Pregenerated sensors for FAM155A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079157Ensembl transcript IDs: ENSMUST00000110969.5, ENSMUST00000207869.2, ENSMUST00000208933.2
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCTGCGCTCTGCGCACGCGCCTGGCTGCGCTCAGTCCTCCCGGGTaGAGTTGTCCTCGAGCGTGGGGAGGCCACCCAGGCCCAGTCCCG | + |
|
Preference number: 1 (lower is better) Translates to: PCALRTRLAALSPPG*SCPRAWGGHPGPVP Trigger: CGGGACTGGGCCTGGGTGGCCTCCCCACGCTCGAGGACAACTCCACCCGGGAGGACTGAGCGCAGCCAGGCGCGTGCGCAGAGCGCAGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR CCA 90 bp | CGCCTGGCTGCGCTCAGTCCTCCCGGGTGGAGTTGTCCTCGAGCGTaGGGAGGCCACCCAGGCCCAGTCCCGTGGAGTTCTGCGCTGCGG | + |
|
Preference number: 1 (lower is better) Translates to: RLAALSPPGWSCPRA*GGHPGPVPWSSALR Trigger: CCGCAGCGCAGAACTCCACGGGACTGGGCCTGGGTGGCCTCCCCACGCTCGAGGACAACTCCACCCGGGAGGACTGAGCGCAGCCAGGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR GCA 90 bp | CTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGCGCTCTaGGCACGCGCCTGGCTGCGCTCAGTCCTCCCGGGTGGAGTTGTC | + |
|
Preference number: 1 (lower is better) Translates to: LLLCAKRVSLPSPAL*ARAWLRSVLPGGVV Trigger: GACAACTCCACCCGGGAGGACTGAGCGCAGCCAGGCGCGTGCGCAGAGCGCAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR GCA 90 bp | TCCTCGAGCGTGGGGAGGCCACCCAGGCCCAGTCCCGTGGAGTTCTaGGCTGCGGAGGCCGTGAGCACTGTGTGGAGGAGAATGAGGACG | + |
|
Preference number: 1 (lower is better) Translates to: SSSVGRPPRPSPVEF*AAEAVSTVWRRMRT Trigger: CGTCCTCATTCTCCTCCACACAGTGCTCACGGCCTCCGCAGCGCAGAACTCCACGGGACTGGGCCTGGGTGGCCTCCCCACGCTCGAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR GCA 90 bp | GAGCGTGGGGAGGCCACCCAGGCCCAGTCCCGTGGAGTTCTGCGCTaGGGAGGCCGTGAGCACTGTGTGGAGGAGAATGAGGACGAGTAC | + |
|
Preference number: 1 (lower is better) Translates to: ERGEATQAQSRGVLR*GGREHCVEENEDEY Trigger: GTACTCGTCCTCATTCTCCTCCACACAGTGCTCACGGCCTCCGCAGCGCAGAACTCCACGGGACTGGGCCTGGGTGGCCTCCCCACGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR CCA 90 bp | GCCCGCACCTTGCGGGCAGTGGGCCATGGGCTGCTCCTGTCTGCCTaGCCAGGAAGAAAGAACCGGGGATGGGTACTGGAGCGACCTGTC | + |
|
Preference number: 1 (lower is better) Translates to: ARTLRAVGHGLLLSA*PGRKNRGWVLERPV Trigger: GACAGGTCGCTCCAGTACCCATCCCCGGTTCTTTCTTCCTGGCCAGGCAGACAGGAGCAGCCCATGGCCCACTGCCCGCAAGGTGCGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR GCA 90 bp | AAGAGGGGCTGCTTGCCCGCACCTTGCGGGCAGTGGGCCATGGGCTaGTCCTGTCTGCCTGGCCAGGAAGAAAGAACCGGGGATGGGTAC | + |
|
Preference number: 1 (lower is better) Translates to: KRGCLPAPCGQWAMG*SCLPGQEERTGDGY Trigger: GTACCCATCCCCGGTTCTTTCTTCCTGGCCAGGCAGACAGGAGCAGCCCATGGCCCACTGCCCGCAAGGTGCGGGCAAGCAGCCCCTCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR GCA 90 bp | CTCCCATCACTCGGCGGAGTCAAGCATCTGGTGTTGAAGAGGGGCTaGTTGCCCGCACCTTGCGGGCAGTGGGCCATGGGCTGCTCCTGT | + |
|
Preference number: 1 (lower is better) Translates to: LPSLGGVKHLVLKRG*LPAPCGQWAMGCSC Trigger: ACAGGAGCAGCCCATGGCCCACTGCCCGCAAGGTGCGGGCAAGCAGCCCCTCTTCAACACCAGATGCTTGACTCCGCCGAGTGATGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR GCA 90 bp | CCCTGGCTCCCTCTGCTCGGGCTTGTGCAGGACACATACCCACCATaGGAGACACAGACAGAAGCAAGCGGATGTTGTCTGCTTAGGGAC | + |
|
Preference number: 1 (lower is better) Translates to: PWLPLLGLVQDTYPP*ETQTEASGCCLLRD Trigger: GTCCCTAAGCAGACAACATCCGCTTGCTTCTGTCTGTGTCTCGCATGGTGGGTATGTGTCCTGCACAAGCCCGAGCAGAGGGAGCCAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR CCA 90 bp | CATGGGCTGCTCCTGTCTGCCTGGCCAGGAAGAAAGAACCGGGGATaGGTACTGGAGCGACCTGTCCGCGGGAGCGTTTCACTCTTTTAT | + |
|
Preference number: 1 (lower is better) Translates to: HGLLLSAWPGRKNRG*VLERPVRGSVSLFY Trigger: ATAAAAGAGTGAAACGCTCCCGCGGACAGGTCGCTCCAGTACCCATCCCCGGTTCTTTCTTCCTGGCCAGGCAGACAGGAGCAGCCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR GCA 90 bp | CCTGGGACAGGAGTCTCTTCTGTCCACGGTTCCTTTGGGTCTGGGTaGGGTTTGCTCCTCGCTCCTGATGTCACAGCATTCGGGTTCATC | + |
|
Preference number: 1 (lower is better) Translates to: PGTGVSSVHGSFGSG*GLLLAPDVTAFGFI Trigger: GATGAACCCGAATGCTGTGACATCAGGAGCGAGGAGCAAACCGCACCCAGACCCAAAGGAACCGTGGACAGAAGAGACTCCTGTCCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR CCA 90 bp | TGCTCCTGTCTGCCTGGCCAGGAAGAAAGAACCGGGGATGGGTACTaGAGCGACCTGTCCGCGGGAGCGTTTCACTCTTTTATTATGTGT | + |
|
Preference number: 1 (lower is better) Translates to: CSCLPGQEERTGDGY*SDLSAGAFHSFIMC Trigger: ACACATAATAAAAGAGTGAAACGCTCCCGCGGACAGGTCGCTCCAGTACCCATCCCCGGTTCTTTCTTCCTGGCCAGGCAGACAGGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR GCA 90 bp | CAGGAGTCTCTTCTGTCCACGGTTCCTTTGGGTCTGGGTGCGGTTTaGTCCTCGCTCCTGATGTCACAGCATTCGGGTTCATCATTGGTT | + |
|
Preference number: 1 (lower is better) Translates to: QESLLSTVPLGLGAV*SSLLMSQHSGSSLV Trigger: AACCAATGATGAACCCGAATGCTGTGACATCAGGAGCGAGGAGCAAACCGCACCCAGACCCAAAGGAACCGTGGACAGAAGAGACTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR TCA 90 bp | TGTCCACGGTTCCTTTGGGTCTGGGTGCGGTTTGCTCCTCGCTCCTaGTGTCACAGCATTCGGGTTCATCATTGGTTAGGAAGGTTTCGT | + |
|
Preference number: 1 (lower is better) Translates to: CPRFLWVWVRFAPRS*CHSIRVHHWLGRFR Trigger: ACGAAACCTTCCTAACCAATGATGAACCCGAATGCTGTGACATCAGGAGCGAGGAGCAAACCGCACCCAGACCCAAAGGAACCGTGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR GCA 90 bp | AGATGTAGCAAGGAAGCAGATAGCACATCGAGTGTGATAAGCAGATaGCACACCAGCTGTCAGCTCAGGAGTGGGGTCCTGTGGTTGGCT | + |
|
Preference number: 1 (lower is better) Translates to: RCSKEADSTSSVISR*HTSCQLRSGVLWLA Trigger: AGCCAACCACAGGACCCCACTCCTGAGCTGACAGCTGGTGTGGCATCTGCTTATCACACTCGATGTGCTATCTGCTTCCTTGCTACATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| 3UTR CCA 90 bp | CTAGAATCCCTCCACCATCACCATGATAGGGGAGGAACAGAAGTCTaGATTTGCGTTCTTGGTCTCTGCTCCCATCACTCGGCGGAGTCA | + |
|
Preference number: 1 (lower is better) Translates to: LESLHHHHDRGGTEV*ICVLGLCSHHSAES Trigger: TGACTCCGCCGAGTGATGGGAGCAGAGACCAAGAACGCAAATCCAGACTTCTGTTCCTCCCCTATCATGGTGATGGTGGAGGGATTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR CCA 90 bp | ATAAGCAGATGCCACACCAGCTGTCAGCTCAGGAGTGGGGTCCTGTaGTTGGCTCTGAACTTCTTTCCAGACTCAGAGCACTTCGCCAAT | + |
|
Preference number: 1 (lower is better) Translates to: ISRCHTSCQLRSGVL*LALNFFPDSEHFAN Trigger: ATTGGCGAAGTGCTCTGAGTCTGGAAAGAAGTTCAGAGCCAACCACAGGACCCCACTCCTGAGCTGACAGCTGGTGTGGCATCTGCTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| 3UTR CCA 90 bp | ATCGAGTGTGATAAGCAGATGCCACACCAGCTGTCAGCTCAGGAGTaGGGTCCTGTGGTTGGCTCTGAACTTCTTTCCAGACTCAGAGCA | + |
|
Preference number: 1 (lower is better) Translates to: IECDKQMPHQLSAQE*GPVVGSELLSRLRA Trigger: TGCTCTGAGTCTGGAAAGAAGTTCAGAGCCAACCACAGGACCCCACTCCTGAGCTGACAGCTGGTGTGGCATCTGCTTATCACACTCGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| 3UTR TCA 90 bp | ATCAGGCCAGATGCTAAGATAAAATGGTGTCTTCTCCTTCTCAGCTaGGTTGAGTTTAGAGGGGTCTTCAGAGCTTCATCCTGCAGAGCT | + |
|
Preference number: 1 (lower is better) Translates to: IRPDAKIKWCLLLLS*VEFRGVFRASSCRA Trigger: AGCTCTGCAGGATGAAGCTCTGAAGACCCCTCTAAACTCAACTCAGCTGAGAAGGAGAAGACACCATTTTATCTTAGCATCTGGCCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| 3UTR GCA 90 bp | TTCAGAGCTTCATCCTGCAGAGCTACTGGCAAAGCAGGGTACCTTTaGTTCATATCAAAGTCCCTTTTTAATTCAAATGAGGTGCAGGTT | + |
|
Preference number: 1 (lower is better) Translates to: FRASSCRATGKAGYL*FISKSLFNSNEVQV Trigger: AACCTGCACCTCATTTGAATTAAAAAGGGACTTTGATATGAAGCAAAGGTACCCTGCTTTGCCAGTAGCTCTGCAGGATGAAGCTCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| 3UTR CAA 90 bp | CGCTCTGCGCACGCGCCTGGCTGCGCTCAGTCCTCCCGGGTGGAGTaGTCCTCGAGCGTGGGGAGGCCACCCAGGCCCAGTCCCGTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: RSAHAPGCAQSSRVE*SSSVGRPPRPSPVE Trigger: CTCCACGGGACTGGGCCTGGGTGGCCTCCCCACGCTCGAGGACAACTCCACCCGGGAGGACTGAGCGCAGCCAGGCGCGTGCGCAGAGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR-3UTR GCA 90 bp | AGCATCCCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCGCGCACGCGCCTGGCTaGGCTCAGTCCTCCCGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: SIPGGSLLLCAKRVSLPSAHAPG*AQSSRV Trigger: CACCCGGGAGGACTGAGCGCAGCCAGGCGCGTGCGC...GCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGGGATGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR-3UTR GCA 90 bp | CACGCGCCTGGCTGCGCTCAGTCCTCCCGGGTGGAGTTGTCCTCGAGCGTGGGGTCCCCGGTGGGTCACTaGTGCTCTGTGCCAAGCGCG | + |
