Pregenerated sensors for FAM151B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034334Ensembl transcript IDs: ENSMUST00000040106.9, ENSMUST00000225299.2
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGTCACGTCCGGGAAGAAGGATGTCACGGTGTCTAGAAAGGCTTTaGCATCCACTACTTTGCTGCTCCCATTTGGCCCGGGAAGAATAT | + |
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Preference number: 1 (lower is better) Translates to: RSRPGRRMSRCLERL*HPLLCCSHLAREEY Trigger: ATATTCTTCCCGGGCCAAATGGGAGCAGCAAAGTAGTGGATGCCAAAGCCTTTCTAGACACCGTGACATCCTTCTTCCCGGACGTGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225299.2 |
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| 3UTR TCA 90 bp | ACAGTTAAGCTGTACCTGTTTGATTTTGTCAATAGCCAGAGCAACTaGGGACACGACTGCCTCACTAAAGCTGCCCTGACAGGGAACGTG | + |
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Preference number: 1 (lower is better) Translates to: TVKLYLFDFVNSQSN*GHDCLTKAALTGNV Trigger: CACGTTCCCTGTCAGGGCAGCTTTAGTGAGGCAGTCGTGTCCTCAGTTGCTCTGGCTATTGACAAAATCAAACAGGTACAGCTTAACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225299.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGATGCCATCCTGTTGTCCAACCCAAGGAAAAGGTCACGTCCGGGAAGAAGTTTGCTGCTCCCATTTaGCCCGGGAAGAATATCGGC | + |
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Preference number: 2 (lower is better) Translates to: SGCHPVVQPKEKVTSGKKFAAPI*PGKNIG Trigger: GCCGATATTCTTCCCGGGCCAAATGGGAGCAGCAAA...CTTCTTCCCGGACGTGACCTTTTCCTTGGGTTGGACAACAGGATGGCATCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225299.2 |
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| 3UTR CAA 90 bp | AAGGTCACGTCCGGGAAGAAGGATGTCACGGTGTCTAGAAAGGCTTaGGCATCCACTACTTTGCTGCTCCCATTTGGCCCGGGAAGAATA | + |
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Preference number: 2 (lower is better) Translates to: KVTSGKKDVTVSRKA*ASTTLLLPFGPGRI Trigger: TATTCTTCCCGGGCCAAATGGGAGCAGCAAAGTAGTGGATGCCAAAGCCTTTCTAGACACCGTGACATCCTTCTTCCCGGACGTGACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225299.2 |
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| 3UTR CAA 90 bp | AAGAAGGATGTCACGGTGTCTAGAAAGGCTTTGGCATCCACTACTTaGCTGCTCCCATTTGGCCCGGGAAGAATATCGGCATTAATCCAC | + |
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Preference number: 2 (lower is better) Translates to: KKDVTVSRKALASTT*LLPFGPGRISALIH Trigger: GTGGATTAATGCCGATATTCTTCCCGGGCCAAATGGGAGCAGCAAAGTAGTGGATGCCAAAGCCTTTCTAGACACCGTGACATCCTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225299.2 |
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| 3UTR CAA 90 bp | AATAAATGTCATCTTTTCCAGTCCAAACAGTTAAGCTGTACCTGTTaGATTTTGTCAATAGCCAGAGCAACTGAGGACACGACTGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: NKCHLFQSKQLSCTC*ILSIARATEDTTAS Trigger: TGAGGCAGTCGTGTCCTCAGTTGCTCTGGCTATTGACAAAATCAAACAGGTACAGCTTAACTGTTTGGACTGGAAAAGATGACATTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225299.2 |
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| 3UTR GCA 72 bp | TCACGGTGTCTAGAAAGGCTTTGGCATCCACTACTTTaGTGCTCCCATTTGGCCCGGGAAGAATATCGGCAT | + |
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Preference number: 3 (lower is better) Translates to: SRCLERLWHPLL*CSHLAREEYRH Trigger: ATGCCGATATTCTTCCCGGGCCAAATGGGAGCAGCAAAGTAGTGGATGCCAAAGCCTTTCTAGACACCGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225299.2 |
