger: GCTTCTGGGACGAATCCGGCAGCCCCTGCTTCCACA...ACATTTCACCAGATAACACTCTGCCCAACCAAGAGTGGATTTGTTCACCCCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
CDS-3UTR GCA 90 bp	ACAAGATGTCCGTGTGTCCTGCAGCTGTACCCTGCACCTTGGCTAACCAAGACAATTCTCCGTTGGCGTTaGAAGGACCTCACCACAGAG	+
Preference number: 4 (lower is better) Translates to: TRCPCVLQLYPAPWLTKTILRWR*KDLTTE Trigger: CTCTGTGGTGAGGTCCTTGCAACGCCAACGGAGAAT...TGTCTTGGTTAGCCAAGGTGCAGGGTACAGCTGCAGGACACACGGACATCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR CCA 90 bp	CAAAAGCTGAAGGAGTCGATGCTGCTACGCACCCAGCTCCTCCTCCAGACTCTCAACATCTGTTCCAGGTaGGATGGGATGTTTGTGTCG	+
Preference number: 4 (lower is better) Translates to: QKLKESMLLRTQLLLQTLNICSR*DGMFVS Trigger: CGACACAAACATCCCATCCCACCTGGAACAGATGTT...GAGAGTCTGGAGGAGGAGCTGGGTGCGTAGCAGCATCGACTCCTTCAGCTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR CCA 90 bp	GGAGTCGATGCTGCTACGCACCCAGCTCCTCCTCCAGACTCTCGATGGTTCCTCCGCTCATTTTCTTCTTaGACCAGGATGTCTAACATC	+
Preference number: 4 (lower is better) Translates to: GVDAATHPAPPPDSRWFLRSFSS*TRMSNI Trigger: GATGTTAGACATCCTGGTCCAAGAAGAAAATGAGCG...GAGGAACCATCGAGAGTCTGGAGGAGGAGCTGGGTGCGTAGCAGCATCGACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR CCA 90 bp	ACAAGATGTCCGTGTGTCCTGCAGCTGTACCCTGCACCTTGGCTAACCAAGACACAGGTATTCCATGCATaGCCCTGTCTCTCCAGATTC	+
Preference number: 4 (lower is better) Translates to: TRCPCVLQLYPAPWLTKTQVFHA*PCLSRF Trigger: GAATCTGGAGAGACAGGGCCATGCATGGAATACCTG...TGTCTTGGTTAGCCAAGGTGCAGGGTACAGCTGCAGGACACACGGACATCTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR CCA 90 bp	TCGAACCATGAGGTCACCAACAACCCTGACAATCACAGAGAAGAGAGACCTGCAGTGTACGTTGATGTGTaGAAGCAGGGGCTGCCGGAT	+
Preference number: 4 (lower is better) Translates to: SNHEVTNNPDNHREERPAVYVDV*KQGLPD Trigger: ATCCGGCAGCCCCTGCTTCCACACATCAACGTACAC...TGCAGGTCTCTCTTCTCTGTGATTGTCAGGGTTGTTGGTGACCTCATGGTTCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
CDS-3UTR CCA 90 bp	GGGCTGCTTAACGCTTCAATAAGGACGAGGACAGGAGCTCCAGAACCACAGCCAACAAAGAACCTTTCGTaGATGGCTTTGGCGAGAGCA	+
Preference number: 4 (lower is better) Translates to: GLLNASIRTRTGAPEPQPTKNLS*MALARA Trigger: TGCTCTCGCCAAAGCCATCCACGAAAGGTTCTTTGT...TGGCTGTGGTTCTGGAGCTCCTGTCCTCGTCCTTATTGAAGCGTTAAGCAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR CCA 90 bp	CCCCAGAGCCAGGTCCTGCTAACACTGCCACACACGTCAGTACGGAAGTCAACCGAACAAATCCACTCTTaGTTGGGCAGAGTGTTATCT	+
Preference number: 4 (lower is better) Translates to: PQSQVLLTLPHTSVRKSTEQIHS*LGRVLS Trigger: AGATAACACTCTGCCCAACCAAGAGTGGATTTGTTC...GGTTGACTTCCGTACTGACGTGTGTGGCAGTGTTAGCAGGACCTGGCTCTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR TCA 90 bp	CCCCAGAGCCAGGTCCTGCTAACACTGCCACACACGTCAGTACGGAAGTCAACCTGGGGCTTTATCATCTaGAGTTTCTATGTAGTAGTG	+
Preference number: 4 (lower is better) Translates to: PQSQVLLTLPHTSVRKSTWGFII*SFYVVV Trigger: CACTACTACATAGAAACTTCAGATGATAAAGCCCCA...GGTTGACTTCCGTACTGACGTGTGTGGCAGTGTTAGCAGGACCTGGCTCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR TCA 90 bp	CTTTGCAGCTTCTCGGTCACTGGAGACCCAGTCTCCTCAGGTCTGATTGTTTCCTCAGCTGGGGTTCCATaGCACCAACAAAGAACCTTT	+
Preference number: 4 (lower is better) Translates to: LCSFSVTGDPVSSGLIVSSAGVP*HQQRTF Trigger: AAAGGTTCTTTGTTGGTGTCATGGAACCCCAGCTGA...GGAAACAATCAGACCTGAGGAGACTGGGTCTCCAGTGACCGAGAAGCTGCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR TCA 90 bp	AGACTAGACAGACAAGGGAACAAGATGTCCGTGTGTCCTGCAGCTGTACCCTGCCCTCCAGGAAAAAGTTaGCCAAGTAGGGATCCTGTT	+