|
Preference number: 2 (lower is better) Translates to: HAPGCAQSSRVELSSSVGSPVGH*CSVPSA Trigger: CGCGCTTGGCACAGAGCAGCAGTGACCCACCGGGGA...CCCCACGCTCGAGGACAACTCCACCCGGGAGGACTGAGCGCAGCCAGGCGCGTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGCGGGTAGAGCACCCGGGTaGGTTCAGTTCCCGGGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: PGGSLLLCAKRVSLPSPAGRAPG*VQFPGC Trigger: GCAGCCCGGGAACTGAACCCACCCGGGTGCTCTACC...CGCAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR-3UTR GCA 90 bp | CCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGCGGTCACTGCTGCTCTGTaGCAAGCGCGTGTCCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: PGGSLLLCAKRVSLPSPAVTAAL*QARVPA Trigger: GGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGAC...CGCAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCATCCCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCTGGCCGAGGACACTGTaGGCGATGTCCTGGGACAGG | + |
|
Preference number: 2 (lower is better) Translates to: SIPGGSLLLCAKRVSLPSWPRTL*AMSWDR Trigger: CCTGTCCCAGGACATCGCTCACAGTGTCCTCGGCCA...GCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGGGATGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGTCCTTTGGGTCTGGGTaGGGTTTGCTCCTCGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SPVGHCCSVPSACPCPALSFGSG*GLLLAP Trigger: AGGAGCGAGGAGCAAACCGCACCCAGACCCAAAGGA...CAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR CAA 90 bp | CCATCACTCGGCGGAGTCAAGCATCTGGTGTTGAAGAGGGGCTGCTaGCCCGCACCTTGCGGGCAGTGGGCCATGGGCTGCTCCTGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: PSLGGVKHLVLKRGC*PAPCGQWAMGCSCL Trigger: CAGACAGGAGCAGCCCATGGCCCACTGCCCGCAAGGTGCGGGCAAGCAGCCCCTCTTCAACACCAGATGCTTGACTCCGCCGAGTGATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR-3UTR GCA 90 bp | AGTCGGCAAAAAGCTGCGGCTGTGTCCATGTTGGGGATCGGGCCCATCTTGTTGGTCCCTGCCCAGCCCTaGGCTCTGCGCACGCGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: SRQKAAAVSMLGIGPILLVPAQP*ALRTRL Trigger: CAGGCGCGTGCGCAGAGCGCAGGGCTGGGCAGGGAC...CAACAAGATGGGCCCGATCCCCAACATGGACACAGCCGCAGCTTTTTGCCGACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR-3UTR GCA 90 bp | TTTGGGTCTGGGTGCGGTTTGCTCCTCGCTCCTGATGTCACAGCATTCGGGTTCGTCCCTGCCCAGCCCTaGGCTCTGCGCACGCGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: FGSGCGLLLAPDVTAFGFVPAQP*ALRTRL Trigger: CAGGCGCGTGCGCAGAGCGCAGGGCTGGGCAGGGAC...GAACCCGAATGCTGTGACATCAGGAGCGAGGAGCAAACCGCACCCAGACCCAAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGATAGGCCCCTGGCTCCCTCTGCTCGGGCTTGTGCAGGACACATACCCACCATCCCCGGTGGGTCACTaGTGCTCTGTGCCAAGCGCG | + |
|
Preference number: 2 (lower is better) Translates to: LIGPWLPLLGLVQDTYPPSPVGH*CSVPSA Trigger: CGCGCTTGGCACAGAGCAGCAGTGACCCACCGGGGA...TGGTGGGTATGTGTCCTGCACAAGCCCGAGCAGAGGGAGCCAGGGGCCTATCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR-3UTR CCA 90 bp | CTGGCTGCGCTCAGTCCTCCCGGGTGGAGTTGTCCTCGAGCGTGGGGAGGCCACGCCGTGAGCACTGTGTaGAGGAGAATGAGGACGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LAALSPPGWSCPRAWGGHAVSTV*RRMRTS Trigger: ACTCGTCCTCATTCTCCTCCACACAGTGCTCACGGC...GTGGCCTCCCCACGCTCGAGGACAACTCCACCCGGGAGGACTGAGCGCAGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTTCCTTTGGGTCTGGGTGCGGTTTGCTCCTCGCTCCTGATGTCACAGCATTCCCAAGCGCGTGTCCCTaGCCAGCCCTGCGCTCTGCG | + |
|
Preference number: 2 (lower is better) Translates to: GSFGSGCGLLLAPDVTAFPSACP*PALRSA Trigger: CGCAGAGCGCAGGGCTGGGCAGGGACACGCGCTTGG...GAATGCTGTGACATCAGGAGCGAGGAGCAAACCGCACCCAGACCCAAAGGAACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR-3UTR GCA 90 bp | AGCATCCCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCGTTACCCACAGGCCTTaGGAGAAGTCCAAGGGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: SIPGGSLLLCAKRVSLPSVTHRP*EKSKGR Trigger: TCTACCCTTGGACTTCTCGCAAGGCCTGTGGGTAAC...GCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGGGATGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR-3UTR TCA 90 bp | GCAGGTGAGCATCCCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTTCGGGCCCATCTTGTTaGATGTTACCCACAGGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: AGEHPRWVTAALCQARVPSGPSC*MLPTGL Trigger: AAGGCCTGTGGGTAACATTCAACAAGATGGGCCCGA...AGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGGGATGCTCACCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR-3UTR GCA 90 bp | GAGGACACTGTGAGCGATGTCCTGGGACAGGAGTCTCTTCTGTCCACGGTTCCTGTCACTGCTGCTCTGTaGCAAGCGCGTGTCCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: EDTVSDVLGQESLLSTVPVTAAL*QARVPA Trigger: GGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGAC...AGGAACCGTGGACAGAAGAGACTCCTGTCCCAGGACATCGCTCACAGTGTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTCGAGCGTGGGGAGGCCACCCAGGCCCAGTCCCGTGGAGTTCTGCGCTGCGGATTCGGGTTCATCATTaGTTAGGAAGGTTTCGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: PRAWGGHPGPVPWSSALRIRVHH*LGRFRR Trigger: TCTACGAAACCTTCCTAACCAATGATGAACCCGAAT...CCGCAGCGCAGAACTCCACGGGACTGGGCCTGGGTGGCCTCCCCACGCTCGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR CAA 90 bp | GTGAGCGATGTCCTGGGACAGGAGTCTCTTCTGTCCACGGTTCCTTaGGGTCTGGGTGCGGTTTGCTCCTCGCTCCTGATGTCACAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: VSDVLGQESLLSTVP*GLGAVCSSLLMSQH Trigger: ATGCTGTGACATCAGGAGCGAGGAGCAAACCGCACCCAGACCCAAAGGAACCGTGGACAGAAGAGACTCCTGTCCCAGGACATCGCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR CAA 90 bp | ACAGGAGTCTCTTCTGTCCACGGTTCCTTTGGGTCTGGGTGCGGTTaGCTCCTCGCTCCTGATGTCACAGCATTCGGGTTCATCATTGGT | + |
|
Preference number: 2 (lower is better) Translates to: TGVSSVHGSFGSGCG*LLAPDVTAFGFIIG Trigger: ACCAATGATGAACCCGAATGCTGTGACATCAGGAGCGAGGAGCAAACCGCACCCAGACCCAAAGGAACCGTGGACAGAAGAGACTCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGGGGAAGCTACTGCAATTCCCTCACACACTTTTTGCTCCTCCAGACCTGGCCAGTGTGATAAGCAGATaGCACACCAGCTGTCAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: KGKLLQFPHTLFAPPDLASVISR*HTSCQL Trigger: GAGCTGACAGCTGGTGTGGCATCTGCTTATCACACT...GGCCAGGTCTGGAGGAGCAAAAAGTGTGTGAGGGAATTGCAGTAGCTTCCCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGGGGAAGCTACTGCAATTCCCTCACACACTTTTTGCTCCTCCAGACCTGGCCAGGATGATGGGTAGTTaGAGCATCTTGTTTGTGTAC | + |
|
Preference number: 2 (lower is better) Translates to: KGKLLQFPHTLFAPPDLARMMGS*SILFVY Trigger: GTACACAAACAAGATGCTTCAACTACCCATCATCCT...GGCCAGGTCTGGAGGAGCAAAAAGTGTGTGAGGGAATTGCAGTAGCTTCCCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCGCAGGGTTAAGCATGATGCAGAGGATAGATCTGTCTGAACGAAAACGAACGCAAGCGGATGTTGTCTaGTTAGGGACAGAAGAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: VAGLSMMQRIDLSERKRTQADVV*LGTEEG Trigger: GCCTTCTTCTGTCCCTAAGCAGACAACATCCGCTTG...CGTTCGTTTTCGTTCAGACAGATCTATCCTCTGCATCATGCTTAACCCTGCGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR-3UTR TCA 90 bp | GGGTTAAGCATGATGCAGAGGATAGATCTGTCTGAACGAAAACGAACGCCTGGGTATACACTCAGCAGGTaGAATGTTCCCACAAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: GLSMMQRIDLSERKRTPGYTLSR*NVPTKE Trigger: TTCCTTTGTGGGAACATTTCACCTGCTGAGTGTATA...CCCAGGCGTTCGTTTTCGTTCAGACAGATCTATCCTCTGCATCATGCTTAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR-3UTR TCA 90 bp | CGAACAGTGATTAGACTTCTTTTTGTTCTCAGCCGCCTAGAGCTTGCTGGAGTGAATGGTGTGAGAAACTaGGTCACTTGCAGCCTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: RTVIRLLFVLSRLELAGVNGVRN*VTCSLL Trigger: TAAAAGGCTGCAAGTGACTCAGTTTCTCACACCATT...CACTCCAGCAAGCTCTAGGCGGCTGAGAACAAAAAGAAGTCTAATCACTGTTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR-3UTR TCA 90 bp | GAATCTTTAAAAAGCAGCATGATCAGGCCAGATGCTAAGATAAAATGGTGTCTTTCCTGTGGTTGGCTCTaGACTTCTTTCCAGACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: ESLKSSMIRPDAKIKWCLSCGWL*TSFQTQ Trigger: CTGAGTCTGGAAAGAAGTTCAGAGCCAACCACAGGA...AAGACACCATTTTATCTTAGCATCTGGCCTGATCATGCTGCTTTTTAAAGATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAGAATCTTTAAAAAGCAGCATGATCAGGCCAGATGCTAAGATAAAATGGTGTCTTCTCCTTCTCAGCTaGGTTGAGTTTAGAGGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: RESLKSSMIRPDAKIKWCLLLLS*VEFRGV Trigger: GACCCCTCTAAACTCAACTCAGCTGAGAAGGAGAAG...ACACCATTTTATCTTAGCATCTGGCCTGATCATGCTGCTTTTTAAAGATTCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGAATCTTTAAAAAGCAGCATGATCAGGCCAGATGCTAAGATAAAATGGTGTTTCAGAGCTTCATCCTaGAGAGCTACTGGCAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: RESLKSSMIRPDAKIKWCFRASS*RATGKA Trigger: TGCTTTGCCAGTAGCTCTGCAGGATGAAGCTCTGAA...ACACCATTTTATCTTAGCATCTGGCCTGATCATGCTGCTTTTTAAAGATTCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGAATCTTTAAAAAGCAGCATGATCAGGCCAGATGCTAAGATAAAATGGTGTAAAGCAGGGTACCTTTaGTTCATATCAAAGTCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: RESLKSSMIRPDAKIKWCKAGYL*FISKSL Trigger: AAGGGACTTTGATATGAAGCAAAGGTACCCTGCTTT...ACACCATTTTATCTTAGCATCTGGCCTGATCATGCTGCTTTTTAAAGATTCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| 3UTR-3UTR CCA 90 bp | TATTATGTGTGTGTGTGTGTATGTTTGTGTTTCCCACATAAAACTGTGAACTGCACACAGTGTATAAAATaGTGTGAGAAACTGAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: YYVCVCVCLCFPHKTVNCTQCIK*CEKLSH Trigger: GTGACTCAGTTTCTCACACCATTTTATACACTGTGT...GCAGTTCACAGTTTTATGTGGGAAACACAAACATACACACACACACACATAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR-3UTR CCA 90 bp | ATACAAACCAGTTTTAAATCAAGTAAGGGGAAGCTACTGCAATTCCCTCACACAAAACATGAAAACTTCTaGTGTTATAGCTGTGCATTG | + |
|
Preference number: 2 (lower is better) Translates to: IQTSFKSSKGKLLQFPHTKHENF*CYSCAL Trigger: CAATGCACAGCTATAACACCAGAAGTTTTCATGTTT...TGTGTGAGGGAATTGCAGTAGCTTCCCCTTACTTGATTTAAAACTGGTTTGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| 3UTR GCA 72 bp | TGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGCGCTCTaGGCACGCGCCTGGCTGCGCTCAGTCCTCCCGGGT | + |
|
Preference number: 3 (lower is better) Translates to: CAKRVSLPSPAL*ARAWLRSVLPG Trigger: ACCCGGGAGGACTGAGCGCAGCCAGGCGCGTGCGCAGAGCGCAGGGCTGGGCAGGGACACGCGCTTGGCACA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR GCA 72 bp | GTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTaGCCAGCCCTGCGCTCTGCGCACGCGCCTGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: VGHCCSVPSACP*PALRSAHAPGC Trigger: GCAGCCAGGCGCGTGCGCAGAGCGCAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCAC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| 3UTR GCA 72 bp | GCAGGTGAGCATCCCCGGTGGGTCACTGCTGCTCTGTaGCAAGCGCGTGTCCCTGCCCAGCCCTGCGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AGEHPRWVTAAL*QARVPAQPCAL Trigger: CAGAGCGCAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGGGATGCTCACCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| 3UTR CCA 72 bp | GCGCTCAGTCCTCCCGGGTGGAGTTGTCCTCGAGCGTaGGGAGGCCACCCAGGCCCAGTCCCGTGGAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ALSPPGWSCPRA*GGHPGPVPWSS Trigger: AGAACTCCACGGGACTGGGCCTGGGTGGCCTCCCCACGCTCGAGGACAACTCCACCCGGGAGGACTGAGCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR TCA 72 bp | GCACCCGGGTGGGTTCAGTTCCCGGGCTGCAGCAGGTaGGCATCCCCGGTGGGTCACTGCTGCTCTGTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: APGWVQFPGCSR*ASPVGHCCSVP Trigger: TGGCACAGAGCAGCAGTGACCCACCGGGGATGCTCACCTGCTGCAGCCCGGGAACTGAACCCACCCGGGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR GCA 72 bp | TGCTTGCCCGCACCTTGCGGGCAGTGGGCCATGGGCTaGTCCTGTCTGCCTGGCCAGGAAGAAAGAACCGGG | + |
|
Preference number: 3 (lower is better) Translates to: CLPAPCGQWAMG*SCLPGQEERTG Trigger: CCCGGTTCTTTCTTCCTGGCCAGGCAGACAGGAGCAGCCCATGGCCCACTGCCCGCAAGGTGCGGGCAAGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR GCA 72 bp | CTCGGCGGAGTCAAGCATCTGGTGTTGAAGAGGGGCTaGTTGCCCGCACCTTGCGGGCAGTGGGCCATGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LGGVKHLVLKRG*LPAPCGQWAMG Trigger: GCCCATGGCCCACTGCCCGCAAGGTGCGGGCAAGCAGCCCCTCTTCAACACCAGATGCTTGACTCCGCCGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR GCA 72 bp | CATCTGGTGTTGAAGAGGGGCTGCTTGCCCGCACCTTaGGGGCAGTGGGCCATGGGCTGCTCCTGTCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: HLVLKRGCLPAP*GQWAMGCSCLP Trigger: AGGCAGACAGGAGCAGCCCATGGCCCACTGCCCGCAAGGTGCGGGCAAGCAGCCCCTCTTCAACACCAGATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR CCA 72 bp | TTCAGTTCCCGGGCTGCAGCAGGTGAGCATCCCCGGTaGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: FSSRAAAGEHPR*VTAALCQARVP Trigger: AGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGGGATGCTCACCTGCTGCAGCCCGGGAACTGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| 3UTR TCA 72 bp | TGCTCCCATCACTCGGCGGAGTCAAGCATCTGGTGTTaGAGAGGGGCTGCTTGCCCGCACCTTGCGGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: CSHHSAESSIWC*RGAACPHLAGS Trigger: ACTGCCCGCAAGGTGCGGGCAAGCAGCCCCTCTTCAACACCAGATGCTTGACTCCGCCGAGTGATGGGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR CCA 72 bp | CTGCCTGGCCAGGAAGAAAGAACCGGGGATGGGTACTaGAGCGACCTGTCCGCGGGAGCGTTTCACTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LPGQEERTGDGY*SDLSAGAFHSF Trigger: AAAAGAGTGAAACGCTCCCGCGGACAGGTCGCTCCAGTACCCATCCCCGGTTCTTTCTTCCTGGCCAGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTAAGCATGATGCAGAGGATAGATCTGTCTGAACGAAAACGAACGCCTGGGCTGCTTGCCCGCACCTaGCGGGCAGTGGGCCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: GLSMMQRIDLSERKRTPGLLART*RAVGHG Trigger: CCCATGGCCCACTGCCCGCAAGGTGCGGGCAAGCAG...CCCAGGCGTTCGTTTTCGTTCAGACAGATCTATCCTCTGCATCATGCTTAACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR GCA 72 bp | CATGCGAGACACAGACAGAAGCAAGCGGATGTTGTCTaGTTAGGGACAGAAGAAGGCGAGGGCCAGCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: HARHRQKQADVV*LGTEEGEGQQG Trigger: GCCCTGCTGGCCCTCGCCTTCTTCTGTCCCTAAGCAGACAACATCCGCTTGCTTCTGTCTGTGTCTCGCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR GCA 72 bp | ATCGGGCCCATCTTGTTGAATGTTACCCACAGGCCTTaGGAGAAGTCCAAGGGTAGAGCACCCGGGTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: IGPILLNVTHRP*EKSKGRAPGWV Trigger: AACCCACCCGGGTGCTCTACCCTTGGACTTCTCGCAAGGCCTGTGGGTAACATTCAACAAGATGGGCCCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR GCA 72 bp | CCTCTGCTCGGGCTTGTGCAGGACACATACCCACCATaGGAGACACAGACAGAAGCAAGCGGATGTTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PLLGLVQDTYPP*ETQTEASGCCL Trigger: CAGACAACATCCGCTTGCTTCTGTCTGTGTCTCGCATGGTGGGTATGTGTCCTGCACAAGCCCGAGCAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR GCA 72 bp | CTTCTGTCCACGGTTCCTTTGGGTCTGGGTGCGGTTTaGTCCTCGCTCCTGATGTCACAGCATTCGGGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LLSTVPLGLGAV*SSLLMSQHSGS Trigger: TGAACCCGAATGCTGTGACATCAGGAGCGAGGAGCAAACCGCACCCAGACCCAAAGGAACCGTGGACAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR TCA 72 bp | GCTGTCAGCTCAGGAGTGGGGTCCTGTGGTTGGCTCTaGACTTCTTTCCAGACTCAGAGCACTTCGCCAATG | + |
|
Preference number: 3 (lower is better) Translates to: AVSSGVGSCGWL*TSFQTQSTSPM Trigger: CATTGGCGAAGTGCTCTGAGTCTGGAAAGAAGTTCAGAGCCAACCACAGGACCCCACTCCTGAGCTGACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGAACAGAAGTCTGGATTTGCGTTCTTGGTCTCTGCTCCCATCACTCGGCGATCGGGCCCATCTTGTaGAATGTTACCCACAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: GGTEVWICVLGLCSHHSAIGPIL*NVTHRP Trigger: AGGCCTGTGGGTAACATTCAACAAGATGGGCCCGAT...CGCCGAGTGATGGGAGCAGAGACCAAGAACGCAAATCCAGACTTCTGTTCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR GCA 72 bp | GGAGGAACAGAAGTCTGGATTTGCGTTCTTGGTCTCTaGTCCCATCACTCGGCGGAGTCAAGCATCTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: GGTEVWICVLGL*SHHSAESSIWC Trigger: ACACCAGATGCTTGACTCCGCCGAGTGATGGGAGCAGAGACCAAGAACGCAAATCCAGACTTCTGTTCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR GCA 72 bp | CATCACCATGATAGGGGAGGAACAGAAGTCTGGATTTaGGTTCTTGGTCTCTGCTCCCATCACTCGGCGGAG | + |