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| 3UTR CCA 72 bp | AAAGGCTTTGGCATCCACTACTTTGCTGCTCCCATTTaGCCCGGGAAGAATATCGGCATTAATCCACACGGG | + |
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Preference number: 3 (lower is better) Translates to: KGFGIHYFAAPI*PGKNIGINPHG Trigger: CCCGTGTGGATTAATGCCGATATTCTTCCCGGGCCAAATGGGAGCAGCAAAGTAGTGGATGCCAAAGCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225299.2 |
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| 3UTR-3UTR CAA 90 bp | AAACAGTTAAGCTGTACCTGTTTGATTTTGTCAATAGCCAGAGCAACTGAGGACCAGGATGCCATCCTGTaGTCCAACCCAAGGAAAAGG | + |
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Preference number: 3 (lower is better) Translates to: KQLSCTCLILSIARATEDQDAIL*SNPRKR Trigger: CCTTTTCCTTGGGTTGGACAACAGGATGGCATCCTG...GTCCTCAGTTGCTCTGGCTATTGACAAAATCAAACAGGTACAGCTTAACTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225299.2 |
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| CDS-3UTR GCA 90 bp | TCAGGATGCCATCCTGTTGTCCAACCCAAGGAAAAGGTCACGTCCGGGAAGAAGGGACGCTCTGACTGCTaGCAGATCTTCAGCGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: SGCHPVVQPKEKVTSGKKGRSDC*QIFSAS Trigger: CGAGGCGCTGAAGATCTGGCAGCAGTCAGAGCGTCC...CTTCTTCCCGGACGTGACCTTTTCCTTGGGTTGGACAACAGGATGGCATCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225299.2 |
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| CDS-3UTR TCA 90 bp | GCCATCCTGTTGTCCAACCCAAGGAAAAGGTCACGTCCGGGAAGAAGGATGTCAAGCGCCTCGTTCATCTaGGACTTGTGGTTGGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: AILLSNPRKRSRPGRRMSSASFI*DLWLAA Trigger: CGCAGCCAACCACAAGTCTCAGATGAACGAGGCGCT...TGACATCCTTCTTCCCGGACGTGACCTTTTCCTTGGGTTGGACAACAGGATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225299.2 |
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| 3UTR CAA 72 bp | TCCGGGAAGAAGGATGTCACGGTGTCTAGAAAGGCTTaGGCATCCACTACTTTGCTGCTCCCATTTGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: SGKKDVTVSRKA*ASTTLLLPFGP Trigger: CGGGCCAAATGGGAGCAGCAAAGTAGTGGATGCCAAAGCCTTTCTAGACACCGTGACATCCTTCTTCCCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225299.2 |
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| 3UTR CAA 72 bp | GTCACGGTGTCTAGAAAGGCTTTGGCATCCACTACTTaGCTGCTCCCATTTGGCCCGGGAAGAATATCGGCA | + |
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Preference number: 4 (lower is better) Translates to: VTVSRKALASTT*LLPFGPGRISA Trigger: TGCCGATATTCTTCCCGGGCCAAATGGGAGCAGCAAAGTAGTGGATGCCAAAGCCTTTCTAGACACCGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225299.2 |
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| CDS-3UTR TCA 90 bp | GCATATGTAGTCCATCTCTTTCACCATCGACCAACTGTAGCCTTCATTGACTTTCGCCGTCTTCTGCCGTaGTCTGGTTGTTCCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: AYVVHLFHHRPTVAFIDFRRLLP*SGCSSE Trigger: TTCTGAGGAACAACCAGATCACGGCAGAAGACGGCG...AAAGTCAATGAAGGCTACAGTTGGTCGATGGTGAAAGAGATGGACTACATATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225299.2 |
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| 3UTR CAA 72 bp | CATCTTTTCCAGTCCAAACAGTTAAGCTGTACCTGTTaGATTTTGTCAATAGCCAGAGCAACTGAGGACACG | + |
