Pregenerated sensors for FAM160A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044465Ensembl transcript IDs: ENSMUST00000048079.14, ENSMUST00000074686.10, ENSMUST00000118726.8, ENSMUST00000122327.7, ENSMUST00000137158.8, ENSMUST00000179474.9, ENSMUST00000210448.2, ENSMUST00000211549.2
Found 668 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTCTCCCTGCCTCTCTGCTAGGCCCACCTCGTGCCCATGAGGCATaGTCTGGTCGAGGTGGGCTAGGGGCATGGTGCCGGCAGCAGCGT | + |
|
Preference number: 1 (lower is better) Translates to: LLPASLLGPPRAHEA*SGRGGLGAWCRQQR Trigger: ACGCTGCTGCCGGCACCATGCCCCTAGCCCACCTCGACCAGAGCATGCCTCATGGGCACGAGGTGGGCCTAGCAGAGAGGCAGGGAGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR GCA 90 bp | TGGAGAACCTGCACCGCCTGTCGGGCCCTGGTTGGGCTGTGTGCATaGCGCAGGAGTAATTCCCCCAAGGATGGCCTCCGGCTCCTCACT | + |
|
Preference number: 1 (lower is better) Translates to: WRTCTACRALVGLCA*RRSNSPKDGLRLLT Trigger: AGTGAGGAGCCGGAGGCCATCCTTGGGGGAATTACTCCTGCGGCATGCACACAGCCCAACCAGGGCCCGACAGGCGGTGCAGGTTCTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000137158.8 ENSMUST00000210448.2 ENSMUST00000211549.2 |
||
| 3UTR GCA 90 bp | CCACCTAGTCCAAGTCCTGTTCCATCTCGCCCAGGTTGGAGAACCTaGACCGCCTGTCGGGCCCTGGTTGGGCTGTGTGCATGCCGCAGG | + |
|
Preference number: 1 (lower is better) Translates to: PPSPSPVPSRPGWRT*TACRALVGLCACRR Trigger: CCTGCGGCATGCACACAGCCCAACCAGGGCCCGACAGGCGGTGCAGGTTCTCCAACCTGGGCGAGATGGAACAGGACTTGGACTAGGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000137158.8 ENSMUST00000210448.2 ENSMUST00000211549.2 |
||
| 3UTR CCA 90 bp | GGAGAGCCCCCACCTAGTCCAAGTCCTGTTCCATCTCGCCCAGGTTaGAGAACCTGCACCGCCTGTCGGGCCCTGGTTGGGCTGTGTGCA | + |
|
Preference number: 1 (lower is better) Translates to: GEPPPSPSPVPSRPG*RTCTACRALVGLCA Trigger: TGCACACAGCCCAACCAGGGCCCGACAGGCGGTGCAGGTTCTCCAACCTGGGCGAGATGGAACAGGACTTGGACTAGGTGGGGGCTCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000137158.8 ENSMUST00000210448.2 ENSMUST00000211549.2 |
||
| 3UTR CCA 90 bp | TTCCATCTCGCCCAGGTTGGAGAACCTGCACCGCCTGTCGGGCCCTaGTTGGGCTGTGTGCATGCCGCAGGAGTAATTCCCCCAAGGATG | + |
|
Preference number: 1 (lower is better) Translates to: FHLAQVGEPAPPVGP*LGCVHAAGVIPPRM Trigger: CATCCTTGGGGGAATTACTCCTGCGGCATGCACACAGCCCAACCAGGGCCCGACAGGCGGTGCAGGTTCTCCAACCTGGGCGAGATGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000137158.8 ENSMUST00000210448.2 ENSMUST00000211549.2 |
||
| 3UTR TCA 90 bp | CAGAGCCAGACGAGATGGTGTGGAGGGGCGGGGCACTGTTACCACTaGCGAAGAATCAACACTTGGGCTTCCAGGGCCCGTGATGTCCTC | + |
|
Preference number: 1 (lower is better) Translates to: QSQTRWCGGAGHCYH*RRINTWASRARDVL Trigger: GAGGACATCACGGGCCCTGGAAGCCCAAGTGTTGATTCTTCGTCAGTGGTAACAGTGCCCCGCCCCTCCACACCATCTCGTCTGGCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR GCA 90 bp | AGTGCAAGGGCAGGCACTCCTATCCAGTCTTCCCGGCGCAAGCAGTaGCAATCATCCCCCGGAACCTCAATCTTTCGAGGCAGTGAGGAG | + |
|
Preference number: 1 (lower is better) Translates to: SARAGTPIQSSRRKQ*QSSPGTSIFRGSEE Trigger: CTCCTCACTGCCTCGAAAGATTGAGGTTCCGGGGGATGATTGGCACTGCTTGCGCCGGGAAGACTGGATAGGAGTGCCTGCCCTTGCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR GCA 90 bp | GAGGTAGTGGAGGCTCTAAGGGAGGCTCTGAGCCAGCTCCACCATTaGTCAATGCCACCTCCAGCTCCTGGAGCTCTTGCCCAAAGCTCT | + |
|
Preference number: 1 (lower is better) Translates to: EVVEALREALSQLHH*SMPPPAPGALAQSS Trigger: AGAGCTTTGGGCAAGAGCTCCAGGAGCTGGAGGTGGCATTGAGCAATGGTGGAGCTGGCTCAGAGCCTCCCTTAGAGCCTCCACTACCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR GCA 90 bp | CTCCGAAGCACCCACAGCATCTACGTCATCTACCAGGTCTTCTCCTaGACCTGGCTGCAGCTAGGGCTTTTGCCTACAGCCCGTGAACCC | + |
|
Preference number: 1 (lower is better) Translates to: LRSTHSIYVIYQVFS*TWLQLGLLPTAREP Trigger: GGGTTCACGGGCTGTAGGCAAAAGCCCTAGCTGCAGCCAGGTGCAGGAGAAGACCTGGTAGATGACGTAGATGCTGTGGGTGCTTCGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 90 bp | AGCACCCACAGCATCTACGTCATCTACCAGGTCTTCTCCTGCACCTaGCTGCAGCTAGGGCTTTTGCCTACAGCCCGTGAACCCCAGCTG | + |
|
Preference number: 1 (lower is better) Translates to: STHSIYVIYQVFSCT*LQLGLLPTAREPQL Trigger: CAGCTGGGGTTCACGGGCTGTAGGCAAAAGCCCTAGCTGCAGCCAGGTGCAGGAGAAGACCTGGTAGATGACGTAGATGCTGTGGGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 90 bp | GCCCAGAGTTTGTACAGGACCTTCATGAAGGAGCCAAGGGGAGGGTaGGGTGGAAGCATGGTTGTGGTAAGGTGGCGGGATGGGGGTGTT | + |
|
Preference number: 1 (lower is better) Translates to: AQSLYRTFMKEPRGG*GGSMVVVRWRDGGV Trigger: AACACCCCCATCCCGCCACCTTACCACAACCATGCTTCCACCTCACCCTCCCCTTGGCTCCTTCATGAAGGTCCTGTACAAACTCTGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 90 bp | CCAGCTCCACCATTGCTCAATGCCACCTCCAGCTCCTGGAGCTCTTaGCCAAAGCTCTCTAGTCCTGCCATGTCCTCAGAGGTACCCTCT | + |
|
Preference number: 1 (lower is better) Translates to: PAPPLLNATSSSWSS*PKLSSPAMSSEVPS Trigger: AGAGGGTACCTCTGAGGACATGGCAGGACTAGAGAGCTTTGGGCAAGAGCTCCAGGAGCTGGAGGTGGCATTGAGCAATGGTGGAGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR TCA 90 bp | CTTCTCCTGCACCTGGCTGCAGCTAGGGCTTTTGCCTACAGCCCGTaGACCCCAGCTGATCCGGTTACAGCGGTCACTACCTATTGCTTT | + |
|
Preference number: 1 (lower is better) Translates to: LLLHLAAARAFAYSP*TPADPVTAVTTYCF Trigger: AAAGCAATAGGTAGTGACCGCTGTAACCGGATCAGCTGGGGTTCACGGGCTGTAGGCAAAAGCCCTAGCTGCAGCCAGGTGCAGGAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 90 bp | GTCTGCGCAAGAAAGTTGCTTTCCTGCTGCTACCACCAGGGCAGGTaGGCCTACAACAGAATCTTCCCTGGCTCCGAAGCACCCACAGCA | + |
|
Preference number: 1 (lower is better) Translates to: VCARKLLSCCYHQGR*AYNRIFPGSEAPTA Trigger: TGCTGTGGGTGCTTCGGAGCCAGGGAAGATTCTGTTGTAGGCTCACCTGCCCTGGTGGTAGCAGCAGGAAAGCAACTTTCTTGCGCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 90 bp | CCCCAGCTGATCCGGTTACAGCGGTCACTACCTATTGCTTTCTCCTaGCTCAAGTTTTCACTGCAGCCCAAGGGTGTGCTGGGACCACAG | + |
|
Preference number: 1 (lower is better) Translates to: PQLIRLQRSLPIAFS*LKFSLQPKGVLGPQ Trigger: CTGTGGTCCCAGCACACCCTTGGGCTGCAGTGAAAACTTGAGGCAGGAGAAAGCAATAGGTAGTGACCGCTGTAACCGGATCAGCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 90 bp | GAGTTTGTACAGGACCTTCATGAAGGAGCCAAGGGGAGGGTGAGGTaGAAGCATGGTTGTGGTAAGGTGGCGGGATGGGGGTGTTGTAGC | + |
|
Preference number: 1 (lower is better) Translates to: EFVQDLHEGAKGRVR*KHGCGKVAGWGCCS Trigger: GCTACAACACCCCCATCCCGCCACCTTACCACAACCATGCTTCCACCTCACCCTCCCCTTGGCTCCTTCATGAAGGTCCTGTACAAACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 90 bp | CTGCTGCTACCACCAGGGCAGGTGAGCCTACAACAGAATCTTCCCTaGCTCCGAAGCACCCACAGCATCTACGTCATCTACCAGGTCTTC | + |
|
Preference number: 1 (lower is better) Translates to: LLLPPGQVSLQQNLP*LRSTHSIYVIYQVF Trigger: GAAGACCTGGTAGATGACGTAGATGCTGTGGGTGCTTCGGAGCCAGGGAAGATTCTGTTGTAGGCTCACCTGCCCTGGTGGTAGCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 90 bp | CTGCACACGGGAATACTCACCAAATGGCCGAGCCGAGACAGCCTATaGAGAAATGCGAATGATGGATGGGCAGCCCTGCAGGATTCGCCT | + |
|
Preference number: 1 (lower is better) Translates to: LHTGILTKWPSRDSL*RNANDGWAALQDSP Trigger: AGGCGAATCCTGCAGGGCTGCCCATCCATCATTCGCATTTCTTCATAGGCTGTCTCGGCTCGGCCATTTGGTGAGTATTCCCGTGTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 90 bp | CGGGAGTTGCTGCCAATACGGGCAACGAGCGTGTCAAGGATGGTGTaGGTATCATGCCGATGTAACAACAGGAATCGCAGGAAGGTACGG | + |
|
Preference number: 1 (lower is better) Translates to: RELLPIRATSVSRMV*VSCRCNNRNRRKVR Trigger: CCGTACCTTCCTGCGATTCCTGTTGTTACATCGGCATGATACCCACACCATCCTTGACACGCTCGTTGCCCGTATTGGCAGCAACTCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR CCA 90 bp | AGAGCCGGGAGTTGCTGCCAATACGGGCAACGAGCGTGTCAAGGATaGTGTGGGTATCATGCCGATGTAACAACAGGAATCGCAGGAAGG | + |
|
Preference number: 1 (lower is better) Translates to: RAGSCCQYGQRACQG*CGYHADVTTGIAGR Trigger: CCTTCCTGCGATTCCTGTTGTTACATCGGCATGATACCCACACCATCCTTGACACGCTCGTTGCCCGTATTGGCAGCAACTCCCGGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR CCA 90 bp | CACCTAGGCTCTGTTGCCGAAGAAACAGAGCCAGACGAGATGGTGTaGAGGGGCGGGGCACTGTTACCACTGACGAAGAATCAACACTTG | + |
|
Preference number: 1 (lower is better) Translates to: HLGSVAEETEPDEMV*RGGALLPLTKNQHL Trigger: CAAGTGTTGATTCTTCGTCAGTGGTAACAGTGCCCCGCCCCTCCACACCATCTCGTCTGGCTCTGTTTCTTCGGCAACAGAGCCTAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR TCA 90 bp | AGTTTTCACTGCAGCCCAAGGGTGTGCTGGGACCACAGAAGTCTCTaGCCAAAGACCCATTGCCCCAAGGAGCCAACTGGGTTAGACCTA | + |
|
Preference number: 1 (lower is better) Translates to: SFHCSPRVCWDHRSL*PKTHCPKEPTGLDL Trigger: TAGGTCTAACCCAGTTGGCTCCTTGGGGCAATGGGTCTTTGGTCAGAGACTTCTGTGGTCCCAGCACACCCTTGGGCTGCAGTGAAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 90 bp | ACTCACCAAATGGCCGAGCCGAGACAGCCTATGAAGAAATGCGAATaGTGGATGGGCAGCCCTGCAGGATTCGCCTACATATGGGAGGTC | + |
|
Preference number: 1 (lower is better) Translates to: THQMAEPRQPMKKCE*WMGSPAGFAYIWEV Trigger: GACCTCCCATATGTAGGCGAATCCTGCAGGGCTGCCCATCCATCATTCGCATTTCTTCATAGGCTGTCTCGGCTCGGCCATTTGGTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 90 bp | GTCCAATGTAGTGGCAGTACCTTTCCTGTCGGATGCAGCCTACTATaGTCTACTGGGCGTGCTAGTGAAACAGTCCCGTCCAGCCCACAC | + |
|
Preference number: 1 (lower is better) Translates to: VQCSGSTFPVGCSLL*STGRASETVPSSPH Trigger: GTGTGGGCTGGACGGGACTGTTTCACTAGCACGCCCAGTAGATCATAGTAGGCTGCATCCGACAGGAAAGGTACTGCCACTACATTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 90 bp | CAGGCCACAGAAGGCCCTGATTGTCCATGGAAGAAAACTAAGGATTaGGGGGCCCAAAGCCTGAGATGGGAGGAAGAGATACCTCCTCTG | + |
|
Preference number: 1 (lower is better) Translates to: QATEGPDCPWKKTKD*GAQSLRWEEEIPPL Trigger: CAGAGGAGGTATCTCTTCCTCCCATCTCAGGCTTTGGGCCCCTCAATCCTTAGTTTTCTTCCATGGACAATCAGGGCCTTCTGTGGCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000137158.8 ENSMUST00000211549.2 |
||
| 3UTR GCA 90 bp | CTGCCAATACGGGCAACGAGCGTGTCAAGGATGGTGTGGGTATCATaGCGATGTAACAACAGGAATCGCAGGAAGGTACGGAGCAAAGCA | + |
|
Preference number: 1 (lower is better) Translates to: LPIRATSVSRMVWVS*RCNNRNRRKVRSKA Trigger: TGCTTTGCTCCGTACCTTCCTGCGATTCCTGTTGTTACATCGGCATGATACCCACACCATCCTTGACACGCTCGTTGCCCGTATTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR GCA 90 bp | GCCGAGACAGCCTATGAAGAAATGCGAATGATGGATGGGCAGCCCTaGAGGATTCGCCTACATATGGGAGGTCTGCGCAAGAAAGTTGCT | + |
|
Preference number: 1 (lower is better) Translates to: AETAYEEMRMMDGQP*RIRLHMGGLRKKVA Trigger: AGCAACTTTCTTGCGCAGACCTCCCATATGTAGGCGAATCCTGCAGGGCTGCCCATCCATCATTCGCATTTCTTCATAGGCTGTCTCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 90 bp | CCAAATCTTCTAGAACAGGCAGGGTCTGAGGGTATCTTTGCCCACTaGACACGGGAATACTCACCAAATGGCCGAGCCGAGACAGCCTAT | + |
|
Preference number: 1 (lower is better) Translates to: PNLLEQAGSEGIFAH*TREYSPNGRAETAY Trigger: ATAGGCTGTCTCGGCTCGGCCATTTGGTGAGTATTCCCGTGTGCAGTGGGCAAAGATACCCTCAGACCCTGCCTGTTCTAGAAGATTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 90 bp | GGCATGCACGTACCACTTCAAGCTGGCTCTGAGTACAGCCAGCTTTaGAGGACAGCATTTCTCTCTAGCTCAAGCTGTAAGAGGACACCC | + |
|
Preference number: 1 (lower is better) Translates to: GMHVPLQAGSEYSQL*RTAFLSSSSCKRTP Trigger: GGGTGTCCTCTTACAGCTTGAGCTAGAGAGAAATGCTGTCCTGCAAAGCTGGCTGTACTCAGAGCCAGCTTGAAGTGGTACGTGCATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 90 bp | CCACAGAAGTCTCTGACCAAAGACCCATTGCCCCAAGGAGCCAACTaGGTTAGACCTAGCCTTAGCATCATATCAACTCTGGCCCCCACA | + |
|
Preference number: 1 (lower is better) Translates to: PQKSLTKDPLPQGAN*VRPSLSIISTLAPT Trigger: TGTGGGGGCCAGAGTTGATATGATGCTAAGGCTAGGTCTAACCCAGTTGGCTCCTTGGGGCAATGGGTCTTTGGTCAGAGACTTCTGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 90 bp | GTCAGTAGCCCCCACCTGCTAACACTGGATGAAGCAGATGCCACTTaGGCCCTCATCAAGGATAAGGTAGGTAAAGTGAGAGGGCTAAGG | + |
|
Preference number: 1 (lower is better) Translates to: VSSPHLLTLDEADAT*ALIKDKVGKVRGLR Trigger: CCTTAGCCCTCTCACTTTACCTACCTTATCCTTGATGAGGGCCCAAGTGGCATCTGCTTCATCCAGTGTTAGCAGGTGGGGGCTACTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 90 bp | ATGAGGTACTTCTTGGCTTTGGATAGCAGAGCAGGGAAGTCCTCCTaGGAGGCCGCAAAGCTCTCAATCTTATTCTTCACAGAGCCCAGC | + |
|
Preference number: 1 (lower is better) Translates to: MRYFLALDSRAGKSS*EAAKLSILFFTEPS Trigger: GCTGGGCTCTGTGAAGAATAAGATTGAGAGCTTTGCGGCCTCCCAGGAGGACTTCCCTGCTCTGCTATCCAAAGCCAAGAAGTACCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137158.8 ENSMUST00000211549.2 |
||
| 3UTR TCA 90 bp | GAAATCAGTAGGGCTGCTACCAAATCTTCTAGAACAGGCAGGGTCTaGGGGTATCTTTGCCCACTGCACACGGGAATACTCACCAAATGG | + |
|
Preference number: 1 (lower is better) Translates to: EISRAATKSSRTGRV*GYLCPLHTGILTKW Trigger: CCATTTGGTGAGTATTCCCGTGTGCAGTGGGCAAAGATACCCTCAGACCCTGCCTGTTCTAGAAGATTTGGTAGCAGCCCTACTGATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 90 bp | TTAATTCCTCTCCTGAAAGCAGGAGCAAATCTACTGTCAAGCACTTaGTCAAAGCGCTGGCACTGCCGTGCATTAGTACTGGCTGAGGAG | + |
|
Preference number: 1 (lower is better) Translates to: LIPLLKAGANLLSST*SKRWHCRALVLAEE Trigger: CTCCTCAGCCAGTACTAATGCACGGCAGTGCCAGCGCTTTGAGCAAGTGCTTGACAGTAGATTTGCTCCTGCTTTCAGGAGAGGAATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 90 bp | GCATTAGTACTGGCTGAGGAGACGGGCCTTTGGCTTGAGACCAACTaGACTGCCTTTTGGACAGTTTTCCTGATAACACTTTCCTATCAG | + |
|
Preference number: 1 (lower is better) Translates to: ALVLAEETGLWLETN*TAFWTVFLITLSYQ Trigger: CTGATAGGAAAGTGTTATCAGGAAAACTGTCCAAAAGGCAGTGCAGTTGGTCTCAAGCCAAAGGCCCGTCTCCTCAGCCAGTACTAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 90 bp | AAGGAGCCAACTGGGTTAGACCTAGCCTTAGCATCATATCAACTCTaGCCCCCACATCAGTATCTGCTGATACCCATGAAGTTGCTGATG | + |
|
Preference number: 1 (lower is better) Translates to: KEPTGLDLALASYQL*PPHQYLLIPMKLLM Trigger: CATCAGCAACTTCATGGGTATCAGCAGATACTGATGTGGGGGCCAGAGTTGATATGATGCTAAGGCTAGGTCTAACCCAGTTGGCTCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 90 bp | CTCATCAAGGATAAGGTAGGTAAAGTGAGAGGGCTAAGGGAAAAGTaGCAAAGTATGACCAGGCTGGGTCTTGGGTGGTTTCTGTGTAGG | + |
|
Preference number: 1 (lower is better) Translates to: LIKDKVGKVRGLREK*QSMTRLGLGWFLCR Trigger: CCTACACAGAAACCACCCAAGACCCAGCCTGGTCATACTTTGCCACTTTTCCCTTAGCCCTCTCACTTTACCTACCTTATCCTTGATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 90 bp | TTCAGAAGGCTGAGGCAGGAGGACTGCTGTGAAATTCGGGCAGCTTaGAGCTACATAATGAGTTCAAAGCCATTCTGGATTACACAGTCA | + |
|
Preference number: 1 (lower is better) Translates to: FRRLRQEDCCEIRAA*SYIMSSKPFWITQS Trigger: TGACTGTGTAATCCAGAATGGCTTTGAACTCATTATGTAGCTGCAAGCTGCCCGAATTTCACAGCAGTCCTCCTGCCTCAGCCTTCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 90 bp | CCATCCTCCCACCATGGGCCTATAAGTGGCTTCCTGGCATCCCATTaGCCTCTGAATGAAACAGTAGTTTATGAAAGGCATATACATATG | + |
|
Preference number: 1 (lower is better) Translates to: PSSHHGPISGFLASH*PLNETVVYERHIHM Trigger: CATATGTATATGCCTTTCATAAACTACTGTTTCATTCAGAGGTCAATGGGATGCCAGGAAGCCACTTATAGGCCCATGGTGGGAGGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 90 bp | AGGAACTTGGTTTCAGTTGTCTTAAGAAACCTGAGGTTTCTCACTTaGACTGTTGTGGCTTCTCTTGCATCCTGTCCACTTCCTTCTCAC | + |
|
Preference number: 1 (lower is better) Translates to: RNLVSVVLRNLRFLT*TVVASLASCPLPSH Trigger: GTGAGAAGGAAGTGGACAGGATGCAAGAGAAGCCACAACAGTCCAAGTGAGAAACCTCAGGTTTCTTAAGACAACTGAAACCAAGTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 90 bp | CTAAGAGCTTCTGCTTCCTATTTAACCAATAAGCCATCACTGCACTaGCCTCATACATGTCTTCTCATTCTGGACTCCCCTTGTCATCTG | + |
|
Preference number: 1 (lower is better) Translates to: LRASASYLTNKPSLH*PHTCLLILDSPCHL Trigger: CAGATGACAAGGGGAGTCCAGAATGAGAAGACATGTATGAGGTCAGTGCAGTGATGGCTTATTGGTTAAATAGGAAGCAGAAGCTCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 90 bp | GATACATGGAAAGAGAAATCATGTGCAATCAATGTTCATGAGCAATaGGTCTGTTACCATCCGCCGCGGGAAGATAAGGCACCTTCAACT | + |
|
Preference number: 1 (lower is better) Translates to: DTWKEKSCAINVHEQ*VCYHPPREDKAPST Trigger: AGTTGAAGGTGCCTTATCTTCCCGCGGCGGATGGTAACAGACTCATTGCTCATGAACATTGATTGCACATGATTTCTCTTTCCATGTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 90 bp | CTTAAGAAACCTGAGGTTTCTCACTTGGACTGTTGTGGCTTCTCTTaGATCCTGTCCACTTCCTTCTCACTATGCCACATGTATTTCTCT | + |
|
Preference number: 1 (lower is better) Translates to: LKKPEVSHLDCCGFS*ILSTSFSLCHMYFS Trigger: AGAGAAATACATGTGGCATAGTGAGAAGGAAGTGGACAGGATGCAAGAGAAGCCACAACAGTCCAAGTGAGAAACCTCAGGTTTCTTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 90 bp | CTAATGGTCTCTTCTGTCCTCCACTTCCACCAAGCACACACACGATaGACAGCCAGACATGAAGGCAAAACACCCATAAACATTAAAAAT | + |
|
Preference number: 1 (lower is better) Translates to: LMVSSVLHFHQAHTR*TARHEGKTPINIKN Trigger: ATTTTTAATGTTTATGGGTGTTTTGCCTTCATGTCTGGCTGTGCATCGTGTGTGTGCTTGGTGGAAGTGGAGGACAGAAGAGACCATTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 90 bp | CCCTTGTCATCTGCATTTGCTTCTCAGTCAGAACTTCTTCTATACTaGAGAGGTACAGAGGGACATGATTCTGTCCTTTCTACTTGTCTC | + |
|
Preference number: 1 (lower is better) Translates to: PLSSAFASQSELLLY*RGTEGHDSVLSTCL Trigger: GAGACAAGTAGAAAGGACAGAATCATGTCCCTCTGTACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAAGCAAATGCAGATGACAAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 90 bp | ACTGACCTCATACATGTCTTCTCATTCTGGACTCCCCTTGTCATCTaGATTTGCTTCTCAGTCAGAACTTCTTCTATACTGCAGAGGTAC | + |
|
Preference number: 1 (lower is better) Translates to: TDLIHVFSFWTPLVI*ICFSVRTSSILQRY Trigger: GTACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAAGCAAATGCAGATGACAAGGGGAGTCCAGAATGAGAAGACATGTATGAGGTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 90 bp | CCTCAAGGCAATCAGAACTTCTTTCCAAAGATAACCACAGAATGGTaGCACATGGGAAACAAATCCCAGAAAGATATGGCCCAAACAGTC | + |
|
Preference number: 1 (lower is better) Translates to: PQGNQNFFPKITTEW*HMGNKSQKDMAQTV Trigger: GACTGTTTGGGCCATATCTTTCTGGGATTTGTTTCCCATGTGGCACCATTCTGTGGTTATCTTTGGAAAGAAGTTCTGATTGCCTTGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 90 bp | TCAGAAGTAAACAAGTGGGAGACCAGCTTCAGTAACACAGTGCCATaGTGGATCAGGAATAGAGAAAATGCTTCAGCGATTAAAAGCATG | + |
|
Preference number: 1 (lower is better) Translates to: SEVNKWETSFSNTVP*WIRNRENASAIKSM Trigger: CATGCTTTTAATCGCTGAAGCATTTTCTCTATTCCTGATCCAGCATGGCACTGTGTTACTGAAGCTGGTCTCCCACTTGTTTACTTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 90 bp | TTCTCAGTCAGAACTTCTTCTATACTGCAGAGGTACAGAGGGACATaGTTCTGTCCTTTCTACTTGTCTCTATCTGCCTCTTATTCCACA | + |
|
Preference number: 1 (lower is better) Translates to: FSVRTSSILQRYRGT*FCPFYLSLSASYST Trigger: TGTGGAATAAGAGGCAGATAGAGACAAGTAGAAAGGACAGAATCATGTCCCTCTGTACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 90 bp | CGCACACCTGTTCTCTACCGCATTTATAACCCACTCATTAATAATTaGCTTCAACCTAGGAGCTTTCAGAAGTTAGAATTCCCAGGCATA | + |
|
Preference number: 1 (lower is better) Translates to: RTPVLYRIYNPLINN*LQPRSFQKLEFPGI Trigger: TATGCCTGGGAATTCTAACTTCTGAAAGCTCCTAGGTTGAAGCCAATTATTAATGAGTGGGTTATAAATGCGGTAGAGAACAGGTGTGCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 90 bp | TATCCTCAAGGCAATCAGAACTTCTTTCCAAAGATAACCACAGAATaGTGCCACATGGGAAACAAATCCCAGAAAGATATGGCCCAAACA | + |
|
Preference number: 1 (lower is better) Translates to: YPQGNQNFFPKITTE*CHMGNKSQKDMAQT Trigger: TGTTTGGGCCATATCTTTCTGGGATTTGTTTCCCATGTGGCACCATTCTGTGGTTATCTTTGGAAAGAAGTTCTGATTGCCTTGAGGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 90 bp | CCACTTCCTTCTCACTATGCCACATGTATTTCTCTCATCATACACTaGAGTGAACAGTGCAACACCACCAAAAGGATCAATATTAAGAGC | + |
|
Preference number: 1 (lower is better) Translates to: PLPSHYATCISLIIH*SEQCNTTKRINIKS Trigger: GCTCTTAATATTGATCCTTTTGGTGGTGTTGCACTGTTCACTTCAGTGTATGATGAGAGAAATACATGTGGCATAGTGAGAAGGAAGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 90 bp | AAGATAATACATTTAGTATTGGACACACACCCTAGCACTGAAGAGTaGACCAAATATCTGACCTTAATTCCTCTCCTGAAAGCAGGAGCA | + |
|
Preference number: 1 (lower is better) Translates to: KIIHLVLDTHPSTEE*TKYLTLIPLLKAGA Trigger: TGCTCCTGCTTTCAGGAGAGGAATTAAGGTCAGATATTTGGTGCACTCTTCAGTGCTAGGGTGTGTGTCCAATACTAAATGTATTATCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 90 bp | CTACTGCCCAACCTGTTAATTCCTCCAAAGCTCAAGTACTGCCACTaGCCAAATTCCTTTGATCATCTTTCTATCAAAGACAAAGACTTT | + |
|
Preference number: 1 (lower is better) Translates to: LLPNLLIPPKLKYCH*PNSFDHLSIKDKDF Trigger: AAAGTCTTTGTCTTTGATAGAAAGATGATCAAAGGAATTTGGTCAGTGGCAGTACTTGAGCTTTGGAGGAATTAACAGGTTGGGCAGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 90 bp | AGCAGTAGTTTATTAGAACCCCATCTAACCTCTGAACCATGTCCATaGGCAAAAATTCTAAGAGCTTCTGCTTCCTATTTAACCAATAAG | + |
|
Preference number: 1 (lower is better) Translates to: SSSLLEPHLTSEPCP*AKILRASASYLTNK Trigger: CTTATTGGTTAAATAGGAAGCAGAAGCTCTTAGAATTTTTGCTCATGGACATGGTTCAGAGGTTAGATGGGGTTCTAATAAACTACTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 90 bp | ATGATCTTCCATACATACCTACCATGTGATATGTTCAGAAAGCTTTaGCAGCACACTCTCATTCTCGTTCTTCATAATAACCTGAGAATT | + |
|
Preference number: 1 (lower is better) Translates to: MIFHTYLPCDMFRKL*QHTLILVLHNNLRI Trigger: AATTCTCAGGTTATTATGAAGAACGAGAATGAGAGTGTGCTGGCAAAGCTTTCTGAACATATCACATGGTAGGTATGTATGGAAGATCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGTCCCGTCCAGCCCACACCCGCCTGGCTTTGCCAGGTCGGCAGGGCAGAAGGGAGCCAAGGGGAGGGTaGGGTGGAAGCATGGTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: QSRPAHTRLALPGRQGRREPRGG*GGSMVV Trigger: CACAACCATGCTTCCACCTCACCCTCCCCTTGGCTC...CCTTCTGCCCTGCCGACCTGGCAAAGCCAGGCGGGTGTGGGCTGGACGGGACTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CAA 90 bp | CATCTCGCCCAGGTTGGAGAACCTGCACCGCCTGTCGGGCCCTGGTaGGGCTGTGTGCATGCCGCAGGAGTAATTCCCCCAAGGATGGCC | + |
|
Preference number: 2 (lower is better) Translates to: HLAQVGEPAPPVGPW*GCVHAAGVIPPRMA Trigger: GGCCATCCTTGGGGGAATTACTCCTGCGGCATGCACACAGCCCAACCAGGGCCCGACAGGCGGTGCAGGTTCTCCAACCTGGGCGAGATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000137158.8 ENSMUST00000210448.2 ENSMUST00000211549.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCAGGGCTGGGCCTTCGACTAGGGCTGGAAGTTGGAGATGCAGTAAGCCCTGGGGTGGGCTAGGGGCATaGTGCCGGCAGCAGCGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: CRAGPSTRAGSWRCSKPWGGLGA*CRQQRG Trigger: ACCACGCTGCTGCCGGCACCATGCCCCTAGCCCACC...CCAGGGCTTACTGCATCTCCAACTTCCAGCCCTAGTCGAAGGCCCAGCCCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR CAA 90 bp | GGCGTGCTAGTGAAACAGTCCCGTCCAGCCCACACCCGCCTGGCTTaGCCAGGTCGGCAGGGCAGAAGGGCACTGAAATCAGTAGGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: GVLVKQSRPAHTRLA*PGRQGRRALKSVGL Trigger: CAGCCCTACTGATTTCAGTGCCCTTCTGCCCTGCCGACCTGGCAAAGCCAGGCGGGTGTGGGCTGGACGGGACTGTTTCACTAGCACGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR GCA 90 bp | CCCTGGTTGGGCTGTGTGCATGCCGCAGGAGTAATTCCCCCAAGGATGGCCTCCTCCCGGCGCAAGCAGTaGCAATCATCCCCCGGAACC | + |
|
Preference number: 2 (lower is better) Translates to: PWLGCVHAAGVIPPRMASSRRKQ*QSSPGT Trigger: GGTTCCGGGGGATGATTGGCACTGCTTGCGCCGGGA...GGAGGCCATCCTTGGGGGAATTACTCCTGCGGCATGCACACAGCCCAACCAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCAGGGCTGGGCCTTCGACTAGGGCTGGAAGTTGGAGATGCAGTAAGCCCTGGATGCTCTGGTCGAGGTaGGCTAGGGGCATGGTGCCG | + |
|
Preference number: 2 (lower is better) Translates to: CRAGPSTRAGSWRCSKPWMLWSR*ARGMVP Trigger: CGGCACCATGCCCCTAGCCCACCTCGACCAGAGCAT...CCAGGGCTTACTGCATCTCCAACTTCCAGCCCTAGTCGAAGGCCCAGCCCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR CAA 90 bp | GGACCCTCAGCCCAGTCCAGCTTGCCACGGGCAATGAGGTACTTCTaGGCTTTGGATAGCAGAGCAGGGAAGTCCTCCTGGGAGGCCGCA | + |
|
Preference number: 2 (lower is better) Translates to: GPSAQSSLPRAMRYF*ALDSRAGKSSWEAA Trigger: TGCGGCCTCCCAGGAGGACTTCCCTGCTCTGCTATCCAAAGCCAAGAAGTACCTCATTGCCCGTGGCAAGCTGGACTGGGCTGAGGGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000137158.8 ENSMUST00000210448.2 ENSMUST00000211549.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCCTGGAGAGCCCCCACCTAGTCCAAGTCCTGTTCCATCTCGCCCAGGTTGGAGTTGGGCTGTGTGCATaGCGCAGGAGTAATTCCCCC | + |