Preference number: 4 (lower is better) Translates to: RLDRQGNKMSVCPAAVPCPPGKS*PSRDPV Trigger: AACAGGATCCCTACTTGGTCAACTTTTTCCTGGAGG...GCAGGGTACAGCTGCAGGACACACGGACATCTTGTTCCCTTGTCTGTCTAGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
CDS-3UTR GCA 90 bp	CACCTCACTGGTAGCCCACAGAGCACTATGAGAACATTAACAAACACCTGTACCCCCATCTCAGAGGTCTaGATCAGCTGGGGTTCCATG	+
Preference number: 4 (lower is better) Translates to: HLTGSPQSTMRTLTNTCTPISEV*ISWGSM Trigger: CATGGAACCCCAGCTGATGCAGACCTCTGAGATGGG...GGTACAGGTGTTTGTTAATGTTCTCATAGTGCTCTGTGGGCTACCAGTGAGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR CCA 90 bp	CAAAAGCTGAAGGAGTCGATGCTGCTACGCACCCAGCTCCTCCTCCAGACTCTCAGAGGATGTGTTCATTaGGCTTTTGTAGGAGATGCT	+
Preference number: 4 (lower is better) Translates to: QKLKESMLLRTQLLLQTLRGCVH*AFVGDA Trigger: AGCATCTCCTACAAAAGCCCAATGAACACATCCTCT...GAGAGTCTGGAGGAGGAGCTGGGTGCGTAGCAGCATCGACTCCTTCAGCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
3UTR CAA 72 bp	ACAAAAATGCCAGCCAAGTTCCTGACATCACAAGCTTaGCAGCTTCTCGGTCACTGGAGACCCAGTCTCCTC	+
Preference number: 4 (lower is better) Translates to: TKMPAKFLTSQA*QLLGHWRPSLL Trigger: GAGGAGACTGGGTCTCCAGTGACCGAGAAGCTGCAAAGCTTGTGATGTCAGGAACTTGGCTGGCATTTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR CAA 72 bp	TCCATGACACCAACAAAGAACCTTTCGTGGATGGCTTaGGCGAGAGCAACAGCAGCAGTCTTTTGTGCCTCC	+
Preference number: 4 (lower is better) Translates to: SMTPTKNLSWMA*ARATAAVFCAS Trigger: GGAGGCACAAAAGACTGCTGCTGTTGCTCTCGCCAAAGCCATCCACGAAAGGTTCTTTGTTGGTGTCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
CDS-3UTR TCA 90 bp	AGACTAGACAGACAAGGGAACAAGATGTCCGTGTGTCCTGCAGCTGTACCCTGCGGACACCAGGGACTTTaGTTTGTTCTCCAGGAAAAA	+
Preference number: 4 (lower is better) Translates to: RLDRQGNKMSVCPAAVPCGHQGL*FVLQEK Trigger: TTTTTCCTGGAGAACAAATCAAAGTCCCTGGTGTCC...GCAGGGTACAGCTGCAGGACACACGGACATCTTGTTCCCTTGTCTGTCTAGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR TCA 90 bp	CTTTGCAGCTTCTCGGTCACTGGAGACCCAGTCTCCTCAGGTCTGATTGTTTCCGACAGAGAAAACTGTTaGCCACTTTATGCACTTCCG	+
Preference number: 4 (lower is better) Translates to: LCSFSVTGDPVSSGLIVSDRENC*PLYALP Trigger: CGGAAGTGCATAAAGTGGTCAACAGTTTTCTCTGTC...GGAAACAATCAGACCTGAGGAGACTGGGTCTCCAGTGACCGAGAAGCTGCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR TCA 90 bp	CAGGAGGCCGACAGAGTATCAGTGACAGTATTTTACAGGGCCCAGAAGAGGATTGGTCACCAACAACCCTaGCAATCACAGAGAAGAGAG	+
Preference number: 4 (lower is better) Translates to: QEADRVSVTVFYRAQKRIGHQQP*QSQRRE Trigger: CTCTCTTCTCTGTGATTGTCAGGGTTGTTGGTGACC...AATCCTCTTCTGGGCCCTGTAAAATACTGTCACTGATACTCTGTCGGCCTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR GCA 90 bp	CCTGCAGATTCACATCGTACGGCTGATCGAGAATTCTTCCCATTCTGTCAAATAGCCTCCACGGCATGCTaGAGGATGGACGTAAGCTTG	+
Preference number: 4 (lower is better) Translates to: PADSHRTADREFFPFCQIASTAC*RMDVSL Trigger: CAAGCTTACGTCCATCCTGCAGCATGCCGTGGAGGC...TATTTGACAGAATGGGAAGAATTCTCGATCAGCCGTACGATGTGAATCTGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
CDS-3UTR GCA 90 bp	TCGAACCATGAGGTCACCAACAACCCTGACAATCACAGAGAAGAGAGACCTGCAAACACCAAAACCTGCTaGTTCATTCCTGGAGGGCAG	+
Preference number: 4 (lower is better) Translates to: SNHEVTNNPDNHREERPANTKTC*FIPGGQ Trigger: CTGCCCTCCAGGAATGAAGCAGCAGGTTTTGGTGTT...TGCAGGTCTCTCTTCTCTGTGATTGTCAGGGTTGTTGGTGACCTCATGGTTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
CDS-3UTR GCA 90 bp	TCAAAGAAGGCTGCTTCTAGGTCACACTTCTCCAGTGGTTTGGGGGCTCCTGGCAGTCGAATTAATTTCTaGACAGGCCTGTGTACGTTG	+