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Preference number: 4 (lower is better) Translates to: HLFQSKQLSCTC*ILSIARATEDT Trigger: CGTGTCCTCAGTTGCTCTGGCTATTGACAAAATCAAACAGGTACAGCTTAACTGTTTGGACTGGAAAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225299.2 |
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| CDS-3UTR CCA 90 bp | CAGTTAAGCTGTACCTGTTTGATTTTGTCAATAGCCAGAGCAACTGAGGACACGTCTTCTGCCGTGATCTaGTTGTTCCTCAGAAAATAT | + |
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Preference number: 4 (lower is better) Translates to: QLSCTCLILSIARATEDTSSAVI*LFLRKY Trigger: ATATTTTCTGAGGAACAACCAGATCACGGCAGAAGA...CGTGTCCTCAGTTGCTCTGGCTATTGACAAAATCAAACAGGTACAGCTTAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225299.2 |
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| CDS TCA 90 bp | CATGGACGCTCTGACTGCTGCCAGATCTTCAGCGCCTCGTTCATCTaGGACTTGTGGTTGGCTGCGTGGGACCAGAGGATCTCAGCGCCG | + |
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Preference number: 5 (lower is better) Translates to: HGRSDCCQIFSASFI*DLWLAAWDQRISAP Trigger: CGGCGCTGAGATCCTCTGGTCCCACGCAGCCAACCACAAGTCTCAGATGAACGAGGCGCTGAAGATCTGGCAGCAGTCAGAGCGTCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225299.2 |
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| CDS GCA 90 bp | GGCAGCACTCTTCAGCGCCTCGTTCATCTGAGACTTGTGGTTGGCTaGGTGGGACCAGAGGATCTCAGCGCCGTCTTCTGCCGTGATCTG | + |
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Preference number: 5 (lower is better) Translates to: GSTLQRLVHLRLVVG*VGPEDLSAVFCRDL Trigger: CAGATCACGGCAGAAGACGGCGCTGAGATCCTCTGGTCCCACGCAGCCAACCACAAGTCTCAGATGAACGAGGCGCTGAAGAGTGCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS TCA 90 bp | TCAGCCTCTATCATGTGGGCAGCACTCTTCAGCGCCTCGTTCATCTaGGACTTGTGGTTGGCTGCGTGGGACCAGAGGATCTCAGCGCCG | + |
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Preference number: 5 (lower is better) Translates to: SASIMWAALFSASFI*DLWLAAWDQRISAP Trigger: CGGCGCTGAGATCCTCTGGTCCCACGCAGCCAACCACAAGTCTCAGATGAACGAGGCGCTGAAGAGTGCTGCCCACATGATAGAGGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS GCA 90 bp | CTGCCAGATCTTCAGCGCCTCGTTCATCTGAGACTTGTGGTTGGCTaGGTGGGACCAGAGGATCTCAGCGCCGTCTTCTGCCGTGATCTG | + |
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Preference number: 5 (lower is better) Translates to: LPDLQRLVHLRLVVG*VGPEDLSAVFCRDL Trigger: CAGATCACGGCAGAAGACGGCGCTGAGATCCTCTGGTCCCACGCAGCCAACCACAAGTCTCAGATGAACGAGGCGCTGAAGATCTGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225299.2 |
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| CDS GCA 90 bp | CCGGGAAGAATATCGGCATTAATCCACACGGGGCGCTGCAGGTGCTaGTTCATGTTGTCCAGGAACAGCATGGACGCTCTGACTGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: PGRISALIHTGRCRC*FMLSRNSMDALTAA Trigger: GGCAGCAGTCAGAGCGTCCATGCTGTTCCTGGACAACATGAAGCAGCACCTGCAGCGCCCCGTGTGGATTAATGCCGATATTCTTCCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS GCA 90 bp | GGCCCGGGAAGAATATCGGCATTAATCCACACGGGGCGCTGCAGGTaGTGCTTCATGTTGTCCAGGAACAGCATGGACGCTCTGACTGCT | + |