|
Preference number: 2 (lower is better) Translates to: PLESPHLVQVLFHLAQVGVGLCA*RRSNSP Trigger: GGGGGAATTACTCCTGCGGCATGCACACAGCCCAAC...TCCAACCTGGGCGAGATGGAACAGGACTTGGACTAGGTGGGGGCTCTCCAGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000137158.8 ENSMUST00000210448.2 ENSMUST00000211549.2 |
||
| 3UTR CAA 90 bp | GGAGGTAGTGGAGGCTCTAAGGGAGGCTCTGAGCCAGCTCCACCATaGCTCAATGCCACCTCCAGCTCCTGGAGCTCTTGCCCAAAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: GGSGGSKGGSEPAPP*LNATSSSWSSCPKL Trigger: GAGCTTTGGGCAAGAGCTCCAGGAGCTGGAGGTGGCATTGAGCAATGGTGGAGCTGGCTCAGAGCCTCCCTTAGAGCCTCCACTACCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR-3UTR CCA 90 bp | CATGCCGCAGGAGTAATTCCCCCAAGGATGGCCTCCGGCTCCTCACTAGGGAATGCAGGGAAGTCCTCCTaGGAGGCCGCAAAGCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: HAAGVIPPRMASGSSLGNAGKSS*EAAKLS Trigger: TGAGAGCTTTGCGGCCTCCCAGGAGGACTTCCCTGC...ATTCCCTAGTGAGGAGCCGGAGGCCATCCTTGGGGGAATTACTCCTGCGGCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000137158.8 ENSMUST00000210448.2 ENSMUST00000211549.2 |
||
| 3UTR CAA 90 bp | TCAGCCCAGTCCAGCTTGCCACGGGCAATGAGGTACTTCTTGGCTTaGGATAGCAGAGCAGGGAAGTCCTCCTGGGAGGCCGCAAAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: SAQSSLPRAMRYFLA*DSRAGKSSWEAAKL Trigger: GAGCTTTGCGGCCTCCCAGGAGGACTTCCCTGCTCTGCTATCCAAAGCCAAGAAGTACCTCATTGCCCGTGGCAAGCTGGACTGGGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000137158.8 ENSMUST00000210448.2 ENSMUST00000211549.2 |
||
| 3UTR CAA 90 bp | GTCATCTACCAGGTCTTCTCCTGCACCTGGCTGCAGCTAGGGCTTTaGCCTACAGCCCGTGAACCCCAGCTGATCCGGTTACAGCGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: VIYQVFSCTWLQLGL*PTAREPQLIRLQRS Trigger: TGACCGCTGTAACCGGATCAGCTGGGGTTCACGGGCTGTAGGCAAAAGCCCTAGCTGCAGCCAGGTGCAGGAGAAGACCTGGTAGATGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR TCA 90 bp | GTCCAAGTCCTGTTCCATCTCGCCCAGGTTGGAGAACCTGCACCGCCTGTCGGGACTCAAGGGAACTCATaGAGAGTGCAAGGGCAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: VQVLFHLAQVGEPAPPVGTQGNS*RVQGQA Trigger: TGCCTGCCCTTGCACTCTTCATGAGTTCCCTTGAGT...CCCGACAGGCGGTGCAGGTTCTCCAACCTGGGCGAGATGGAACAGGACTTGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR-3UTR GCA 90 bp | CGGGCCCTGGTTGGGCTGTGTGCATGCCGCAGGAGTAATTCCCCCAAGGATGGCGGAACTCATGAAGAGTaGAAGGGCAGGCACTCCTAT | + |
|
Preference number: 2 (lower is better) Translates to: RALVGLCACRRSNSPKDGGTHEE*KGRHSY Trigger: ATAGGAGTGCCTGCCCTTGCACTCTTCATGAGTTCC...GCCATCCTTGGGGGAATTACTCCTGCGGCATGCACACAGCCCAACCAGGGCCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR-3UTR GCA 90 bp | CATGCCGCAGGAGTAATTCCCCCAAGGATGGCCTCCGGCTCCTCACTAGGGAATACAGAGCCCAGCACCTaGAGCAGGGACTTGACACTG | + |
|
Preference number: 2 (lower is better) Translates to: HAAGVIPPRMASGSSLGNTEPST*SRDLTL Trigger: CAGTGTCAAGTCCCTGCTGCAGGTGCTGGGCTCTGT...ATTCCCTAGTGAGGAGCCGGAGGCCATCCTTGGGGGAATTACTCCTGCGGCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000137158.8 ENSMUST00000211549.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGCAGGTGAGCCTACAACAGAATCTTCCCTGGCTCCGAAGCACCCACAGCATCTGCAGCCCAAGGGTGTaGTGGGACCACAGAAGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: GQVSLQQNLPWLRSTHSICSPRV*WDHRSL Trigger: GAGACTTCTGTGGTCCCAGCACACCCTTGGGCTGCA...GATGCTGTGGGTGCTTCGGAGCCAGGGAAGATTCTGTTGTAGGCTCACCTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CAA 90 bp | CTAACTCCTTCCTGTGGTACCAATCGTGGCACCAGACGAACCTTCTaGGCTCCTTCTGGCCATGGCCCTGGTACCCCATTGAGCTGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: LTPSCGTNRGTRRTF*APSGHGPGTPLSWG Trigger: ACCCCAGCTCAATGGGGTACCAGGGCCATGGCCAGAAGGAGCCAAGAAGGTTCGTCTGGTGCCACGATTGGTACCACAGGAAGGAGTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGCAGGTGAGCCTACAACAGAATCTTCCCTGGCTCCGAAGCACCCACAGCATCGCCTCAAGTTTTCACTaGAGCCCAAGGGTGTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GQVSLQQNLPWLRSTHSIASSFH*SPRVCW Trigger: CCAGCACACCCTTGGGCTGCAGTGAAAACTTGAGGC...GATGCTGTGGGTGCTTCGGAGCCAGGGAAGATTCTGTTGTAGGCTCACCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CAA 90 bp | CCCAAGGGTGTGCTGGGACCACAGAAGTCTCTGACCAAAGACCCATaGCCCCAAGGAGCCAACTGGGTTAGACCTAGCCTTAGCATCATA | + |
|
Preference number: 2 (lower is better) Translates to: PKGVLGPQKSLTKDP*PQGANWVRPSLSII Trigger: TATGATGCTAAGGCTAGGTCTAACCCAGTTGGCTCCTTGGGGCAATGGGTCTTTGGTCAGAGACTTCTGTGGTCCCAGCACACCCTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR CCA 90 bp | CCCTTGTCATCTGCATTTGCTTCTCAGTCAGAACTTCTTCTATACTGCAGAGGTCAGCCCACACCCGCCTaGCTTTGCCAGGTCGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: PLSSAFASQSELLLYCRGQPTPA*LCQVGR Trigger: CCTGCCGACCTGGCAAAGCCAGGCGGGTGTGGGCTG...ACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAAGCAAATGCAGATGACAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CAA 90 bp | TCCCTGGTAATTTATAGGCTGAGAATCCCTGGGATGATGATGATGTaGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: SLVIYRLRIPGMMMM*LLLLLLLLLLLLLL Trigger: CAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACATCATCATCATCCCAGGGATTCTCAGCCTATAAATTACCAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR GCA 90 bp | GCAGTACCTTTCCTGTCGGATGCAGCCTACTATGATCTACTGGGCGTGCTAGTGAGAAAGTTGCTTTCCTaGTGCTACCACCAGGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: AVPFLSDAAYYDLLGVLVRKLLS*CYHQGR Trigger: CCTGCCCTGGTGGTAGCAGCAGGAAAGCAACTTTCT...CACTAGCACGCCCAGTAGATCATAGTAGGCTGCATCCGACAGGAAAGGTACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTACCTTTCCTGTCGGATGCAGCCTACTATGATCTACTGGGCGTGCTAGTGGGAATACTCACCAAATaGCCGAGCCGAGACAGCCTA | + |
|
Preference number: 2 (lower is better) Translates to: AVPFLSDAAYYDLLGVLVGILTK*PSRDSL Trigger: TAGGCTGTCTCGGCTCGGCCATTTGGTGAGTATTCC...CACTAGCACGCCCAGTAGATCATAGTAGGCTGCATCCGACAGGAAAGGTACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR GCA 90 bp | CAGCTGAGGTTCAGAAGGGTCCTGAAGAGACTCAGAGAGACCATGCAGAGCCGGAGCTACCTGAATGACTaGATTGCAGAACTCAAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: QLRFRRVLKRLRETMQSRSYLND*IAELKG Trigger: TCCCTTGAGTTCTGCAATGCAGTCATTCAGGTAGCT...CCGGCTCTGCATGGTCTCTCTGAGTCTCTTCAGGACCCTTCTGAACCTCAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGAGACGAAAGAAGAGAGCGTCTTTGTGCTGTTTAAAGACAGGGCAGGGCAGATGGTTGTGGTAAGGTaGCGGGATGGGGGTGTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: GETKEESVFVLFKDRAGQMVVVR*RDGGVV Trigger: TACAACACCCCCATCCCGCCACCTTACCACAACCAT...CTGCCCTGCCCTGTCTTTAAACAGCACAAAGACGCTCTCTTCTTTCGTCTCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR GCA 90 bp | GGAGAGACGAAAGAAGAGAGCGTCTTTGTGCTGTTTAAAGACAGGGCAGGGCAGCAGGGCACCTCTGAGTaGCCTGATTTCTTTCTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: GETKEESVFVLFKDRAGQQGTSE*PDFFLS Trigger: TGAAAGAAAGAAATCAGGGCACTCAGAGGTGCCCTG...CTGCCCTGCCCTGTCTTTAAACAGCACAAAGACGCTCTCTTCTTTCGTCTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR CCA 90 bp | CCCTTGTCATCTGCATTTGCTTCTCAGTCAGAACTTCTTCTATACTGCAGAGGTACCCTAGCAGAGAACTaGCTCTTCAGCCCCCGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: PLSSAFASQSELLLYCRGTLAEN*LFSPRN Trigger: GTTGCGGGGGCTGAAGAGCCAGTTCTCTGCTAGGGT...ACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAAGCAAATGCAGATGACAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR TCA 90 bp | CCCTTGTCATCTGCATTTGCTTCTCAGTCAGAACTTCTTCTATACTGCAGAGGTTGTACAGGACCTTCATaGAGGAGCCAAGGGGAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: PLSSAFASQSELLLYCRGCTGPS*RSQGEG Trigger: ACCCTCCCCTTGGCTCCTTCATGAAGGTCCTGTACA...ACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAAGCAAATGCAGATGACAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR TCA 90 bp | CCCTTGTCATCTGCATTTGCTTCTCAGTCAGAACTTCTTCTATACTGCAGAGGTGACCACAGAAGTCTCTaGCCAAAGACCCATTGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: PLSSAFASQSELLLYCRGDHRSL*PKTHCP Trigger: GGGGCAATGGGTCTTTGGTCAGAGACTTCTGTGGTC...ACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAAGCAAATGCAGATGACAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGACCAACTGCACTGCCTTTTGGACAGTTTTCCTGATAACACTTTCCTATCAGCCTGCTAACACTGGATaGAGCAGATGCCACTTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: ETNCTAFWTVFLITLSYQPANTG*SRCHLG Trigger: GCCCAAGTGGCATCTGCTTCATCCAGTGTTAGCAGG...CTGATAGGAAAGTGTTATCAGGAAAACTGTCCAAAAGGCAGTGCAGTTGGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR GCA 90 bp | TGTCATCTGCATTTGCTTCTCAGTCAGAACTTCTTCTATACTGCAGAGGTACAGGGCACTCCATGTCCCTaGCCCTGCTTCAGGGTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: CHLHLLLSQNFFYTAEVQGTPCP*PCFRVC Trigger: ACAAACCCTGAAGCAGGGGCAGGGACATGGAGTGCC...CTGTACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAAGCAAATGCAGATGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR GCA 90 bp | TCATCTAAGATAATACATTTAGTATTGGACACACACCCTAGCACTGAAGAGTGCTACCAGGTCTTCTCCTaGACCTGGCTGCAGCTAGGG | + |
|
Preference number: 2 (lower is better) Translates to: SSKIIHLVLDTHPSTEECYQVFS*TWLQLG Trigger: CCCTAGCTGCAGCCAGGTGCAGGAGAAGACCTGGTA...GCACTCTTCAGTGCTAGGGTGTGTGTCCAATACTAAATGTATTATCTTAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR GCA 90 bp | TACTTAACTACTATTCACATTTTTGTTCCGTCCATTAGCCCAAGCTACATTGGTCCATGTCCCTGCCCCTaGTTCAGGGTTTGTCTTCGG | + |
|
Preference number: 2 (lower is better) Translates to: YLTTIHIFVPSISPSYIGPCPCP*FRVCLR Trigger: CCGAAGACAAACCCTGAAGCAGGGGCAGGGACATGG...ACCAATGTAGCTTGGGCTAATGGACGGAACAAAAATGTGAATAGTAGTTAAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR GCA 90 bp | TGTCATCTGCATTTGCTTCTCAGTCAGAACTTCTTCTATACTGCAGAGGTACAGGGTATCTTTGCCCACTaGACACGGGAATACTCACCA | + |
|
Preference number: 2 (lower is better) Translates to: CHLHLLLSQNFFYTAEVQGIFAH*TREYSP Trigger: TGGTGAGTATTCCCGTGTGCAGTGGGCAAAGATACC...CTGTACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAAGCAAATGCAGATGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR CCA 90 bp | TCATCTAAGATAATACATTTAGTATTGGACACACACCCTAGCACTGAAGAGTGCGGTAAGGTGGCGGGATaGGGGTGTTGTAGCACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: SSKIIHLVLDTHPSTEECGKVAG*GCCSTK Trigger: CTTTGTGCTACAACACCCCCATCCCGCCACCTTACC...GCACTCTTCAGTGCTAGGGTGTGTGTCCAATACTAAATGTATTATCTTAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR CCA 90 bp | TACTTAACTACTATTCACATTTTTGTTCCGTCCATTAGCCCAAGCTACATTGGTCAACAGAATCTTCCCTaGCTCCGAAGCACCCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: YLTTIHIFVPSISPSYIGQQNLP*LRSTHS Trigger: GCTGTGGGTGCTTCGGAGCCAGGGAAGATTCTGTTG...ACCAATGTAGCTTGGGCTAATGGACGGAACAAAAATGTGAATAGTAGTTAAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTCATCTGCATTTGCTTCTCAGTCAGAACTTCTTCTATACTGCAGAGGTACAGATCAAAATTGCTTTCTaGGGGGAACAGAGTTGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: CHLHLLLSQNFFYTAEVQIKIAF*GEQSCQ Trigger: TTGGCAACTCTGTTCCCCCCAGAAAGCAATTTTGAT...CTGTACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAAGCAAATGCAGATGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGACCAACTGCACTGCCTTTTGGACAGTTTTCCTGATAACACTTTCCTATCAGCCACTCATTAATAATTaGCTTCAACCTAGGAGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: ETNCTAFWTVFLITLSYQPLINN*LQPRSF Trigger: AAAGCTCCTAGGTTGAAGCCAATTATTAATGAGTGG...CTGATAGGAAAGTGTTATCAGGAAAACTGTCCAAAAGGCAGTGCAGTTGGTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CAA 90 bp | ACCAAGAAATATCTAAAAGGATCATCTAAGATAATACATTTAGTATaGGACACACACCCTAGCACTGAAGAGTGCACCAAATATCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: TKKYLKGSSKIIHLV*DTHPSTEECTKYLT Trigger: GGTCAGATATTTGGTGCACTCTTCAGTGCTAGGGTGTGTGTCCAATACTAAATGTATTATCTTAGATGATCCTTTTAGATATTTCTTGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 72 bp | GCCTCTCTGCTAGGCCCACCTCGTGCCCATGAGGCATaGTCTGGTCGAGGTGGGCTAGGGGCATGGTGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: ASLLGPPRAHEA*SGRGGLGAWCR Trigger: CCGGCACCATGCCCCTAGCCCACCTCGACCAGAGCATGCCTCATGGGCACGAGGTGGGCCTAGCAGAGAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR GCA 72 bp | TGCACCGCCTGTCGGGCCCTGGTTGGGCTGTGTGCATaGCGCAGGAGTAATTCCCCCAAGGATGGCCTCCGG | + |
|
Preference number: 3 (lower is better) Translates to: CTACRALVGLCA*RRSNSPKDGLR Trigger: CCGGAGGCCATCCTTGGGGGAATTACTCCTGCGGCATGCACACAGCCCAACCAGGGCCCGACAGGCGGTGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000137158.8 ENSMUST00000210448.2 ENSMUST00000211549.2 |
||
| 3UTR CCA 72 bp | GCCCAGGTTGGAGAACCTGCACCGCCTGTCGGGCCCTaGTTGGGCTGTGTGCATGCCGCAGGAGTAATTCCC | + |
|
Preference number: 3 (lower is better) Translates to: AQVGEPAPPVGP*LGCVHAAGVIP Trigger: GGGAATTACTCCTGCGGCATGCACACAGCCCAACCAGGGCCCGACAGGCGGTGCAGGTTCTCCAACCTGGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000137158.8 ENSMUST00000210448.2 ENSMUST00000211549.2 |
||
| 3UTR GCA 72 bp | CCAAGTCCTGTTCCATCTCGCCCAGGTTGGAGAACCTaGACCGCCTGTCGGGCCCTGGTTGGGCTGTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PSPVPSRPGWRT*TACRALVGLCA Trigger: TGCACACAGCCCAACCAGGGCCCGACAGGCGGTGCAGGTTCTCCAACCTGGGCGAGATGGAACAGGACTTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000137158.8 ENSMUST00000210448.2 ENSMUST00000211549.2 |
||
| 3UTR CCA 72 bp | CCACCTAGTCCAAGTCCTGTTCCATCTCGCCCAGGTTaGAGAACCTGCACCGCCTGTCGGGCCCTGGTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PPSPSPVPSRPG*RTCTACRALVG Trigger: CCCAACCAGGGCCCGACAGGCGGTGCAGGTTCTCCAACCTGGGCGAGATGGAACAGGACTTGGACTAGGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000137158.8 ENSMUST00000210448.2 ENSMUST00000211549.2 |
||
| 3UTR GCA 72 bp | GAGGCATGCTCTGGTCGAGGTGGGCTAGGGGCATGGTaGCGGCAGCAGCGTGGTATTAGGGAGAGAAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: EACSGRGGLGAW*RQQRGIRERNL Trigger: CAAGTTTCTCTCCCTAATACCACGCTGCTGCCGGCACCATGCCCCTAGCCCACCTCGACCAGAGCATGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR CCA 72 bp | CATGAGGCATGCTCTGGTCGAGGTGGGCTAGGGGCATaGTGCCGGCAGCAGCGTGGTATTAGGGAGAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: HEACSGRGGLGA*CRQQRGIRERN Trigger: GTTTCTCTCCCTAATACCACGCTGCTGCCGGCACCATGCCCCTAGCCCACCTCGACCAGAGCATGCCTCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR CCA 72 bp | CAGGACCTTCATGAAGGAGCCAAGGGGAGGGTGAGGTaGAAGCATGGTTGTGGTAAGGTGGCGGGATGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: QDLHEGAKGRVR*KHGCGKVAGWG Trigger: CCCCCATCCCGCCACCTTACCACAACCATGCTTCCACCTCACCCTCCCCTTGGCTCCTTCATGAAGGTCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 72 bp | GCAGGCACTCCTATCCAGTCTTCCCGGCGCAAGCAGTaGCAATCATCCCCCGGAACCTCAATCTTTCGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: AGTPIQSSRRKQ*QSSPGTSIFRG Trigger: GCCTCGAAAGATTGAGGTTCCGGGGGATGATTGGCACTGCTTGCGCCGGGAAGACTGGATAGGAGTGCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR TCA 72 bp | ACTAGGGCTGGAAGTTGGAGATGCAGTAAGCCCTGGTaGTCGAGGAACTGGACCTGGGGACTCAGAGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: TRAGSWRCSKPW*SRNWTWGLRAT Trigger: GGTGGCTCTGAGTCCCCAGGTCCAGTTCCTCGATCACCAGGGCTTACTGCATCTCCAACTTCCAGCCCTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR GCA 72 bp | CCATTGCTCAATGCCACCTCCAGCTCCTGGAGCTCTTaGCCAAAGCTCTCTAGTCCTGCCATGTCCTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PLLNATSSSWSS*PKLSSPAMSSE Trigger: CTCTGAGGACATGGCAGGACTAGAGAGCTTTGGGCAAGAGCTCCAGGAGCTGGAGGTGGCATTGAGCAATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR GCA 72 bp | ACCCACAGCATCTACGTCATCTACCAGGTCTTCTCCTaGACCTGGCTGCAGCTAGGGCTTTTGCCTACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: THSIYVIYQVFS*TWLQLGLLPTA Trigger: GGCTGTAGGCAAAAGCCCTAGCTGCAGCCAGGTGCAGGAGAAGACCTGGTAGATGACGTAGATGCTGTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 72 bp | GGCAGCCCTGCAGGATTCGCCTACATATGGGAGGTCTaGGCAAGAAAGTTGCTTTCCTGCTGCTACCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: GSPAGFAYIWEV*ARKLLSCCYHQ Trigger: CTGGTGGTAGCAGCAGGAAAGCAACTTTCTTGCGCAGACCTCCCATATGTAGGCGAATCCTGCAGGGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 72 bp | CTAGAACAGGCAGGGTCTGAGGGTATCTTTGCCCACTaGACACGGGAATACTCACCAAATGGCCGAGCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: LEQAGSEGIFAH*TREYSPNGRAE Trigger: CTCGGCTCGGCCATTTGGTGAGTATTCCCGTGTGCAGTGGGCAAAGATACCCTCAGACCCTGCCTGTTCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 72 bp | CCACCAGGGCAGGTGAGCCTACAACAGAATCTTCCCTaGCTCCGAAGCACCCACAGCATCTACGTCATCTAC | + |
|
Preference number: 3 (lower is better) Translates to: PPGQVSLQQNLP*LRSTHSIYVIY Trigger: GTAGATGACGTAGATGCTGTGGGTGCTTCGGAGCCAGGGAAGATTCTGTTGTAGGCTCACCTGCCCTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGCAGGTGAGCCTACAACAGAATCTTCCCTGGCTCCGAAGCACCCACAGCATCTCAGCAGCCCAGAGTTaGTACAGGACCTTCATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GQVSLQQNLPWLRSTHSISAAQS*YRTFMK Trigger: CTTCATGAAGGTCCTGTACAAACTCTGGGCTGCTGA...GATGCTGTGGGTGCTTCGGAGCCAGGGAAGATTCTGTTGTAGGCTCACCTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 72 bp | TTGTACAGGACCTTCATGAAGGAGCCAAGGGGAGGGTaGGGTGGAAGCATGGTTGTGGTAAGGTGGCGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LYRTFMKEPRGG*GGSMVVVRWRD Trigger: ATCCCGCCACCTTACCACAACCATGCTTCCACCTCACCCTCCCCTTGGCTCCTTCATGAAGGTCCTGTACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 72 bp | CGGGCAACGAGCGTGTCAAGGATGGTGTGGGTATCATaGCGATGTAACAACAGGAATCGCAGGAAGGTACGG | + |
|
Preference number: 3 (lower is better) Translates to: RATSVSRMVWVS*RCNNRNRRKVR Trigger: CCGTACCTTCCTGCGATTCCTGTTGTTACATCGGCATGATACCCACACCATCCTTGACACGCTCGTTGCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR CCA 72 bp | TCTGTTGCCGAAGAAACAGAGCCAGACGAGATGGTGTaGAGGGGCGGGGCACTGTTACCACTGACGAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SVAEETEPDEMV*RGGALLPLTKN Trigger: ATTCTTCGTCAGTGGTAACAGTGCCCCGCCCCTCCACACCATCTCGTCTGGCTCTGTTTCTTCGGCAACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR CCA 72 bp | AGCATCTACGTCATCTACCAGGTCTTCTCCTGCACCTaGCTGCAGCTAGGGCTTTTGCCTACAGCCCGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SIYVIYQVFSCT*LQLGLLPTARE Trigger: TTCACGGGCTGTAGGCAAAAGCCCTAGCTGCAGCCAGGTGCAGGAGAAGACCTGGTAGATGACGTAGATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 72 bp | ATACCTCCTCTGAAGTATCCAACAAGAAAGGCGAGGTaGCAGCATGGGCCTGGGAGATGGCAGCCAACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: IPPLKYPTRKAR*QHGPGRWQPTP Trigger: AGGAGTTGGCTGCCATCTCCCAGGCCCATGCTGTCACCTCGCCTTTCTTGTTGGATACTTCAGAGGAGGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137158.8 ENSMUST00000211549.2 |
||
| 3UTR TCA 72 bp | AGAAAGTTGCTTTCCTGCTGCTACCACCAGGGCAGGTaGGCCTACAACAGAATCTTCCCTGGCTCCGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RKLLSCCYHQGR*AYNRIFPGSEA Trigger: TGCTTCGGAGCCAGGGAAGATTCTGTTGTAGGCTCACCTGCCCTGGTGGTAGCAGCAGGAAAGCAACTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 72 bp | ATGGCCGAGCCGAGACAGCCTATGAAGAAATGCGAATaGTGGATGGGCAGCCCTGCAGGATTCGCCTACATA | + |
|
Preference number: 3 (lower is better) Translates to: MAEPRQPMKKCE*WMGSPAGFAYI Trigger: TATGTAGGCGAATCCTGCAGGGCTGCCCATCCATCATTCGCATTTCTTCATAGGCTGTCTCGGCTCGGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 72 bp | GGAATACTCACCAAATGGCCGAGCCGAGACAGCCTATaGAGAAATGCGAATGATGGATGGGCAGCCCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GILTKWPSRDSL*RNANDGWAALQ Trigger: CTGCAGGGCTGCCCATCCATCATTCGCATTTCTTCATAGGCTGTCTCGGCTCGGCCATTTGGTGAGTATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 72 bp | AGTGGCAGTACCTTTCCTGTCGGATGCAGCCTACTATaGTCTACTGGGCGTGCTAGTGAAACAGTCCCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SGSTFPVGCSLL*STGRASETVPS Trigger: GGACGGGACTGTTTCACTAGCACGCCCAGTAGATCATAGTAGGCTGCATCCGACAGGAAAGGTACTGCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 72 bp | GCCTATGAAGAAATGCGAATGATGGATGGGCAGCCCTaGAGGATTCGCCTACATATGGGAGGTCTGCGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: AYEEMRMMDGQP*RIRLHMGGLRK Trigger: CTTGCGCAGACCTCCCATATGTAGGCGAATCCTGCAGGGCTGCCCATCCATCATTCGCATTTCTTCATAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 72 bp | AAGGCTCTATCACCTATTAGGGCCTCTATGACCTCATaGTGGAGTAGGTCACAGCCCAAAGTAGGCGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: KALSPIRASMTS*WSRSQPKVGGP Trigger: AGGCCCGCCTACTTTGGGCTGTGACCTACTCCAGCATGAGGTCATAGAGGCCCTAATAGGTGATAGAGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 72 bp | CTGCCAATACGGGCAACGAGCGTGTCAAGGATGGTGTaGGTATCATGCCGATGTAACAACAGGAATCGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LPIRATSVSRMV*VSCRCNNRNRR Trigger: CCTGCGATTCCTGTTGTTACATCGGCATGATACCCACACCATCCTTGACACGCTCGTTGCCCGTATTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR CCA 72 bp | TGCCGTGCATTAGTACTGGCTGAGGAGACGGGCCTTTaGCTTGAGACCAACTGCACTGCCTTTTGGACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: CRALVLAEETGL*LETNCTAFWTV Trigger: AACTGTCCAAAAGGCAGTGCAGTTGGTCTCAAGCCAAAGGCCCGTCTCCTCAGCCAGTACTAATGCACGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAGACGAAAGAAGAGAGCGTCTTTGTGCTGTTTAAAGACAGGGCAGGGCAGTCAGCTCTCTTCTCCTaGGTCCCATCCTCCCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: GETKEESVFVLFKDRAGQSALFS*VPSSHH Trigger: ATGGTGGGAGGATGGGACCAAGGAGAAGAGAGCTGA...CTGCCCTGCCCTGTCTTTAAACAGCACAAAGACGCTCTCTTCTTTCGTCTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 72 bp | AGGGCTGCTACCAAATCTTCTAGAACAGGCAGGGTCTaGGGGTATCTTTGCCCACTGCACACGGGAATACTC | + |
|
Preference number: 3 (lower is better) Translates to: RAATKSSRTGRV*GYLCPLHTGIL Trigger: GAGTATTCCCGTGTGCAGTGGGCAAAGATACCCTCAGACCCTGCCTGTTCTAGAAGATTTGGTAGCAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 72 bp | TTCCTCTCCCGAAGCAATATAATGACCACTCCAGGCTaGGGCAGAAGACCACGAGACCATGAGGCAAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: FLSRSNIMTTPG*GRRPRDHEARL Trigger: CAGTCTTGCCTCATGGTCTCGTGGTCTTCTGCCTCAGCCTGGAGTGGTCATTATATTGCTTCGGGAGAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 72 bp | TCTGTGTGGCATGCACGTACCACTTCAAGCTGGCTCTaGGTACAGCCAGCTTTGCAGGACAGCATTTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SVWHARTTSSWL*VQPALQDSISL Trigger: GAGAGAAATGCTGTCCTGCAAAGCTGGCTGTACTCAGAGCCAGCTTGAAGTGGTACGTGCATGCCACACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 72 bp | ATCCGGTTACAGCGGTCACTACCTATTGCTTTCTCCTaGCTCAAGTTTTCACTGCAGCCCAAGGGTGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: IRLQRSLPIAFS*LKFSLQPKGVL Trigger: CAGCACACCCTTGGGCTGCAGTGAAAACTTGAGGCAGGAGAAAGCAATAGGTAGTGACCGCTGTAACCGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 72 bp | ACCCCAGCTGATCCGGTTACAGCGGTCACTACCTATTaGTTTCTCCTGCCTCAAGTTTTCACTGCAGCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TPADPVTAVTTY*FLLPQVFTAAQ Trigger: TTGGGCTGCAGTGAAAACTTGAGGCAGGAGAAAGCAATAGGTAGTGACCGCTGTAACCGGATCAGCTGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 72 bp | TCAGCGATTAAAAGCATGGACAGCTCTTCCAGAGGATaGGGGTTCAGTTCCCAATACCCACATGGCGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SAIKSMDSSSRG*GFSSQYPHGGS Trigger: TGAGCCGCCATGTGGGTATTGGGAACTGAACCCTCATCCTCTGGAAGAGCTGTCCATGCTTTTAATCGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 72 bp | AGTTGCTGCCAATACGGGCAACGAGCGTGTCAAGGATaGTGTGGGTATCATGCCGATGTAACAACAGGAATC | + |
|