Preference number: 4 (lower is better) Translates to: SKKAASRSHFSSGLGAPGSRINF*TGLCTL Trigger: CAACGTACACAGGCCTGTGCAGAAATTAATTCGACT...GCCAGGAGCCCCCAAACCACTGGAGAAGTGTGACCTAGAAGCAGCCTTCTTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
3UTR CAA 72 bp	CAGAGAAAACTGTTGACCACTTTATGCACTTCCGTCTaGCCATCATTTTTGGGATGGTCTGGGCTGGTGCGG	+
Preference number: 4 (lower is better) Translates to: QRKLLTTLCTSV*PSFLGWSGLVR Trigger: CCGCACCAGCCCAGACCATCCCAAAAATGATGGCAAGACGGAAGTGCATAAAGTGGTCAACAGTTTTCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
CDS-3UTR TCA 90 bp	CAAAAGCTGAAGGAGTCGATGCTGCTACGCACCCAGCTCCTCCTCCAGACTCTCATCTCATCAGATATGTaGTCGCAATGTTCGATTAAC	+
Preference number: 4 (lower is better) Translates to: QKLKESMLLRTQLLLQTLISSDM*SQCSIN Trigger: GTTAATCGAACATTGCGATCACATATCTGATGAGAT...GAGAGTCTGGAGGAGGAGCTGGGTGCGTAGCAGCATCGACTCCTTCAGCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR GCA 90 bp	CTGCCACACACGTCAGTACGGAAGTCAACCATAAAGCAATTTCATAAAGCAATTTGTGGAAGCAGGGGCTaGCGGATTCGTCCCAGAAGC	+
Preference number: 4 (lower is better) Translates to: LPHTSVRKSTIKQFHKAICGSRG*RIRPRS Trigger: GCTTCTGGGACGAATCCGGCAGCCCCTGCTTCCACA...AATTGCTTTATGAAATTGCTTTATGGTTGACTTCCGTACTGACGTGTGTGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR GCA 90 bp	AGACTAGACAGACAAGGGAACAAGATGTCCGTGTGTCCTGCAGCTGTACCCTGCAGTCGAATTAATTTCTaGACAGGCCTGTGTACGTTG	+
Preference number: 4 (lower is better) Translates to: RLDRQGNKMSVCPAAVPCSRINF*TGLCTL Trigger: CAACGTACACAGGCCTGTGCAGAAATTAATTCGACT...GCAGGGTACAGCTGCAGGACACACGGACATCTTGTTCCCTTGTCTGTCTAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR CCA 90 bp	AGACTAGACAGACAAGGGAACAAGATGTCCGTGTGTCCTGCAGCTGTACCCTGCTTCGTCCCAGAAGCTTaGTATAGAACACCAAAACCT	+
Preference number: 4 (lower is better) Translates to: RLDRQGNKMSVCPAAVPCFVPEA*YRTPKP Trigger: AGGTTTTGGTGTTCTATACCAAGCTTCTGGGACGAA...GCAGGGTACAGCTGCAGGACACACGGACATCTTGTTCCCTTGTCTGTCTAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR CAA 72 bp	GAAGGAGGAAGAGCTGTGGGGGATTCTTGCAGAAACTaGTCAATAAATACAACAGAGGGAACCACTGCTCGC	+
Preference number: 4 (lower is better) Translates to: EGGRAVGDSCRN*SINTTEGTTAR Trigger: GCGAGCAGTGGTTCCCTCTGTTGTATTTATTGACAAGTTTCTGCAAGAATCCCCCACAGCTCTTCCTCCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
3UTR CAA 72 bp	TCTGGGCTGGTGCGGGGTGAACAAATCCACTCTTGGTaGGGCAGAGTGTTATCTGGTGAAATGTCAGTAAAT	+
Preference number: 4 (lower is better) Translates to: SGLVRGEQIHSW*GRVLSGEMSVN Trigger: ATTTACTGACATTTCACCAGATAACACTCTGCCCAACCAAGAGTGGATTTGTTCACCCCGCACCAGCCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
CDS-3UTR TCA 90 bp	CTGCCACACACGTCAGTACGGAAGTCAACCATAAAGCAATTTCATAAAGCAATTCAGGCCTGTGTACGTTaGTGTGTGGAAGCAGGGGCT	+
Preference number: 4 (lower is better) Translates to: LPHTSVRKSTIKQFHKAIQACVR*CVEAGA Trigger: AGCCCCTGCTTCCACACATCAACGTACACAGGCCTG...AATTGCTTTATGAAATTGCTTTATGGTTGACTTCCGTACTGACGTGTGTGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR TCA 90 bp	CTGCCACACACGTCAGTACGGAAGTCAACCATAAAGCAATTTCATAAAGCAATTGAGTCTGGACAGCACTaGGGTCACCTGCAGATTCAC	+
Preference number: 4 (lower is better) Translates to: LPHTSVRKSTIKQFHKAIESGQH*GHLQIH Trigger: GTGAATCTGCAGGTGACCTCAGTGCTGTCCAGACTC...AATTGCTTTATGAAATTGCTTTATGGTTGACTTCCGTACTGACGTGTGTGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR GCA 90 bp	CTGCCACACACGTCAGTACGGAAGTCAACCATAAAGCAATTTCATAAAGCAATTGGAGCAGGTATTCCATaGATGGCCCTGTCTCTCCAG	+