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Preference number: 5 (lower is better) Translates to: GPGRISALIHTGRCR*CFMLSRNSMDALTA Trigger: AGCAGTCAGAGCGTCCATGCTGTTCCTGGACAACATGAAGCAGCACCTGCAGCGCCCCGTGTGGATTAATGCCGATATTCTTCCCGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS TCA 90 bp | ACTGCTTGTCTCAGGAGGATGGGCCATGATTGGCTGGCCATGCTCTaGTCCGTCACTAGGAAGAAGGACATCAGCCTCTATCATGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: TACLRRMGHDWLAML*SVTRKKDISLYHVG Trigger: GCCCACATGATAGAGGCTGATGTCCTTCTTCCTAGTGACGGATCAGAGCATGGCCAGCCAATCATGGCCCATCCTCCTGAGACAAGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS CCA 90 bp | GCCAGCCACTCCTGCAAAGTGTTATCACTGCTTGTCTCAGGAGGATaGGCCATGATTGGCTGGCCATGCTCTGATCCGTCACTAGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: ASHSCKVLSLLVSGG*AMIGWPCSDPSLGR Trigger: TCTTCCTAGTGACGGATCAGAGCATGGCCAGCCAATCATGGCCCATCCTCCTGAGACAAGCAGTGATAACACTTTGCAGGAGTGGCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS GCA 90 bp | TTATCACTGCTTGTCTCAGGAGGATGGGCCATGATTGGCTGGCCATaGTCTGATCCGTCACTAGGAAGAAGGACATCAGCCTCTATCATG | + |
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Preference number: 5 (lower is better) Translates to: LSLLVSGGWAMIGWP*SDPSLGRRTSASIM Trigger: CATGATAGAGGCTGATGTCCTTCTTCCTAGTGACGGATCAGAGCATGGCCAGCCAATCATGGCCCATCCTCCTGAGACAAGCAGTGATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS GCA 90 bp | CAGGTGCTGCTTCATGTTGTCCAGGAACAGCATGGACGCTCTGACTaGTGCCAGACTCTTGAAATCCAACTTGATGCCCTTGTTGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: QVLLHVVQEQHGRSD*CQTLEIQLDALVAL Trigger: AAGAGCAACAAGGGCATCAAGTTGGATTTCAAGAGTCTGGCAGCAGTCAGAGCGTCCATGCTGTTCCTGGACAACATGAAGCAGCACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS CCA 90 bp | AAAGTGTTATCACTGCTTGTCTCAGGAGGATGGGCCATGATTGGCTaGCCATGCTCTGATCCGTCACTAGGAAGAAGGACATCAGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: KVLSLLVSGGWAMIG*PCSDPSLGRRTSAS Trigger: AGAGGCTGATGTCCTTCTTCCTAGTGACGGATCAGAGCATGGCCAGCCAATCATGGCCCATCCTCCTGAGACAAGCAGTGATAACACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS GCA 90 bp | AACTTGATGCCCTTGTTGCTCTTCACAACCTCAGCCAGCCACTCCTaGAAAGTGTTATCACTGCTTGTCTCAGGAGGATGGGCCATGATT | + |
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Preference number: 5 (lower is better) Translates to: NLMPLLLFTTSASHS*KVLSLLVSGGWAMI Trigger: AATCATGGCCCATCCTCCTGAGACAAGCAGTGATAACACTTTGCAGGAGTGGCTGGCTGAGGTTGTGAAGAGCAACAAGGGCATCAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS CCA 90 bp | GCTGCGTGGGACCAGAGGATCTCAGCGCCGTCTTCTGCCGTGATCTaGTTGTTCCTCAGAAAATATTTCAGTATATTTTCACTCCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: AAWDQRISAPSSAVI*LFLRKYFSIFSLQD Trigger: ATCCTGGAGTGAAAATATACTGAAATATTTTCTGAGGAACAACCAGATCACGGCAGAAGACGGCGCTGAGATCCTCTGGTCCCACGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040106.9 ENSMUST00000225299.2 |
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| CDS GCA 72 bp | CTTCAGCGCCTCGTTCATCTGAGACTTGTGGTTGGCTaGGTGGGACCAGAGGATCTCAGCGCCGTCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LQRLVHLRLVVG*VGPEDLSAVFC Trigger: GCAGAAGACGGCGCTGAGATCCTCTGGTCCCACGCAGCCAACCACAAGTCTCAGATGAACGAGGCGCTGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040106.9 ENSMUST00000225299.2 |