|
Preference number: 3 (lower is better) Translates to: HHHDRGGTEVWI*VLGLCSHHSAE Trigger: CTCCGCCGAGTGATGGGAGCAGAGACCAAGAACGCAAATCCAGACTTCTGTTCCTCCCCTATCATGGTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR GCA 72 bp | AAGGAAGCAGATAGCACATCGAGTGTGATAAGCAGATaGCACACCAGCTGTCAGCTCAGGAGTGGGGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: KEADSTSSVISR*HTSCQLRSGVL Trigger: CAGGACCCCACTCCTGAGCTGACAGCTGGTGTGGCATCTGCTTATCACACTCGATGTGCTATCTGCTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| 3UTR CCA 72 bp | GATAAGCAGATGCCACACCAGCTGTCAGCTCAGGAGTaGGGTCCTGTGGTTGGCTCTGAACTTCTTTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: DKQMPHQLSAQE*GPVVGSELLSR Trigger: TCTGGAAAGAAGTTCAGAGCCAACCACAGGACCCCACTCCTGAGCTGACAGCTGGTGTGGCATCTGCTTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| 3UTR-3UTR CAA 90 bp | CGAACAGTGATTAGACTTCTTTTTGTTCTCAGCCGCCTAGAGCTTGCTGGAGTGTCCCTCTGCTCGGGCTaGTGCAGGACACATACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: RTVIRLLFVLSRLELAGVSLCSG*CRTHTH Trigger: GTGGGTATGTGTCCTGCACAAGCCCGAGCAGAGGGA...CACTCCAGCAAGCTCTAGGCGGCTGAGAACAAAAAGAAGTCTAATCACTGTTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR TCA 72 bp | TTCCTTTGGGTCTGGGTGCGGTTTGCTCCTCGCTCCTaGTGTCACAGCATTCGGGTTCATCATTGGTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: FLWVWVRFAPRS*CHSIRVHHWLG Trigger: TCCTAACCAATGATGAACCCGAATGCTGTGACATCAGGAGCGAGGAGCAAACCGCACCCAGACCCAAAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR CCA 72 bp | CTCCACCATCACCATGATAGGGGAGGAACAGAAGTCTaGATTTGCGTTCTTGGTCTCTGCTCCCATCACTCG | + |
|
Preference number: 3 (lower is better) Translates to: LHHHHDRGGTEV*ICVLGLCSHHS Trigger: CGAGTGATGGGAGCAGAGACCAAGAACGCAAATCCAGACTTCTGTTCCTCCCCTATCATGGTGATGGTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR-3UTR CAA 90 bp | AGCTACTGCAATTCCCTCACACACTTTTTGCTCCTCCAGACCTGGCCCCCTGATGTTGAAGCATCTTGTTaGTGTACTGCCAGGTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SYCNSLTHFLLLQTWPPDVEASC*CTARSP Trigger: TGGAGACCTGGCAGTACACAAACAAGATGCTTCAAC...ATCAGGGGGCCAGGTCTGGAGGAGCAAAAAGTGTGTGAGGGAATTGCAGTAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTACTGGCAAAGCAGGGTACCTTTGCTTCATATCAAAGTCCCTTTTTAATTCATCCCTCACACACTTTTaGCTCCTCCAGACCTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: ATGKAGYLCFISKSLFNSSLTHF*LLQTWP Trigger: GGGCCAGGTCTGGAGGAGCAAAAAGTGTGTGAGGGA...TGAATTAAAAAGGGACTTTGATATGAAGCAAAGGTACCCTGCTTTGCCAGTAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| 3UTR TCA 72 bp | ACCTGGCCCCCTGATTTTCAAAGGATGATGGGTAGTTaGAGCATCTTGTTTGTGTACTGCCAGGTCTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TWPPDFQRMMGS*SILFVYCQVSK Trigger: TTTGGAGACCTGGCAGTACACAAACAAGATGCTTCAACTACCCATCATCCTTTGAAAATCAGGGGGCCAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| 3UTR TCA 72 bp | GATGCTAAGATAAAATGGTGTCTTCTCCTTCTCAGCTaGGTTGAGTTTAGAGGGGTCTTCAGAGCTTCATCC | + |
|
Preference number: 3 (lower is better) Translates to: DAKIKWCLLLLS*VEFRGVFRASS Trigger: GGATGAAGCTCTGAAGACCCCTCTAAACTCAACTCAGCTGAGAAGGAGAAGACACCATTTTATCTTAGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| 3UTR GCA 72 bp | TCATCCTGCAGAGCTACTGGCAAAGCAGGGTACCTTTaGTTCATATCAAAGTCCCTTTTTAATTCAAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: SSCRATGKAGYL*FISKSLFNSNE Trigger: CTCATTTGAATTAAAAAGGGACTTTGATATGAAGCAAAGGTACCCTGCTTTGCCAGTAGCTCTGCAGGATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| 3UTR CCA 72 bp | CTGGAAGAATCTGGAACCTTATGCTGGGGGCAATACTaGGATAAAATGGTACATATTCTGTATACTAGAATC | + |
|
Preference number: 3 (lower is better) Translates to: LEESGTLCWGQY*DKMVHILYTRI Trigger: GATTCTAGTATACAGAATATGTACCATTTTATCCCAGTATTGCCCCCAGCATAAGGTTCCAGATTCTTCCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR GCA 90 bp | CTCGAGCGTGGGGAGGCCACCCAGGCCCAGTCCCGTGGAGTTCTGCGCTGCGGATGCCTCGGTTGCCCTTaGTGCCGCCGCCGCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LERGEATQAQSRGVLRCGCLGCP*CRRRLP Trigger: CGGGAGGCGGCGGCGGCAGCAAGGGCAACCGAGGCA...TCCGCAGCGCAGAACTCCACGGGACTGGGCCTGGGTGGCCTCCCCACGCTCGAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR CAA 72 bp | CACGCGCCTGGCTGCGCTCAGTCCTCCCGGGTGGAGTaGTCCTCGAGCGTGGGGAGGCCACCCAGGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HAPGCAQSSRVE*SSSVGRPPRPS Trigger: ACTGGGCCTGGGTGGCCTCCCCACGCTCGAGGACAACTCCACCCGGGAGGACTGAGCGCAGCCAGGCGCGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS-3UTR GCA 90 bp | CCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGCGGGAGAGGAGTCTGTGTaGCTGGGCGGCGGGCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGGSLLLCAKRVSLPSPAGEESV*LGGGRG Trigger: TCCTCGCCCGCCGCCCAGGCACACAGACTCCTCTCC...CGCAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR CCA 90 bp | GGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGCGCTCTGCGAGGACTCCCCCATGCTaGCCAGGAGCGCGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GHCCSVPSACPCPALRSARTPPC*PGARAR Trigger: CCTGGCCCGCGCTCCTGGCCAGCATGGGGGAGTCCT...CGCAGAGCGCAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGCGCTCTGCGCACGGGAGAGGAGTCTGTGTaGCTGGGCGGCGGGCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TAALCQARVPAQPCALRTGEESV*LGGGRG Trigger: TCCTCGCCCGCCGCCCAGGCACACAGACTCCTCTCC...CGTGCGCAGAGCGCAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGCGCTCTGCGCACGTGCTGTCGCTGCCTCTaGTGCTGTCGCTGCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TAALCQARVPAQPCALRTCCRCL*CCRCRC Trigger: GCAGCGGCAGCGACAGCAGCAGAGGCAGCGACAGCA...CGTGCGCAGAGCGCAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGCGCTCTGCGCACGGGGTCCGGGTCAGCTTaGCCTCGGCGCAGAACCACA | + |
|
Preference number: 4 (lower is better) Translates to: TAALCQARVPAQPCALRTGSGSA*PRRRTT Trigger: TGTGGTTCTGCGCCGAGGCCAAGCTGACCCGGACCC...CGTGCGCAGAGCGCAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGTGAGCATCCCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTAGGACTCCCCCATGCTaGCCAGGAGCGCGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGEHPRWVTAALCQARVPRTPPC*PGARAR Trigger: CCTGGCCCGCGCTCCTGGCCAGCATGGGGGAGTCCT...AGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGGGATGCTCACCTGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR GCA 90 bp | CTGATAGGCCCCTGGCTCCCTCTGCTCGGGCTTGTGCAGGACACATACCCACCAGCGAGGACTCCCCCATaGTGGCCAGGAGCGCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIGPWLPLLGLVQDTYPPARTPP*WPGARA Trigger: GGCCCGCGCTCCTGGCCAGCATGGGGGAGTCCTCGC...TGGTGGGTATGTGTCCTGCACAAGCCCGAGCAGAGGGAGCCAGGGGCCTATCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR GCA 90 bp | CTGATAGGCCCCTGGCTCCCTCTGCTCGGGCTTGTGCAGGACACATACCCACCATGCCTCGGTTGCCCTTaGTGCCGCCGCCGCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LIGPWLPLLGLVQDTYPPCLGCP*CRRRLP Trigger: CGGGAGGCGGCGGCGGCAGCAAGGGCAACCGAGGCA...TGGTGGGTATGTGTCCTGCACAAGCCCGAGCAGAGGGAGCCAGGGGCCTATCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR CCA 90 bp | GCAGGTGAGCATCCCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTCCCGACTCCAGTTCCTaGCGCACACAGCGTCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: AGEHPRWVTAALCQARVPPDSSS*RTQRPR Trigger: GCGCGGACGCTGTGTGCGCCAGGAACTGGAGTCGGG...AGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGGGATGCTCACCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR TCA 90 bp | CCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGCGTGCTGCTGCTGTTGGTaGTGCTCTTTGTCCCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGGSLLLCAKRVSLPSPACCCCW*CSLSRV Trigger: GACCCGGGACAAAGAGCATCACCAACAGCAGCAGCA...CGCAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGAGCATCCCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTCTCTGCTGCTGTCGCTaGCGCTGCTGCTGTCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGEHPRWVTAALCQARVPLCCCR*RCCCRC