Preference number: 4 (lower is better) Translates to: LPHTSVRKSTIKQFHKAIGAGIP*MALSLQ Trigger: CTGGAGAGACAGGGCCATGCATGGAATACCTGCTCC...AATTGCTTTATGAAATTGCTTTATGGTTGACTTCCGTACTGACGTGTGTGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR CCA 90 bp	ACAAAAATGCCAGCCAAGTTCCTGACATCACAAGCTTTGCAGCTTCTCGGTCACAAATCCACTCTTGGTTaGGCAGAGTGTTATCTGGTG	+
Preference number: 4 (lower is better) Translates to: TKMPAKFLTSQALQLLGHKSTLG*AECYLV Trigger: CACCAGATAACACTCTGCCCAACCAAGAGTGGATTT...GTGACCGAGAAGCTGCAAAGCTTGTGATGTCAGGAACTTGGCTGGCATTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
3UTR CAA 72 bp	AACACAAAGCAGGCTGGAACTCAGTCTGACAACCACTaGCTAAGGTGGTACTTTCCACTCAACACAGTCTAT	+
Preference number: 4 (lower is better) Translates to: NTKQAGTQSDNH*LRWYFPLNTVY Trigger: ATAGACTGTGTTGAGTGGAAAGTACCACCTTAGCAAGTGGTTGTCAGACTGAGTTCCAGCCTGCTTTGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR GCA 90 bp	GTTTCTACAAACACAAAGCAGGCTGGAACTCAGTCTGACAACCACTTGCTAAGGATCCTGTTTCAGCTTTaGACACACGATGCAGAGAAA	+
Preference number: 4 (lower is better) Translates to: VSTNTKQAGTQSDNHLLRILFQL*THDAEK Trigger: TTTCTCTGCATCGTGTGTGCAAAGCTGAAACAGGAT...CCTTAGCAAGTGGTTGTCAGACTGAGTTCCAGCCTGCTTTGTGTTTGTAGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR CCA 90 bp	AAACATCCTCAGGGTCATGATGCTGATCTCATCAGATATGTGATCGCAATGTTCAACATCTGTTCCAGGTaGGATGGGATGTTTGTGTCG	+
Preference number: 4 (lower is better) Translates to: KHPQGHDADLIRYVIAMFNICSR*DGMFVS Trigger: CGACACAAACATCCCATCCCACCTGGAACAGATGTT...GAACATTGCGATCACATATCTGATGAGATCAGCATCATGACCCTGAGGATGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
CDS-3UTR CCA 90 bp	CTGCCACACACGTCAGTACGGAAGTCAACCATAAAGCAATTTCATAAAGCAATTGAAGCGTCTTCTTTATaGCTGTATGAGTCCAACCCC	+
Preference number: 4 (lower is better) Translates to: LPHTSVRKSTIKQFHKAIEASSL*LYESNP Trigger: GGGGTTGGACTCATACAGCCATAAAGAAGACGCTTC...AATTGCTTTATGAAATTGCTTTATGGTTGACTTCCGTACTGACGTGTGTGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
3UTR CAA 72 bp	TCCCACTCTGGTTCTCTTTCTGACTTAACGGATTTCTaGAAGGAACCGAGAAAGATTCCCATTGTGTTAGAA	+
Preference number: 4 (lower is better) Translates to: SHSGSLSDLTDF*KEPRKIPIVLE Trigger: TTCTAACACAATGGGAATCTTTCTCGGTTCCTTCAAGAAATCCGTTAAGTCAGAAAGAGAACCAGAGTGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR GCA 90 bp	CTGCCACACACGTCAGTACGGAAGTCAACCATAAAGCAATTTCATAAAGCAATTTATGCACTTCCGTCTTaGCATCATTTTTGGGATGGT	+
Preference number: 4 (lower is better) Translates to: LPHTSVRKSTIKQFHKAIYALPS*HHFWDG Trigger: ACCATCCCAAAAATGATGGCAAGACGGAAGTGCATA...AATTGCTTTATGAAATTGCTTTATGGTTGACTTCCGTACTGACGTGTGTGGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR CCA 90 bp	CTGCCACACACGTCAGTACGGAAGTCAACCATAAAGCAATTTCATAAAGCAATTCGCTCATTTTCTTCTTaGACCAGGATGTCTAACATC	+
Preference number: 4 (lower is better) Translates to: LPHTSVRKSTIKQFHKAIRSFSS*TRMSNI Trigger: GATGTTAGACATCCTGGTCCAAGAAGAAAATGAGCG...AATTGCTTTATGAAATTGCTTTATGGTTGACTTCCGTACTGACGTGTGTGGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR CCA 90 bp	GAAAGTGGGGAAACAATGTGCATGCTTATTTCCTGTTTCTACAAACACAAAGCATTCGTCCCAGAAGCTTaGTATAGAACACCAAAACCT	+
Preference number: 4 (lower is better) Translates to: ESGETMCMLISCFYKHKAFVPEA*YRTPKP Trigger: AGGTTTTGGTGTTCTATACCAAGCTTCTGGGACGAA...TGCTTTGTGTTTGTAGAAACAGGAAATAAGCATGCACATTGTTTCCCCACTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS TCA 90 bp	AGGGAGGTGAGTCTGCCGGTCAGCAGCTCGCACAGGCAGGTGCTCTaGGCAAGGCACTTGGCAGCCGCAGGCTCCGGTAGGCTCACCAAG	+
Preference number: 5 (lower is better) Translates to: REVSLPVSSSHRQVL*ARHLAAAGSGRLTK Trigger: CTTGGTGAGCCTACCGGAGCCTGCGGCTGCCAAGTGCCTTGCTCAGAGCACCTGCCTGTGCGAGCTGCTGACCGGCAGACTCACCTCCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR CAA 90 bp	CCACCTGCCCGGAGGGGACGGTGGGCACACAGTCACCCGAAGAGCTTCCTCATCGGTGGGATGGGATGTTaGTGTCGGTCACTGGGGCTT	+