Preference number: 3 (lower is better) Translates to: SCCQYGQRACQG*CGYHADVTTGI Trigger: GATTCCTGTTGTTACATCGGCATGATACCCACACCATCCTTGACACGCTCGTTGCCCGTATTGGCAGCAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR CCA 72 bp | ACATCACGCACAGCTGGCTTCTGGCTTAGCATCACATaGTTACATGGGACAAGATACCTGAGAACCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TSRTAGFWLSIT*LHGTRYLRTSC Trigger: GCAGCTGGTTCTCAGGTATCTTGTCCCATGTAACCATGTGATGCTAAGCCAGAAGCCAGCTGTGCGTGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR CCA 72 bp | CCCCACCTGCTAACACTGGATGAAGCAGATGCCACTTaGGCCCTCATCAAGGATAAGGTAGGTAAAGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PHLLTLDEADAT*ALIKDKVGKVR Trigger: TCTCACTTTACCTACCTTATCCTTGATGAGGGCCCAAGTGGCATCTGCTTCATCCAGTGTTAGCAGGTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 72 bp | ATGTGCCAACTTCAAGCAGAACAGGGCACCTCTGAGTaGCCTGATTTCTTTCTTTCAATACAACAGGCCGGC | + |
|
Preference number: 3 (lower is better) Translates to: MCQLQAEQGTSE*PDFFLSIQQAG Trigger: GCCGGCCTGTTGTATTGAAAGAAAGAAATCAGGGCACTCAGAGGTGCCCTGTTCTGCTTGAAGTTGGCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 72 bp | AGAGAAGAGGAGAGACGAAAGAAGAGAGCGTCTTTGTaGTGTTTAAAGACAGGGCAGGGCAGGGCAAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: REEERRKKRASL*CLKTGQGRART Trigger: TGTTCTTGCCCTGCCCTGCCCTGTCTTTAAACAGCACAAAGACGCTCTCTTCTTTCGTCTCTCCTCTTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 72 bp | GTACCACTTCAAGCTGGCTCTGAGTACAGCCAGCTTTaGAGGACAGCATTTCTCTCTAGCTCAAGCTGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: VPLQAGSEYSQL*RTAFLSSSSCK Trigger: CTTACAGCTTGAGCTAGAGAGAAATGCTGTCCTGCAAAGCTGGCTGTACTCAGAGCCAGCTTGAAGTGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 72 bp | CCTGAGGTTTCTCACTTGGACTGTTGTGGCTTCTCTTaGATCCTGTCCACTTCCTTCTCACTATGCCACATG | + |
|
Preference number: 3 (lower is better) Translates to: PEVSHLDCCGFS*ILSTSFSLCHM Trigger: CATGTGGCATAGTGAGAAGGAAGTGGACAGGATGCAAGAGAAGCCACAACAGTCCAAGTGAGAAACCTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 72 bp | TCTTCTGTCCTCCACTTCCACCAAGCACACACACGATaGACAGCCAGACATGAAGGCAAAACACCCATAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SSVLHFHQAHTR*TARHEGKTPIN Trigger: GTTTATGGGTGTTTTGCCTTCATGTCTGGCTGTGCATCGTGTGTGTGCTTGGTGGAAGTGGAGGACAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 72 bp | TCTCTGACCAAAGACCCATTGCCCCAAGGAGCCAACTaGGTTAGACCTAGCCTTAGCATCATATCAACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLTKDPLPQGAN*VRPSLSIISTL Trigger: CAGAGTTGATATGATGCTAAGGCTAGGTCTAACCCAGTTGGCTCCTTGGGGCAATGGGTCTTTGGTCAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGACCAACTGCACTGCCTTTTGGACAGTTTTCCTGATAACACTTTCCTATCAGGGGATGATGATGATGTaGCTGCTGCTGCTGCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ETNCTAFWTVFLITLSYQGMMMM*LLLLLL Trigger: CAGCAGCAGCAGCAGCAGCAACATCATCATCATCCC...CTGATAGGAAAGTGTTATCAGGAAAACTGTCCAAAAGGCAGTGCAGTTGGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 72 bp | ACTGGGTTAGACCTAGCCTTAGCATCATATCAACTCTaGCCCCCACATCAGTATCTGCTGATACCCATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TGLDLALASYQL*PPHQYLLIPMK Trigger: CTTCATGGGTATCAGCAGATACTGATGTGGGGGCCAGAGTTGATATGATGCTAAGGCTAGGTCTAACCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR CAA 90 bp | TCATCTAAGATAATACATTTAGTATTGGACACACACCCTAGCACTGAAGAGTGCCTGCAGCTAGGGCTTTaGCCTACAGCCCGTGAACCC | + |
|
Preference number: 3 (lower is better) Translates to: SSKIIHLVLDTHPSTEECLQLGL*PTAREP Trigger: GGGTTCACGGGCTGTAGGCAAAAGCCCTAGCTGCAG...GCACTCTTCAGTGCTAGGGTGTGTGTCCAATACTAAATGTATTATCTTAGATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTCATCTGCATTTGCTTCTCAGTCAGAACTTCTTCTATACTGCAGAGGTACAGCTGTTGTGGCTTCTCTaGCATCCTGTCCACTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: CHLHLLLSQNFFYTAEVQLLWLL*HPVHFL Trigger: AAGGAAGTGGACAGGATGCAAGAGAAGCCACAACAG...CTGTACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAAGCAAATGCAGATGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 72 bp | AACAAGTGGGAGACCAGCTTCAGTAACACAGTGCCATaGTGGATCAGGAATAGAGAAAATGCTTCAGCGATT | + |
|
Preference number: 3 (lower is better) Translates to: NKWETSFSNTVP*WIRNRENASAI Trigger: AATCGCTGAAGCATTTTCTCTATTCCTGATCCAGCATGGCACTGTGTTACTGAAGCTGGTCTCCCACTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 72 bp | TCAGGAATAGAGAAAATGCTTCAGCGATTAAAAGCATaGACAGCTCTTCCAGAGGATGAGGGTTCAGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SGIEKMLQRLKA*TALPEDEGSVP Trigger: GGGAACTGAACCCTCATCCTCTGGAAGAGCTGTCCATGCTTTTAATCGCTGAAGCATTTTCTCTATTCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCTTTCTACTTGTCTCTATCTGCCTCTTATTCCACATCAGTGTTCCTCATCATCTTACTCTCCACATaGCTTGCTCAGCCTATCACC | + |
|
Preference number: 3 (lower is better) Translates to: CPFYLSLSASYSTSVFLIILLST*LAQPIT Trigger: GGTGATAGGCTGAGCAAGCAATGTGGAGAGTAAGAT...GATGAGGAACACTGATGTGGAATAAGAGGCAGATAGAGACAAGTAGAAAGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 72 bp | TCTGCTTCCTATTTAACCAATAAGCCATCACTGCACTaGCCTCATACATGTCTTCTCATTCTGGACTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: SASYLTNKPSLH*PHTCLLILDSP Trigger: AGGGGAGTCCAGAATGAGAAGACATGTATGAGGTCAGTGCAGTGATGGCTTATTGGTTAAATAGGAAGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 72 bp | GCAGCTTGCAGCTACATAATGAGTTCAAAGCCATTCTaGATTACACAGTCAGGCCCTGACTCAAAAACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: AACSYIMSSKPF*ITQSGPDSKTN Trigger: GTTTGTTTTTGAGTCAGGGCCTGACTGTGTAATCCAGAATGGCTTTGAACTCATTATGTAGCTGCAAGCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 72 bp | GTTTCAGTTGTCTTAAGAAACCTGAGGTTTCTCACTTaGACTGTTGTGGCTTCTCTTGCATCCTGTCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: VSVVLRNLRFLT*TVVASLASCPL Trigger: AAGTGGACAGGATGCAAGAGAAGCCACAACAGTCCAAGTGAGAAACCTCAGGTTTCTTAAGACAACTGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 72 bp | TCTGCATTTGCTTCTCAGTCAGAACTTCTTCTATACTaGAGAGGTACAGAGGGACATGATTCTGTCCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SAFASQSELLLY*RGTEGHDSVLS Trigger: AGAAAGGACAGAATCATGTCCCTCTGTACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAAGCAAATGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 72 bp | TATTCCACATCAGTGTTCCTCATCAAAATTGCTTTCTaGGGGGAACAGAGTTGCCAACTACATACACTACAC | + |
|
Preference number: 3 (lower is better) Translates to: YSTSVFLIKIAF*GEQSCQLHTLH Trigger: GTGTAGTGTATGTAGTTGGCAACTCTGTTCCCCCCAGAAAGCAATTTTGATGAGGAACACTGATGTGGAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 72 bp | TCTTTCTTTCAATACAACAGGCCGGCACTTCAACACTaGTTTAGGTTACAAAATAAGAGCAGAGCAGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SFFQYNRPALQH*FRLQNKSRAAS Trigger: TGAAGCTGCTCTGCTCTTATTTTGTAACCTAAAGCAGTGTTGAAGTGCCGGCCTGTTGTATTGAAAGAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 72 bp | AAGTCCTCTCACCTTCTAACAGTACAAGGGCTATCATaGAACCCTATCATCAGTGTTTTCACCAAAGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KSSHLLTVQGLS*NPIISVFTKEK Trigger: TTTCTCTTTGGTGAAAACACTGATGATAGGGTTTCATGATAGCCCTTGTACTGTTAGAAGGTGAGAGGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 72 bp | TCTCACTATGCCACATGTATTTCTCTCATCATACACTaGAGTGAACAGTGCAACACCACCAAAAGGATCAAT | + |
|
Preference number: 3 (lower is better) Translates to: SHYATCISLIIH*SEQCNTTKRIN Trigger: ATTGATCCTTTTGGTGGTGTTGCACTGTTCACTTCAGTGTATGATGAGAGAAATACATGTGGCATAGTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 72 bp | AGGGACATGATTCTGTCCTTTCTACTTGTCTCTATCTaGCTCTTATTCCACATCAGTGTTCCTCATCAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: RDMILSFLLVSI*LLFHISVPHQN Trigger: ATTTTGATGAGGAACACTGATGTGGAATAAGAGGCAGATAGAGACAAGTAGAAAGGACAGAATCATGTCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR TCA 72 bp | AACCTGTTAATTCCTCCAAAGCTCAAGTACTGCCACTaGCCAAATTCCTTTGATCATCTTTCTATCAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: NLLIPPKLKYCH*PNSFDHLSIKD Trigger: GTCTTTGATAGAAAGATGATCAAAGGAATTTGGTCAGTGGCAGTACTTGAGCTTTGGAGGAATTAACAGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR GCA 72 bp | CATACATACCTACCATGTGATATGTTCAGAAAGCTTTaGCAGCACACTCTCATTCTCGTTCTTCATAATAAC | + |
|
Preference number: 3 (lower is better) Translates to: HTYLPCDMFRKL*QHTLILVLHNN Trigger: GTTATTATGAAGAACGAGAATGAGAGTGTGCTGGCAAAGCTTTCTGAACATATCACATGGTAGGTATGTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 72 bp | CAGTGCAACACCACCAAAAGGATCAATATTAAGAGCTaGATCCATAGATCTGTTGTTAATTACATGCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: QCNTTKRINIKS*IHRSVVNYMLC Trigger: ACACAGCATGTAATTAACAACAGATCTATGGATCCAGCTCTTAATATTGATCCTTTTGGTGGTGTTGCACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 72 bp | GTTCTCTACCGCATTTATAACCCACTCATTAATAATTaGCTTCAACCTAGGAGCTTTCAGAAGTTAGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: VLYRIYNPLINN*LQPRSFQKLEF Trigger: GAATTCTAACTTCTGAAAGCTCCTAGGTTGAAGCCAATTATTAATGAGTGGGTTATAAATGCGGTAGAGAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CCA 72 bp | CTTAAAGAACTCAAAACAAGAACTATAGATGAGACTTaGACAGAAAGAATATGTTGCATTTTCCTCTCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: LKELKTRTIDET*TERICCIFLSR Trigger: TCGGGAGAGGAAAATGCAACATATTCTTTCTGTCCAAGTCTCATCTATAGTTCTTGTTTTGAGTTCTTTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | GCACCGCCTGTCGGGCCCTGGTTGGGCTGTGTGCATGCCGCAGGAGTAATTCCCGCTCAGGAGGGCAGGTaGAGCTCTCGTAGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: APPVGPWLGCVHAAGVIPAQEGR*SSRRPP Trigger: AGGAGGCCTACGAGAGCTTCACCTGCCCTCCTGAGC...GGGAATTACTCCTGCGGCATGCACACAGCCCAACCAGGGCCCGACAGGCGGTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210448.2 |
||
| CDS-3UTR GCA 90 bp | GTTGGGCTGTGTGCATGCCGCAGGAGTAATTCCCCCAAGGATGGCCTCCGGCTCGGGGCCAGGCTCCTCTaGAGGGCTGGGCCTTCGACT | + |
|
Preference number: 4 (lower is better) Translates to: VGLCACRRSNSPKDGLRLGARLL*RAGPST Trigger: AGTCGAAGGCCCAGCCCTGCAGAGGAGCCTGGCCCC...GAGCCGGAGGCCATCCTTGGGGGAATTACTCCTGCGGCATGCACACAGCCCAAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211549.2 |
||
| CDS-3UTR GCA 90 bp | GGCTCTAAGGGAGGCTCTGAGCCAGCTCCACCATTGCTCAATGCCACCTCCAGCCCTTGTGGTACACGGTaGCCAGGGACCCGGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSKGGSEPAPPLLNATSSPCGTR*PGTREA Trigger: GGCCTCCCGGGTCCCTGGGCACCGTGTACCACAAGG...GCTGGAGGTGGCATTGAGCAATGGTGGAGCTGGCTCAGAGCCTCCCTTAGAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR CCA 90 bp | GTCCAAGTCCTGTTCCATCTCGCCCAGGTTGGAGAACCTGCACCGCCTGTCGGGGGGCCAGTGAAGGGCTaGCTCGGCAGCTGGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VQVLFHLAQVGEPAPPVGGPVKG*LGSWWR Trigger: TCTCCACCAGCTGCCGAGCCAGCCCTTCACTGGCCC...CCCGACAGGCGGTGCAGGTTCTCCAACCTGGGCGAGATGGAACAGGACTTGGAC 64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000210448.2 |
||
| CDS-3UTR TCA 90 bp | GCCTGTCGGGCCCTGGTTGGGCTGTGTGCATGCCGCAGGAGTAATTCCCCCAAGCCTGCAGCAGGGACTTaGCACTGGGCTGGAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: ACRALVGLCACRRSNSPKPAAGT*HWAGRP Trigger: TGGTCTTCCAGCCCAGTGTCAAGTCCCTGCTGCAGG...CTTGGGGGAATTACTCCTGCGGCATGCACACAGCCCAACCAGGGCCCGACAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210448.2 |
||
| CDS-3UTR GCA 90 bp | GCACCGCCTGTCGGGCCCTGGTTGGGCTGTGTGCATGCCGCAGGAGTAATTCCCTCTCGAACTGGCCCATaGCGCAACAGAGGTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: APPVGPWLGCVHAAGVIPSRTGP*RNRGWR Trigger: TCGCCAACCTCTGTTGCGGCATGGGCCAGTTCGAGA...GGGAATTACTCCTGCGGCATGCACACAGCCCAACCAGGGCCCGACAGGCGGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR GCA 90 bp | ACCGCCTGTCGGGCCCTGGTTGGGCTGTGTGCATGCCGCAGGAGTAATTCCCCCGGCTCTGGGGGTGGCTaGAAGAAGAACTCGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TACRALVGLCACRRSNSPGSGGG*KKNSSS Trigger: ACTGCTCGAGTTCTTCTTGCAGCCACCCCCAGAGCC...GGGGGAATTACTCCTGCGGCATGCACACAGCCCAACCAGGGCCCGACAGGCGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTCCTGTTCCATCTCGCCCAGGTTGGAGAACCTGCACCGCCTGTCGGGCCCCCTGCTGGCCCAGGGTaGCTTCTCGATGGACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QVLFHLAQVGEPAPPVGPPAGPG*LLDGQR Trigger: CCTTTGTCCATCGAGAAGGCACCCTGGGCCAGCAGG...GGGCCCGACAGGCGGTGCAGGTTCTCCAACCTGGGCGAGATGGAACAGGACTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCACCAGACGAACCTTCTTGGCTCCTTCTGGCCATGGCCCTGGTACCCCATGCATCACGGGCCTGCTaGCCCAGGGTGCCTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VAPDEPSWLLLAMALVPHASRAC*PRVPSR Trigger: TCGAGAAGGCACCCTGGGCCAGCAGGCCCGTGATGC...ATGGGGTACCAGGGCCATGGCCAGAAGGAGCCAAGAAGGTTCGTCTGGTGCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGCACCGCCTGTCGGGCCCTGGTTGGGCTGTGTGCATGCCGCAGGAGTAATGGCTCCTTCTGGCCATaGCCCTGGTACCCCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TCTACRALVGLCACRRSNGSFWP*PWYPIE Trigger: CTCAATGGGGTACCAGGGCCATGGCCAGAAGGAGCC...ATTACTCCTGCGGCATGCACACAGCCCAACCAGGGCCCGACAGGCGGTGCAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210448.2 |
||
| CDS-3UTR CCA 90 bp | TGGTTGGGCTGTGTGCATGCCGCAGGAGTAATTCCCCCAAGGATGGCCTCCGGCTGGCTCGGCAGCTGGTaGAGAGTCCGCAAAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WLGCVHAAGVIPPRMASGWLGSW*RVRKGL Trigger: CAGCCCTTTGCGGACTCTCCACCAGCTGCCGAGCCA...GCCGGAGGCCATCCTTGGGGGAATTACTCCTGCGGCATGCACACAGCCCAACCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210448.2 |
||
| CDS-3UTR TCA 90 bp | GTTGGGCTGTGTGCATGCCGCAGGAGTAATTCCCCCAAGGATGGCCTCCGGCTCCAAAGAGCACAGCCATaGAGGGGCCAGGCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGLCACRRSNSPKDGLRLQRAQP*RGQAPL Trigger: CAGAGGAGCCTGGCCCCTTCATGGCTGTGCTCTTTG...GAGCCGGAGGCCATCCTTGGGGGAATTACTCCTGCGGCATGCACACAGCCCAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211549.2 |
||
| CDS-3UTR GCA 90 bp | CTAGTCCAAGTCCTGTTCCATCTCGCCCAGGTTGGAGAACCTGCACCGCCTGTCGCTGCCCGAGGGCCTTaGCGCTCCAGGATTCGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LVQVLFHLAQVGEPAPPVAARGP*RSRIRT Trigger: GGTACGAATCCTGGAGCGGCAAGGCCCTCGGGCAGC...GACAGGCGGTGCAGGTTCTCCAACCTGGGCGAGATGGAACAGGACTTGGACTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGGCTGTGTGCATGCCGCAGGAGTAATTCCCCCAAGGATGGCCTCCGGCTCTGTAGCGGCCCACAGTaGGGCTCCCATCTGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VGLCACRRSNSPKDGLRLCSGPQ*GSHLTE Trigger: CTCTGTCAGATGGGAGCCCCACTGTGGGCCGCTACA...GAGCCGGAGGCCATCCTTGGGGGAATTACTCCTGCGGCATGCACACAGCCCAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR CAA 72 bp | GTGAAACAGTCCCGTCCAGCCCACACCCGCCTGGCTTaGCCAGGTCGGCAGGGCAGAAGGGCACTGAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: VKQSRPAHTRLA*PGRQGRRALKS Trigger: TGATTTCAGTGCCCTTCTGCCCTGCCGACCTGGCAAAGCCAGGCGGGTGTGGGCTGGACGGGACTGTTTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | GGCAGGTCCTGCTGTAGGACCCTCAGCCCAGTCCAGCTTGCCACGGGCAATGAGACACGCACAGTTGGCTaGGAAGTAGCACCAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRSCCRTLSPVQLATGNETRTVG*EVAPGL Trigger: AAGGCCTGGTGCTACTTCTCAGCCAACTGTGCGTGT...CTCATTGCCCGTGGCAAGCTGGACTGGGCTGAGGGTCCTACAGCAGGACCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGTCGGGCCCTGGTTGGGCTGTGTGCATGCCGCAGGAGTAATTCCCCCAAGGAAGAACTCGAGCAGTaGAGGCTCCCGAGCAACACA | + |
|
Preference number: 4 (lower is better) Translates to: ACRALVGLCACRRSNSPKEELEQ*RLPSNT Trigger: TGTGTTGCTCGGGAGCCTTCACTGCTCGAGTTCTTC...CTTGGGGGAATTACTCCTGCGGCATGCACACAGCCCAACCAGGGCCCGACAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR GCA 90 bp | CGGGCCCTGGTTGGGCTGTGTGCATGCCGCAGGAGTAATTCCCCCAAGGATGGCCCCGGGAGGCCAGCCTaGTTAACCAGTTCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RALVGLCACRRSNSPKDGPGRPA*LTSSSS Trigger: AGAAGATGAACTGGTTAAGCAGGCTGGCCTCCCGGG...GCCATCCTTGGGGGAATTACTCCTGCGGCATGCACACAGCCCAACCAGGGCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR GCA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCCCTTGTGGTACACGGTaGCCAGGGACCCGGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PNIKRSPCPGFQPRPQKAPCGTR*PGTREA Trigger: GGCCTCCCGGGTCCCTGGGCACCGTGTACCACAAGG...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGGGGCGCTCAGCCCTGTaGCCAGCACCGGGCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQGRSAL*PAPGRS Trigger: ACTTCTGCCCGGTGCTGGCCACAGGGCTGAGCGCCC...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GCCGCAGGAGTAATTCCCCCAAGGATGGCCTCCGGCTCCTCACTAGGGAATCAGCTTCTTGGCTCCTTCTaGCCATGGCCCTGGTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: AAGVIPPRMASGSSLGNQLLGSF*PWPWYP Trigger: GGGGTACCAGGGCCATGGCCAGAAGGAGCCAAGAAG...CTGATTCCCTAGTGAGGAGCCGGAGGCCATCCTTGGGGGAATTACTCCTGCGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210448.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGTAGGACCCTCAGCCCAGTCCAGCTTGCCACGGGCAATGAGGTACTTCGCCACCTCCAGCTCCTaGAGCTCTTGCCCAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PAVGPSAQSSLPRAMRYFATSSS*SSCPKL Trigger: GAGCTTTGGGCAAGAGCTCCAGGAGCTGGAGGTGGC...GAAGTACCTCATTGCCCGTGGCAAGCTGGACTGGGCTGAGGGTCCTACAGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210448.2 |
||
| 3UTR CAA 72 bp | GGAGGCTCTAAGGGAGGCTCTGAGCCAGCTCCACCATaGCTCAATGCCACCTCCAGCTCCTGGAGCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGSKGGSEPAPP*LNATSSSWSSC Trigger: GCAAGAGCTCCAGGAGCTGGAGGTGGCATTGAGCAATGGTGGAGCTGGCTCAGAGCCTCCCTTAGAGCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR TCA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCGGCTTCCAGGGCCCGTaGTGTCCTCCCTTCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PNIKRSPCPGFQPRPQKAGFQGP*CPPFSL Trigger: CAGGGAGAAGGGAGGACATCACGGGCCCTGGAAGCC...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048079.14 ENSMUST00000118726.8 |
||
| CDS-3UTR TCA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCAGGGCCTCGTGCCCATaGGGCATGCTCTGGTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PNIKRSPCPGFQPRPQKARASCP*GMLWSR Trigger: CCTCGACCAGAGCATGCCTCATGGGCACGAGGCCCT...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCTGCACCTCCAGTAGCTaGCCGAGGGCCTTGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PNIKRSPCPGFQPRPQKACTSSS*PRALPL Trigger: GAGCGGCAAGGCCCTCGGGCAGCTACTGGAGGTGCA...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGTGCACCTCCAGTAGCTaGCCGAGGGCCTTGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQCTSSS*PRALPL Trigger: GAGCGGCAAGGCCCTCGGGCAGCTACTGGAGGTGCA...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CAGCTGAGGTTCAGAAGGGTCCTGAAGAGACTCAGAGAGACCATGCAGAGCCGGAGAGCATCACGGGCCTaGTGGCCCAGGGTGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLRFRRVLKRLRETMQSRRASRA*WPRVPS Trigger: AGAAGGCACCCTGGGCCAGCAGGCCCGTGATGCTCT...CCGGCTCTGCATGGTCTCTCTGAGTCTCTTCAGGACCCTTCTGAACCTCAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR CCA 90 bp | CACCTAGTCCAAGTCCTGTTCCATCTCGCCCAGGTTGGAGAACCTGCACCGCCTCAGAGCCTCTCGAACTaGCCCATGCCGCAACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLVQVLFHLAQVGEPAPPQSLSN*PMPQQR Trigger: CCTCTGTTGCGGCATGGGCCAGTTCGAGAGGCTCTG...AGGCGGTGCAGGTTCTCCAACCTGGGCGAGATGGAACAGGACTTGGACTAGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR CCA 90 bp | GTAGGACCCTCAGCCCAGTCCAGCTTGCCACGGGCAATGAGGTACTTCTTGGCTGCCTTCATCCAGTGCTaGACTACTGGGCACAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VGPSAQSSLPRAMRYFLAAFIQC*TTGHRA Trigger: CGCCCTGTGCCCAGTAGTCCAGCACTGGATGAAGGC...AGCCAAGAAGTACCTCATTGCCCGTGGCAAGCTGGACTGGGCTGAGGGTCCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCCCCACCTAGTCCAAGTCCTGTTCCATCTCGCCCAGGTTGGAGAACCTGCAGCAGCTCCAGGCTCTaGGGGTGGCTGCAAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EPPPSPSPVPSRPGWRTCSSSRL*GWLQEE Trigger: TTCTTCTTGCAGCCACCCCCAGAGCCTGGAGCTGCT...GCAGGTTCTCCAACCTGGGCGAGATGGAACAGGACTTGGACTAGGTGGGGGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR CCA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCCAGAGCCAGACGAGATaGTGTGGAGGGGCGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PNIKRSPCPGFQPRPQKAQSQTR*CGGAGH Trigger: GTGCCCCGCCCCTCCACACCATCTCGTCTGGCTCTG...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCGGCTGGCTCGGCAGCTaGTGGAGAGTCCGCAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PNIKRSPCPGFQPRPQKAGWLGS*WRVRKG Trigger: CCCTTTGCGGACTCTCCACCAGCTGCCGAGCCAGCC...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TCAGCCCAGTCCAGCTTGCCACGGGCAATGAGGTACTTCTTGGCTTTGGATAGCGGCTGGCTCGGCAGCTaGTGGAGAGTCCGCAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAQSSLPRAMRYFLALDSGWLGS*WRVRKG Trigger: CCCTTTGCGGACTCTCCACCAGCTGCCGAGCCAGCC...GCTATCCAAAGCCAAGAAGTACCTCATTGCCCGTGGCAAGCTGGACTGGGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210448.2 |
||
| 3UTR CAA 72 bp | CAGGTCTTCTCCTGCACCTGGCTGCAGCTAGGGCTTTaGCCTACAGCCCGTGAACCCCAGCTGATCCGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QVFSCTWLQLGL*PTAREPQLIRL Trigger: TAACCGGATCAGCTGGGGTTCACGGGCTGTAGGCAAAAGCCCTAGCTGCAGCCAGGTGCAGGAGAAGACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGCCTTGTGGTACACGGTaGCCAGGGACCCGGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQPCGTR*PGTREA Trigger: GGCCTCCCGGGTCCCTGGGCACCGTGTACCACAAGG...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CCTGCTGTAGGACCCTCAGCCCAGTCCAGCTTGCCACGGGCAATGAGGTACTTCAGCACTGAGATCATCTaGACCTCCAGTAGCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PAVGPSAQSSLPRAMRYFSTEII*TSSSCP Trigger: CGGGCAGCTACTGGAGGTGCAGATGATCTCAGTGCT...GAAGTACCTCATTGCCCGTGGCAAGCTGGACTGGGCTGAGGGTCCTACAGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAGAGCATCACGGGCCTaGTGGCCCAGGGTGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQRASRA*WPRVPS Trigger: AGAAGGCACCCTGGGCCAGCAGGCCCGTGATGCTCT...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | GTCCAAGTCCTGTTCCATCTCGCCCAGGTTGGAGAACCTGCACCGCCTGTCGGGAGCTCCTGGAGCTCTTaGCCAAAGCTCTCTAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VQVLFHLAQVGEPAPPVGSSWSS*PKLSSP Trigger: AGGACTAGAGAGCTTTGGGCAAGAGCTCCAGGAGCT...CCCGACAGGCGGTGCAGGTTCTCCAACCTGGGCGAGATGGAACAGGACTTGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210448.2 |
||
| CDS-3UTR GCA 90 bp | CCTGCTGTAGGACCCTCAGCCCAGTCCAGCTTGCCACGGGCAATGAGGTACTTCTCCACCATTGCTCAATaGCACCTCCAGCTCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PAVGPSAQSSLPRAMRYFSTIAQ*HLQLLE Trigger: CTCCAGGAGCTGGAGGTGGCATTGAGCAATGGTGGA...GAAGTACCTCATTGCCCGTGGCAAGCTGGACTGGGCTGAGGGTCCTACAGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210448.2 |
||