Trigger: GCAGCGACAGCAGCAGCGGCAGCGACAGCAGCAGAG...AGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGGGATGCTCACCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR GCA 90 bp | CCGGCCGGGGCACAGTCTAGTGGCCGAGGACACTGTGAGCGATGTCCTGGGACATGCTGTCGCTGCCTCTaGTGCTGTCGCTGCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PAGAQSSGRGHCERCPGTCCRCL*CCRCRC Trigger: GCAGCGGCAGCGACAGCAGCAGAGGCAGCGACAGCA...TGTCCCAGGACATCGCTCACAGTGTCCTCGGCCACTAGACTGTGCCCCGGCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR CAA 72 bp | GCATCTGGTGTTGAAGAGGGGCTGCTTGCCCGCACCTaGCGGGCAGTGGGCCATGGGCTGCTCCTGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASGVEEGLLART*RAVGHGLLLSA Trigger: GGCAGACAGGAGCAGCCCATGGCCCACTGCCCGCAAGGTGCGGGCAAGCAGCCCCTCTTCAACACCAGATGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR CAA 72 bp | GGCGGAGTCAAGCATCTGGTGTTGAAGAGGGGCTGCTaGCCCGCACCTTGCGGGCAGTGGGCCATGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGVKHLVLKRGC*PAPCGQWAMGC Trigger: GCAGCCCATGGCCCACTGCCCGCAAGGTGCGGGCAAGCAGCCCCTCTTCAACACCAGATGCTTGACTCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR TCA 90 bp | GGGGCTGCTTGCCCGCACCTTGCGGGCAGTGGGCCATGGGCTGCTCCTGTCTGCGACAGTCGCCATTTCTaGGCCCGCTCTGAATCGATG | + |
|
Preference number: 4 (lower is better) Translates to: GAACPHLAGSGPWAAPVCDSRHF*ARSESM Trigger: CATCGATTCAGAGCGGGCTCAGAAATGGCGACTGTC...GCAGACAGGAGCAGCCCATGGCCCACTGCCCGCAAGGTGCGGGCAAGCAGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR TCA 90 bp | CCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGCGGCGCAGAACCACAAGTaGTCAGAGAGCAGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGGSLLLCAKRVSLPSPAAQNHK*SESRTV Trigger: CACAGTCCTGCTCTCTGATCACTTGTGGTTCTGCGC...CGCAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR GCA 90 bp | GGGTCTGGGTGCGGTTTGCTCCTCGCTCCTGATGTCACAGCATTCGGGTTCATCGCGAGGACTCCCCCATaGTGGCCAGGAGCGCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSGCGLLLAPDVTAFGFIARTPP*WPGARA Trigger: GGCCCGCGCTCCTGGCCAGCATGGGGGAGTCCTCGC...GATGAACCCGAATGCTGTGACATCAGGAGCGAGGAGCAAACCGCACCCAGACCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGCGCTCGCGCAGAACCACAAGTaGTCAGAGAGCAGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GGSLLLCAKRVSLPSPALAQNHK*SESRTV Trigger: CACAGTCCTGCTCTCTGATCACTTGTGGTTCTGCGC...GAGCGCAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR TCA 90 bp | GGGGCTGCTTGCCCGCACCTTGCGGGCAGTGGGCCATGGGCTGCTCCTGTCTGCAGAGGCCTCCGTAAATaGCTTCGTCATTGTCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GAACPHLAGSGPWAAPVCRGLRK*LRHCRA Trigger: TGCCCGACAATGACGAAGTCATTTACGGAGGCCTCT...GCAGACAGGAGCAGCCCATGGCCCACTGCCCGCAAGGTGCGGGCAAGCAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR TCA 90 bp | CCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGCGTTTGCTCCTCGCTCCTaGTGTCACAGCATTCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PGGSLLLCAKRVSLPSPAFAPRS*CHSIRV Trigger: AACCCGAATGCTGTGACATCAGGAGCGAGGAGCAAA...CGCAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR CCA 90 bp | GGATCATCCAGAGGAACTGATAGGCCCCTGGCTCCCTCTGCTCGGGCTTGTGCAAGGAGTCTGTGTGCCTaGGCGGCGGGCGAGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSSRGTDRPLAPSARACARSLCA*AAGEDS Trigger: GGAGTCCTCGCCCGCCGCCCAGGCACACAGACTCCT...TGCACAAGCCCGAGCAGAGGGAGCCAGGGGCCTATCAGTTCCTCTGGATGATCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR CCA 90 bp | GGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGCGCTCGCCGTGAGCACTGTGTaGAGGAGAATGAGGACGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGSLLLCAKRVSLPSPALAVSTV*RRMRTS Trigger: ACTCGTCCTCATTCTCCTCCACACAGTGCTCACGGC...GAGCGCAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR CAA 72 bp | CTGCTCCCATCACTCGGCGGAGTCAAGCATCTGGTGTaGAAGAGGGGCTGCTTGCCCGCACCTTGCGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLPSLGGVKHLV*KRGCLPAPCGQ Trigger: CTGCCCGCAAGGTGCGGGCAAGCAGCCCCTCTTCAACACCAGATGCTTGACTCCGCCGAGTGATGGGAGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR TCA 90 bp | GTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGCGCTCTCCCGCTCTGAATCGATaGACGGTTTCTCGTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VGHCCSVPSACPCPALRSPALNR*TVSRSP Trigger: GGGAGAACGAGAAACCGTTCATCGATTCAGAGCGGG...AGAGCGCAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR TCA 90 bp | GACGAGTACACACAGCTTCAGCCGGCCGGGGCACAGTCTAGTGGCCGAGGACACCTTCGCCTGTGCAGATaGAGCTGGAGAGGCCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: DEYTQLQPAGAQSSGRGHLRLCR*SWRGLR Trigger: ACGGAGGCCTCTCCAGCTTCATCTGCACAGGCGAAG...GTGTCCTCGGCCACTAGACTGTGCCCCGGCCGGCTGAAGCTGTGTGTACTCGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTGCGCTCAGTCCTCCCGGGTGGAGTTGTCCTCGAGCGTGGGGAGGCCACGGCGCCACACCGGCTTaGCAGAGTTTCCTAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LAALSPPGWSCPRAWGGHGATPA*QSFLEK Trigger: TTTTTCTAGGAAACTCTGCCAAGCCGGTGTGGCGCC...GTGGCCTCCCCACGCTCGAGGACAACTCCACCCGGGAGGACTGAGCGCAGCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS-3UTR CCA 90 bp | GGGTCTGGGTGCGGTTTGCTCCTCGCTCCTGATGTCACAGCATTCGGGTTCATCCCCGACTCCAGTTCCTaGCGCACACAGCGTCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GSGCGLLLAPDVTAFGFIPDSSS*RTQRPR Trigger: GCGCGGACGCTGTGTGCGCCAGGAACTGGAGTCGGG...GATGAACCCGAATGCTGTGACATCAGGAGCGAGGAGCAAACCGCACCCAGACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS-3UTR TCA 90 bp | GGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGCGCTCTGCGTTTCTGAGCCCGCTCTaGATCGATGAACGGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GHCCSVPSACPCPALRSAFLSPL*IDERFL Trigger: GAGAAACCGTTCATCGATTCAGAGCGGGCTCAGAAA...CGCAGAGCGCAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCTGCGCTCAGTCCTCCCGGGTGGAGTTGTCCTCGAGCGTGGGGAGGCCACTTTCTGAGCCCGCTCTaGATCGATGAACGGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LAALSPPGWSCPRAWGGHFLSPL*IDERFL Trigger: GAGAAACCGTTCATCGATTCAGAGCGGGCTCAGAAA...GTGGCCTCCCCACGCTCGAGGACAACTCCACCCGGGAGGACTGAGCGCAGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS-3UTR TCA 90 bp | CGGGCTGCAGCAGGTGAGCATCCCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGAGAGGCCTCCGTAAATaGCTTCGTCATTGTCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RAAAGEHPRWVTAALCQARGLRK*LRHCRA Trigger: TGCCCGACAATGACGAAGTCATTTACGGAGGCCTCT...CGCTTGGCACAGAGCAGCAGTGACCCACCGGGGATGCTCACCTGCTGCAGCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGAGCATCCCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTAAGCCGTCGTCATACTaGCGACACATCCAAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: AGEHPRWVTAALCQARVPKPSSY*RHIQAP Trigger: GGGTGCTTGGATGTGTCGGCAGTATGACGACGGCTT...AGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGGGATGCTCACCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR GCA 90 bp | TGTCCTGGGACAGGAGTCTCTTCTGTCCACGGTTCCTTTGGGTCTGGGTGCGGTTGCTGTCGCTGCCGCTaGTGCTGTCGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CPGTGVSSVHGSFGSGCGCCRCR*CCRCCC Trigger: GCAGCAGCAGCGACAGCAGCAGCGGCAGCGACAGCA...ACCGCACCCAGACCCAAAGGAACCGTGGACAGAAGAGACTCCTGTCCCAGGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS-3UTR CCA 90 bp | GAGCATCCCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGTGCAGTTCAAAGTACTaGGGCTGGACAGCCCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EHPRWVTAALCQARVPAQCSSKY*GWTAPK Trigger: TTTCGGGGCTGTCCAGCCCCAGTACTTTGAACTGCA...CTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGGGATGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR TCA 90 bp | CTGATAGGCCCCTGGCTCCCTCTGCTCGGGCTTGTGCAGGACACATACCCACCATGCTGCTGCTGTTGGTaGTGCTCTTTGTCCCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LIGPWLPLLGLVQDTYPPCCCCW*CSLSRV Trigger: GACCCGGGACAAAGAGCATCACCAACAGCAGCAGCA...TGGTGGGTATGTGTCCTGCACAAGCCCGAGCAGAGGGAGCCAGGGGCCTATCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR GCA 90 bp | GGGTGCGGTTTGCTCCTCGCTCCTGATGTCACAGCATTCGGGTTCATCATTGGTGGCCAGGAGGGCTCCTaGTGTCGCTGCCTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GCGLLLAPDVTAFGFIIGGQEGS*CRCLCC Trigger: GCAGCAGAGGCAGCGACAGCAGGAGCCCTCCTGGCC...ACCAATGATGAACCCGAATGCTGTGACATCAGGAGCGAGGAGCAAACCGCACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS-3UTR GCA 90 bp | ATTTGCGTTCTTGGTCTCTGCTCCCATCACTCGGCGGAGTCAAGCATCTGGTGTGGCCAGGAGGGCTCCTaGTGTCGCTGCCTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ICVLGLCSHHSAESSIWCGQEGS*CRCLCC Trigger: GCAGCAGAGGCAGCGACAGCAGGAGCCCTCCTGGCC...ACACCAGATGCTTGACTCCGCCGAGTGATGGGAGCAGAGACCAAGAACGCAAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR CCA 90 bp | ACTGTGAGCGATGTCCTGGGACAGGAGTCTCTTCTGTCCACGGTTCCTTTGGGTGGGTCCGGGTCAGCTTaGCCTCGGCGCAGAACCACA | + |