Preference number: 5 (lower is better) Translates to: PPARRGRWAHSHPKSFLIGGMGC*CRSLGL Trigger: AAGCCCCAGTGACCGACACAAACATCCCATCCCACC...GATGAGGAAGCTCTTCGGGTGACTGTGTGCCCACCGTCCCCTCCGGGCAGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR CAA 90 bp	GGAGTCGATGCTGCTACGCACCCAGCTCCTCCTCCAGACTCTCGATGGTTCCTCACAGGCCTGTGTACGTaGATGTGTGGAAGCAGGGGC	+
Preference number: 5 (lower is better) Translates to: GVDAATHPAPPPDSRWFLTGLCT*MCGSRG Trigger: GCCCCTGCTTCCACACATCAACGTACACAGGCCTGT...GAGGAACCATCGAGAGTCTGGAGGAGGAGCTGGGTGCGTAGCAGCATCGACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR CAA 90 bp	CAAAAGCTGAAGGAGTCGATGCTGCTACGCACCCAGCTCCTCCTCCAGACTCTCCACTTCTCCAGTGGTTaGGGGGCTCCTGGCCACTCC	+
Preference number: 5 (lower is better) Translates to: QKLKESMLLRTQLLLQTLHFSSG*GAPGHS Trigger: GGAGTGGCCAGGAGCCCCCAAACCACTGGAGAAGTG...GAGAGTCTGGAGGAGGAGCTGGGTGCGTAGCAGCATCGACTCCTTCAGCTTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS TCA 90 bp	TGTCTAAGGGGTCCACTGACTGAGGTAGAGCCTTGTACAGGGAGGTaGGTCTGCCGGTCAGCAGCTCGCACAGGCAGGTGCTCTGAGCAA	+
Preference number: 5 (lower is better) Translates to: CLRGPLTEVEPCTGR*VCRSAARTGRCSEQ Trigger: TTGCTCAGAGCACCTGCCTGTGCGAGCTGCTGACCGGCAGACTCACCTCCCTGTACAAGGCTCTACCTCAGTCAGTGGACCCCTTAGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR CAA 90 bp	GGAGTCGATGCTGCTACGCACCCAGCTCCTCCTCCAGACTCTCGATGGTTCCTCCTTGGGGGTGAAGTCTaGAATGCGCTGGATTCGAAC	+
Preference number: 5 (lower is better) Translates to: GVDAATHPAPPPDSRWFLLGGEV*NALDSN Trigger: GTTCGAATCCAGCGCATTCAAGACTTCACCCCCAAG...GAGGAACCATCGAGAGTCTGGAGGAGGAGCTGGGTGCGTAGCAGCATCGACTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR CAA 90 bp	GGGCTGCTTAACGCTTCAATAAGGACGAGGACAGGAGCTCCAGAACCACAGCCAGGTGGGATGGGATGTTaGTGTCGGTCACTGGGGCTT	+
Preference number: 5 (lower is better) Translates to: GLLNASIRTRTGAPEPQPGGMGC*CRSLGL Trigger: AAGCCCCAGTGACCGACACAAACATCCCATCCCACC...TGGCTGTGGTTCTGGAGCTCCTGTCCTCGTCCTTATTGAAGCGTTAAGCAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS TCA 90 bp	CGTCTCCTGACCCCGGGTCCTGACCTTTTGGGCCATCCTCTGAGATaGCACTCAGAGCTCCTCTGGACACCAGGGACTTTGATTTGTTCT	+
Preference number: 5 (lower is better) Translates to: RLLTPGPDLLGHPLR*HSELLWTPGTLICS Trigger: AGAACAAATCAAAGTCCCTGGTGTCCAGAGGAGCTCTGAGTGTCATCTCAGAGGATGGCCCAAAAGGTCAGGACCCGGGGTCAGGAGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS TCA 90 bp	CAGTTAACTGCCTCCACGGTTTCAATGTCTAAGGGGTCCACTGACTaGGGTAGAGCCTTGTACAGGGAGGTGAGTCTGCCGGTCAGCAGC	+
Preference number: 5 (lower is better) Translates to: QLTASTVSMSKGSTD*GRALYREVSLPVSS Trigger: GCTGCTGACCGGCAGACTCACCTCCCTGTACAAGGCTCTACCTCAGTCAGTGGACCCCTTAGACATTGAAACCGTGGAGGCAGTTAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR CAA 90 bp	CCCCAGAGCCAGGTCCTGCTAACACTGCCACACACGTCAGTACGGAAGTCAACCGATCCTGTTTCAGCTTaGCACACACGATGCAGAGAA	+
Preference number: 5 (lower is better) Translates to: PQSQVLLTLPHTSVRKSTDPVSA*HTRCRE Trigger: TTCTCTGCATCGTGTGTGCAAAGCTGAAACAGGATC...GGTTGACTTCCGTACTGACGTGTGTGGCAGTGTTAGCAGGACCTGGCTCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR CAA 90 bp	AGACTAGACAGACAAGGGAACAAGATGTCCGTGTGTCCTGCAGCTGTACCCTGCCTTTCGTGGATGGCTTaGGCGAGAGCAACAGCAGCA	+
Preference number: 5 (lower is better) Translates to: RLDRQGNKMSVCPAAVPCLSWMA*ARATAA Trigger: TGCTGCTGTTGCTCTCGCCAAAGCCATCCACGAAAG...GCAGGGTACAGCTGCAGGACACACGGACATCTTGTTCCCTTGTCTGTCTAGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR CAA 90 bp	CTTTGCAGCTTCTCGGTCACTGGAGACCCAGTCTCCTCAGGTCTGATTGTTTCCCGTGGTAGGAGGACTTaGCGTCATCTGGCACTAGAC	+