| CDS-3UTR CCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGGTGGGCTAGGGGCATaGTGCCGGCAGCAGCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQGGLGA*CRQQRG Trigger: ACCACGCTGCTGCCGGCACCATGCCCCTAGCCCACC...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCGGTGGGCTAGGGGCATaGTGCCGGCAGCAGCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISAGGLGA*CRQQRG Trigger: ACCACGCTGCTGCCGGCACCATGCCCCTAGCCCACC...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGATGCTCTGGTCGAGGTaGGCTAGGGGCATGGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQMLWSR*ARGMVP Trigger: CGGCACCATGCCCCTAGCCCACCTCGACCAGAGCAT...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CATGCCGCAGGAGTAATTCCCCCAAGGATGGCCTCCGGCTCCTCACTAGGGAATCCAGACGAACCTTCTTaGCTCCTTCTGGCCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HAAGVIPPRMASGSSLGNPDEPS*LLLAMA Trigger: GGCCATGGCCAGAAGGAGCCAAGAAGGTTCGTCTGG...ATTCCCTAGTGAGGAGCCGGAGGCCATCCTTGGGGGAATTACTCCTGCGGCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210448.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGTGGCTCGGCAGCTGGTaGAGAGTCCGCAAAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQWLGSW*RVRKGL Trigger: CAGCCCTTTGCGGACTCTCCACCAGCTGCCGAGCCA...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGCCTGCAGCAGGGACTTaGCACTGGGCTGGAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQPAAGT*HWAGRP Trigger: TGGTCTTCCAGCCCAGTGTCAAGTCCCTGCTGCAGG...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGCCTGCTGGCCCAGGGTaGCTTCTCGATGGACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQPAGPG*LLDGQR Trigger: CCTTTGTCCATCGAGAAGGCACCCTGGGCCAGCAGG...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCCCTGCTGGCCCAGGGTaGCTTCTCGATGGACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PNIKRSPCPGFQPRPQKAPAGPG*LLDGQR Trigger: CCTTTGTCCATCGAGAAGGCACCCTGGGCCAGCAGG...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGCGTGCCCATGAGGCATaGTCTGGTCGAGGTGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQRAHEA*SGRGGL Trigger: TAGCCCACCTCGACCAGAGCATGCCTCATGGGCACG...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | GGGCAGGTGAGCCTACAACAGAATCTTCCCTGGCTCCGAAGCACCCACAGCATCTCCACCATTGCTCAATaGCACCTCCAGCTCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GQVSLQQNLPWLRSTHSISTIAQ*HLQLLE Trigger: CTCCAGGAGCTGGAGGTGGCATTGAGCAATGGTGGA...GATGCTGTGGGTGCTTCGGAGCCAGGGAAGATTCTGTTGTAGGCTCACCTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGGCCTTCATCCAGTGCTaGACTACTGGGCACAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQAFIQC*TTGHRA Trigger: CGCCCTGTGCCCAGTAGTCCAGCACTGGATGAAGGC...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GAGAGCCCCCACCTAGTCCAAGTCCTGTTCCATCTCGCCCAGGTTGGAGAACCTAAAGAGGAGAAGACGTaGAGCAGCTCCAGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESPHLVQVLFHLAQVGEPKEEKT*SSSRLW Trigger: CCAGAGCCTGGAGCTGCTCCACGTCTTCTCCTCTTT...AGGTTCTCCAACCTGGGCGAGATGGAACAGGACTTGGACTAGGTGGGGGCTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR CCA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCTGTAGCGGCCCACAGTaGGGCTCCCATCTGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PNIKRSPCPGFQPRPQKACSGPQ*GSHLTE Trigger: CTCTGTCAGATGGGAGCCCCACTGTGGGCCGCTACA...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGGGGCGCTCAGCCCTGTaGCCAGCACCGGGCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQGRSAL*PAPGRS Trigger: ACTTCTGCCCGGTGCTGGCCACAGGGCTGAGCGCCC...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CATCAGTATCTGCTGATACCCATGAAGTTGCTGATGTACCTCCACCTGTCCCAGGGGCGCTCAGCCCTGTaGCCAGCACCGGGCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HQYLLIPMKLLMYLHLSQGRSAL*PAPGRS Trigger: ACTTCTGCCCGGTGCTGGCCACAGGGCTGAGCGCCC...CTGGGACAGGTGGAGGTACATCAGCAACTTCATGGGTATCAGCAGATACTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGGGTGGGCTAGGGGCATaGTGCCGGCAGCAGCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQGGLGA*CRQQRG Trigger: ACCACGCTGCTGCCGGCACCATGCCCCTAGCCCACC...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGCCAGACGAGATGGTGTaGAGGGGCGGGGCACTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQPDEMV*RGGALL Trigger: TAACAGTGCCCCGCCCCTCCACACCATCTCGTCTGG...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GGAGAGACGAAAGAAGAGAGCGTCTTTGTGCTGTTTAAAGACAGGGCAGGGCAGCAGAGCCAGACGAGATaGTGTGGAGGGGCGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GETKEESVFVLFKDRAGQQSQTR*CGGAGH Trigger: GTGCCCCGCCCCTCCACACCATCTCGTCTGGCTCTG...CTGCCCTGCCCTGTCTTTAAACAGCACAAAGACGCTCTCTTCTTTCGTCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CCACCTAGTCCAAGTCCTGTTCCATCTCGCCCAGGTTGGAGAACCTGCACCGCCACTAGGGCTGGAAGTTaGAGATGCAGTAAGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPSPSPVPSRPGWRTCTATRAGS*RCSKPW Trigger: CCAGGGCTTACTGCATCTCCAACTTCCAGCCCTAGT...GGCGGTGCAGGTTCTCCAACCTGGGCGAGATGGAACAGGACTTGGACTAGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211549.2 |
||
| CDS-3UTR CCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCGGCTGGCTCGGCAGCTaGTGGAGAGTCCGCAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISAGWLGS*WRVRKG Trigger: CCCTTTGCGGACTCTCCACCAGCTGCCGAGCCAGCC...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCGCAGGGAAGTCCTCCTaGGAGGCCGCAAAGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PNIKRSPCPGFQPRPQKAAGKSS*EAAKLS Trigger: TGAGAGCTTTGCGGCCTCCCAGGAGGACTTCCCTGC...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCGCCTGTCGGGCCCTaGTTGGGCTGTGTGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQPPVGP*LGCVHA Trigger: GGCATGCACACAGCCCAACCAGGGCCCGACAGGCGG...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCGAAGAGCCTCACCTTaGCGCTCAGAAGCCCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISARRASP*RSEAPP Trigger: GGGCGGGGCTTCTGAGCGCCAAGGTGAGGCTCTTCG...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| 3UTR CAA 72 bp | TCCTGTGGTACCAATCGTGGCACCAGACGAACCTTCTaGGCTCCTTCTGGCCATGGCCCTGGTACCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SCGTNRGTRRTF*APSGHGPGTPL Trigger: CAATGGGGTACCAGGGCCATGGCCAGAAGGAGCCAAGAAGGTTCGTCTGGTGCCACGATTGGTACCACAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| 3UTR CAA 72 bp | GCCCAGTCCAGCTTGCCACGGGCAATGAGGTACTTCTaGGCTTTGGATAGCAGAGCAGGGAAGTCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AQSSLPRAMRYF*ALDSRAGKSSW Trigger: CCAGGAGGACTTCCCTGCTCTGCTATCCAAAGCCAAGAAGTACCTCATTGCCCGTGGCAAGCTGGACTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000137158.8 ENSMUST00000210448.2 ENSMUST00000211549.2 |
||
| 3UTR CAA 72 bp | GCAGGTCCTGCTGTAGGACCCTCAGCCCAGTCCAGCTaGCCACGGGCAATGAGGTACTTCTTGGCTTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AGPAVGPSAQSS*PRAMRYFLALD Trigger: ATCCAAAGCCAAGAAGTACCTCATTGCCCGTGGCAAGCTGGACTGGGCTGAGGGTCCTACAGCAGGACCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000137158.8 ENSMUST00000210448.2 ENSMUST00000211549.2 |
||
| CDS-3UTR TCA 90 bp | GTGGCACCAGACGAACCTTCTTGGCTCCTTCTGGCCATGGCCCTGGTACCCCATACCACCTGGGACCAATaGTTCTTGAAGACCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VAPDEPSWLLLAMALVPHTTWDQ*FLKTMR Trigger: CCTCATGGTCTTCAAGAATCATTGGTCCCAGGTGGT...ATGGGGTACCAGGGCCATGGCCAGAAGGAGCCAAGAAGGTTCGTCTGGTGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR TCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCGCCCTGGTACCCCATTaGGCTGGGGTGGGAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISAALVPH*AGVGVG Trigger: ACCTACTCCCACCCCAGCTCAATGGGGTACCAGGGC...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCCTGGTACCCCATTaGGCTGGGGTGGGAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQALVPH*AGVGVG Trigger: ACCTACTCCCACCCCAGCTCAATGGGGTACCAGGGC...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | GAGAGCCCCCACCTAGTCCAAGTCCTGTTCCATCTCGCCCAGGTTGGAGAACCTCCGTCAGCAGGAAGTTaGCATAGACGGAGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ESPHLVQVLFHLAQVGEPPSAGS*HRRSSA Trigger: TGCAGAACTCCGTCTATGTCAACTTCCTGCTGACGG...AGGTTCTCCAACCTGGGCGAGATGGAACAGGACTTGGACTAGGTGGGGGCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210448.2 |
||
| CDS-3UTR TCA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCTCTCAATTGCACCAGTaGAGGGCTGGCTCGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PNIKRSPCPGFQPRPQKASQLHQ*RAGSAA Trigger: AGCTGCCGAGCCAGCCCTTCACTGGTGCAATTGAGA...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074686.10 |
||
| CDS-3UTR GCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCACCTTGTGGTACACGGTaGCCAGGGACCCGGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISPCGTR*PGTREA Trigger: GGCCTCCCGGGTCCCTGGGCACCGTGTACCACAAGG...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | GGCTCTAAGGGAGGCTCTGAGCCAGCTCCACCATTGCTCAATGCCACCTCCAGCTCATCCCATTGCAACTaGCATGTCAACACTCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSKGGSEPAPPLLNATSSSSHCN*HVNTRL Trigger: GAGCCGAGTGTTGACATGGCAGTTGCAATGGGATGA...GCTGGAGGTGGCATTGAGCAATGGTGGAGCTGGCTCAGAGCCTCCCTTAGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGTCTCGAACTGGCCCATaGCGCAACAGAGGTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQSRTGP*RNRGWR Trigger: TCGCCAACCTCTGTTGCGGCATGGGCCAGTTCGAGA...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCCAGGCCTTCATCCAGTaGTGGACTACTGGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PNIKRSPCPGFQPRPQKAQAFIQ*WTTGHR Trigger: CCTGTGCCCAGTAGTCCAGCACTGGATGAAGGCCTG...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGTCCCGGCGCAAGCAGTaGCAATCATCCCCCGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQSRRKQ*QSSPGT Trigger: GGTTCCGGGGGATGATTGGCACTGCTTGCGCCGGGA...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCTCCACAGAGGTCTTGTaGAGGGCAGGGCCCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: PNIKRSPCPGFQPRPQKASTEVL*RAGPMT Trigger: TGTCATGGGCCCTGCCCTGCACAAGACCTCTGTGGA...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCGACTCAGAGAGACCATaGAGAGCCGGGAGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PNIKRSPCPGFQPRPQKADSERP*RAGSCC Trigger: GCAGCAACTCCCGGCTCTGCATGGTCTCTCTGAGTC...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GCCCAGTCCAGCTTGCCACGGGCAATGAGGTACTTCTTGGCTTTGGATAGCAGATGCCGCAACAGAGGTTaGCGAGCTTCGCTCACTAGC | + |
|
Preference number: 4 (lower is better) Translates to: AQSSLPRAMRYFLALDSRCRNRG*RASLTS Trigger: GCTAGTGAGCGAAGCTCGCCAACCTCTGTTGCGGCA...TCTGCTATCCAAAGCCAAGAAGTACCTCATTGCCCGTGGCAAGCTGGACTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR CCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCAGTGCTGGACTACTaGGCACAGGGCGGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQPVLDY*AQGGHR Trigger: CCTGTGGCCGCCCTGTGCCCAGTAGTCCAGCACTGG...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGCACTGAAATCAGTAGGGCTGCTACCAAATCTTCTAGAACAGGCAGGGTCCCAGTGCTGGACTACTaGGCACAGGGCGGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGTEISRAATKSSRTGRVPVLDY*AQGGHR Trigger: CCTGTGGCCGCCCTGTGCCCAGTAGTCCAGCACTGG...GACCCTGCCTGTTCTAGAAGATTTGGTAGCAGCCCTACTGATTTCAGTGCCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGTGAGCCTACAACAGAATCTTCCCTGGCTCCGAAGCACCCACAGCATCACACACACGCACAGTTaGCTGAGAAGTAGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GQVSLQQNLPWLRSTHSITHTHS*LRSSTR Trigger: CCTGGTGCTACTTCTCAGCCAACTGTGCGTGTGTGT...GATGCTGTGGGTGCTTCGGAGCCAGGGAAGATTCTGTTGTAGGCTCACCTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCAGCAGCTCCAGGCTCTaGGGGTGGCTGCAAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PNIKRSPCPGFQPRPQKASSSRL*GWLQEE Trigger: TTCTTCTTGCAGCCACCCCCAGAGCCTGGAGCTGCT...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCATGCTCTGGTCGAGGTaGGCTAGGGGCATGGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISAMLWSR*ARGMVP Trigger: CGGCACCATGCCCCTAGCCCACCTCGACCAGAGCAT...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GCAGTACCTTTCCTGTCGGATGCAGCCTACTATGATCTACTGGGCGTGCTAGTGGGCTCCTTCTGGCCATaGCCCTGGTACCCCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AVPFLSDAAYYDLLGVLVGSFWP*PWYPIE Trigger: CTCAATGGGGTACCAGGGCCATGGCCAGAAGGAGCC...CACTAGCACGCCCAGTAGATCATAGTAGGCTGCATCCGACAGGAAAGGTACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGCCAGACGAACCTTCTTaGCTCCTTCTGGCCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQPDEPS*LLLAMA Trigger: GGCCATGGCCAGAAGGAGCCAAGAAGGTTCGTCTGG...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GCAGTACCTTTCCTGTCGGATGCAGCCTACTATGATCTACTGGGCGTGCTAGTGGCCACCTCCAGCTCCTaGAGCTCTTGCCCAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AVPFLSDAAYYDLLGVLVATSSS*SSCPKL Trigger: GAGCTTTGGGCAAGAGCTCCAGGAGCTGGAGGTGGC...CACTAGCACGCCCAGTAGATCATAGTAGGCTGCATCCGACAGGAAAGGTACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGTGGCTCGGCAGCTGGTaGAGAGTCCGCAAAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQWLGSW*RVRKGL Trigger: CAGCCCTTTGCGGACTCTCCACCAGCTGCCGAGCCA...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GGAGAGACGAAAGAAGAGAGCGTCTTTGTGCTGTTTAAAGACAGGGCAGGGCAGTGGCTCGGCAGCTGGTaGAGAGTCCGCAAAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GETKEESVFVLFKDRAGQWLGSW*RVRKGL Trigger: CAGCCCTTTGCGGACTCTCCACCAGCTGCCGAGCCA...CTGCCCTGCCCTGTCTTTAAACAGCACAAAGACGCTCTCTTCTTTCGTCTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGGGCTGGCTCGGCAGCTaGTGGAGAGTCCGCAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQGWLGS*WRVRKG Trigger: CCCTTTGCGGACTCTCCACCAGCTGCCGAGCCAGCC...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCTGTCGGGCCCTGGTTaGGCTGTGTGCATGCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQLSGPG*AVCMPQ Trigger: CTGCGGCATGCACACAGCCCAACCAGGGCCCGACAG...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGGAAGAACTCGAGCAGTaGAGGCTCCCGAGCAACACA | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQEELEQ*RLPSNT Trigger: TGTGTTGCTCGGGAGCCTTCACTGCTCGAGTTCTTC...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCACCCACCTCGTGCCCATaGGGCATGCTCTGGTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISPTSCP*GMLWSR Trigger: CCTCGACCAGAGCATGCCTCATGGGCACGAGGTGGG...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048079.14 ENSMUST00000118726.8 |
||
| CDS-3UTR TCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGCCTGCAGCAGGGACTTaGCACTGGGCTGGAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQPAAGT*HWAGRP Trigger: TGGTCTTCCAGCCCAGTGTCAAGTCCCTGCTGCAGG...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCCTGCAGCAGGGACTTaGCACTGGGCTGGAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISAPAAGT*HWAGRP Trigger: TGGTCTTCCAGCCCAGTGTCAAGTCCCTGCTGCAGG...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAAAGAGCACAGCCATaGAGGGGCCAGGCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISAQRAQP*RGQAPL Trigger: CAGAGGAGCCTGGCCCCTTCATGGCTGTGCTCTTTG...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118726.8 ENSMUST00000211549.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGCCCGGGAGGCCAGCCTaGTTAACCAGTTCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQPGRPA*LTSSSS Trigger: AGAAGATGAACTGGTTAAGCAGGCTGGCCTCCCGGG...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCTGCCCGAGGGCCTTaGCGCTCCAGGATTCGTACC | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISAARGP*RSRIRT Trigger: GGTACGAATCCTGGAGCGGCAAGGCCCTCGGGCAGC...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCATGCACCTCCAGTAGCTaGCCGAGGGCCTTGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISCTSSS*PRALPL Trigger: GAGCGGCAAGGCCCTCGGGCAGCTACTGGAGGTGCA...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AACTGGGTTAGACCTAGCCTTAGCATCATATCAACTCTGGCCCCCACATCAGTATGCACCTCCAGTAGCTaGCCGAGGGCCTTGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NWVRPSLSIISTLAPTSVCTSSS*PRALPL Trigger: GAGCGGCAAGGCCCTCGGGCAGCTACTGGAGGTGCA...TACTGATGTGGGGGCCAGAGTTGATATGATGCTAAGGCTAGGTCTAACCCAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAGCACTGAGATCATCTaGACCTCCAGTAGCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQSTEII*TSSSCP Trigger: CGGGCAGCTACTGGAGGTGCAGATGATCTCAGTGCT...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCCTGCTGGCCCAGGGTaGCTTCTCGATGGACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISAPAGPG*LLDGQR Trigger: CCTTTGTCCATCGAGAAGGCACCCTGGGCCAGCAGG...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGAGAGCATCACGGGCCTaGTGGCCCAGGGTGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQRASRA*WPRVPS Trigger: AGAAGGCACCCTGGGCCAGCAGGCCCGTGATGCTCT...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCTCCACCATTGCTCAATaGCACCTCCAGCTCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PNIKRSPCPGFQPRPQKASTIAQ*HLQLLE Trigger: CTCCAGGAGCTGGAGGTGGCATTGAGCAATGGTGGA...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGAGCCTCTCGAACTaGCCCATGCCGCAACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISAQSLSN*PMPQQR Trigger: CCTCTGTTGCGGCATGGGCCAGTTCGAGAGGCTCTG...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCACCAGTGCTGGACTACTaGGCACAGGGCGGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISPVLDY*AQGGHR Trigger: CCTGTGGCCGCCCTGTGCCCAGTAGTCCAGCACTGG...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAGGGTGCCTTCTCGATaGACAAAGGGGACAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQRVPSR*TKGTRR Trigger: TCGCCTTGTCCCCTTTGTCCATCGAGAAGGCACCCT...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCATCACGGGCCTGCTaGCCCAGGGTGCCTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISASRAC*PRVPSR Trigger: TCGAGAAGGCACCCTGGGCCAGCAGGCCCGTGATGC...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGTGTAGCGGCCCACAGTaGGGCTCCCATCTGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQCSGPQ*GSHLTE Trigger: CTCTGTCAGATGGGAGCCCCACTGTGGGCCGCTACA...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CATCAGTATCTGCTGATACCCATGAAGTTGCTGATGTACCTCCACCTGTCCCAGATGCTCTGGTCGAGGTaGGCTAGGGGCATGGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: HQYLLIPMKLLMYLHLSQMLWSR*ARGMVP Trigger: CGGCACCATGCCCCTAGCCCACCTCGACCAGAGCAT...CTGGGACAGGTGGAGGTACATCAGCAACTTCATGGGTATCAGCAGATACTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGGCTCCTTCTGGCCATaGCCCTGGTACCCCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQGSFWP*PWYPIE Trigger: CTCAATGGGGTACCAGGGCCATGGCCAGAAGGAGCC...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCTTCTTGGCTCCTTCTaGCCATGGCCCTGGTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISALLGSF*PWPWYP Trigger: GGGGTACCAGGGCCATGGCCAGAAGGAGCCAAGAAG...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACCTCCAGCTCCTaGAGCTCTTGCCCAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQATSSS*SSCPKL Trigger: GAGCTTTGGGCAAGAGCTCCAGGAGCTGGAGGTGGC...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGGGCCAGTGAAGGGCTaGCTCGGCAGCTGGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISGPVKG*LGSWWR Trigger: TCTCCACCAGCTGCCGAGCCAGCCCTTCACTGGCCC...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048079.14 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCACTGTCGGGCCCTGGTTaGGCTGTGTGCATGCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISLSGPG*AVCMPQ Trigger: CTGCGGCATGCACACAGCCCAACCAGGGCCCGACAG...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTCCGCCTGTCGGGCCCTaGTTGGGCTGTGTGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWIPPVGP*LGCVHA Trigger: GGCATGCACACAGCCCAACCAGGGCCCGACAGGCGG...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGTGACAGCATGGGCCTaGGAGATGGCAGCCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQVTAWA*EMAANS Trigger: GGAGTTGGCTGCCATCTCCCAGGCCCATGCTGTCAC...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGGTTTGTCTTCGGAGTTCGACAGCGACGAATGAAGCTGAGGCAAGAGATGGTGACAGCATGGGCCTaGGAGATGGCAGCCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGFVFGVRQRRMKLRQEMVTAWA*EMAANS Trigger: GGAGTTGGCTGCCATCTCCCAGGCCCATGCTGTCAC...CATCTCTTGCCTCAGCTTCATTCGTCGCTGTCGAACTCCGAAGACAAACCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGAGTGGGGCTCCCATCTaGCAGAGCCATGAGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQSGAPI*QSHEQK Trigger: CTTCTGCTCATGGCTCTGTCAGATGGGAGCCCCACT...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGACTCAAGGGAACTCATaGAGAGTGCAAGGGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQTQGNS*RVQGQA Trigger: TGCCTGCCCTTGCACTCTTCATGAGTTCCCTTGAGT...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCTCAGGAGGGCAGGTaGAGCTCTCGTAGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISAQEGR*SSRRPP Trigger: AGGAGGCCTACGAGAGCTTCACCTGCCCTCCTGAGC...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CCCCACCTAGTCCAAGTCCTGTTCCATCTCGCCCAGGTTGGAGAACCTGCACCGCCAAACTCATCCCATTaGAACTGCCATGTCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: PHLVQVLFHLAQVGEPAPPNSSH*NCHVNT Trigger: AGTGTTGACATGGCAGTTGCAATGGGATGAGTTTGG...CGGTGCAGGTTCTCCAACCTGGGCGAGATGGAACAGGACTTGGACTAGGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGTCTCGAACTGGCCCATaGCGCAACAGAGGTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQSRTGP*RNRGWR Trigger: TCGCCAACCTCTGTTGCGGCATGGGCCAGTTCGAGA...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGCAGGCCTTCATCCAGTaGTGGACTACTGGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQQAFIQ*WTTGHR Trigger: CCTGTGCCCAGTAGTCCAGCACTGGATGAAGGCCTG...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGGCTCTGGGGGTGGCTaGAAGAAGAACTCGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQGSGGG*KKNSSS Trigger: ACTGCTCGAGTTCTTCTTGCAGCCACCCCCAGAGCC...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CAGCTGAGGTTCAGAAGGGTCCTGAAGAGACTCAGAGAGACCATGCAGAGCCGGGAAGTAAGAGTGATCTaGGATGTAGCGGCCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: QLRFRRVLKRLRETMQSREVRVI*DVAAHS Trigger: ACTGTGGGCCGCTACATCGCAGATCACTCTTACTTC...CCGGCTCTGCATGGTCTCTCTGAGTCTCTTCAGGACCCTTCTGAACCTCAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR GCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCGACTCAGAGAGACCATaGAGAGCCGGGAGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISADSERP*RAGSCC Trigger: GCAGCAACTCCCGGCTCTGCATGGTCTCTCTGAGTC...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCGTGCCCATGAGGCATaGTCTGGTCGAGGTGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQRAHEA*SGRGGL Trigger: TAGCCCACCTCGACCAGAGCATGCCTCATGGGCACG...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCACAGAGCCCAGCACCTaGAGCAGGGACTTGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISATEPST*SRDLTL Trigger: CAGTGTCAAGTCCCTGCTGCAGGTGCTGGGCTCTGT...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGGTTTGTCTTCGGAGTTCGACAGCGACGAATGAAGCTGAGGCAAGAGATGACAGAGCCCAGCACCTaGAGCAGGGACTTGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: SGFVFGVRQRRMKLRQEMTEPST*SRDLTL Trigger: CAGTGTCAAGTCCCTGCTGCAGGTGCTGGGCTCTGT...CATCTCTTGCCTCAGCTTCATTCGTCGCTGTCGAACTCCGAAGACAAACCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGTTGGGCTGTGTGCATaGCGCAGGAGTAATTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQVGLCA*RRSNSP Trigger: GGGGGAATTACTCCTGCGGCATGCACACAGCCCAAC...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGTGCCGCAACAGAGGTTaGCGAGCTTCGCTCACTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQCRNRG*RASLTS Trigger: GCTAGTGAGCGAAGCTCGCCAACCTCTGTTGCGGCA...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GAGAAACTCAGGGAAAATGACTGCACAGTAGACAGCATTCTTGACTCGAAGAGCCCAGTGCTGGACTACTaGGCACAGGGCGGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: EKLRENDCTVDSILDSKSPVLDY*AQGGHR Trigger: CCTGTGGCCGCCCTGTGCCCAGTAGTCCAGCACTGG...GCTCTTCGAGTCAAGAATGCTGTCTACTGTGCAGTCATTTTCCCTGAGTTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR CCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCAGCAGCTCCAGGCTCTaGGGGTGGCTGCAAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISASSSRL*GWLQEE Trigger: TTCTTCTTGCAGCCACCCCCAGAGCCTGGAGCTGCT...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTGCATCACGGGCCTGCTaGCCCAGGGTGCCTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWIASRAC*PRVPSR Trigger: TCGAGAAGGCACCCTGGGCCAGCAGGCCCGTGATGC...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TGCTGTAGGACCCTCAGCCCAGTCCAGCTTGCCACGGGCAATGAGGTACTTCTTCTGTGGTACCAATCGTaGCACCAGACGAACCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CCRTLSPVQLATGNEVLLLWYQS*HQTNLL Trigger: AAGAAGGTTCGTCTGGTGCCACGATTGGTACCACAG...AAGAAGTACCTCATTGCCCGTGGCAAGCTGGACTGGGCTGAGGGTCCTACAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210448.2 |
||