|
Preference number: 4 (lower is better) Translates to: TVSDVLGQESLLSTVPLGGSGSA*PRRRTT Trigger: TGTGGTTCTGCGCCGAGGCCAAGCTGACCCGGACCC...ACCCAAAGGAACCGTGGACAGAAGAGACTCCTGTCCCAGGACATCGCTCACAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS-3UTR TCA 90 bp | GGGTCTGGGTGCGGTTTGCTCCTCGCTCCTGATGTCACAGCATTCGGGTTCATCCCCGCTCTGAATCGATaGACGGTTTCTCGTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GSGCGLLLAPDVTAFGFIPALNR*TVSRSP Trigger: GGGAGAACGAGAAACCGTTCATCGATTCAGAGCGGG...GATGAACCCGAATGCTGTGACATCAGGAGCGAGGAGCAAACCGCACCCAGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS-3UTR GCA 90 bp | CGGGCTGCAGCAGGTGAGCATCCCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCCAAGCAATATTGCTTaGAAGGAATGGTCTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RAAAGEHPRWVTAALCQAPSNIA*KEWSFC Trigger: GCAGAAAGACCATTCCTTGCAAGCAATATTGCTTGG...CGCTTGGCACAGAGCAGCAGTGACCCACCGGGGATGCTCACCTGCTGCAGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR CCA 90 bp | AGTCCCGTGGAGTTCTGCGCTGCGGAGGCCGTGAGCACTGTGTGGAGGAGAATGGTCGGGCAATATGAATaGACACCTTGTCTGCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPVEFCAAEAVSTVWRRMVGQYE*TPCLHL Trigger: GAGGTGCAGACAAGGTGTCCATTCATATTGCCCGAC...CATTCTCCTCCACACAGTGCTCACGGCCTCCGCAGCGCAGAACTCCACGGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS-3UTR CCA 90 bp | ACACATACCCACCATGCGAGACACAGACAGAAGCAAGCGGATGTTGTCTGCTTACCAGGCCCAGTCCCGTaGAGTTCTGCGCTGCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: THTHHARHRQKQADVVCLPGPVP*SSALRR Trigger: CCTCCGCAGCGCAGAACTCCACGGGACTGGGCCTGG...TAAGCAGACAACATCCGCTTGCTTCTGTCTGTGTCTCGCATGGTGGGTATGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR GCA 90 bp | TTTGGGTCTGGGTGCGGTTTGCTCCTCGCTCCTGATGTCACAGCATTCGGGTTCAAGCCGTCGTCATACTaGCGACACATCCAAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: FGSGCGLLLAPDVTAFGFKPSSY*RHIQAP Trigger: GGGTGCTTGGATGTGTCGGCAGTATGACGACGGCTT...GAACCCGAATGCTGTGACATCAGGAGCGAGGAGCAAACCGCACCCAGACCCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS-3UTR GCA 90 bp | CGGGCTGCAGCAGGTGAGCATCCCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGGACTGTAAGTACTTATaGAGCACGCTTTCAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RAAAGEHPRWVTAALCQADCKYL*STLSNS Trigger: AGAGTTTGAAAGCGTGCTGCATAAGTACTTACAGTC...CGCTTGGCACAGAGCAGCAGTGACCCACCGGGGATGCTCACCTGCTGCAGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR GCA 90 bp | GAGCATCCCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGGACTGTAAGTACTTATaGAGCACGCTTTCAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: EHPRWVTAALCQARVPAQDCKYL*STLSNS Trigger: AGAGTTTGAAAGCGTGCTGCATAAGTACTTACAGTC...CTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGGGATGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGCGCTCTACCTCCAAGCAATATTaGTTGCAAGGAATGGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VGHCCSVPSACPCPALRSTSKQY*LQGMVF Trigger: AAAGACCATTCCTTGCAAGCAATATTGCTTGGAGGT...AGAGCGCAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR GCA 90 bp | GACGAGTACACACAGCTTCAGCCGGCCGGGGCACAGTCTAGTGGCCGAGGACACAATGGACACCTTGTCTaGACCTCCAAGCAATATTGC | + |
|
Preference number: 4 (lower is better) Translates to: DEYTQLQPAGAQSSGRGHNGHLV*TSKQYC Trigger: GCAATATTGCTTGGAGGTGCAGACAAGGTGTCCATT...GTGTCCTCGGCCACTAGACTGTGCCCCGGCCGGCTGAAGCTGTGTGTACTCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| 3UTR CAA 72 bp | GCGGCTGTGTCCATGTTGGGGATCGGGCCCATCTTGTaGAATGTTACCCACAGGCCTTGCGAGAAGTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AAVSMLGIGPIL*NVTHRPCEKSK Trigger: CTTGGACTTCTCGCAAGGCCTGTGGGTAACATTCAACAAGATGGGCCCGATCCCCAACATGGACACAGCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR CAA 72 bp | TCTTCTGTCCACGGTTCCTTTGGGTCTGGGTGCGGTTaGCTCCTCGCTCCTGATGTCACAGCATTCGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSVHGSFGSGCG*LLAPDVTAFGF Trigger: GAACCCGAATGCTGTGACATCAGGAGCGAGGAGCAAACCGCACCCAGACCCAAAGGAACCGTGGACAGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGAGCATCCCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTACCTCCAAGCAATATTaGTTGCAAGGAATGGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGEHPRWVTAALCQARVPTSKQY*LQGMVF Trigger: AAAGACCATTCCTTGCAAGCAATATTGCTTGGAGGT...AGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGGGATGCTCACCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR CCA 90 bp | AGTCGGCAAAAAGCTGCGGCTGTGTCCATGTTGGGGATCGGGCCCATCTTGTTGGGCGCCACACCGGCTTaGCAGAGTTTCCTAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SRQKAAAVSMLGIGPILLGATPA*QSFLEK Trigger: TTTTTCTAGGAAACTCTGCCAAGCCGGTGTGGCGCC...CAACAAGATGGGCCCGATCCCCAACATGGACACAGCCGCAGCTTTTTGCCGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR CCA 90 bp | GCAGGTGAGCATCCCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTATTCGGGTTCATCATTaGTTAGGAAGGTTTCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGEHPRWVTAALCQARVPIRVHH*LGRFRR Trigger: TCTACGAAACCTTCCTAACCAATGATGAACCCGAAT...AGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGGGATGCTCACCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| 3UTR CAA 72 bp | CACACCAGCTGTCAGCTCAGGAGTGGGGTCCTGTGGTaGGCTCTGAACTTCTTTCCAGACTCAGAGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: HTSCQLRSGVLW*ALNFFPDSEHF Trigger: GAAGTGCTCTGAGTCTGGAAAGAAGTTCAGAGCCAACCACAGGACCCCACTCCTGAGCTGACAGCTGGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| CDS-3UTR TCA 90 bp | GTCGCAGGGTTAAGCATGATGCAGAGGATAGATCTGTCTGAACGAAAACGAACGTGGCCGAGGACACTGTaGGCGATGTCCTGGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VAGLSMMQRIDLSERKRTWPRTL*AMSWDR Trigger: CCTGTCCCAGGACATCGCTCACAGTGTCCTCGGCCA...CGTTCGTTTTCGTTCAGACAGATCTATCCTCTGCATCATGCTTAACCCTGCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR GCA 90 bp | GGGTGCGGTTTGCTCCTCGCTCCTGATGTCACAGCATTCGGGTTCATCATTGGTCCTGGTAAGCCTCGATaGACTGTCTACACGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GCGLLLAPDVTAFGFIIGPGKPR*TVYTWS Trigger: TGACCACGTGTAGACAGTGCATCGAGGCTTACCAGG...ACCAATGATGAACCCGAATGCTGTGACATCAGGAGCGAGGAGCAAACCGCACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS-3UTR CCA 90 bp | AGTCGGCAAAAAGCTGCGGCTGTGTCCATGTTGGGGATCGGGCCCATCTTGTTGGTCGGGCAATATGAATaGACACCTTGTCTGCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRQKAAAVSMLGIGPILLVGQYE*TPCLHL Trigger: GAGGTGCAGACAAGGTGTCCATTCATATTGCCCGAC...CAACAAGATGGGCCCGATCCCCAACATGGACACAGCCGCAGCTTTTTGCCGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR TCA 90 bp | GGTTCCTTTGGGTCTGGGTGCGGTTTGCTCCTCGCTCCTGATGTCACAGCATTCCATTGTCGGGCAATATaGATGGACACCTTGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSFGSGCGLLLAPDVTAFHCRAI*MDTLSA Trigger: TGCAGACAAGGTGTCCATTCATATTGCCCGACAATG...GAATGCTGTGACATCAGGAGCGAGGAGCAAACCGCACCCAGACCCAAAGGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTGGGTCTGGGTGCGGTTTGCTCCTCGCTCCTGATGTCACAGCATTCGGGTCTTTGTAGACAATCTTaGAGTCCTCAGGACAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PLGLGAVCSSLLMSQHSGLCRQS*SPQDRT Trigger: AGTCCTGTCCTGAGGACTGCAAGATTGTCTACAAAG...ACCCGAATGCTGTGACATCAGGAGCGAGGAGCAAACCGCACCCAGACCCAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS-3UTR