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| CDS CCA 72 bp | CACTCTTCAGCGCCTCGTTCATCTGAGACTTGTGGTTaGCTGCGTGGGACCAGAGGATCTCAGCGCCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: HSSAPRSSETCG*LRGTRGSQRRL Trigger: AAGACGGCGCTGAGATCCTCTGGTCCCACGCAGCCAACCACAAGTCTCAGATGAACGAGGCGCTGAAGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS CCA 72 bp | AGATCTTCAGCGCCTCGTTCATCTGAGACTTGTGGTTaGCTGCGTGGGACCAGAGGATCTCAGCGCCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: RSSAPRSSETCG*LRGTRGSQRRL Trigger: AAGACGGCGCTGAGATCCTCTGGTCCCACGCAGCCAACCACAAGTCTCAGATGAACGAGGCGCTGAAGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225299.2 |
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| CDS CAA 90 bp | ATATCGGCATTAATCCACACGGGGCGCTGCAGGTGCTGCTTCATGTaGTCCAGGAACAGCATGGACGCTCTGACTGCTGCCAGACTCTTG | + |
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Preference number: 6 (lower is better) Translates to: ISALIHTGRCRCCFM*SRNSMDALTAARLL Trigger: CAAGAGTCTGGCAGCAGTCAGAGCGTCCATGCTGTTCCTGGACAACATGAAGCAGCACCTGCAGCGCCCCGTGTGGATTAATGCCGATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS GCA 72 bp | ATATCGGCATTAATCCACACGGGGCGCTGCAGGTGCTaGTTCATGTTGTCCAGGAACAGCATGGACGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: ISALIHTGRCRC*FMLSRNSMDAL Trigger: CAGAGCGTCCATGCTGTTCCTGGACAACATGAAGCAGCACCTGCAGCGCCCCGTGTGGATTAATGCCGATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS TCA 72 bp | CTCAGGAGGATGGGCCATGATTGGCTGGCCATGCTCTaGTCCGTCACTAGGAAGAAGGACATCAGCCTCTAT | + |
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Preference number: 6 (lower is better) Translates to: LRRMGHDWLAML*SVTRKKDISLY Trigger: ATAGAGGCTGATGTCCTTCTTCCTAGTGACGGATCAGAGCATGGCCAGCCAATCATGGCCCATCCTCCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS GCA 72 bp | GGCTGCGTGGGACCAGAGGATCTCAGCGCCGTCTTCTaGCGTGATCTGGTTGTTCCTCAGAAAATATTTCAG | + |
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Preference number: 6 (lower is better) Translates to: GCVGPEDLSAVF*RDLVVPQKIFQ Trigger: CTGAAATATTTTCTGAGGAACAACCAGATCACGGCAGAAGACGGCGCTGAGATCCTCTGGTCCCACGCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040106.9 ENSMUST00000225299.2 |
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| CDS GCA 72 bp | AGAATATCGGCATTAATCCACACGGGGCGCTGCAGGTaGTGCTTCATGTTGTCCAGGAACAGCATGGACGCT | + |
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Preference number: 6 (lower is better) Translates to: RISALIHTGRCR*CFMLSRNSMDA Trigger: AGCGTCCATGCTGTTCCTGGACAACATGAAGCAGCACCTGCAGCGCCCCGTGTGGATTAATGCCGATATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS CCA 72 bp | TCACTGCTTGTCTCAGGAGGATGGGCCATGATTGGCTaGCCATGCTCTGATCCGTCACTAGGAAGAAGGACA | + |
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Preference number: 6 (lower is better) Translates to: SLLVSGGWAMIG*PCSDPSLGRRT Trigger: TGTCCTTCTTCCTAGTGACGGATCAGAGCATGGCCAGCCAATCATGGCCCATCCTCCTGAGACAAGCAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS CAA 90 bp | AACAGCATGGACGCTCTGACTGCTGCCAGACTCTTGAAATCCAACTaGATGCCCTTGTTGCTCTTCACAACCTCAGCCAGCCACTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: NSMDALTAARLLKSN*MPLLLFTTSASHSC Trigger: GCAGGAGTGGCTGGCTGAGGTTGTGAAGAGCAACAAGGGCATCAAGTTGGATTTCAAGAGTCTGGCAGCAGTCAGAGCGTCCATGCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS GCA 72 bp | CCCTTGTTGCTCTTCACAACCTCAGCCAGCCACTCCTaGAAAGTGTTATCACTGCTTGTCTCAGGAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: PLLLFTTSASHS*KVLSLLVSGGW Trigger: CCATCCTCCTGAGACAAGCAGTGATAACACTTTGCAGGAGTGGCTGGCTGAGGTTGTGAAGAGCAACAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS CAA 72 bp | GACGCTCTGACTGCTGCCAGACTCTTGAAATCCAACTaGATGCCCTTGTTGCTCTTCACAACCTCAGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: DALTAARLLKSN*MPLLLFTTSAS Trigger: GCTGGCTGAGGTTGTGAAGAGCAACAAGGGCATCAAGTTGGATTTCAAGAGTCTGGCAGCAGTCAGAGCGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS CAA 90 bp | GACGCTCTGACTGCTGCCAGACTCTTGAAATCCAACTTGATGCCCTaGTTGCTCTTCACAACCTCAGCCAGCCACTCCTGCAAAGTGTTA | + |
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Preference number: 6 (lower is better) Translates to: DALTAARLLKSNLMP*LLFTTSASHSCKVL Trigger: TAACACTTTGCAGGAGTGGCTGGCTGAGGTTGTGAAGAGCAACAAGGGCATCAAGTTGGATTTCAAGAGTCTGGCAGCAGTCAGAGCGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS CAA 90 bp | GCGTGGGACCAGAGGATCTCAGCGCCGTCTTCTGCCGTGATCTGGTaGTTCCTCAGAAAATATTTCAGTATATTTTCACTCCAGGATCCC | + |
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Preference number: 6 (lower is better) Translates to: AWDQRISAPSSAVIW*FLRKYFSIFSLQDP Trigger: GGGATCCTGGAGTGAAAATATACTGAAATATTTTCTGAGGAACAACCAGATCACGGCAGAAGACGGCGCTGAGATCCTCTGGTCCCACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040106.9 ENSMUST00000225299.2 |
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| CDS CAA 90 bp | GCTCTGACTGCTGCCAGACTCTTGAAATCCAACTTGATGCCCTTGTaGCTCTTCACAACCTCAGCCAGCCACTCCTGCAAAGTGTTATCA | + |
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Preference number: 6 (lower is better) Translates to: ALTAARLLKSNLMPL*LFTTSASHSCKVLS Trigger: TGATAACACTTTGCAGGAGTGGCTGGCTGAGGTTGTGAAGAGCAACAAGGGCATCAAGTTGGATTTCAAGAGTCTGGCAGCAGTCAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS GCA 72 bp | CATGTTGTCCAGGAACAGCATGGACGCTCTGACTGCTaGCAGACTCTTGAAATCCAACTTGATGCCCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: HVVQEQHGRSDC*QTLEIQLDALV Trigger: AACAAGGGCATCAAGTTGGATTTCAAGAGTCTGGCAGCAGTCAGAGCGTCCATGCTGTTCCTGGACAACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS GCA 72 bp | CTTCATGTTGTCCAGGAACAGCATGGACGCTCTGACTaGTGCCAGACTCTTGAAATCCAACTTGATGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: LHVVQEQHGRSD*CQTLEIQLDAL Trigger: AAGGGCATCAAGTTGGATTTCAAGAGTCTGGCAGCAGTCAGAGCGTCCATGCTGTTCCTGGACAACATGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS CAA 72 bp | AGGAACAGCATGGACGCTCTGACTGCTGCCAGACTCTaGAAATCCAACTTGATGCCCTTGTTGCTCTTCACA | + |
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Preference number: 6 (lower is better) Translates to: RNSMDALTAARL*KSNLMPLLLFT Trigger: TGTGAAGAGCAACAAGGGCATCAAGTTGGATTTCAAGAGTCTGGCAGCAGTCAGAGCGTCCATGCTGTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040106.9 |
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| CDS TCA 72 bp | CGTGGGACCAGAGGATCTCAGCGCCGTCTTCTGCCGTaGTCTGGTTGTTCCTCAGAAAATATTTCAGTATAT | + |
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Preference number: 6 (lower is better) Translates to: RGTRGSQRRLLP*SGCSSENISVY Trigger: ATATACTGAAATATTTTCTGAGGAACAACCAGATCACGGCAGAAGACGGCGCTGAGATCCTCTGGTCCCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040106.9 ENSMUST00000225299.2 |
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