| CDS-3UTR CCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGGCCACCTCCAGCTCCTaGAGCTCTTGCCCAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQATSSS*SSCPKL Trigger: GAGCTTTGGGCAAGAGCTCCAGGAGCTGGAGGTGGC...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTGGGCCAGTGAAGGGCTaGCTCGGCAGCTGGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWIGPVKG*LGSWWR Trigger: TCTCCACCAGCTGCCGAGCCAGCCCTTCACTGGCCC...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048079.14 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTCGAAGAGCCTCACCTTaGCGCTCAGAAGCCCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWIRRASP*RSEAPP Trigger: GGGCGGGGCTTCTGAGCGCCAAGGTGAGGCTCTTCG...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| 3UTR CAA 72 bp | GCACATAACCAAGGAATAGGCTCAGCAGCCCAGAGTTaGTACAGGACCTTCATGAAGGAGCCAAGGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AHNQGIGSAAQS*YRTFMKEPRGG Trigger: CCCTCCCCTTGGCTCCTTCATGAAGGTCCTGTACAAACTCTGGGCTGCTGAGCCTATTCCTTGGTTATGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCACCACCTGGGACCAATaGTTCTTGAAGACCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PNIKRSPCPGFQPRPQKATTWDQ*FLKTMR Trigger: CCTCATGGTCTTCAAGAATCATTGGTCCCAGGTGGT...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGACCACCTGGGACCAATaGTTCTTGAAGACCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQTTWDQ*FLKTMR Trigger: CCTCATGGTCTTCAAGAATCATTGGTCCCAGGTGGT...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCACACGCACAGTTGGCTaGGAAGTAGCACCAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISATRTVG*EVAPGL Trigger: AAGGCCTGGTGCTACTTCTCAGCCAACTGTGCGTGT...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGACACGCACAGTTGGCTaGGAAGTAGCACCAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQTRTVG*EVAPGL Trigger: AAGGCCTGGTGCTACTTCTCAGCCAACTGTGCGTGT...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGAAGAACTCGAGCAGTaGAGGCTCCCGAGCAACACA | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQEELEQ*RLPSNT Trigger: TGTGTTGCTCGGGAGCCTTCACTGCTCGAGTTCTTC...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | TCAGGGTTTGTCTTCGGAGTTCGACAGCGACGAATGAAGCTGAGGCAAGAGATGAATCTTTCGAGGCAGTaGGGAGTACAGGGCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGFVFGVRQRRMKLRQEMNLSRQ*GVQGAQ Trigger: CTGAGCGCCCTGTACTCCTCACTGCCTCGAAAGATT...CATCTCTTGCCTCAGCTTCATTCGTCGCTGTCGAACTCCGAAGACAAACCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTGCTCAGGAGGGCAGGTaGAGCTCTCGTAGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWIAQEGR*SSRRPP Trigger: AGGAGGCCTACGAGAGCTTCACCTGCCCTCCTGAGC...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCTTGCCACGGGCAATaGGGTACTTCTTGGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQACHGQ*GTSWLW Trigger: CCAAAGCCAAGAAGTACCTCATTGCCCGTGGCAAGC...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | GGAGAGACGAAAGAAGAGAGCGTCTTTGTGCTGTTTAAAGACAGGGCAGGGCAGGCTTGCCACGGGCAATaGGGTACTTCTTGGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GETKEESVFVLFKDRAGQACHGQ*GTSWLW Trigger: CCAAAGCCAAGAAGTACCTCATTGCCCGTGGCAAGC...CTGCCCTGCCCTGTCTTTAAACAGCACAAAGACGCTCTCTTCTTTCGTCTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCCCGGGAGGCCAGCCTaGTTAACCAGTTCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISAPGRPA*LTSSSS Trigger: AGAAGATGAACTGGTTAAGCAGGCTGGCCTCCCGGG...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCCCTTGTGGTACACGGTaGCCAGGGACCCGGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSPCGTR*PGTREA Trigger: GGCCTCCCGGGTCCCTGGGCACCGTGTACCACAAGG...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGGTTTGTCTTCGGAGTTCGACAGCGACGAATGAAGCTGAGGCAAGAGATGAGCACTGAGATCATCTaGACCTCCAGTAGCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SGFVFGVRQRRMKLRQEMSTEII*TSSSCP Trigger: CGGGCAGCTACTGGAGGTGCAGATGATCTCAGTGCT...CATCTCTTGCCTCAGCTTCATTCGTCGCTGTCGAACTCCGAAGACAAACCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCTCATCCCATTGCAACTaGCATGTCAACACTCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PNIKRSPCPGFQPRPQKASSHCN*HVNTRL Trigger: GAGCCGAGTGTTGACATGGCAGTTGCAATGGGATGA...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGTCATCCCATTGCAACTaGCATGTCAACACTCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQSSHCN*HVNTRL Trigger: GAGCCGAGTGTTGACATGGCAGTTGCAATGGGATGA...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTAGAGCATCACGGGCCTaGTGGCCCAGGGTGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWIRASRA*WPRVPS Trigger: AGAAGGCACCCTGGGCCAGCAGGCCCGTGATGCTCT...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCCCGGCGCAAGCAGTaGCAATCATCCCCCGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWISRRKQ*QSSPGT Trigger: GGTTCCGGGGGATGATTGGCACTGCTTGCGCCGGGA...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCGGAACTCATGAAGAGTaGAAGGGCAGGCACTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PNIKRSPCPGFQPRPQKAGTHEE*KGRHSY Trigger: ATAGGAGTGCCTGCCCTTGCACTCTTCATGAGTTCC...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGTCCACAGAGGTCTTGTaGAGGGCAGGGCCCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQSTEVL*RAGPMT Trigger: TGTCATGGGCCCTGCCCTGCACAAGACCTCTGTGGA...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAGGGCACTGAAATCAGTAGGGCTGCTACCAAATCTTCTAGAACAGGCAGGGTCGACTCAGAGAGACCATaGAGAGCCGGGAGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KGTEISRAATKSSRTGRVDSERP*RAGSCC Trigger: GCAGCAACTCCCGGCTCTGCATGGTCTCTCTGAGTC...GACCCTGCCTGTTCTAGAAGATTTGGTAGCAGCCCTACTGATTTCAGTGCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCACGTGCCCATGAGGCATaGTCTGGTCGAGGTGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISRAHEA*SGRGGL Trigger: TAGCCCACCTCGACCAGAGCATGCCTCATGGGCACG...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGGTCTACACCACGGCGTaGCTCACGCAGATACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQVYTTA*LTQILQ Trigger: CTGGAGTATCTGCGTGAGGCACGCCGTGGTGTAGAC...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGACAGAGCCCAGCACCTaGAGCAGGGACTTGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQTEPST*SRDLTL Trigger: CAGTGTCAAGTCCCTGCTGCAGGTGCTGGGCTCTGT...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGGTTGGGCTGTGTGCATaGCGCAGGAGTAATTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQVGLCA*RRSNSP Trigger: GGGGGAATTACTCCTGCGGCATGCACACAGCCCAAC...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCGGGGCCAGGCTCCTCTaGAGGGCTGGGCCTTCGACT | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSGARLL*RAGPST Trigger: AGTCGAAGGCCCAGCCCTGCAGAGGAGCCTGGCCCC...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000118726.8 ENSMUST00000211549.2 |
||
| CDS-3UTR CCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCACAGAGCCTCTCGAACTaGCCCATGCCGCAACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISQSLSN*PMPQQR Trigger: CCTCTGTTGCGGCATGGGCCAGTTCGAGAGGCTCTG...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCTTCATCCAGTGCTaGACTACTGGGCACAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISAFIQC*TTGHRA Trigger: CGCCCTGTGCCCAGTAGTCCAGCACTGGATGAAGGC...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CAGTCCAGCTTGCCACGGGCAATGAGGTACTTCTTGGCTTTGGATAGCAGAGCAACACACACGCACAGTTaGCTGAGAAGTAGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSSLPRAMRYFLALDSRATHTHS*LRSSTR Trigger: CCTGGTGCTACTTCTCAGCCAACTGTGCGTGTGTGT...TGCTCTGCTATCCAAAGCCAAGAAGTACCTCATTGCCCGTGGCAAGCTGGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR CCA 90 bp | CATCAGTATCTGCTGATACCCATGAAGTTGCTGATGTACCTCCACCTGTCCCAGAGCAGCTCCAGGCTCTaGGGGTGGCTGCAAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HQYLLIPMKLLMYLHLSQSSSRL*GWLQEE Trigger: TTCTTCTTGCAGCCACCCCCAGAGCCTGGAGCTGCT...CTGGGACAGGTGGAGGTACATCAGCAACTTCATGGGTATCAGCAGATACTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GGAGAGACGAAAGAAGAGAGCGTCTTTGTGCTGTTTAAAGACAGGGCAGGGCAGAAAGAGGAGAAGACGTaGAGCAGCTCCAGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GETKEESVFVLFKDRAGQKEEKT*SSSRLW Trigger: CCAGAGCCTGGAGCTGCTCCACGTCTTCTCCTCTTT...CTGCCCTGCCCTGTCTTTAAACAGCACAAAGACGCTCTCTTCTTTCGTCTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CACGCACAGCTGGCTTCTGGCTTAGCATCACATGGTTACATGGGACAAGATACCAGGGTGCCTTCTCGATaGACAAAGGGGACAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: HAQLASGLASHGYMGQDTRVPSR*TKGTRR Trigger: TCGCCTTGTCCCCTTTGTCCATCGAGAAGGCACCCT...GGTATCTTGTCCCATGTAACCATGTGATGCTAAGCCAGAAGCCAGCTGTGCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR CCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCGGGCGCTCAGCCCTGTaGCCAGCACCGGGCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSGRSAL*PAPGRS Trigger: ACTTCTGCCCGGTGCTGGCCACAGGGCTGAGCGCCC...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGCGCACAGCTGGCTTCTaGCTTAGCATCACATGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQRTAGF*LSITWL Trigger: TAACCATGTGATGCTAAGCCAGAAGCCAGCTGTGCG...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCGGTGGGCTAGGGGCATaGTGCCGGCAGCAGCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSGGLGA*CRQQRG Trigger: ACCACGCTGCTGCCGGCACCATGCCCCTAGCCCACC...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCACTTCTTGGCTCCTTCTaGCCATGGCCCTGGTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISLLGSF*PWPWYP Trigger: GGGGTACCAGGGCCATGGCCAGAAGGAGCCAAGAAG...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CATCAGTATCTGCTGATACCCATGAAGTTGCTGATGTACCTCCACCTGTCCCAGCCAGACGAACCTTCTTaGCTCCTTCTGGCCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HQYLLIPMKLLMYLHLSQPDEPS*LLLAMA Trigger: GGCCATGGCCAGAAGGAGCCAAGAAGGTTCGTCTGG...CTGGGACAGGTGGAGGTACATCAGCAACTTCATGGGTATCAGCAGATACTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCACCATCTCGCCCAGGTTaGAGAACCTGCACCGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISPSRPG*RTCTAC Trigger: ACAGGCGGTGCAGGTTCTCCAACCTGGGCGAGATGG...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGTGACAGCATGGGCCTaGGAGATGGCAGCCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISVTAWA*EMAANS Trigger: GGAGTTGGCTGCCATCTCCCAGGCCCATGCTGTCAC...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| 3UTR CAA 72 bp | ATTTATAGGCTGAGAATCCCTGGGATGATGATGATGTaGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IYRLRIPGMMMM*LLLLLLLLLLL Trigger: CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACATCATCATCATCCCAGGGATTCTCAGCCTATAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGACACGCACAGTTGGCTaGGAAGTAGCACCAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQTRTVG*EVAPGL Trigger: AAGGCCTGGTGCTACTTCTCAGCCAACTGTGCGTGT...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AAGGGCACTGAAATCAGTAGGGCTGCTACCAAATCTTCTAGAACAGGCAGGGTCACACGCACAGTTGGCTaGGAAGTAGCACCAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGTEISRAATKSSRTGRVTRTVG*EVAPGL Trigger: AAGGCCTGGTGCTACTTCTCAGCCAACTGTGCGTGT...GACCCTGCCTGTTCTAGAAGATTTGGTAGCAGCCCTACTGATTTCAGTGCCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAAGTGGGGCTCCCATCTaGCAGAGCCATGAGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISSGAPI*QSHEQK Trigger: CTTCTGCTCATGGCTCTGTCAGATGGGAGCCCCACT...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCACTCAAGGGAACTCATaGAGAGTGCAAGGGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISATQGNS*RVQGQA Trigger: TGCCTGCCCTTGCACTCTTCATGAGTTCCCTTGAGT...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGGGTGAGCTACCTGAATaGCTGCATTGCAGAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQGELPE*LHCRTQ Trigger: TTGAGTTCTGCAATGCAGTCATTCAGGTAGCTCACC...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCCCCACCTCGTGCCCATaGGGCATGCTCTGGTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSPTSCP*GMLWSR Trigger: CCTCGACCAGAGCATGCCTCATGGGCACGAGGTGGG...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000048079.14 ENSMUST00000118726.8 |
||
| CDS-3UTR TCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGGCTTGCCACGGGCAATaGGGTACTTCTTGGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQACHGQ*GTSWLW Trigger: CCAAAGCCAAGAAGTACCTCATTGCCCGTGGCAAGC...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | GGCTATCATGAAACCCTATCATCAGTGTTTTCACCAAAGAGAAAAATGGCCCTGAGGGCCTCGTGCCCATaGGGCATGCTCTGGTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GYHETLSSVFSPKRKMALRASCP*GMLWSR Trigger: CCTCGACCAGAGCATGCCTCATGGGCACGAGGCCCT...CAGGGCCATTTTTCTCTTTGGTGAAAACACTGATGATAGGGTTTCATGATAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCGCTGCCCGAGGGCCTTaGCGCTCCAGGATTCGTACC | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSAARGP*RSRIRT Trigger: GGTACGAATCCTGGAGCGGCAAGGCCCTCGGGCAGC...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGCACCTCCAGTAGCTaGCCGAGGGCCTTGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSCTSSS*PRALPL Trigger: GAGCGGCAAGGCCCTCGGGCAGCTACTGGAGGTGCA...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCATCTCGAACTGGCCCATaGCGCAACAGAGGTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISSRTGP*RNRGWR Trigger: TCGCCAACCTCTGTTGCGGCATGGGCCAGTTCGAGA...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AACTGGGTTAGACCTAGCCTTAGCATCATATCAACTCTGGCCCCCACATCAGTATCTCGAACTGGCCCATaGCGCAACAGAGGTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: NWVRPSLSIISTLAPTSVSRTGP*RNRGWR Trigger: TCGCCAACCTCTGTTGCGGCATGGGCCAGTTCGAGA...TACTGATGTGGGGGCCAGAGTTGATATGATGCTAAGGCTAGGTCTAACCCAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | ATAGACGGAGTTCTGCAGCATGTTCTCGAGTTTGGCAAAGAGCACAGCCATGAACAGGCCTTCATCCAGTaGTGGACTACTGGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: IDGVLQHVLEFGKEHSHEQAFIQ*WTTGHR Trigger: CCTGTGCCCAGTAGTCCAGCACTGGATGAAGGCCTG...TTCATGGCTGTGCTCTTTGCCAAACTCGAGAACATGCTGCAGAACTCCGTCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGGCTCTGGGGGTGGCTaGAAGAAGAACTCGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISGSGGG*KKNSSS Trigger: ACTGCTCGAGTTCTTCTTGCAGCCACCCCCAGAGCC...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTCGTGCCCATGAGGCATaGTCTGGTCGAGGTGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWIRAHEA*SGRGGL Trigger: TAGCCCACCTCGACCAGAGCATGCCTCATGGGCACG...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGTTGGGCTGTGTGCATaGCGCAGGAGTAATTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISVGLCA*RRSNSP Trigger: GGGGGAATTACTCCTGCGGCATGCACACAGCCCAAC...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGACACACACGCACAGTTaGCTGAGAAGTAGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQTHTHS*LRSSTR Trigger: CCTGGTGCTACTTCTCAGCCAACTGTGCGTGTGTGT...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TGTCATCTGCATTTGCTTCTCAGTCAGAACTTCTTCTATACTGCAGAGGTACAGGCATCACGGGCCTGCTaGCCCAGGGTGCCTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: CHLHLLLSQNFFYTAEVQASRAC*PRVPSR Trigger: TCGAGAAGGCACCCTGGGCCAGCAGGCCCGTGATGC...CTGTACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAAGCAAATGCAGATGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTCCAGACGAGATGGTGTaGAGGGGCGGGGCACTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWIPDEMV*RGGALL Trigger: TAACAGTGCCCCGCCCCTCCACACCATCTCGTCTGG...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCCAGAGCCAGACGAGATaGTGTGGAGGGGCGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSQSQTR*CGGAGH Trigger: GTGCCCCGCCCCTCCACACCATCTCGTCTGGCTCTG...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGACTAGGGCTGGAAGTTaGAGATGCAGTAAGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQTRAGS*RCSKPW Trigger: CCAGGGCTTACTGCATCTCCAACTTCCAGCCCTAGT...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 ENSMUST00000211549.2 |
||
| CDS-3UTR CCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCACTAGGGCTGGAAGTTaGAGATGCAGTAAGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISATRAGS*RCSKPW Trigger: CCAGGGCTTACTGCATCTCCAACTTCCAGCCCTAGT...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 ENSMUST00000211549.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTGGCTCCTTCTGGCCATaGCCCTGGTACCCCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWIGSFWP*PWYPIE Trigger: CTCAATGGGGTACCAGGGCCATGGCCAGAAGGAGCC...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTCTTCTTGGCTCCTTCTaGCCATGGCCCTGGTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWILLGSF*PWPWYP Trigger: GGGGTACCAGGGCCATGGCCAGAAGGAGCCAAGAAG...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGGGTACTTCTTGGCTTTaGATAGCAGAGCAGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQGTSWL*IAEQGS Trigger: ACTTCCCTGCTCTGCTATCCAAAGCCAAGAAGTACC...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCCGAAGAGCCTCACCTTaGCGCTCAGAAGCCCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSRRASP*RSEAPP Trigger: GGGCGGGGCTTCTGAGCGCCAAGGTGAGGCTCTTCG...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCGCCCAAAGCCTGAGATaGGAGGAAGAGATACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISAAQSLR*EEEIPP Trigger: AGGAGGTATCTCTTCCTCCCATCTCAGGCTTTGGGC...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCCAAAGCCTGAGATaGGAGGAAGAGATACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQAQSLR*EEEIPP Trigger: AGGAGGTATCTCTTCCTCCCATCTCAGGCTTTGGGC...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCGAAGAATCAACACTTaGGCTTCCAGGGCCTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQRRINT*ASRASC Trigger: GCACGAGGCCCTGGAAGCCCAAGTGTTGATTCTTCG...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGAAGAACTCGAGCAGTaGAGGCTCCCGAGCAACACA | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISEELEQ*RLPSNT Trigger: TGTGTTGCTCGGGAGCCTTCACTGCTCGAGTTCTTC...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCATCTGACAGAGCCATaGGCAGAAGTAGAGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISAHLTEP*AEVEHH Trigger: GTGATGCTCTACTTCTGCTCATGGCTCTGTCAGATG...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTAGTGGGGCTCCCATCTaGCAGAGCCATGAGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWISGAPI*QSHEQK Trigger: CTTCTGCTCATGGCTCTGTCAGATGGGAGCCCCACT...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAAATCTTTCGAGGCAGTaGGGAGTACAGGGCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISNLSRQ*GVQGAQ Trigger: CTGAGCGCCCTGTACTCCTCACTGCCTCGAAAGATT...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGATGGGACAAGATACCTaGGAACCAGCTGCAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQMGQDT*EPAAAE Trigger: TTCTGCTGCAGCTGGTTCTCAGGTATCTTGTCCCAT...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | CCCTTGTCATCTGCATTTGCTTCTCAGTCAGAACTTCTTCTATACTGCAGAGGTCCTGCAGCAGGGACTTaGCACTGGGCTGGAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: PLSSAFASQSELLLYCRGPAAGT*HWAGRP Trigger: TGGTCTTCCAGCCCAGTGTCAAGTCCCTGCTGCAGG...ACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAAGCAAATGCAGATGACAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCCCTTGTGGTACACGGTaGCCAGGGACCCGGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPPCGTR*PGTREA Trigger: GGCCTCCCGGGTCCCTGGGCACCGTGTACCACAAGG...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAAGCACTGAGATCATCTaGACCTCCAGTAGCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISSTEII*TSSSCP Trigger: CGGGCAGCTACTGGAGGTGCAGATGATCTCAGTGCT...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCCCAAACTCATCCCATTaGAACTGCCATGTCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: PNIKRSPCPGFQPRPQKAPNSSH*NCHVNT Trigger: AGTGTTGACATGGCAGTTGCAATGGGATGAGTTTGG...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CCCTTGTCATCTGCATTTGCTTCTCAGTCAGAACTTCTTCTATACTGCAGAGGTCCTGCTGGCCCAGGGTaGCTTCTCGATGGACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSSAFASQSELLLYCRGPAGPG*LLDGQR Trigger: CCTTTGTCCATCGAGAAGGCACCCTGGGCCAGCAGG...ACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAAGCAAATGCAGATGACAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAGCTACCTGAATGACTaGATTGCAGAACTCAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQSYLND*IAELKG Trigger: TCCCTTGAGTTCTGCAATGCAGTCATTCAGGTAGCT...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCCACAGAGGTCTTGTaGAGGGCAGGGCCCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWISTEVL*RAGPMT Trigger: TGTCATGGGCCCTGCCCTGCACAAGACCTCTGTGGA...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTGACTCAGAGAGACCATaGAGAGCCGGGAGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWIDSERP*RAGSCC Trigger: GCAGCAACTCCCGGCTCTGCATGGTCTCTCTGAGTC...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCACCTAGGCTCTGTTaGCGAAGAAACAGAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQPPRLC*RRNRAR Trigger: TCTGGCTCTGTTTCTTCGGCAACAGAGCCTAGGTGG...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTGTCTACACCACGGCGTaGCTCACGCAGATACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWIVYTTA*LTQILQ Trigger: CTGGAGTATCTGCGTGAGGCACGCCGTGGTGTAGAC...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAGGGCACTGAAATCAGTAGGGCTGCTACCAAATCTTCTAGAACAGGCAGGGTCAGCTCCTGGAGCTCTTaGCCAAAGCTCTCTAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KGTEISRAATKSSRTGRVSSWSS*PKLSSP Trigger: AGGACTAGAGAGCTTTGGGCAAGAGCTCCAGGAGCT...GACCCTGCCTGTTCTAGAAGATTTGGTAGCAGCCCTACTGATTTCAGTGCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAAAAGAGGAGAAGACGTaGAGCAGCTCCAGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISKEEKT*SSSRLW Trigger: CCAGAGCCTGGAGCTGCTCCACGTCTTCTCCTCTTT...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CCCTTGTCATCTGCATTTGCTTCTCAGTCAGAACTTCTTCTATACTGCAGAGGTTGTAGCGGCCCACAGTaGGGCTCCCATCTGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLSSAFASQSELLLYCRGCSGPQ*GSHLTE Trigger: CTCTGTCAGATGGGAGCCCCACTGTGGGCCGCTACA...ACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAAGCAAATGCAGATGACAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGCGCACAGCTGGCTTCTaGCTTAGCATCACATGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQRTAGF*LSITWL Trigger: TAACCATGTGATGCTAAGCCAGAAGCCAGCTGTGCG...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGGTGGGCTAGGGGCATaGTGCCGGCAGCAGCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPGGLGA*CRQQRG Trigger: ACCACGCTGCTGCCGGCACCATGCCCCTAGCCCACC...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGACTAGGGCTGGAAGTTaGAGATGCAGTAAGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQTRAGS*RCSKPW Trigger: CCAGGGCTTACTGCATCTCCAACTTCCAGCCCTAGT...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 ENSMUST00000211549.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGCACTGAAATCAGTAGGGCTGCTACCAAATCTTCTAGAACAGGCAGGGTCACTAGGGCTGGAAGTTaGAGATGCAGTAAGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KGTEISRAATKSSRTGRVTRAGS*RCSKPW Trigger: CCAGGGCTTACTGCATCTCCAACTTCCAGCCCTAGT...GACCCTGCCTGTTCTAGAAGATTTGGTAGCAGCCCTACTGATTTCAGTGCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCCCGCCTGTCGGGCCCTaGTTGGGCTGTGTGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPPPVGP*LGCVHA Trigger: GGCATGCACACAGCCCAACCAGGGCCCGACAGGCGG...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGGCCCAAAGCCTGAGATaGGAGGAAGAGATACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQAQSLR*EEEIPP Trigger: AGGAGGTATCTCTTCCTCCCATCTCAGGCTTTGGGC...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCACGAAGAATCAACACTTaGGCTTCCAGGGCCTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISRRINT*ASRASC Trigger: GCACGAGGCCCTGGAAGCCCAAGTGTTGATTCTTCG...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCGCACCAGTGAAGGGCTaGCTCGGCAGCTGGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSAPVKG*LGSWWR Trigger: TCTCCACCAGCTGCCGAGCCAGCCCTTCACTGGTGC...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000074686.10 |