Preference number: 5 (lower is better) Translates to: LCSFSVTGDPVSSGLIVSRGRRT*RHLALD Trigger: GTCTAGTGCCAGATGACGCAAAGTCCTCCTACCACG...GGAAACAATCAGACCTGAGGAGACTGGGTCTCCAGTGACCGAGAAGCTGCAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS TCA 90 bp	GGGCAGTCGGCTTTCCCTAAGGTGTATAACGTTTCCAAGATCTTGTaGTGGAGCAGGTATTCCATGCATGGCCCTGTCTCTCCAGATTCC	+
Preference number: 5 (lower is better) Translates to: GQSAFPKVYNVSKIL*WSRYSMHGPVSPDS Trigger: GGAATCTGGAGAGACAGGGCCATGCATGGAATACCTGCTCCATCACAAGATCTTGGAAACGTTATACACCTTAGGGAAAGCCGACTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR CAA 90 bp	ACAAGATGTCCGTGTGTCCTGCAGCTGTACCCTGCACCTTGGCTAACCAAGACAGATCCTGTTTCAGCTTaGCACACACGATGCAGAGAA	+
Preference number: 5 (lower is better) Translates to: TRCPCVLQLYPAPWLTKTDPVSA*HTRCRE Trigger: TTCTCTGCATCGTGTGTGCAAAGCTGAAACAGGATC...TGTCTTGGTTAGCCAAGGTGCAGGGTACAGCTGCAGGACACACGGACATCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR CAA 90 bp	GGGCTGCTTAACGCTTCAATAAGGACGAGGACAGGAGCTCCAGAACCACAGCCATTATGCACTTCCGTCTaGCCATCATTTTTGGGATGG	+
Preference number: 5 (lower is better) Translates to: GLLNASIRTRTGAPEPQPLCTSV*PSFLGW Trigger: CCATCCCAAAAATGATGGCAAGACGGAAGTGCATAA...TGGCTGTGGTTCTGGAGCTCCTGTCCTCGTCCTTATTGAAGCGTTAAGCAGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS CCA 90 bp	TCCATGCATGGCCCTGTCTCTCCAGATTCCCGCTCATTTTCTTCTTaGACCAGGATGTCTAACATCTGTTCCAGGTGGGATGGGATGTTT	+
Preference number: 5 (lower is better) Translates to: SMHGPVSPDSRSFSS*TRMSNICSRWDGMF Trigger: AAACATCCCATCCCACCTGGAACAGATGTTAGACATCCTGGTCCAAGAAGAAAATGAGCGGGAATCTGGAGAGACAGGGCCATGCATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR CAA 90 bp	CCTGCAGATTCACATCGTACGGCTGATCGAGAATTCTTCCCATTCTGTCAAATAACAGGCCTGTGTACGTaGATGTGTGGAAGCAGGGGC	+
Preference number: 5 (lower is better) Translates to: PADSHRTADREFFPFCQITGLCT*MCGSRG Trigger: GCCCCTGCTTCCACACATCAACGTACACAGGCCTGT...TATTTGACAGAATGGGAAGAATTCTCGATCAGCCGTACGATGTGAATCTGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
CDS-3UTR CAA 90 bp	CACCTCACTGGTAGCCCACAGAGCACTATGAGAACATTAACAAACACCTGTACCTCTCTTCATTCTCCGTaGGCGTTGCAAGGACCTCAC	+
Preference number: 5 (lower is better) Translates to: HLTGSPQSTMRTLTNTCTSLHSP*ALQGPH Trigger: GTGAGGTCCTTGCAACGCCAACGGAGAATGAAGAGA...GGTACAGGTGTTTGTTAATGTTCTCATAGTGCTCTGTGGGCTACCAGTGAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR CAA 90 bp	ACAAAAATGCCAGCCAAGTTCCTGACATCACAAGCTTTGCAGCTTCTCGGTCACGGCAGTGAGGTGACATaGAGGTCATCTAGGCTTGCA	+
Preference number: 5 (lower is better) Translates to: TKMPAKFLTSQALQLLGHGSEVT*RSSRLA Trigger: TGCAAGCCTAGATGACCTCAATGTCACCTCACTGCC...GTGACCGAGAAGCTGCAAAGCTTGTGATGTCAGGAACTTGGCTGGCATTTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS TCA 90 bp	CTCCTCTGGACACCAGGGACTTTGATTTGTTCTCCAGGAAAAAGTTaGCCAAGTAGGGATCCTGTTTCAGCTTTGCACACACGATGCAGA	+
Preference number: 5 (lower is better) Translates to: LLWTPGTLICSPGKS*PSRDPVSALHTRCR Trigger: TCTGCATCGTGTGTGCAAAGCTGAAACAGGATCCCTACTTGGTCAACTTTTTCCTGGAGAACAAATCAAAGTCCCTGGTGTCCAGAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS CCA 90 bp	CGCTCATTTTCTTCTTGGACCAGGATGTCTAACATCTGTTCCAGGTaGGATGGGATGTTTGTGTCGGTCACTGGGGCTTTATCATCTGAA	+