GCA 90 bp | ACACATACCCACCATGCGAGACACAGACAGAAGCAAGCGGATGTTGTCTGCTTATCCTTTGGGTCTGGGTaGGGTTTGCTCCTCGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: THTHHARHRQKQADVVCLSFGSG*GLLLAP Trigger: AGGAGCGAGGAGCAAACCGCACCCAGACCCAAAGGA...TAAGCAGACAACATCCGCTTGCTTCTGTCTGTGTCTCGCATGGTGGGTATGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR GCA 90 bp | CCACACCAGCTGTCAGCTCAGGAGTGGGGTCCTGTGGTTGGCTCTGAACTTCTTTCTTCATTCTGTCCTTaGAGTCCTCAGGACAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PHQLSAQEWGPVVGSELLSSFCP*SPQDRT Trigger: AGTCCTGTCCTGAGGACTGCAAGGACAGAATGAAGA...AAGAAGTTCAGAGCCAACCACAGGACCCCACTCCTGAGCTGACAGCTGGTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| CDS-3UTR GCA 90 bp | GCACAGTCTAGTGGCCGAGGACACTGTGAGCGATGTCCTGGGACAGGAGTCTCTCCAAGCAATATTGCTTaGAAGGAATGGTCTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AQSSGRGHCERCPGTGVSPSNIA*KEWSFC Trigger: GCAGAAAGACCATTCCTTGCAAGCAATATTGCTTGG...AGAGACTCCTGTCCCAGGACATCGCTCACAGTGTCCTCGGCCACTAGACTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGCGGTTTGCTCCTCGCTCCTGATGTCACAGCATTCGGGTTCATCATTGGTGTGACTTCAAAATACTaGGAGCAGAGCCAGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GCGLLLAPDVTAFGFIIGVTSKY*EQSQAL Trigger: CAAAGCCTGGCTCTGCTCCCAGTATTTTGAAGTCAC...ACCAATGATGAACCCGAATGCTGTGACATCAGGAGCGAGGAGCAAACCGCACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS-3UTR TCA 90 bp | ATTTGCGTTCTTGGTCTCTGCTCCCATCACTCGGCGGAGTCAAGCATCTGGTGTCATTGTCGGGCAATATaGATGGACACCTTGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ICVLGLCSHHSAESSIWCHCRAI*MDTLSA Trigger: TGCAGACAAGGTGTCCATTCATATTGCCCGACAATG...ACACCAGATGCTTGACTCCGCCGAGTGATGGGAGCAGAGACCAAGAACGCAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR TCA 90 bp | TCCACCATCACCATGATAGGGGAGGAACAGAAGTCTGGATTTGCGTTCTTGGTCCTGTGTGGAGGAGAATaGGGACGAGTACACACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: STITMIGEEQKSGFAFLVLCGGE*GRVHTA Trigger: AGCTGTGTGTACTCGTCCTCATTCTCCTCCACACAG...GACCAAGAACGCAAATCCAGACTTCTGTTCCTCCCCTATCATGGTGATGGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR CCA 90 bp | ATTTGCGTTCTTGGTCTCTGCTCCCATCACTCGGCGGAGTCAAGCATCTGGTGTGTGACTTCAAAATACTaGGAGCAGAGCCAGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ICVLGLCSHHSAESSIWCVTSKY*EQSQAL Trigger: CAAAGCCTGGCTCTGCTCCCAGTATTTTGAAGTCAC...ACACCAGATGCTTGACTCCGCCGAGTGATGGGAGCAGAGACCAAGAACGCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR GCA 90 bp | CGAACAGTGATTAGACTTCTTTTTGTTCTCAGCCGCCTAGAGCTTGCTGGAGTGCCTGGTAAGCCTCGATaGACTGTCTACACGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RTVIRLLFVLSRLELAGVPGKPR*TVYTWS Trigger: TGACCACGTGTAGACAGTGCATCGAGGCTTACCAGG...CACTCCAGCAAGCTCTAGGCGGCTGAGAACAAAAAGAAGTCTAATCACTGTTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR GCA 90 bp | ATTTGCGTTCTTGGTCTCTGCTCCCATCACTCGGCGGAGTCAAGCATCTGGTGTCTTTGTAGACAATCTTaGAGTCCTCAGGACAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: ICVLGLCSHHSAESSIWCLCRQS*SPQDRT Trigger: AGTCCTGTCCTGAGGACTGCAAGATTGTCTACAAAG...ACACCAGATGCTTGACTCCGCCGAGTGATGGGAGCAGAGACCAAGAACGCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR GCA 90 bp | TATTATGTGTGTGTGTGTGTATGTTTGTGTTTCCCACATAAAACTGTGAACTGCTGCTGTCGCTGCCGCTaGTGCTGTCGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YYVCVCVCLCFPHKTVNCCCRCR*CCRCCC Trigger: GCAGCAGCAGCGACAGCAGCAGCGGCAGCGACAGCA...GCAGTTCACAGTTTTATGTGGGAAACACAAACATACACACACACACACATAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR GCA 90 bp | GACCTGTCCGCGGGAGCGTTTCACTCTTTTATTATGTGTGTGTGTGTGTATGTTAATGGACACCTTGTCTaGACCTCCAAGCAATATTGC | + |
|
Preference number: 4 (lower is better) Translates to: DLSAGAFHSFIMCVCVYVNGHLV*TSKQYC Trigger: GCAATATTGCTTGGAGGTGCAGACAAGGTGTCCATT...AACATACACACACACACACATAATAAAAGAGTGAAACGCTCCCGCGGACAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS GCA 90 bp | GCCAGGAGCGCGGGCCAGGAGGGCTCCTGCTGTCGCTGCCTCTGCTaGTGTCGCTGCCGCTGCTGCTGTCGCTGCTGCTGCTGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ARSAGQEGSCCRCLC*CRCRCCCRCCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCGACAGCAGCAGCGGCAGCGACAGCAGCAGAGGCAGCGACAGCAGGAGCCCTCCTGGCCCGCGCTCCTGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS GCA 90 bp | CTGGCCAGGAGCGCGGGCCAGGAGGGCTCCTGCTGTCGCTGCCTCTaGTGCTGTCGCTGCCGCTGCTGCTGTCGCTGCTGCTGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LARSAGQEGSCCRCL*CCRCRCCCRCCCCC Trigger: GCAGCAGCAGCAGCAGCGACAGCAGCAGCGGCAGCGACAGCAGCAGAGGCAGCGACAGCAGGAGCCCTCCTGGCCCGCGCTCCTGGCCAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS GCA 90 bp | CCCATGCTGGCCAGGAGCGCGGGCCAGGAGGGCTCCTGCTGTCGCTaGCTCTGCTGCTGTCGCTGCCGCTGCTGCTGTCGCTGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PMLARSAGQEGSCCR*LCCCRCRCCCRCCC Trigger: GCAGCAGCAGCGACAGCAGCAGCGGCAGCGACAGCAGCAGAGGCAGCGACAGCAGGAGCCCTCCTGGCCCGCGCTCCTGGCCAGCATGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS GCA 90 bp | GAGGACTCCCCCATGCTGGCCAGGAGCGCGGGCCAGGAGGGCTCCTaGTGTCGCTGCCTCTGCTGCTGTCGCTGCCGCTGCTGCTGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: EDSPMLARSAGQEGS*CRCLCCCRCRCCCR Trigger: GCGACAGCAGCAGCGGCAGCGACAGCAGCAGAGGCAGCGACAGCAGGAGCCCTCCTGGCCCGCGCTCCTGGCCAGCATGGGGGAGTCCTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR CAA 90 bp | CTCGAGCGTGGGGAGGCCACCCAGGCCCAGTCCCGTGGAGTTCTGCGCTGCGGACGGGTCCGGGTCAGCTaGGCCTCGGCGCAGAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LERGEATQAQSRGVLRCGRVRVS*ASAQNH Trigger: GTGGTTCTGCGCCGAGGCCAAGCTGACCCGGACCCG...TCCGCAGCGCAGAACTCCACGGGACTGGGCCTGGGTGGCCTCCCCACGCTCGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS-3UTR CAA 90 bp | GGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGCGCTCTTGCCTCGGTTGCCCTaGCTGCCGCCGCCGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GGSLLLCAKRVSLPSPALLPRLP*LPPPPP Trigger: GGGAGGCGGCGGCGGCAGCAAGGGCAACCGAGGCAA...GAGCGCAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGTGAGCATCCCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTCGGGTCCGGGTCAGCTaGGCCTCGGCGCAGAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: AGEHPRWVTAALCQARVPRVRVS*ASAQNH Trigger: GTGGTTCTGCGCCGAGGCCAAGCTGACCCGGACCCG...AGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGGGATGCTCACCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGCTGCGCTCAGTCCTCCCGGGTGGAGTTGTCCTCGAGCGTGGGGAGGCCAAGAGCCCTGCTCCGGTaGTTCTTGCCTCGGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGCAQSSRVELSSSVGRPRALLR*FLPRLP Trigger: GGGCAACCGAGGCAAGAACAACCGGAGCAGGGCTCT...TGGCCTCCCCACGCTCGAGGACAACTCCACCCGGGAGGACTGAGCGCAGCCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS TCA 90 bp | CCCGACTCCAGTTCCTGGCGCACACAGCGTCCGCGCTCTCCACGGTaGAGCACTGGCCGGAGGAGGCGCCCTGGGGGTAACAAGTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: PDSSSWRTQRPRSPR*STGRRRRPGGNKSL Trigger: TAGAGACTTGTTACCCCCAGGGCGCCTCCTCCGGCCAGTGCTTCACCGTGGAGAGCGCGGACGCTGTGTGCGCCAGGAACTGGAGTCGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCGGTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGCTGTTGCTGCTGCTGTaGGTGATGCTCTTTGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SPVGHCCSVPSACPCPALLLLLL*VMLFVP Trigger: CGGGACAAAGAGCATCACCAACAGCAGCAGCAACAG...CAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCACCGGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGCGCTCTGCGCACGAGGCGCCACACCGGCTaGGCAGAGTTTCCTAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TAALCQARVPAQPCALRTRRHTG*AEFPRK Trigger: TTTTCTAGGAAACTCTGCCAAGCCGGTGTGGCGCCT...CGTGCGCAGAGCGCAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS GCA 90 bp | CTAGGCGCCACACCGGCTTGGCAGAGTTTCCTAGAAAAAGAGCCCTaGTCCGGTTGTTCTTGCCTCGGTTGCCCTTGCTGCCGCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LGATPAWQSFLEKEP*SGCSCLGCPCCRRR Trigger: GCGGCGGCGGCAGCAAGGGCAACCGAGGCAAGAACAACCGGAGCAGGGCTCTTTTTCTAGGAAACTCTGCCAAGCCGGTGTGGCGCCTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS TCA 90 bp | TGCTGCTGTTGCTGCTGCTGTTGCTGCTGTTGCTGCTGCTGTTGGTaGTGCTCTTTGTCCCGGGTCCGGGTCAGCTTGGCCTCGGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CCCCCCCCCCCCCCW*CSLSRVRVSLASAQ Trigger: CTGCGCCGAGGCCAAGCTGACCCGGACCCGGGACAAAGAGCATCACCAACAGCAGCAGCAACAGCAGCAACAGCAGCAGCAACAGCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS CCA 90 bp | AGGAGGCGCCCTGGGGGTAACAAGTCTCTAGGCGCCACACCGGCTTaGCAGAGTTTCCTAGAAAAAGAGCCCTGCTCCGGTTGTTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RRRPGGNKSLGATPA*QSFLEKEPCSGCSC Trigger: GCAAGAACAACCGGAGCAGGGCTCTTTTTCTAGGAAACTCTGCCAAGCCGGTGTGGCGCCTAGAGACTTGTTACCCCCAGGGCGCCTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGAACAGAAGTCTGGATTTGCGTTCTTGGTCTCTGCTCCCATCACTCGGCGAGAGCCCTGCTCCGGTaGTTCTTGCCTCGGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GGTEVWICVLGLCSHHSARALLR*FLPRLP Trigger: GGGCAACCGAGGCAAGAACAACCGGAGCAGGGCTCT...CGCCGAGTGATGGGAGCAGAGACCAAGAACGCAAATCCAGACTTCTGTTCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR CAA 90 bp | GTGGGTCACTGCTGCTCTGTGCCAAGCGCGTGTCCCTGCCCAGCCCTGCGCTCTCACCTCCAAGCAATATaGCTTGCAAGGAATGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VGHCCSVPSACPCPALRSHLQAI*LARNGL Trigger: AAGACCATTCCTTGCAAGCAATATTGCTTGGAGGTG...AGAGCGCAGGGCTGGGCAGGGACACGCGCTTGGCACAGAGCAGCAGTGACCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCCCAGTCCCGTGGAGTTCTGCGCTGCGGAGGCCGTGAGCACTGTGTGGAGCACCTCCAAGCAATATaGCTTGCAAGGAATGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QAQSRGVLRCGGREHCVEHLQAI*LARNGL Trigger: AAGACCATTCCTTGCAAGCAATATTGCTTGGAGGTG...CTCCACACAGTGCTCACGGCCTCCGCAGCGCAGAACTCCACGGGACTGGGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS TCA 90 bp | AAGCCTCGATGCACTGTCTACACGTGGTCATCTCACCGCCCTCCGTaGGCACCACGTCCAGACTGCAGTTCAAAGTACTGGGGCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: KPRCTVYTWSSHRPP*APRPDCSSKYWGWT Trigger: TGTCCAGCCCCAGTACTTTGAACTGCAGTCTGGACGTGGTGCTCACGGAGGGCGGTGAGATGACCACGTGTAGACAGTGCATCGAGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTGGGTCTGGGTGCGGTTTGCTCCTCGCTCCTGATGTCACAGCATTCGGGTCTGTTGCTGCTGCTGTaGGTGATGCTCTTTGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PLGLGAVCSSLLMSQHSGLLLLL*VMLFVP Trigger: CGGGACAAAGAGCATCACCAACAGCAGCAGCAACAG...ACCCGAATGCTGTGACATCAGGAGCGAGGAGCAAACCGCACCCAGACCCAAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208933.2 |
||
| CDS-3UTR CAA 90 bp | ACACATACCCACCATGCGAGACACAGACAGAAGCAAGCGGATGTTGTCTGCTTAAGGCGCCACACCGGCTaGGCAGAGTTTCCTAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: THTHHARHRQKQADVVCLRRHTG*AEFPRK Trigger: TTTTCTAGGAAACTCTGCCAAGCCGGTGTGGCGCCT...TAAGCAGACAACATCCGCTTGCTTCTGTCTGTGTCTCGCATGGTGGGTATGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110969.5 |
||
| CDS-3UTR CAA 90 bp | AGGTCCATACAAACCAGTTTTAAATCAAGTAAGGGGAAGCTACTGCAATTCCCTGTCTTCATTCTGTCCTaGCAGTCCTCAGGACAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RSIQTSFKSSKGKLLQFPVFILS*QSSGQD Trigger: GTCCTGTCCTGAGGACTGCAAGGACAGAATGAAGAC...AGGGAATTGCAGTAGCTTCCCCTTACTTGATTTAAAACTGGTTTGTATGGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207869.2 |
||
| CDS GCA 72 bp | GTCTGTGTGCCTGGGCGGCGGGCGAGGACTCCCCCATaGTGGCCAGGAGCGCGGGCCAGGAGGGCTCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: VCVPGRRARTPP*WPGARARRAPA Trigger: AGCAGGAGCCCTCCTGGCCCGCGCTCCTGGCCAGCATGGGGGAGTCCTCGCCCGCCGCCCAGGCACACAGAC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS GCA 72 bp | GCCAGGAGCGCGGGCCAGGAGGGCTCCTGCTGTCGCTaGCTCTGCTGCTGTCGCTGCCGCTGCTGCTGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: ARSAGQEGSCCR*LCCCRCRCCCR Trigger: GCGACAGCAGCAGCGGCAGCGACAGCAGCAGAGGCAGCGACAGCAGGAGCCCTCCTGGCCCGCGCTCCTGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS GCA 72 bp | AGCGCGGGCCAGGAGGGCTCCTGCTGTCGCTGCCTCTaGTGCTGTCGCTGCCGCTGCTGCTGTCGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SAGQEGSCCRCL*CCRCRCCCRCC Trigger: GCAGCAGCGACAGCAGCAGCGGCAGCGACAGCAGCAGAGGCAGCGACAGCAGGAGCCCTCCTGGCCCGCGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS TCA 72 bp | AGTTCCTGGCGCACACAGCGTCCGCGCTCTCCACGGTaGAGCACTGGCCGGAGGAGGCGCCCTGGGGGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSWRTQRPRSPR*STGRRRRPGGN Trigger: GTTACCCCCAGGGCGCCTCCTCCGGCCAGTGCTTCACCGTGGAGAGCGCGGACGCTGTGTGCGCCAGGAACT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS CAA 90 bp | CACACCGGCTTGGCAGAGTTTCCTAGAAAAAGAGCCCTGCTCCGGTaGTTCTTGCCTCGGTTGCCCTTGCTGCCGCCGCCGCCTCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: HTGLAEFPRKRALLR*FLPRLPLLPPPPPG Trigger: CCCGGGAGGCGGCGGCGGCAGCAAGGGCAACCGAGGCAAGAACAACCGGAGCAGGGCTCTTTTTCTAGGAAACTCTGCCAAGCCGGTGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS CAA 72 bp | GAGTTTCCTAGAAAAAGAGCCCTGCTCCGGTTGTTCTaGCCTCGGTTGCCCTTGCTGCCGCCGCCGCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: EFPRKRALLRLF*PRLPLLPPPPP Trigger: GGGAGGCGGCGGCGGCAGCAAGGGCAACCGAGGCAAGAACAACCGGAGCAGGGCTCTTTTTCTAGGAAACTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS CAA 90 bp | CTGTTGCTGCTGTTGCTGCTGCTGTTGCTGCTGTTGCTGCTGCTGTaGGTGATGCTCTTTGTCCCGGGTCCGGGTCAGCTTGGCCTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLLLLLLLLLLLLLL*VMLFVPGPGQLGLG Trigger: GCCGAGGCCAAGCTGACCCGGACCCGGGACAAAGAGCATCACCAACAGCAGCAGCAACAGCAGCAACAGCAGCAGCAACAGCAGCAACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS TCA 72 bp | TGCTGCTGCTGTTGCTGCTGTTGCTGCTGCTGTTGGTaGTGCTCTTTGTCCCGGGTCCGGGTCAGCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: CCCCCCCCCCCW*CSLSRVRVSLA Trigger: GGCCAAGCTGACCCGGACCCGGGACAAAGAGCATCACCAACAGCAGCAGCAACAGCAGCAACAGCAGCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS GCA 72 bp | CCTGAGCGTGGTGGTCGTAGTCCTGGTAAGCCTCGATaGACTGTCTACACGTGGTCATCTCACCGCCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PERGGRSPGKPR*TVYTWSSHRPP Trigger: CGGAGGGCGGTGAGATGACCACGTGTAGACAGTGCATCGAGGCTTACCAGGACTACGACCACCACGCTCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS CCA 72 bp | GTTGGTGATGCTCTTTGTCCCGGGTCCGGGTCAGCTTaGCCTCGGCGCAGAACCACAAGTGATCAGAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VGDALCPGSGSA*PRRRTTSDQRA Trigger: TGCTCTCTGATCACTTGTGGTTCTGCGCCGAGGCCAAGCTGACCCGGACCCGGGACAAAGAGCATCACCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS CAA 72 bp | TTGGCAGAGTTTCCTAGAAAAAGAGCCCTGCTCCGGTaGTTCTTGCCTCGGTTGCCCTTGCTGCCGCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LAEFPRKRALLR*FLPRLPLLPPP Trigger: CGGCGGCGGCAGCAAGGGCAACCGAGGCAAGAACAACCGGAGCAGGGCTCTTTTTCTAGGAAACTCTGCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS CCA 72 bp | CCTGGGGGTAACAAGTCTCTAGGCGCCACACCGGCTTaGCAGAGTTTCCTAGAAAAAGAGCCCTGCTCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PGGNKSLGATPA*QSFLEKEPCSG Trigger: ACCGGAGCAGGGCTCTTTTTCTAGGAAACTCTGCCAAGCCGGTGTGGCGCCTAGAGACTTGTTACCCCCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS CAA 72 bp | CTGTTGCTGCTGCTGTTGCTGCTGTTGCTGCTGCTGTaGGTGATGCTCTTTGTCCCGGGTCCGGGTCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLLLLLLLLLLL*VMLFVPGPGQL Trigger: AAGCTGACCCGGACCCGGGACAAAGAGCATCACCAACAGCAGCAGCAACAGCAGCAACAGCAGCAGCAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS TCA 72 bp | TGCACTGTCTACACGTGGTCATCTCACCGCCCTCCGTaGGCACCACGTCCAGACTGCAGTTCAAAGTACTGG | + |
|
Preference number: 6 (lower is better) Translates to: CTVYTWSSHRPP*APRPDCSSKYW Trigger: CCAGTACTTTGAACTGCAGTCTGGACGTGGTGCTCACGGAGGGCGGTGAGATGACCACGTGTAGACAGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||
| CDS GCA 72 bp | ACACCGGCTTGGCAGAGTTTCCTAGAAAAAGAGCCCTaGTCCGGTTGTTCTTGCCTCGGTTGCCCTTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TPAWQSFLEKEP*SGCSCLGCPCC Trigger: GCAGCAAGGGCAACCGAGGCAAGAACAACCGGAGCAGGGCTCTTTTTCTAGGAAACTCTGCCAAGCCGGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110969.5 ENSMUST00000208933.2 |
||