||
| CDS-3UTR TCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGGTTTCTCACAGCACTaGGATCATCTGCACCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISGFSQH*DHLHLQ Trigger: CTGGAGGTGCAGATGATCTCAGTGCTGTGAGAAACC...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTAATCTTTCGAGGCAGTaGGGAGTACAGGGCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWINLSRQ*GVQGAQ Trigger: CTGAGCGCCCTGTACTCCTCACTGCCTCGAAAGATT...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTGCTTGCCACGGGCAATaGGGTACTTCTTGGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWIACHGQ*GTSWLW Trigger: CCAAAGCCAAGAAGTACCTCATTGCCCGTGGCAAGC...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCAGTAGACAGCATTCTTaGCTCGAAGAGCCTCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISASRQHS*LEEPHL Trigger: AAGGTGAGGCTCTTCGAGTCAAGAATGCTGTCTACT...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | TCAGGGTTTGTCTTCGGAGTTCGACAGCGACGAATGAAGCTGAGGCAAGAGATGAGTAGACAGCATTCTTaGCTCGAAGAGCCTCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGFVFGVRQRRMKLRQEMSRQHS*LEEPHL Trigger: AAGGTGAGGCTCTTCGAGTCAAGAATGCTGTCTACT...CATCTCTTGCCTCAGCTTCATTCGTCGCTGTCGAACTCCGAAGACAAACCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGAGATACCTCCTCTaGAGTATCCAACAAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQKRYLL*SIQQER Trigger: CCTTTCTTGTTGGATACTTCAGAGGAGGTATCTCTT...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCAGGGCCTCGTGCCCATaGGGCATGCTCTGGTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPRASCP*GMLWSR Trigger: CCTCGACCAGAGCATGCCTCATGGGCACGAGGCCCT...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGGCTGCCCGAGGGCCTTaGCGCTCCAGGATTCGTACC | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVAARGP*RSRIRT Trigger: GGTACGAATCCTGGAGCGGCAAGGCCCTCGGGCAGC...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAAGCTCCTGGAGCTCTTaGCCAAAGCTCTCTAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISSSWSS*PKLSSP Trigger: AGGACTAGAGAGCTTTGGGCAAGAGCTCCAGGAGCT...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCCACCATTGCTCAATaGCACCTCCAGCTCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWISTIAQ*HLQLLE Trigger: CTCCAGGAGCTGGAGGTGGCATTGAGCAATGGTGGA...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCCAGAGCCTCTCGAACTaGCCCATGCCGCAACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSQSLSN*PMPQQR Trigger: CCTCTGTTGCGGCATGGGCCAGTTCGAGAGGCTCTG...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGCCAGTGCTGGACTACTaGGCACAGGGCGGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVPVLDY*AQGGHR Trigger: CCTGTGGCCGCCCTGTGCCCAGTAGTCCAGCACTGG...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCGCCTTCATCCAGTGCTaGACTACTGGGCACAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSAFIQC*TTGHRA Trigger: CGCCCTGTGCCCAGTAGTCCAGCACTGGATGAAGGC...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAACACACACGCACAGTTaGCTGAGAAGTAGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISTHTHS*LRSSTR Trigger: CCTGGTGCTACTTCTCAGCCAACTGTGCGTGTGTGT...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTAGGGTGCCTTCTCGATaGACAAAGGGGACAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWIRVPSR*TKGTRR Trigger: TCGCCTTGTCCCCTTTGTCCATCGAGAAGGCACCCT...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGGCATCACGGGCCTGCTaGCCCAGGGTGCCTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVASRAC*PRVPSR Trigger: TCGAGAAGGCACCCTGGGCCAGCAGGCCCGTGATGC...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGTAGCGGCCCACAGTaGGGCTCCCATCTGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSCSGPQ*GSHLTE Trigger: CTCTGTCAGATGGGAGCCCCACTGTGGGCCGCTACA...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCCATCACATGGTTACATaGGACAAGATACCTGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PNIKRSPCPGFQPRPQKAHHMVT*DKIPEN Trigger: GTTCTCAGGTATCTTGTCCCATGTAACCATGTGATG...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGCATCACATGGTTACATaGGACAAGATACCTGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQHHMVT*DKIPEN Trigger: GTTCTCAGGTATCTTGTCCCATGTAACCATGTGATG...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCTGTGGTACCAATCGTaGCACCAGACGAACCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQLWYQS*HQTNLL Trigger: AAGAAGGTTCGTCTGGTGCCACGATTGGTACCACAG...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCTTTCTACTTGTCTCTATCTGCCTCTTATTCCACATCAGTGTTCCTCATCGCAGGGAAGTCCTCCTaGGAGGCCGCAAAGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CPFYLSLSASYSTSVFLIAGKSS*EAAKLS Trigger: TGAGAGCTTTGCGGCCTCCCAGGAGGACTTCCCTGC...GATGAGGAACACTGATGTGGAATAAGAGGCAGATAGAGACAAGTAGAAAGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCGGTACTTCTTGGCTTTaGATAGCAGAGCAGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISAGTSWL*IAEQGS Trigger: ACTTCCCTGCTCTGCTATCCAAAGCCAAGAAGTACC...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| 3UTR CAA 72 bp | TCTCCTGAAAGCAGGAGCAAATCTACTGTCAAGCACTaGCTCAAAGCGCTGGCACTGCCGTGCATTAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SPESRSKSTVKH*LKALALPCIST Trigger: AGTACTAATGCACGGCAGTGCCAGCGCTTTGAGCAAGTGCTTGACAGTAGATTTGCTCCTGCTTTCAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTGGTTTCTCACAGCACTaGGATCATCTGCACCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWIGFSQH*DHLHLQ Trigger: CTGGAGGTGCAGATGATCTCAGTGCTGTGAGAAACC...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCACATCTGACAGAGCCATaGGCAGAAGTAGAGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISHLTEP*AEVEHH Trigger: GTGATGCTCTACTTCTGCTCATGGCTCTGTCAGATG...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCAGTGGGGCTCCCATCTaGCAGAGCCATGAGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSSGAPI*QSHEQK Trigger: CTTCTGCTCATGGCTCTGTCAGATGGGAGCCCCACT...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | TCATCTAAGATAATACATTTAGTATTGGACACACACCCTAGCACTGAAGAGTGCGCCCTGGTACCCCATTaGGCTGGGGTGGGAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSKIIHLVLDTHPSTEECALVPH*AGVGVG Trigger: ACCTACTCCCACCCCAGCTCAATGGGGTACCAGGGC...GCACTCTTCAGTGCTAGGGTGTGTGTCCAATACTAAATGTATTATCTTAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGGCTCAGGAGGGCAGGTaGAGCTCTCGTAGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVAQEGR*SSRRPP Trigger: AGGAGGCCTACGAGAGCTTCACCTGCCCTCCTGAGC...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCGAAACTCAGGGAAAATaGCTGCACAGTAGACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISAETQGK*LHSRQH Trigger: ATGCTGTCTACTGTGCAGTCATTTTCCCTGAGTTTC...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGAAACTCAGGGAAAATaGCTGCACAGTAGACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQETQGK*LHSRQH Trigger: ATGCTGTCTACTGTGCAGTCATTTTCCCTGAGTTTC...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTCTCGAACTGGCCCATaGCGCAACAGAGGTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSSRTGP*RNRGWR Trigger: TCGCCAACCTCTGTTGCGGCATGGGCCAGTTCGAGA...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCCAGGCCTTCATCCAGTaGTGGACTACTGGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSQAFIQ*WTTGHR Trigger: CCTGTGCCCAGTAGTCCAGCACTGGATGAAGGCCTG...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCGGCTCTGGGGGTGGCTaGAAGAAGAACTCGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSGSGGG*KKNSSS Trigger: ACTGCTCGAGTTCTTCTTGCAGCCACCCCCAGAGCC...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCAGAGCATCACGGGCCTaGTGGCCCAGGGTGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPRASRA*WPRVPS Trigger: AGAAGGCACCCTGGGCCAGCAGGCCCGTGATGCTCT...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCCGGCGCAAGCAGTaGCAATCATCCCCCGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVSRRKQ*QSSPGT Trigger: GGTTCCGGGGGATGATTGGCACTGCTTGCGCCGGGA...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCTCCCGGCGCAAGCAGTaGCAATCATCCCCCGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPSRRKQ*QSSPGT Trigger: GGTTCCGGGGGATGATTGGCACTGCTTGCGCCGGGA...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCAGCTACCTGAATGACTaGATTGCAGAACTCAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISASYLND*IAELKG Trigger: TCCCTTGAGTTCTGCAATGCAGTCATTCAGGTAGCT...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TGTCCTTTCTACTTGTCTCTATCTGCCTCTTATTCCACATCAGTGTTCCTCATCTCCACAGAGGTCTTGTaGAGGGCAGGGCCCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: CPFYLSLSASYSTSVFLISTEVL*RAGPMT Trigger: TGTCATGGGCCCTGCCCTGCACAAGACCTCTGTGGA...GATGAGGAACACTGATGTGGAATAAGAGGCAGATAGAGACAAGTAGAAAGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCGACTCAGAGAGACCATaGAGAGCCGGGAGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSDSERP*RAGSCC Trigger: GCAGCAACTCCCGGCTCTGCATGGTCTCTCTGAGTC...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGAGAAACTTGTCAGCTaGTCGTCCATAAAGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQEKLVS*SSIKIH Trigger: GTGGATCTTTATGGACGAGCAGCTGACAAGTTTCTC...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTAGCTCCTGGAGCTCTTaGCCAAAGCTCTCTAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWISSWSS*PKLSSP Trigger: AGGACTAGAGAGCTTTGGGCAAGAGCTCCAGGAGCT...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCGTTGGGCTGTGTGCATaGCGCAGGAGTAATTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSVGLCA*RRSNSP Trigger: GGGGGAATTACTCCTGCGGCATGCACACAGCCCAAC...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GGCTATCATGAAACCCTATCATCAGTGTTTTCACCAAAGAGAAAAATGGCCCTGTGCCGCAACAGAGGTTaGCGAGCTTCGCTCACTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GYHETLSSVFSPKRKMALCRNRG*RASLTS Trigger: GCTAGTGAGCGAAGCTCGCCAACCTCTGTTGCGGCA...CAGGGCCATTTTTCTCTTTGGTGAAAACACTGATGATAGGGTTTCATGATAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCAGCAGCTCCAGGCTCTaGGGGTGGCTGCAAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSSSSRL*GWLQEE Trigger: TTCTTCTTGCAGCCACCCCCAGAGCCTGGAGCTGCT...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AAGGATAAGGTAGGTAAAGTGAGAGGGCTAAGGGAAAAGTGGCAAAGTATGACCAGGGTGCCTTCTCGATaGACAAAGGGGACAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: KDKVGKVRGLREKWQSMTRVPSR*TKGTRR Trigger: TCGCCTTGTCCCCTTTGTCCATCGAGAAGGCACCCT...GGTCATACTTTGCCACTTTTCCCTTAGCCCTCTCACTTTACCTACCTTATCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCACGCACAGCTGGCTTCTaGCTTAGCATCACATGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISRTAGF*LSITWL Trigger: TAACCATGTGATGCTAAGCCAGAAGCCAGCTGTGCG...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCATGCTCTGGTCGAGGTaGGCTAGGGGCATGGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPMLWSR*ARGMVP Trigger: CGGCACCATGCCCCTAGCCCACCTCGACCAGAGCAT...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGATGCTCTGGTCGAGGTaGGCTAGGGGCATGGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVMLWSR*ARGMVP Trigger: CGGCACCATGCCCCTAGCCCACCTCGACCAGAGCAT...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTACTAGGGCTGGAAGTTaGAGATGCAGTAAGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWITRAGS*RCSKPW Trigger: CCAGGGCTTACTGCATCTCCAACTTCCAGCCCTAGT...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 ENSMUST00000211549.2 |
||
| CDS-3UTR CCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCCCAGACGAACCTTCTTaGCTCCTTCTGGCCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSPDEPS*LLLAMA Trigger: GGCCATGGCCAGAAGGAGCCAAGAAGGTTCGTCTGG...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCACTGTGGTACCAATCGTaGCACCAGACGAACCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISLWYQS*HQTNLL Trigger: AAGAAGGTTCGTCTGGTGCCACGATTGGTACCACAG...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCTGGCTCGGCAGCTGGTaGAGAGTCCGCAAAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPWLGSW*RVRKGL Trigger: CAGCCCTTTGCGGACTCTCCACCAGCTGCCGAGCCA...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TACTTAACTACTATTCACATTTTTGTTCCGTCCATTAGCCCAAGCTACATTGGTGGCTGGCTCGGCAGCTaGTGGAGAGTCCGCAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YLTTIHIFVPSISPSYIGGWLGS*WRVRKG Trigger: CCCTTTGCGGACTCTCCACCAGCTGCCGAGCCAGCC...ACCAATGTAGCTTGGGCTAATGGACGGAACAAAAATGTGAATAGTAGTTAAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TACCAAAATTTGGCACAAAATAAGACATTAGATTCTTCTACAGGGAACTGGGAACCGCCTGTCGGGCCCTaGTTGGGCTGTGTGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: YQNLAQNKTLDSSTGNWEPPVGP*LGCVHA Trigger: GGCATGCACACAGCCCAACCAGGGCCCGACAGGCGG...TTCCCAGTTCCCTGTAGAAGAATCTAATGTCTTATTTTGTGCCAAATTTTGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AAACTCAGGGAAAATGACTGCACAGTAGACAGCATTCTTGACTCGAAGAGCCTCCATCTGACAGAGCCATaGGCAGAAGTAGAGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: KLRENDCTVDSILDSKSLHLTEP*AEVEHH Trigger: GTGATGCTCTACTTCTGCTCATGGCTCTGTCAGATG...GAGGCTCTTCGAGTCAAGAATGCTGTCTACTGTGCAGTCATTTTCCCTGAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR TCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCAATCTTTCGAGGCAGTaGGGAGTACAGGGCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSNLSRQ*GVQGAQ Trigger: CTGAGCGCCCTGTACTCCTCACTGCCTCGAAAGATT...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGGTGAGCTACCTGAATaGCTGCATTGCAGAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISGELPE*LHCRTQ Trigger: TTGAGTTCTGCAATGCAGTCATTCAGGTAGCTCACC...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGGGCTTCCAGGGCCCGTaGTGTCCTCCCTTCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKEGFQGP*CPPFSL Trigger: CAGGGAGAAGGGAGGACATCACGGGCCCTGGAAGCC...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048079.14 ENSMUST00000118726.8 |
||
| CDS-3UTR TCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCAAGAGATACCTCCTCTaGAGTATCCAACAAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISAKRYLL*SIQQER Trigger: CCTTTCTTGTTGGATACTTCAGAGGAGGTATCTCTT...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGAAGAGATACCTCCTCTaGAGTATCCAACAAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQKRYLL*SIQQER Trigger: CCTTTCTTGTTGGATACTTCAGAGGAGGTATCTCTT...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCCCCGGGAGGCCAGCCTaGTTAACCAGTTCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSPGRPA*LTSSSS Trigger: AGAAGATGAACTGGTTAAGCAGGCTGGCCTCCCGGG...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TACCAAAATTTGGCACAAAATAAGACATTAGATTCTTCTACAGGGAACTGGGAAGCTGCCCGAGGGCCTTaGCGCTCCAGGATTCGTACC | + |
|
Preference number: 4 (lower is better) Translates to: YQNLAQNKTLDSSTGNWEAARGP*RSRIRT Trigger: GGTACGAATCCTGGAGCGGCAAGGCCCTCGGGCAGC...TTCCCAGTTCCCTGTAGAAGAATCTAATGTCTTATTTTGTGCCAAATTTTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGTGCACCTCCAGTAGCTaGCCGAGGGCCTTGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKECTSSS*PRALPL Trigger: GAGCGGCAAGGCCCTCGGGCAGCTACTGGAGGTGCA...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCAAACTCATCCCATTaGAACTGCCATGTCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQPNSSH*NCHVNT Trigger: AGTGTTGACATGGCAGTTGCAATGGGATGAGTTTGG...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGAGCTACCTGAATGACTaGATTGCAGAACTCAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQSYLND*IAELKG Trigger: TCCCTTGAGTTCTGCAATGCAGTCATTCAGGTAGCT...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCATGGTGTGGGTATCATaGCGATGTAACAACAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISAMVWVS*RCNNRN Trigger: ATTCCTGTTGTTACATCGGCATGATACCCACACCAT...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGGAGAAACTTGTCAGCTaGTCGTCCATAAAGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQEKLVS*SSIKIH Trigger: GTGGATCTTTATGGACGAGCAGCTGACAAGTTTCTC...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCTCAGGGAAAATGACTaGACAGTAGACAGCATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISALREND*TVDSIL Trigger: AAGAATGCTGTCTACTGTGCAGTCATTTTCCCTGAG...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCAGTGCTGGACTACTaGGCACAGGGCGGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKEPVLDY*AQGGHR Trigger: CCTGTGGCCGCCCTGTGCCCAGTAGTCCAGCACTGG...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGGCCTTCATCCAGTGCTaGACTACTGGGCACAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVAFIQC*TTGHRA Trigger: CGCCCTGTGCCCAGTAGTCCAGCACTGGATGAAGGC...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGCCTTCATCCAGTGCTaGACTACTGGGCACAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPAFIQC*TTGHRA Trigger: CGCCCTGTGCCCAGTAGTCCAGCACTGGATGAAGGC...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCTGTAGCGGCCCACAGTaGGGCTCCCATCTGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPCSGPQ*GSHLTE Trigger: CTCTGTCAGATGGGAGCCCCACTGTGGGCCGCTACA...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCATCACATGGTTACATaGGACAAGATACCTGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PFATASKHKKEPVSWISAHHMVT*DKIPEN Trigger: GTTCTCAGGTATCTTGTCCCATGTAACCATGTGATG...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGTGGCTTAGCATCACATaGTTACATGGGACAAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: FATASKHKKEPVSWISAQWLSIT*LHGTRY Trigger: GTATCTTGTCCCATGTAACCATGTGATGCTAAGCCA...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCCCAGACGAGATGGTGTaGAGGGGCGGGGCACTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPPDEMV*RGGALL Trigger: TAACAGTGCCCCGCCCCTCCACACCATCTCGTCTGG...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGCCAGACGAGATGGTGTaGAGGGGCGGGGCACTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVPDEMV*RGGALL Trigger: TAACAGTGCCCCGCCCCTCCACACCATCTCGTCTGG...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCAGAGCCAGACGAGATaGTGTGGAGGGGCGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKEQSQTR*CGGAGH Trigger: GTGCCCCGCCCCTCCACACCATCTCGTCTGGCTCTG...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGGGCTCCTTCTGGCCATaGCCCTGGTACCCCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVGSFWP*PWYPIE Trigger: CTCAATGGGGTACCAGGGCCATGGCCAGAAGGAGCC...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGCCACCTCCAGCTCCTaGAGCTCTTGCCCAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPATSSS*SSCPKL Trigger: GAGCTTTGGGCAAGAGCTCCAGGAGCTGGAGGTGGC...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGGGGCCAGTGAAGGGCTaGCTCGGCAGCTGGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKEGPVKG*LGSWWR Trigger: TCTCCACCAGCTGCCGAGCCAGCCCTTCACTGGCCC...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000048079.14 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGGCAGGGAAGTCCTCCTaGGAGGCCGCAAAGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVAGKSS*EAAKLS Trigger: TGAGAGCTTTGCGGCCTCCCAGGAGGACTTCCCTGC...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCTGTCGGGCCCTGGTTaGGCTGTGTGCATGCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKELSGPG*AVCMPQ Trigger: CTGCGGCATGCACACAGCCCAACCAGGGCCCGACAG...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TACCAAAATTTGGCACAAAATAAGACATTAGATTCTTCTACAGGGAACTGGGAACTGTCGGGCCCTGGTTaGGCTGTGTGCATGCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YQNLAQNKTLDSSTGNWELSGPG*AVCMPQ Trigger: CTGCGGCATGCACACAGCCCAACCAGGGCCCGACAG...TTCCCAGTTCCCTGTAGAAGAATCTAATGTCTTATTTTGTGCCAAATTTTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGCCATCTCGCCCAGGTTaGAGAACCTGCACCGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVPSRPG*RTCTAC Trigger: ACAGGCGGTGCAGGTTCTCCAACCTGGGCGAGATGG...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCCCATCTCGCCCAGGTTaGAGAACCTGCACCGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPPSRPG*RTCTAC Trigger: ACAGGCGGTGCAGGTTCTCCAACCTGGGCGAGATGG...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TACCAAAATTTGGCACAAAATAAGACATTAGATTCTTCTACAGGGAACTGGGAACGAAGAGCCTCACCTTaGCGCTCAGAAGCCCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YQNLAQNKTLDSSTGNWERRASP*RSEAPP Trigger: GGGCGGGGCTTCTGAGCGCCAAGGTGAGGCTCTTCG...TTCCCAGTTCCCTGTAGAAGAATCTAATGTCTTATTTTGTGCCAAATTTTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGACAGCATGGGCCTaGGAGATGGCAGCCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPVTAWA*EMAANS Trigger: GGAGTTGGCTGCCATCTCCCAGGCCCATGCTGTCAC...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TGTCATCTGCATTTGCTTCTCAGTCAGAACTTCTTCTATACTGCAGAGGTACAGCGAAGAATCAACACTTaGGCTTCCAGGGCCTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CHLHLLLSQNFFYTAEVQRRINT*ASRASC Trigger: GCACGAGGCCCTGGAAGCCCAAGTGTTGATTCTTCG...CTGTACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAAGCAAATGCAGATGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCACTCAAGGGAACTCATaGAGAGTGCAAGGGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSTQGNS*RVQGQA Trigger: TGCCTGCCCTTGCACTCTTCATGAGTTCCCTTGAGT...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGGCCCTGGTACCCCATTaGGCTGGGGTGGGAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKEALVPH*AGVGVG Trigger: ACCTACTCCCACCCCAGCTCAATGGGGTACCAGGGC...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGGCTCAGGAGGGCAGGTaGAGCTCTCGTAGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKEAQEGR*SSRRPP Trigger: AGGAGGCCTACGAGAGCTTCACCTGCCCTCCTGAGC...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCCCGTCAGCAGGAAGTTaGCATAGACGGAGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSPSAGS*HRRSSA Trigger: TGCAGAACTCCGTCTATGTCAACTTCCTGCTGACGG...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTAGTAGACAGCATTCTTaGCTCGAAGAGCCTCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWISRQHS*LEEPHL Trigger: AAGGTGAGGCTCTTCGAGTCAAGAATGCTGTCTACT...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGAAACTCAGGGAAAATaGCTGCACAGTAGACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISETQGK*LHSRQH Trigger: ATGCTGTCTACTGTGCAGTCATTTTCCCTGAGTTTC...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TCATCTAAGATAATACATTTAGTATTGGACACACACCCTAGCACTGAAGAGTGCCAGGCCTTCATCCAGTaGTGGACTACTGGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSKIIHLVLDTHPSTEECQAFIQ*WTTGHR Trigger: CCTGTGCCCAGTAGTCCAGCACTGGATGAAGGCCTG...GCACTCTTCAGTGCTAGGGTGTGTGTCCAATACTAAATGTATTATCTTAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGGGCTCTGGGGGTGGCTaGAAGAAGAACTCGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVGSGGG*KKNSSS Trigger: ACTGCTCGAGTTCTTCTTGCAGCCACCCCCAGAGCC...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGTCCCGGCGCAAGCAGTaGCAATCATCCCCCGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKESRRKQ*QSSPGT Trigger: GGTTCCGGGGGATGATTGGCACTGCTTGCGCCGGGA...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AACTGGGTTAGACCTAGCCTTAGCATCATATCAACTCTGGCCCCCACATCAGTAGAGAAACTTGTCAGCTaGTCGTCCATAAAGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NWVRPSLSIISTLAPTSVEKLVS*SSIKIH Trigger: GTGGATCTTTATGGACGAGCAGCTGACAAGTTTCTC...TACTGATGTGGGGGCCAGAGTTGATATGATGCTAAGGCTAGGTCTAACCCAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCACAGAGCCCAGCACCTaGAGCAGGGACTTGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPTEPST*SRDLTL Trigger: CAGTGTCAAGTCCCTGCTGCAGGTGCTGGGCTCTGT...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGGTTGGGCTGTGTGCATaGCGCAGGAGTAATTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVVGLCA*RRSNSP Trigger: GGGGGAATTACTCCTGCGGCATGCACACAGCCCAAC...