Preference number: 5 (lower is better) Translates to: RSFSSWTRMSNICSR*DGMFVSVTGALSSE Trigger: TTCAGATGATAAAGCCCCAGTGACCGACACAAACATCCCATCCCACCTGGAACAGATGTTAGACATCCTGGTCCAAGAAGAAAATGAGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS-3UTR CAA 90 bp	CAGGAGGCCGACAGAGTATCAGTGACAGTATTTTACAGGGCCCAGAAGAGGATTTGGACACCAGGGACTTaGATTTGTTCTCCAGGAAAA	+
Preference number: 5 (lower is better) Translates to: QEADRVSVTVFYRAQKRIWTPGT*ICSPGK Trigger: TTTTCCTGGAGAACAAATCAAAGTCCCTGGTGTCCA...AATCCTCTTCTGGGCCCTGTAAAATACTGTCACTGATACTCTGTCGGCCTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS GCA 90 bp	AGGTGTATAACGTTTCCAAGATCTTGTGATGGAGCAGGTATTCCATaGATGGCCCTGTCTCTCCAGATTCCCGCTCATTTTCTTCTTGGA	+
Preference number: 5 (lower is better) Translates to: RCITFPRSCDGAGIP*MALSLQIPAHFLLG Trigger: TCCAAGAAGAAAATGAGCGGGAATCTGGAGAGACAGGGCCATGCATGGAATACCTGCTCCATCACAAGATCTTGGAAACGTTATACACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS GCA 90 bp	GTTCTCCAGGAAAAAGTTGACCAAGTAGGGATCCTGTTTCAGCTTTaGACACACGATGCAGAGAAACTGGATCTCTTCATTCTCCGTTGG	+
Preference number: 5 (lower is better) Translates to: VLQEKVDQVGILFQL*THDAEKLDLFILRW Trigger: CCAACGGAGAATGAAGAGATCCAGTTTCTCTGCATCGTGTGTGCAAAGCTGAAACAGGATCCCTACTTGGTCAACTTTTTCCTGGAGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS GCA 90 bp	AACCTCCAGGAAAAAGTTGACCAAGTAGGGATCCTGTTTCAGCTTTaGACACACGATGCAGAGAAACTGGATCTCTTCATTCTCCGTTGG	+
Preference number: 5 (lower is better) Translates to: NLQEKVDQVGILFQL*THDAEKLDLFILRW Trigger: CCAACGGAGAATGAAGAGATCCAGTTTCTCTGCATCGTGTGTGCAAAGCTGAAACAGGATCCCTACTTGGTCAACTTTTTCCTGGAGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237170.2
CDS-3UTR CAA 90 bp	CACCTCACTGGTAGCCCACAGAGCACTATGAGAACATTAACAAACACCTGTACCACCAGGGACTTTGATTaGTTCTCCAGGAAAAAGTTG	+
Preference number: 5 (lower is better) Translates to: HLTGSPQSTMRTLTNTCTTRDFD*FSRKKL Trigger: CAACTTTTTCCTGGAGAACAAATCAAAGTCCCTGGT...GGTACAGGTGTTTGTTAATGTTCTCATAGTGCTCTGTGGGCTACCAGTGAGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS-3UTR CAA 90 bp	CTGCCACACACGTCAGTACGGAAGTCAACCATAAAGCAATTTCATAAAGCAATTCAAATCCACTCTTGGTaGGGCAGAGTGTTATCTGGT	+
Preference number: 5 (lower is better) Translates to: LPHTSVRKSTIKQFHKAIQIHSW*GRVLSG Trigger: ACCAGATAACACTCTGCCCAACCAAGAGTGGATTTG...AATTGCTTTATGAAATTGCTTTATGGTTGACTTCCGTACTGACGTGTGTGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS TCA 72 bp	AGTCTGCCGGTCAGCAGCTCGCACAGGCAGGTGCTCTaGGCAAGGCACTTGGCAGCCGCAGGCTCCGGTAGG	+
Preference number: 6 (lower is better) Translates to: SLPVSSSHRQVL*ARHLAAAGSGR Trigger: CCTACCGGAGCCTGCGGCTGCCAAGTGCCTTGCTCAGAGCACCTGCCTGTGCGAGCTGCTGACCGGCAGACT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS CAA 72 bp	GGCCGGACGGCAGAGGCCTCCGGCAGTGAGGTGACATaGAGGTCATCTAGGCTTGCAGACAGGTCATCCATC	+
Preference number: 6 (lower is better) Translates to: GRTAEASGSEVT*RSSRLADRSSI Trigger: GATGGATGACCTGTCTGCAAGCCTAGATGACCTCAATGTCACCTCACTGCCGGAGGCCTCTGCCGTCCGGCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS TCA 72 bp	TGCTGGCACTGGCTGACGTCTCCTGACCCCGGGTCCTaGCCTTTTGGGCCATCCTCTGAGATGACACTCAGA	+
Preference number: 6 (lower is better) Translates to: CWHWLTSPDPGS*PFGPSSEMTLR Trigger: TCTGAGTGTCATCTCAGAGGATGGCCCAAAAGGTCAGGACCCGGGGTCAGGAGACGTCAGCCAGTGCCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS CCA 72 bp	GCCCGCTTCCCCGGGAACGCCGAAGCGTCTTCTTTATaGCTGTATGAGTCCAACCCCCAGTTAACTGCCTCC	+
Preference number: 6 (lower is better) Translates to: ARFPGNAEASSL*LYESNPQLTAS Trigger: GGAGGCAGTTAACTGGGGGTTGGACTCATACAGCCATAAAGAAGACGCTTCGGCGTTCCCGGGGAAGCGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS CCA 72 bp	GGCCCTGTCTCTCCAGATTCCCGCTCATTTTCTTCTTaGACCAGGATGTCTAACATCTGTTCCAGGTGGGAT	+