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | CATCAGTATCTGCTGATACCCATGAAGTTGCTGATGTACCTCCACCTGTCCCAGCTCAGGGAAAATGACTaGACAGTAGACAGCATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HQYLLIPMKLLMYLHLSQLREND*TVDSIL Trigger: AAGAATGCTGTCTACTGTGCAGTCATTTTCCCTGAG...CTGGGACAGGTGGAGGTACATCAGCAACTTCATGGGTATCAGCAGATACTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCTGCCGCAACAGAGGTTaGCGAGCTTCGCTCACTAGC | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPCRNRG*RASLTS Trigger: GCTAGTGAGCGAAGCTCGCCAACCTCTGTTGCGGCA...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCATCACATGGTTACATaGGACAAGATACCTGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQHHMVT*DKIPEN Trigger: GTTCTCAGGTATCTTGTCCCATGTAACCATGTGATG...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGTGGCTTAGCATCACATaGTTACATGGGACAAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQWLSIT*LHGTRY Trigger: GTATCTTGTCCCATGTAACCATGTGATGCTAAGCCA...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TACTTAACTACTATTCACATTTTTGTTCCGTCCATTAGCCCAAGCTACATTGGTCCAGACGAGATGGTGTaGAGGGGCGGGGCACTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: YLTTIHIFVPSISPSYIGPDEMV*RGGALL Trigger: TAACAGTGCCCCGCCCCTCCACACCATCTCGTCTGG...ACCAATGTAGCTTGGGCTAATGGACGGAACAAAAATGTGAATAGTAGTTAAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGCCAGACGAACCTTCTTaGCTCCTTCTGGCCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVPDEPS*LLLAMA Trigger: GGCCATGGCCAGAAGGAGCCAAGAAGGTTCGTCTGG...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | GAGACCAACTGCACTGCCTTTTGGACAGTTTTCCTGATAACACTTTCCTATCAGCTGTGGTACCAATCGTaGCACCAGACGAACCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ETNCTAFWTVFLITLSYQLWYQS*HQTNLL Trigger: AAGAAGGTTCGTCTGGTGCCACGATTGGTACCACAG...CTGATAGGAAAGTGTTATCAGGAAAACTGTCCAAAAGGCAGTGCAGTTGGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTGGTACTTCTTGGCTTTaGATAGCAGAGCAGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWIGTSWL*IAEQGS Trigger: ACTTCCCTGCTCTGCTATCCAAAGCCAAGAAGTACC...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCGCCCAAAGCCTGAGATaGGAGGAAGAGATACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSAQSLR*EEEIPP Trigger: AGGAGGTATCTCTTCCTCCCATCTCAGGCTTTGGGC...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCACCACCTGGGACCAATaGTTCTTGAAGACCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSTTWDQ*FLKTMR Trigger: CCTCATGGTCTTCAAGAATCATTGGTCCCAGGTGGT...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCCATCTGACAGAGCCATaGGCAGAAGTAGAGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSHLTEP*AEVEHH Trigger: GTGATGCTCTACTTCTGCTCATGGCTCTGTCAGATG...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGGCTTGCCACGGGCAATaGGGTACTTCTTGGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVACHGQ*GTSWLW Trigger: CCAAAGCCAAGAAGTACCTCATTGCCCGTGGCAAGC...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCCCCGGGAGGCCAGCCTaGTTAACCAGTTCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPPGRPA*LTSSSS Trigger: AGAAGATGAACTGGTTAAGCAGGCTGGCCTCCCGGG...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCAGCACTGAGATCATCTaGACCTCCAGTAGCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPSTEII*TSSSCP Trigger: CGGGCAGCTACTGGAGGTGCAGATGATCTCAGTGCT...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTCATCCCATTGCAACTaGCATGTCAACACTCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSSSHCN*HVNTRL Trigger: GAGCCGAGTGTTGACATGGCAGTTGCAATGGGATGA...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TGTCCTTTCTACTTGTCTCTATCTGCCTCTTATTCCACATCAGTGTTCCTCATCTCATCCCATTGCAACTaGCATGTCAACACTCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPFYLSLSASYSTSVFLISSHCN*HVNTRL Trigger: GAGCCGAGTGTTGACATGGCAGTTGCAATGGGATGA...GATGAGGAACACTGATGTGGAATAAGAGGCAGATAGAGACAAGTAGAAAGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCGAAGTAAGAGTGATCTaGGATGTAGCGGCCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSEVRVI*DVAAHS Trigger: ACTGTGGGCCGCTACATCGCAGATCACTCTTACTTC...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTGAGAAACTTGTCAGCTaGTCGTCCATAAAGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWIEKLVS*SSIKIH Trigger: GTGGATCTTTATGGACGAGCAGCTGACAAGTTTCTC...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCGTGCCCATGAGGCATaGTCTGGTCGAGGTGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKERAHEA*SGRGGL Trigger: TAGCCCACCTCGACCAGAGCATGCCTCATGGGCACG...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCTCCACCATTGCTCAATaGCACCTCCAGCTCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPSTIAQ*HLQLLE Trigger: CTCCAGGAGCTGGAGGTGGCATTGAGCAATGGTGGA...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCACTCAGGGAAAATGACTaGACAGTAGACAGCATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPFATASKHKKEPVSWISLREND*TVDSIL Trigger: AAGAATGCTGTCTACTGTGCAGTCATTTTCCCTGAG...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCAGAGCCTCTCGAACTaGCCCATGCCGCAACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKEQSLSN*PMPQQR Trigger: CCTCTGTTGCGGCATGGGCCAGTTCGAGAGGCTCTG...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCAAAGAGGAGAAGACGTaGAGCAGCTCCAGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPKEEKT*SSSRLW Trigger: CCAGAGCCTGGAGCTGCTCCACGTCTTCTCCTCTTT...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGAGGGTGCCTTCTCGATaGACAAAGGGGACAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVRVPSR*TKGTRR Trigger: TCGCCTTGTCCCCTTTGTCCATCGAGAAGGCACCCT...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCATCTCGCCCAGGTTaGAGAACCTGCACCGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKEPSRPG*RTCTAC Trigger: ACAGGCGGTGCAGGTTCTCCAACCTGGGCGAGATGG...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| 3UTR CAA 72 bp | AACATAATTCCATCTAGATCTTACTCTCCACATTGCTaGCTCAGCCTATCACCCTCCTACGCACACCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NIIPSRSYSPHC*LSLSPSYAHLF Trigger: GAACAGGTGTGCGTAGGAGGGTGATAGGCTGAGCAAGCAATGTGGAGAGTAAGATCTAGATGGAATTATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CAA 72 bp | GGTTTCAGTTGTCTTAAGAAACCTGAGGTTTCTCACTaGGACTGTTGTGGCTTCTCTTGCATCCTGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GFSCLKKPEVSH*DCCGFSCILST Trigger: AGTGGACAGGATGCAAGAGAAGCCACAACAGTCCAAGTGAGAAACCTCAGGTTTCTTAAGACAACTGAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGAGTGGGGCTCCCATCTaGCAGAGCCATGAGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKESGAPI*QSHEQK Trigger: CTTCTGCTCATGGCTCTGTCAGATGGGAGCCCCACT...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGACTCAAGGGAACTCATaGAGAGTGCAAGGGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVTQGNS*RVQGQA Trigger: TGCCTGCCCTTGCACTCTTCATGAGTTCCCTTGAGT...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCACTCAAGGGAACTCATaGAGAGTGCAAGGGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPTQGNS*RVQGQA Trigger: TGCCTGCCCTTGCACTCTTCATGAGTTCCCTTGAGT...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCGGTGAGCTACCTGAATaGCTGCATTGCAGAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSGELPE*LHCRTQ Trigger: TTGAGTTCTGCAATGCAGTCATTCAGGTAGCTCACC...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGCCGTCAGCAGGAAGTTaGCATAGACGGAGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVPSAGS*HRRSSA Trigger: TGCAGAACTCCGTCTATGTCAACTTCCTGCTGACGG...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGTCCACAGAGGTCTTGTaGAGGGCAGGGCCCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKESTEVL*RAGPMT Trigger: TGTCATGGGCCCTGCCCTGCACAAGACCTCTGTGGA...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTATGGTGTGGGTATCATaGCGATGTAACAACAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KSPFATASKHKKEPVSWIMVWVS*RCNNRN Trigger: ATTCCTGTTGTTACATCGGCATGATACCCACACCAT...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGCCACCTAGGCTCTGTTaGCGAAGAAACAGAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVPPRLC*RRNRAR Trigger: TCTGGCTCTGTTTCTTCGGCAACAGAGCCTAGGTGG...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCCCACCTAGGCTCTGTTaGCGAAGAAACAGAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPPPRLC*RRNRAR Trigger: TCTGGCTCTGTTTCTTCGGCAACAGAGCCTAGGTGG...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGGTCTACACCACGGCGTaGCTCACGCAGATACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKEVYTTA*LTQILQ Trigger: CTGGAGTATCTGCGTGAGGCACGCCGTGGTGTAGAC...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCAGCTCCTGGAGCTCTTaGCCAAAGCTCTCTAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPSSWSS*PKLSSP Trigger: AGGACTAGAGAGCTTTGGGCAAGAGCTCCAGGAGCT...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGTGCCGCAACAGAGGTTaGCGAGCTTCGCTCACTAGC | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKECRNRG*RASLTS Trigger: GCTAGTGAGCGAAGCTCGCCAACCTCTGTTGCGGCA...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGACACACACGCACAGTTaGCTGAGAAGTAGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVTHTHS*LRSSTR Trigger: CCTGGTGCTACTTCTCAGCCAACTGTGCGTGTGTGT...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCACACACACGCACAGTTaGCTGAGAAGTAGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPTHTHS*LRSSTR Trigger: CCTGGTGCTACTTCTCAGCCAACTGTGCGTGTGTGT...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGAGCAGCTCCAGGCTCTaGGGGTGGCTGCAAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKESSSRL*GWLQEE Trigger: TTCTTCTTGCAGCCACCCCCAGAGCCTGGAGCTGCT...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCGGTACTTCTTGGCTTTaGATAGCAGAGCAGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSGTSWL*IAEQGS Trigger: ACTTCCCTGCTCTGCTATCCAAAGCCAAGAAGTACC...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGGAAGAACTCGAGCAGTaGAGGCTCCCGAGCAACACA | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKEEELEQ*RLPSNT Trigger: TGTGTTGCTCGGGAGCCTTCACTGCTCGAGTTCTTC...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGCATCTGACAGAGCCATaGGCAGAAGTAGAGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVHLTEP*AEVEHH Trigger: GTGATGCTCTACTTCTGCTCATGGCTCTGTCAGATG...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGATGGGACAAGATACCTaGGAACCAGCTGCAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVMGQDT*EPAAAE Trigger: TTCTGCTGCAGCTGGTTCTCAGGTATCTTGTCCCAT...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCATGGGACAAGATACCTaGGAACCAGCTGCAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPMGQDT*EPAAAE Trigger: TTCTGCTGCAGCTGGTTCTCAGGTATCTTGTCCCAT...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | GGCTATCATGAAACCCTATCATCAGTGTTTTCACCAAAGAGAAAAATGGCCCTGCCAAACTCATCCCATTaGAACTGCCATGTCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: GYHETLSSVFSPKRKMALPNSSH*NCHVNT Trigger: AGTGTTGACATGGCAGTTGCAATGGGATGAGTTTGG...CAGGGCCATTTTTCTCTTTGGTGAAAACACTGATGATAGGGTTTCATGATAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGAAGTAAGAGTGATCTaGGATGTAGCGGCCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPEVRVI*DVAAHS Trigger: ACTGTGGGCCGCTACATCGCAGATCACTCTTACTTC...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGGGAACTCATGAAGAGTaGAAGGGCAGGCACTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVGTHEE*KGRHSY Trigger: ATAGGAGTGCCTGCCCTTGCACTCTTCATGAGTTCC...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGGAACTCATGAAGAGTaGAAGGGCAGGCACTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPGTHEE*KGRHSY Trigger: ATAGGAGTGCCTGCCCTTGCACTCTTCATGAGTTCC...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCAGCTACCTGAATGACTaGATTGCAGAACTCAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSSYLND*IAELKG Trigger: TCCCTTGAGTTCTGCAATGCAGTCATTCAGGTAGCT...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TGTCATCTGCATTTGCTTCTCAGTCAGAACTTCTTCTATACTGCAGAGGTACAGAGCTACCTGAATGACTaGATTGCAGAACTCAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CHLHLLLSQNFFYTAEVQSYLND*IAELKG Trigger: TCCCTTGAGTTCTGCAATGCAGTCATTCAGGTAGCT...CTGTACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAAGCAAATGCAGATGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGAAAGAGGAGAAGACGTaGAGCAGCTCCAGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKEKEEKT*SSSRLW Trigger: CCAGAGCCTGGAGCTGCTCCACGTCTTCTCCTCTTT...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | CCCTTGTCATCTGCATTTGCTTCTCAGTCAGAACTTCTTCTATACTGCAGAGGTTGGCTTAGCATCACATaGTTACATGGGACAAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: PLSSAFASQSELLLYCRGWLSIT*LHGTRY Trigger: GTATCTTGTCCCATGTAACCATGTGATGCTAAGCCA...ACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAAGCAAATGCAGATGACAAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCCGCACAGCTGGCTTCTaGCTTAGCATCACATGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPRTAGF*LSITWL Trigger: TAACCATGTGATGCTAAGCCAGAAGCCAGCTGTGCG...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGGGTTTCTCACAGCACTaGGATCATCTGCACCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKEGFSQH*DHLHLQ Trigger: CTGGAGGTGCAGATGATCTCAGTGCTGTGAGAAACC...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGGGTGAGCTACCTGAATaGCTGCATTGCAGAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVGELPE*LHCRTQ Trigger: TTGAGTTCTGCAATGCAGTCATTCAGGTAGCTCACC...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | TACTTAACTACTATTCACATTTTTGTTCCGTCCATTAGCCCAAGCTACATTGGTATGGGACAAGATACCTaGGAACCAGCTGCAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YLTTIHIFVPSISPSYIGMGQDT*EPAAAE Trigger: TTCTGCTGCAGCTGGTTCTCAGGTATCTTGTCCCAT...ACCAATGTAGCTTGGGCTAATGGACGGAACAAAAATGTGAATAGTAGTTAAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCGTCAGCAGGAAGTTaGCATAGACGGAGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKEPSAGS*HRRSSA Trigger: TGCAGAACTCCGTCTATGTCAACTTCCTGCTGACGG...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGAGTAGACAGCATTCTTaGCTCGAAGAGCCTCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVSRQHS*LEEPHL Trigger: AAGGTGAGGCTCTTCGAGTCAAGAATGCTGTCTACT...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCATGGTGTGGGTATCATaGCGATGTAACAACAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KLKSPFATASKHKKEPVSMVWVS*RCNNRN Trigger: ATTCCTGTTGTTACATCGGCATGATACCCACACCAT...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCACCTAGGCTCTGTTaGCGAAGAAACAGAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKEPPRLC*RRNRAR Trigger: TCTGGCTCTGTTTCTTCGGCAACAGAGCCTAGGTGG...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGGCCCAAAGCCTGAGATaGGAGGAAGAGATACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKEAQSLR*EEEIPP Trigger: AGGAGGTATCTCTTCCTCCCATCTCAGGCTTTGGGC...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGACCACCTGGGACCAATaGTTCTTGAAGACCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKETTWDQ*FLKTMR Trigger: CCTCATGGTCTTCAAGAATCATTGGTCCCAGGTGGT...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGGAAACTCAGGGAAAATaGCTGCACAGTAGACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVETQGK*LHSRQH Trigger: ATGCTGTCTACTGTGCAGTCATTTTCCCTGAGTTTC...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGCCAAACTCATCCCATTaGAACTGCCATGTCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: NKLKSPFATASKHKKEPVPNSSH*NCHVNT Trigger: AGTGTTGACATGGCAGTTGCAATGGGATGAGTTTGG...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TACCAAAATTTGGCACAAAATAAGACATTAGATTCTTCTACAGGGAACTGGGAAGAAGTAAGAGTGATCTaGGATGTAGCGGCCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: YQNLAQNKTLDSSTGNWEEVRVI*DVAAHS Trigger: ACTGTGGGCCGCTACATCGCAGATCACTCTTACTTC...TTCCCAGTTCCCTGTAGAAGAATCTAATGTCTTATTTTGTGCCAAATTTTGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGGGAACTCATGAAGAGTaGAAGGGCAGGCACTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKEGTHEE*KGRHSY Trigger: ATAGGAGTGCCTGCCCTTGCACTCTTCATGAGTTCC...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGAGAAACTTGTCAGCTaGTCGTCCATAAAGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPEKLVS*SSIKIH Trigger: GTGGATCTTTATGGACGAGCAGCTGACAAGTTTCTC...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCATGGTGTGGGTATCATaGCGATGTAACAACAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPMVWVS*RCNNRN Trigger: ATTCCTGTTGTTACATCGGCATGATACCCACACCAT...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR GCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCCTCAGGGAAAATGACTaGACAGTAGACAGCATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPLREND*TVDSIL Trigger: AAGAATGCTGTCTACTGTGCAGTCATTTTCCCTGAG...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCTGGCTTAGCATCACATaGTTACATGGGACAAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: WNKLKSPFATASKHKKEPWLSIT*LHGTRY Trigger: GTATCTTGTCCCATGTAACCATGTGATGCTAAGCCA...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR TCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGAAGAGATACCTCCTCTaGAGTATCCAACAAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKEKRYLL*SIQQER Trigger: CCTTTCTTGTTGGATACTTCAGAGGAGGTATCTCTT...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCATCACATGGTTACATaGGACAAGATACCTGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKEHHMVT*DKIPEN Trigger: GTTCTCAGGTATCTTGTCCCATGTAACCATGTGATG...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGTGGCTTAGCATCACATaGTTACATGGGACAAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: IWNKLKSPFATASKHKKEWLSIT*LHGTRY Trigger: GTATCTTGTCCCATGTAACCATGTGATGCTAAGCCA...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| 3UTR CAA 72 bp | CTCCAAAGCTCAAGTACTGCCACTGACCAAATTCCTTaGATCATCTTTCTATCAAAGACAAAGACTTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LQSSSTATDQIP*IIFLSKTKTFK Trigger: TTTAAAAGTCTTTGTCTTTGATAGAAAGATGATCAAAGGAATTTGGTCAGTGGCAGTACTTGAGCTTTGGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| 3UTR CAA 72 bp | TATCTAAAAGGATCATCTAAGATAATACATTTAGTATaGGACACACACCCTAGCACTGAAGAGTGCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YLKGSSKIIHLV*DTHPSTEECTK Trigger: TTTGGTGCACTCTTCAGTGCTAGGGTGTGTGTCCAATACTAAATGTATTATCTTAGATGATCCTTTTAGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | GCACCGCCTGTCGGGCCCTGGTTGGGCTGTGTGCATGCCGCAGGAGTAATTCCCGAGCCAGCTCCACCATaGCTCAATGCCACCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: APPVGPWLGCVHAAGVIPEPAPP*LNATSS Trigger: GCTGGAGGTGGCATTGAGCAATGGTGGAGCTGGCTC...GGGAATTACTCCTGCGGCATGCACACAGCCCAACCAGGGCCCGACAGGCGGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210448.2 |
||
| CDS TCA 90 bp | CTGCGATGTAGCGGCCCACAGTGGGGCTCCCATCTGACAGAGCCATaGGCAGAAGTAGAGCATCACGGGCCTGCTGGCCCAGGGTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LRCSGPQWGSHLTEP*AEVEHHGPAGPGCL Trigger: AAGGCACCCTGGGCCAGCAGGCCCGTGATGCTCTACTTCTGCTCATGGCTCTGTCAGATGGGAGCCCCACTGTGGGCCGCTACATCGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS GCA 90 bp | GAAGAATCAACACTTGGGCTTCCAGGGCCTCGTGCCCATGAGGCATaGTCTGGTCGAGGTGGGCTAGGGGCATGGTGCCGGCAGCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: EESTLGLPGPRAHEA*SGRGGLGAWCRQQR Trigger: ACGCTGCTGCCGGCACCATGCCCCTAGCCCACCTCGACCAGAGCATGCCTCATGGGCACGAGGCCCTGGAAGCCCAAGTGTTGATTCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | GGGCAGGTGAGCCTACAACAGAATCTTCCCTGGCTCCGAAGCACCCACAGCATCCCTGTCGGGCCCTGGTaGGGCTGTGTGCATGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GQVSLQQNLPWLRSTHSIPVGPW*GCVHAA Trigger: TGCGGCATGCACACAGCCCAACCAGGGCCCGACAGG...GATGCTGTGGGTGCTTCGGAGCCAGGGAAGATTCTGTTGTAGGCTCACCTGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | ACCTGCACCGCCTGTCGGGCCCTGGTTGGGCTGTGTGCATGCCGCAGGAGTAATACCAGACGAACCTTCTaGGCTCCTTCTGGCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: TCTACRALVGLCACRRSNTRRTF*APSGHG Trigger: GCCATGGCCAGAAGGAGCCAAGAAGGTTCGTCTGGT...ATTACTCCTGCGGCATGCACACAGCCCAACCAGGGCCCGACAGGCGGTGCAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210448.2 |
||
| CDS TCA 90 bp | CAAGCAGTGCCAATCATCCCCCGGAACCTCAATCTTTCGAGGCAGTaGGGAGTACAGGGCGCTCAGCCCTGTGGCCAGCACCGGGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QAVPIIPRNLNLSRQ*GVQGAQPCGQHRAE Trigger: TTCTGCCCGGTGCTGGCCACAGGGCTGAGCGCCCTGTACTCCTCACTGCCTCGAAAGATTGAGGTTCCGGGGGATGATTGGCACTGCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS GCA 90 bp | TCAGCCATGACAGGGGTCTGTAGACTGGCCCCTTGTGGTACACGGTaGCCAGGGACCCGGGAGGCCAGCCTGCTTAACCAGTTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SAMTGVCRLAPCGTR*PGTREASLLNQFIF Trigger: GAAGATGAACTGGTTAAGCAGGCTGGCCTCCCGGGTCCCTGGGCACCGTGTACCACAAGGGGCCAGTCTACAGACCCCTGTCATGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGCCTGTCGGGCCCTGGTaGGGCTGTGTGCATGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQPVGPW*GCVHAA Trigger: TGCGGCATGCACACAGCCCAACCAGGGCCCGACAGG...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS GCA 90 bp | CTCCCATCTGACAGAGCCATGAGCAGAAGTAGAGCATCACGGGCCTaGTGGCCCAGGGTGCCTTCTCGATGGACAAAGGGGACAAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LPSDRAMSRSRASRA*WPRVPSRWTKGTRR Trigger: TCGCCTTGTCCCCTTTGTCCATCGAGAAGGCACCCTGGGCCAGCAGGCCCGTGATGCTCTACTTCTGCTCATGGCTCTGTCAGATGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | CCTGGGAGGCCGCAAAGCTCTCAATCTTATTCTTCACAGAGCCCAGCACCTGCAAGCTGCCCGAGGGCCTaGCCGCTCCAGGATTCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PGRPQSSQSYSSQSPAPASCPRA*PLQDSY Trigger: GTACGAATCCTGGAGCGGCAAGGCCCTCGGGCAGCT...TGCAGGTGCTGGGCTCTGTGAAGAATAAGATTGAGAGCTTTGCGGCCTCCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137158.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGGGCCCTGGTACCCCATaGAGCTGGGGTGGGAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQGPGTP*SWGGSR Trigger: CCTACTCCCACCCCAGCTCAATGGGGTACCAGGGCC...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCTCGAAGAGCCTCACCTaGGCGCTCAGAAGCCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: PNIKRSPCPGFQPRPQKASKSLT*ALRSPA Trigger: GGCGGGGCTTCTGAGCGCCAAGGTGAGGCTCTTCGA...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS GCA 90 bp | GAAAAGAGGAGAAGACGTGGAGCAGCTCCAGGCTCTGGGGGTGGCTaGAAGAAGAACTCGAGCAGTGAAGGCTCCCGAGCAACACACACG | + |
|
Preference number: 5 (lower is better) Translates to: EKRRRRGAAPGSGGG*KKNSSSEGSRATHT Trigger: CGTGTGTGTTGCTCGGGAGCCTTCACTGCTCGAGTTCTTCTTGCAGCCACCCCCAGAGCCTGGAGCTGCTCCACGTCTTCTCCTCTTTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS CCA 90 bp | CCATCTGACAGAGCCATGAGCAGAAGTAGAGCATCACGGGCCTGCTaGCCCAGGGTGCCTTCTCGATGGACAAAGGGGACAAGGCGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PSDRAMSRSRASRAC*PRVPSRWTKGTRRE Trigger: TTCTCGCCTTGTCCCCTTTGTCCATCGAGAAGGCACCCTGGGCCAGCAGGCCCGTGATGCTCTACTTCTGCTCATGGCTCTGTCAGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGTCCTCCACAGAGGTCTaGTGCAGGGCAGGGCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQSSTEV*CRAGPM Trigger: CATGGGCCCTGCCCTGCACAAGACCTCTGTGGAGGA...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | GCAGTACCTTTCCTGTCGGATGCAGCCTACTATGATCTACTGGGCGTGCTAGTGTCGAAGAGCCTCACCTaGGCGCTCAGAAGCCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVPFLSDAAYYDLLGVLVSKSLT*ALRSPA Trigger: GGCGGGGCTTCTGAGCGCCAAGGTGAGGCTCTTCGA...CACTAGCACGCCCAGTAGATCATAGTAGGCTGCATCCGACAGGAAAGGTACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS TCA 90 bp | ACTCGAGCAGTGAAGGCTCCCGAGCAACACACACGCACAGTTGGCTaGGAAGTAGCACCAGGCCTTCATCCAGTGCTGGACTACTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TRAVKAPEQHTRTVG*EVAPGLHPVLDYWA Trigger: TGCCCAGTAGTCCAGCACTGGATGAAGGCCTGGTGCTACTTCTCAGCCAACTGTGCGTGTGTGTTGCTCGGGAGCCTTCACTGCTCGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGAGCTGCCCGAGGGCCTaGCCGCTCCAGGATTCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: FATASKHKKEPVSWISAQSCPRA*PLQDSY Trigger: GTACGAATCCTGGAGCGGCAAGGCCCTCGGGCAGCT...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGATGCAGAGCCGGGAGTaGCTGCCAATACGGGCAACG | + |
|
Preference number: 5 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQMQSRE*LPIRAT Trigger: CGTTGCCCGTATTGGCAGCAACTCCCGGCTCTGCAT...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGGAGCCAGCTCCACCATaGCTCAATGCCACCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQEPAPP*LNATSS Trigger: GCTGGAGGTGGCATTGAGCAATGGTGGAGCTGGCTC...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCGAGCCAGCTCCACCATaGCTCAATGCCACCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PNIKRSPCPGFQPRPQKAEPAPP*LNATSS Trigger: GCTGGAGGTGGCATTGAGCAATGGTGGAGCTGGCTC...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | TTGGGCTGTGTGCATGCCGCAGGAGTAATTCCCCCAAGGATGGCCTCCGGCTCCAGCATGTTCTCGAGTTaGGCAAAGAGCACAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LGCVHAAGVIPPRMASGSSMFSS*AKSTAM Trigger: CATGGCTGTGCTCTTTGCCAAACTCGAGAACATGCT...GGAGCCGGAGGCCATCCTTGGGGGAATTACTCCTGCGGCATGCACACAGCCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000210448.2 ENSMUST00000211549.2 |
||
| CDS-3UTR CAA 90 bp | CCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAAGGCCTCAGCCCAGTCCAGCTaGCCACGGGCAATGAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PNIKRSPCPGFQPRPQKASAQSS*PRAMRY Trigger: GTACCTCATTGCCCGTGGCAAGCTGGACTGGGCTGA...GGCCTTCTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | TTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGTCGAAGAGCCTCACCTaGGCGCTCAGAAGCCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: FATASKHKKEPVSWISAQSKSLT*ALRSPA Trigger: GGCGGGGCTTCTGAGCGCCAAGGTGAGGCTCTTCGA...CTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS GCA 90 bp | CCACAGGCATCCAGTAGGGCAAGCAGAGCCTCTCGAACTGGCCCATaGCGCAACAGAGGTTGGCGAGCTTCGCTCACTAGCATTTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PQASSRASRASRTGP*RNRGWRASLTSISN Trigger: ATTTGAAATGCTAGTGAGCGAAGCTCGCCAACCTCTGTTGCGGCATGGGCCAGTTCGAGAGGCTCTGCTTGCCCTACTGGATGCCTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCACCTGTCGGGCCCTGGTaGGGCTGTGTGCATGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPFATASKHKKEPVSWISPVGPW*GCVHAA Trigger: TGCGGCATGCACACAGCCCAACCAGGGCCCGACAGG...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS CCA 90 bp | AAGAACTCGAGCAGTGAAGGCTCCCGAGCAACACACACGCACAGTTaGCTGAGAAGTAGCACCAGGCCTTCATCCAGTGCTGGACTACTG | + |
|
Preference number: 5 (lower is better) Translates to: KNSSSEGSRATHTHS*LRSSTRPSSSAGLL Trigger: CAGTAGTCCAGCACTGGATGAAGGCCTGGTGCTACTTCTCAGCCAACTGTGCGTGTGTGTTGCTCGGGAGCCTTCACTGCTCGAGTTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS CCA 90 bp | ATGAGGTACTTCTTGGCTTTGGATAGCAGAGCAGGGAAGTCCTCCTaGGAGGCCGCAAAGCTCTCAATTGCACCAGTGAAGGGCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: MRYFLALDSRAGKSS*EAAKLSIAPVKGWL Trigger: GAGCCAGCCCTTCACTGGTGCAATTGAGAGCTTTGCGGCCTCCCAGGAGGACTTCCCTGCTCTGCTATCCAAAGCCAAGAAGTACCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074686.10 |
||
| CDS-3UTR CAA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAAGCTGCCCGAGGGCCTaGCCGCTCCAGGATTCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SPFATASKHKKEPVSWISSCPRA*PLQDSY Trigger: GTACGAATCCTGGAGCGGCAAGGCCCTCGGGCAGCT...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCATCGAAGAGCCTCACCTaGGCGCTCAGAAGCCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPFATASKHKKEPVSWISSKSLT*ALRSPA Trigger: GGCGGGGCTTCTGAGCGCCAAGGTGAGGCTCTTCGA...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTGGCCCTGGTACCCCATaGAGCTGGGGTGGGAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: KSPFATASKHKKEPVSWIGPGTP*SWGGSR Trigger: CCTACTCCCACCCCAGCTCAATGGGGTACCAGGGCC...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | TGCTGTAGGACCCTCAGCCCAGTCCAGCTTGCCACGGGCAATGAGGTACTTCTTAGCATGTTCTCGAGTTaGGCAAAGAGCACAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: CCRTLSPVQLATGNEVLLSMFSS*AKSTAM Trigger: CATGGCTGTGCTCTTTGCCAAACTCGAGAACATGCT...AAGAAGTACCTCATTGCCCGTGGCAAGCTGGACTGGGCTGAGGGTCCTACAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210448.2 ENSMUST00000211549.2 |
||
| CDS-3UTR CAA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGTCAGCCCAGTCCAGCTaGCCACGGGCAATGAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQSAQSS*PRAMRY Trigger: GTACCTCATTGCCCGTGGCAAGCTGGACTGGGCTGA...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCGAAGTAGAACTGGAGTaGAAGCCCCTGGAGAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PFATASKHKKEPVSWISAEVELE*KPLESP Trigger: GGGGCTCTCCAGGGGCTTCAACTCCAGTTCTACTTC...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS GCA 90 bp | TGTTCAGCCCGCCGTTCTTCAACCCCATCCCCAAACTCATCCCATTaGAACTGCCATGTCAACACTCGGCTCAGCAGATCTTCACGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CSARRSSTPSPNSSH*NCHVNTRLSRSSRR Trigger: TCTTCGTGAAGATCTGCTGAGCCGAGTGTTGACATGGCAGTTGCAATGGGATGAGTTTGGGGATGGGGTTGAAGAACGGCGGGCTGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAATGCAGAGCCGGGAGTaGCTGCCAATACGGGCAACG | + |
|
Preference number: 5 (lower is better) Translates to: SPFATASKHKKEPVSWISMQSRE*LPIRAT Trigger: CGTTGCCCGTATTGGCAGCAACTCCCGGCTCTGCAT...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | CCCTTGTCATCTGCATTTGCTTCTCAGTCAGAACTTCTTCTATACTGCAGAGGTGGCCCTGGTACCCCATaGAGCTGGGGTGGGAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLSSAFASQSELLLYCRGGPGTP*SWGGSR Trigger: CCTACTCCCACCCCAGCTCAATGGGGTACCAGGGCC...ACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAAGCAAATGCAGATGACAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGACCAGACGAACCTTCTaGGCTCCTTCTGGCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQTRRTF*APSGHG Trigger: GCCATGGCCAGAAGGAGCCAAGAAGGTTCGTCTGGT...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGAGGTACTTCTTGGCTTaGGATAGCAGAGCAGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQRYFLA*DSRAGK Trigger: CTTCCCTGCTCTGCTATCCAAAGCCAAGAAGTACCT...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCACGAAGAATCAACACTaGGGCTTCCAGGGCCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: PFATASKHKKEPVSWISATKNQH*GFQGLV Trigger: CACGAGGCCCTGGAAGCCCAAGTGTTGATTCTTCGT...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS CCA 90 bp | AGGGCAAGCAGAGCCTCTCGAACTGGCCCATGCCGCAACAGAGGTTaGCGAGCTTCGCTCACTAGCATTTCAAATAGTTTCAACTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RASRASRTGPCRNRG*RASLTSISNSFNCS Trigger: TGAACAGTTGAAACTATTTGAAATGCTAGTGAGCGAAGCTCGCCAACCTCTGTTGCGGCATGGGCCAGTTCGAGAGGCTCTGCTTGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | CTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCAGGCCACAGGCAATGAGGTACTTCTaGGCTTTGGATAGCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPPNIKRSPCPGFQPRPQAMRYF*ALDSRA Trigger: TGCTCTGCTATCCAAAGCCAAGAAGTACCTCATTGC...CTGTGGCCTGGGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCCCCAAACTCATCCCATaGCAACTGCCATGTCAACAC | + |
|
Preference number: 5 (lower is better) Translates to: PFATASKHKKEPVSWISAPKLIP*QLPCQH Trigger: GTGTTGACATGGCAGTTGCAATGGGATGAGTTTGGG...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCTCTCCTTCCCTTACATaGTCCCTGTCTTCCTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PFATASKHKKEPVSWISASPSLT*SLSSSG Trigger: ACCAGAGGAAGACAGGGACAATGTAAGGGAAGGAGA...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTACCAGACGAACCTTCTaGGCTCCTTCTGGCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: KSPFATASKHKKEPVSWITRRTF*APSGHG Trigger: GCCATGGCCAGAAGGAGCCAAGAAGGTTCGTCTGGT...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | CCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCCAGGTACTTCTTGGCTTaGGATAGCAGAGCAGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PFATASKHKKEPVSWISARYFLA*DSRAGK Trigger: CTTCCCTGCTCTGCTATCCAAAGCCAAGAAGTACCT...GGCTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | CCCTTGTCATCTGCATTTGCTTCTCAGTCAGAACTTCTTCTATACTGCAGAGGTTCAGCCCAGTCCAGCTaGCCACGGGCAATGAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PLSSAFASQSELLLYCRGSAQSS*PRAMRY Trigger: GTACCTCATTGCCCGTGGCAAGCTGGACTGGGCTGA...ACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAAGCAAATGCAGATGACAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGAGCTGCCCGAGGGCCTaGCCGCTCCAGGATTCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: NKLKSPFATASKHKKEPVSCPRA*PLQDSY Trigger: GTACGAATCCTGGAGCGGCAAGGCCCTCGGGCAGCT...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | AAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCATGCAGAGCCGGGAGTaGCTGCCAATACGGGCAACG | + |
|
Preference number: 5 (lower is better) Translates to: KLKSPFATASKHKKEPVSMQSRE*LPIRAT Trigger: CGTTGCCCGTATTGGCAGCAACTCCCGGCTCTGCAT...GGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | AAGGATAAGGTAGGTAAAGTGAGAGGGCTAAGGGAAAAGTGGCAAAGTATGACCACCAGACGAACCTTCTaGGCTCCTTCTGGCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: KDKVGKVRGLREKWQSMTTRRTF*APSGHG Trigger: GCCATGGCCAGAAGGAGCCAAGAAGGTTCGTCTGGT...GGTCATACTTTGCCACTTTTCCCTTAGCCCTCTCACTTTACCTACCTTATCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGAGGTACTTCTTGGCTTaGGATAGCAGAGCAGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQRYFLA*DSRAGK Trigger: CTTCCCTGCTCTGCTATCCAAAGCCAAGAAGTACCT...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | GAGACCAACTGCACTGCCTTTTGGACAGTTTTCCTGATAACACTTTCCTATCAGGAAGTAGAACTGGAGTaGAAGCCCCTGGAGAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ETNCTAFWTVFLITLSYQEVELE*KPLESP Trigger: GGGGCTCTCCAGGGGCTTCAACTCCAGTTCTACTTC...CTGATAGGAAAGTGTTATCAGGAAAACTGTCCAAAAGGCAGTGCAGTTGGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCGAAGAGCCTCACCTaGGCGCTCAGAAGCCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: NKLKSPFATASKHKKEPVSKSLT*ALRSPA Trigger: GGCGGGGCTTCTGAGCGCCAAGGTGAGGCTCTTCGA...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTCCACAGAGGTCTaGTGCAGGGCAGGGCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: NKLKSPFATASKHKKEPVSSTEV*CRAGPM Trigger: CATGGGCCCTGCCCTGCACAAGACCTCTGTGGAGGA...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCTCCTCCACAGAGGTCTaGTGCAGGGCAGGGCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: WNKLKSPFATASKHKKEPSSTEV*CRAGPM Trigger: CATGGGCCCTGCCCTGCACAAGACCTCTGTGGAGGA...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAAGGTACTTCTTGGCTTaGGATAGCAGAGCAGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPFATASKHKKEPVSWISRYFLA*DSRAGK Trigger: CTTCCCTGCTCTGCTATCCAAAGCCAAGAAGTACCT...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | GTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGGCAATGAGGTACTTCTaGGCTTTGGATAGCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VHLPLPPNIKRSPCPGFQAMRYF*ALDSRA Trigger: TGCTCTGCTATCCAAAGCCAAGAAGTACCTCATTGC...CTGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCTGTCGGGCCCTGGTaGGGCTGTGTGCATGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: IWNKLKSPFATASKHKKEPVGPW*GCVHAA Trigger: TGCGGCATGCACACAGCCCAACCAGGGCCCGACAGG...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | TACTTAACTACTATTCACATTTTTGTTCCGTCCATTAGCCCAAGCTACATTGGTTCCTCCACAGAGGTCTaGTGCAGGGCAGGGCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: YLTTIHIFVPSISPSYIGSSTEV*CRAGPM Trigger: CATGGGCCCTGCCCTGCACAAGACCTCTGTGGAGGA...ACCAATGTAGCTTGGGCTAATGGACGGAACAAAAATGTGAATAGTAGTTAAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCTCCTTCCCTTACATaGTCCCTGTCTTCCTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KSPFATASKHKKEPVSWISPSLT*SLSSSG Trigger: ACCAGAGGAAGACAGGGACAATGTAAGGGAAGGAGA...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | AAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTAGCATGTTCTCGAGTTaGGCAAAGAGCACAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: KSPFATASKHKKEPVSWISMFSS*AKSTAM Trigger: CATGGCTGTGCTCTTTGCCAAACTCGAGAACATGCT...AATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 ENSMUST00000211549.2 |
||
| CDS-3UTR CAA 90 bp | AGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCCTGGATTTCAGCAATGAGGTACTTCTaGGCTTTGGATAGCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPFATASKHKKEPVSWISAMRYF*ALDSRA Trigger: TGCTCTGCTATCCAAAGCCAAGAAGTACCTCATTGC...TGAAATCCAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCTCAGCCCAGTCCAGCTaGCCACGGGCAATGAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: WNKLKSPFATASKHKKEPSAQSS*PRAMRY Trigger: GTACCTCATTGCCCGTGGCAAGCTGGACTGGGCTGA...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCAGCCCAGTCCAGCTaGCCACGGGCAATGAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: NKLKSPFATASKHKKEPVSAQSS*PRAMRY Trigger: GTACCTCATTGCCCGTGGCAAGCTGGACTGGGCTGA...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | TGTCCTTTCTACTTGTCTCTATCTGCCTCTTATTCCACATCAGTGTTCCTCATCACGAAGAATCAACACTaGGGCTTCCAGGGCCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: CPFYLSLSASYSTSVFLITKNQH*GFQGLV Trigger: CACGAGGCCCTGGAAGCCCAAGTGTTGATTCTTCGT...GATGAGGAACACTGATGTGGAATAAGAGGCAGATAGAGACAAGTAGAAAGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | CCCTTGTCATCTGCATTTGCTTCTCAGTCAGAACTTCTTCTATACTGCAGAGGTTCTCCTTCCCTTACATaGTCCCTGTCTTCCTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PLSSAFASQSELLLYCRGSPSLT*SLSSSG Trigger: ACCAGAGGAAGACAGGGACAATGTAAGGGAAGGAGA...ACCTCTGCAGTATAGAAGAAGTTCTGACTGAGAAGCAAATGCAGATGACAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCACCAGACGAACCTTCTaGGCTCCTTCTGGCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: WNKLKSPFATASKHKKEPTRRTF*APSGHG Trigger: GCCATGGCCAGAAGGAGCCAAGAAGGTTCGTCTGGT...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | TACTTAACTACTATTCACATTTTTGTTCCGTCCATTAGCCCAAGCTACATTGGTGAGCCAGCTCCACCATaGCTCAATGCCACCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: YLTTIHIFVPSISPSYIGEPAPP*LNATSS Trigger: GCTGGAGGTGGCATTGAGCAATGGTGGAGCTGGCTC...ACCAATGTAGCTTGGGCTAATGGACGGAACAAAAATGTGAATAGTAGTTAAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGGAAGTAGAACTGGAGTaGAAGCCCCTGGAGAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: NKLKSPFATASKHKKEPVEVELE*KPLESP Trigger: GGGGCTCTCCAGGGGCTTCAACTCCAGTTCTACTTC...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | TACCAAAATTTGGCACAAAATAAGACATTAGATTCTTCTACAGGGAACTGGGAAATGCAGAGCCGGGAGTaGCTGCCAATACGGGCAACG | + |
|
Preference number: 5 (lower is better) Translates to: YQNLAQNKTLDSSTGNWEMQSRE*LPIRAT Trigger: CGTTGCCCGTATTGGCAGCAACTCCCGGCTCTGCAT...TTCCCAGTTCCCTGTAGAAGAATCTAATGTCTTATTTTGTGCCAAATTTTGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | GGCTATCATGAAACCCTATCATCAGTGTTTTCACCAAAGAGAAAAATGGCCCTGAGCATGTTCTCGAGTTaGGCAAAGAGCACAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: GYHETLSSVFSPKRKMALSMFSS*AKSTAM Trigger: CATGGCTGTGCTCTTTGCCAAACTCGAGAACATGCT...CAGGGCCATTTTTCTCTTTGGTGAAAACACTGATGATAGGGTTTCATGATAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | TGTCCTTTCTACTTGTCTCTATCTGCCTCTTATTCCACATCAGTGTTCCTCATCGCAATGAGGTACTTCTaGGCTTTGGATAGCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CPFYLSLSASYSTSVFLIAMRYF*ALDSRA Trigger: TGCTCTGCTATCCAAAGCCAAGAAGTACCTCATTGC...GATGAGGAACACTGATGTGGAATAAGAGGCAGATAGAGACAAGTAGAAAGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGGAAGTAGAACTGGAGTaGAAGCCCCTGGAGAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: IWNKLKSPFATASKHKKEEVELE*KPLESP Trigger: GGGGCTCTCCAGGGGCTTCAACTCCAGTTCTACTTC...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | AATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGTGTCTCCTTCCCTTACATaGTCCCTGTCTTCCTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: NKLKSPFATASKHKKEPVSPSLT*SLSSSG Trigger: ACCAGAGGAAGACAGGGACAATGTAAGGGAAGGAGA...CACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCAGCATGTTCTCGAGTTaGGCAAAGAGCACAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: WNKLKSPFATASKHKKEPSMFSS*AKSTAM Trigger: CATGGCTGTGCTCTTTGCCAAACTCGAGAACATGCT...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 ENSMUST00000211549.2 |
||
| CDS-3UTR CAA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGACGAAGAATCAACACTaGGGCTTCCAGGGCCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: IWNKLKSPFATASKHKKETKNQH*GFQGLV Trigger: CACGAGGCCCTGGAAGCCCAAGTGTTGATTCTTCGT...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | TGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGCCCGCAATGAGGTACTTCTaGGCTTTGGATAGCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: WNKLKSPFATASKHKKEPAMRYF*ALDSRA Trigger: TGCTCTGCTATCCAAAGCCAAGAAGTACCTCATTGC...GGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS-3UTR CAA 90 bp | ATCTGGAATAAATTAAAAAGTCCATTTGCCACTGCCTCCAAACATAAAAAGGAGAGCATGTTCTCGAGTTaGGCAAAGAGCACAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: IWNKLKSPFATASKHKKESMFSS*AKSTAM Trigger: CATGGCTGTGCTCTTTGCCAAACTCGAGAACATGCT...CTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTTTAATTTATTCCAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000048079.14 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000179474.9 ENSMUST00000211549.2 |
||
| CDS GCA 72 bp | ACACTTGGGCTTCCAGGGCCTCGTGCCCATGAGGCATaGTCTGGTCGAGGTGGGCTAGGGGCATGGTGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TLGLPGPRAHEA*SGRGGLGAWCR Trigger: CCGGCACCATGCCCCTAGCCCACCTCGACCAGAGCATGCCTCATGGGCACGAGGCCCTGGAAGCCCAAGTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS GCA 72 bp | ACAGGGGTCTGTAGACTGGCCCCTTGTGGTACACGGTaGCCAGGGACCCGGGAGGCCAGCCTGCTTAACCAG | + |
|
Preference number: 6 (lower is better) Translates to: TGVCRLAPCGTR*PGTREASLLNQ Trigger: CTGGTTAAGCAGGCTGGCCTCCCGGGTCCCTGGGCACCGTGTACCACAAGGGGCCAGTCTACAGACCCCTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS TCA 72 bp | CCTCCTGGGAGGCCGCAAAGCTCTCAATTGCACCAGTaGAGGGCTGGCTCGGCAGCTGGTGGAGAGTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PPGRPQSSQLHQ*RAGSAAGGESA Trigger: TGCGGACTCTCCACCAGCTGCCGAGCCAGCCCTTCACTGGTGCAATTGAGAGCTTTGCGGCCTCCCAGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074686.10 |
||
| CDS CCA 72 bp | TCAATTGCACCAGTGAAGGGCTGGCTCGGCAGCTGGTaGAGAGTCCGCAAAGGGCTGCTGAGGAAGGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SIAPVKGWLGSW*RVRKGLLRKGP Trigger: CGGCCCCTTCCTCAGCAGCCCTTTGCGGACTCTCCACCAGCTGCCGAGCCAGCCCTTCACTGGTGCAATTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074686.10 |
||
| CDS CCA 72 bp | CTCTCAATTGCACCAGTGAAGGGCTGGCTCGGCAGCTaGTGGAGAGTCCGCAAAGGGCTGCTGAGGAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSIAPVKGWLGS*WRVRKGLLRKG Trigger: CCCCTTCCTCAGCAGCCCTTTGCGGACTCTCCACCAGCTGCCGAGCCAGCCCTTCACTGGTGCAATTGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074686.10 |
||
| CDS CCA 72 bp | GAGGCCGCAAAGCTCTCAATTGCACCAGTGAAGGGCTaGCTCGGCAGCTGGTGGAGAGTCCGCAAAGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: EAAKLSIAPVKG*LGSWWRVRKGL Trigger: CAGCCCTTTGCGGACTCTCCACCAGCTGCCGAGCCAGCCCTTCACTGGTGCAATTGAGAGCTTTGCGGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074686.10 |
||
| CDS GCA 72 bp | TCCAGTAGGGCAAGCAGAGCCTCTCGAACTGGCCCATaGCGCAACAGAGGTTGGCGAGCTTCGCTCACTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSRASRASRTGP*RNRGWRASLTS Trigger: GCTAGTGAGCGAAGCTCGCCAACCTCTGTTGCGGCATGGGCCAGTTCGAGAGGCTCTGCTTGCCCTACTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS GCA 72 bp | GACAGAGCCATGAGCAGAAGTAGAGCATCACGGGCCTaGTGGCCCAGGGTGCCTTCTCGATGGACAAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: DRAMSRSRASRA*WPRVPSRWTKG Trigger: CCCCTTTGTCCATCGAGAAGGCACCCTGGGCCAGCAGGCCCGTGATGCTCTACTTCTGCTCATGGCTCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS CAA 72 bp | GAGATCATCTGCACCTCCAGTAGCTGCCCGAGGGCCTaGCCGCTCCAGGATTCGTACCACCTGGGACCAATG | + |
|
Preference number: 6 (lower is better) Translates to: EIICTSSSCPRA*PLQDSYHLGPM Trigger: CATTGGTCCCAGGTGGTACGAATCCTGGAGCGGCAAGGCCCTCGGGCAGCTACTGGAGGTGCAGATGATCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS GCA 72 bp | GCAGAAGTAGAGCATCACGGGCCTGCTGGCCCAGGGTaGCTTCTCGATGGACAAAGGGGACAAGGCGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: AEVEHHGPAGPG*LLDGQRGQGEK Trigger: TTTCTCGCCTTGTCCCCTTTGTCCATCGAGAAGGCACCCTGGGCCAGCAGGCCCGTGATGCTCTACTTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS CCA 72 bp | AGAGCCATGAGCAGAAGTAGAGCATCACGGGCCTGCTaGCCCAGGGTGCCTTCTCGATGGACAAAGGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: RAMSRSRASRAC*PRVPSRWTKGT Trigger: TGTCCCCTTTGTCCATCGAGAAGGCACCCTGGGCCAGCAGGCCCGTGATGCTCTACTTCTGCTCATGGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS CAA 72 bp | GGCGGGGCACTGTTACCACTGACGAAGAATCAACACTaGGGCTTCCAGGGCCTCGTGCCCATGAGGCATGCT | + |
|
Preference number: 6 (lower is better) Translates to: GGALLPLTKNQH*GFQGLVPMRHA Trigger: AGCATGCCTCATGGGCACGAGGCCCTGGAAGCCCAAGTGTTGATTCTTCGTCAGTGGTAACAGTGCCCCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074686.10 ENSMUST00000122327.7 ENSMUST00000179474.9 |
||
| CDS CAA 90 bp | CACAGCACTGAGATCATCTGCACCTCCAGTAGCTGCCCGAGGGCCTaGCCGCTCCAGGATTCGTACCACCTGGGACCAATGATTCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: HSTEIICTSSSCPRA*PLQDSYHLGPMILE Trigger: TTCAAGAATCATTGGTCCCAGGTGGTACGAATCCTGGAGCGGCAAGGCCCTCGGGCAGCTACTGGAGGTGCAGATGATCTCAGTGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS CCA 72 bp | AGCAGTGAAGGCTCCCGAGCAACACACACGCACAGTTaGCTGAGAAGTAGCACCAGGCCTTCATCCAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSEGSRATHTHS*LRSSTRPSSSA Trigger: AGCACTGGATGAAGGCCTGGTGCTACTTCTCAGCCAACTGTGCGTGTGTGTTGCTCGGGAGCCTTCACTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS CAA 72 bp | CCGCCGTTCTTCAACCCCATCCCCAAACTCATCCCATaGCAACTGCCATGTCAACACTCGGCTCAGCAGATC | + |
|
Preference number: 6 (lower is better) Translates to: PPFFNPIPKLIP*QLPCQHSAQQI Trigger: GATCTGCTGAGCCGAGTGTTGACATGGCAGTTGCAATGGGATGAGTTTGGGGATGGGGTTGAAGAACGGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS CAA 90 bp | CTGTTCAGCCCGCCGTTCTTCAACCCCATCCCCAAACTCATCCCATaGCAACTGCCATGTCAACACTCGGCTCAGCAGATCTTCACGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LFSPPFFNPIPKLIP*QLPCQHSAQQIFTK Trigger: CTTCGTGAAGATCTGCTGAGCCGAGTGTTGACATGGCAGTTGCAATGGGATGAGTTTGGGGATGGGGTTGAAGAACGGCGGGCTGAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS GCA 72 bp | CGCCGTTCTTCAACCCCATCCCCAAACTCATCCCATTaGAACTGCCATGTCAACACTCGGCTCAGCAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: RRSSTPSPNSSH*NCHVNTRLSRS Trigger: AGATCTGCTGAGCCGAGTGTTGACATGGCAGTTGCAATGGGATGAGTTTGGGGATGGGGTTGAAGAACGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||
| CDS CCA 72 bp | AGAGCCTCTCGAACTGGCCCATGCCGCAACAGAGGTTaGCGAGCTTCGCTCACTAGCATTTCAAATAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RASRTGPCRNRG*RASLTSISNSF Trigger: GAAACTATTTGAAATGCTAGTGAGCGAAGCTCGCCAACCTCTGTTGCGGCATGGGCCAGTTCGAGAGGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048079.14 ENSMUST00000074686.10 ENSMUST00000118726.8 ENSMUST00000122327.7 ENSMUST00000137158.8 ENSMUST00000179474.9 |
||