Preference number: 6 (lower is better) Translates to: GPVSPDSRSFSS*TRMSNICSRWD Trigger: ATCCCACCTGGAACAGATGTTAGACATCCTGGTCCAAGAAGAAAATGAGCGGGAATCTGGAGAGACAGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS CAA 90 bp	CACACACGATGCAGAGAAACTGGATCTCTTCATTCTCCGTTGGCGTaGCAAGGACCTCACCACAGAGTCGAATTAATTTCTGCACAGGCC	+
Preference number: 6 (lower is better) Translates to: HTRCRETGSLHSPLA*QGPHHRVELISAQA Trigger: GGCCTGTGCAGAAATTAATTCGACTCTGTGGTGAGGTCCTTGCAACGCCAACGGAGAATGAAGAGATCCAGTTTCTCTGCATCGTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS GCA 72 bp	CCAAGTAGGGATCCTGTTTCAGCTTTGCACACACGATaGAGAGAAACTGGATCTCTTCATTCTCCGTTGGCG	+
Preference number: 6 (lower is better) Translates to: PSRDPVSALHTR*RETGSLHSPLA Trigger: CGCCAACGGAGAATGAAGAGATCCAGTTTCTCTGCATCGTGTGTGCAAAGCTGAAACAGGATCCCTACTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS CCA 72 bp	TCTTCTTGGACCAGGATGTCTAACATCTGTTCCAGGTaGGATGGGATGTTTGTGTCGGTCACTGGGGCTTTA	+
Preference number: 6 (lower is better) Translates to: SSWTRMSNICSR*DGMFVSVTGAL Trigger: TAAAGCCCCAGTGACCGACACAAACATCCCATCCCACCTGGAACAGATGTTAGACATCCTGGTCCAAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS GCA 72 bp	ACGTTTCCAAGATCTTGTGATGGAGCAGGTATTCCATaGATGGCCCTGTCTCTCCAGATTCCCGCTCATTTT	+
Preference number: 6 (lower is better) Translates to: TFPRSCDGAGIP*MALSLQIPAHF Trigger: AAAATGAGCGGGAATCTGGAGAGACAGGGCCATGCATGGAATACCTGCTCCATCACAAGATCTTGGAAACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS CAA 72 bp	ACACGATGCAGAGAAACTGGATCTCTTCATTCTCCGTaGGCGTTGCAAGGACCTCACCACAGAGTCGAATTA	+
Preference number: 6 (lower is better) Translates to: TRCRETGSLHSP*ALQGPHHRVEL Trigger: TAATTCGACTCTGTGGTGAGGTCCTTGCAACGCCAACGGAGAATGAAGAGATCCAGTTTCTCTGCATCGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS CAA 90 bp	CTTGGACCAGGATGTCTAACATCTGTTCCAGGTGGGATGGGATGTTaGTGTCGGTCACTGGGGCTTTATCATCTGAAGTTTCTATGTAGT	+
Preference number: 6 (lower is better) Translates to: LGPGCLTSVPGGMGC*CRSLGLYHLKFLCS Trigger: ACTACATAGAAACTTCAGATGATAAAGCCCCAGTGACCGACACAAACATCCCATCCCACCTGGAACAGATGTTAGACATCCTGGTCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS TCA 72 bp	GCTTTCCCTAAGGTGTATAACGTTTCCAAGATCTTGTaGTGGAGCAGGTATTCCATGCATGGCCCTGTCTCT	+
Preference number: 6 (lower is better) Translates to: AFPKVYNVSKIL*WSRYSMHGPVS Trigger: AGAGACAGGGCCATGCATGGAATACCTGCTCCATCACAAGATCTTGGAAACGTTATACACCTTAGGGAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS CAA 72 bp	GGATGTCTAACATCTGTTCCAGGTGGGATGGGATGTTaGTGTCGGTCACTGGGGCTTTATCATCTGAAGTTT	+
Preference number: 6 (lower is better) Translates to: GCLTSVPGGMGC*CRSLGLYHLKF Trigger: AAACTTCAGATGATAAAGCCCCAGTGACCGACACAAACATCCCATCCCACCTGGAACAGATGTTAGACATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2
CDS TCA 72 bp	ACACCAGGGACTTTGATTTGTTCTCCAGGAAAAAGTTaGCCAAGTAGGGATCCTGTTTCAGCTTTGCACACA	+
Preference number: 6 (lower is better) Translates to: TPGTLICSPGKS*PSRDPVSALHT Trigger: TGTGTGCAAAGCTGAAACAGGATCCCTACTTGGTCAACTTTTTCCTGGAGAACAAATCAAAGTCCCTGGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036407.6
CDS GCA 72 bp	GAAAAAGTTGACCAAGTAGGGATCCTGTTTCAGCTTTaGACACACGATGCAGAGAAACTGGATCTCTTCATT	+
Preference number: 6 (lower is better) Translates to: EKVDQVGILFQL*THDAEKLDLFI Trigger: AATGAAGAGATCCAGTTTCTCTGCATCGTGTGTGCAAAGCTGAAACAGGATCCCTACTTGGTCAACTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036407.6 ENSMUST00000237170.2

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu