RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM149B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000039599

Ensembl transcript IDs: ENSMUST00000037698.13, ENSMUST00000051915.7, ENSMUST00000090499.13, ENSMUST00000090503.12, ENSMUST00000224110.2, ENSMUST00000224721.2, ENSMUST00000224930.2, ENSMUST00000225597.2, ENSMUST00000225834.2, ENSMUST00000225942.2, ENSMUST00000225991.2

Found 377 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCACTTGCCCTGTaGTCATTGCCTGGTTCTAGAGATGGGTCCACCTCTGCTCTGAGG +
Preference number: 1 (lower is better)
Translates to: VLPSLLQPCRFSLAL*SLPGSRDGSTSALR
Trigger: CCTCAGAGCAGAGGTGGACCCATCTCTAGAACCAGGCAATGACCACAGGGCAAGTGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR TCA 90 bp TGTTTGCAGGAGCTGTGCATCATCCGGTGCCTGAATGCTGGGGCATaGAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGT +
Preference number: 1 (lower is better)
Translates to: CLQELCIIRCLNAGA*KASMCSQVCCNLAG
Trigger: ACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCCCCAGCATTCAGGCACCGGATGATGCACAGCTCCTGCAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR CCA 90 bp AAGCTGCTGTTTGCAGGAGCTGTGCATCATCCGGTGCCTGAATGCTaGGGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCT +
Preference number: 1 (lower is better)
Translates to: KLLFAGAVHHPVPEC*GMKSLHVLPSLLQP
Trigger: AGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCCCCAGCATTCAGGCACCGGATGATGCACAGCTCCTGCAAACAGCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR CCA 90 bp GCTAAGCAGCTGCTTTATCTCCCACTGGGTTTGTCTATGAAGGGGTaGGGAAGTGAGCGTGTGCACATGCCAAGGCGAGTGCGTAGGCAT +
Preference number: 1 (lower is better)
Translates to: AKQLLYLPLGLSMKG*GSERVHMPRRVRRH
Trigger: ATGCCTACGCACTCGCCTTGGCATGTGCACACGCTCACTTCCCCACCCCTTCATAGACAAACCCAGTGGGAGATAAAGCAGCTGCTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR TCA 90 bp CACTACAAGCTAAGCAGCTGCTTTATCTCCCACTGGGTTTGTCTATaGAGGGGTGGGGAAGTGAGCGTGTGCACATGCCAAGGCGAGTGC +
Preference number: 1 (lower is better)
Translates to: HYKLSSCFISHWVCL*RGGEVSVCTCQGEC
Trigger: GCACTCGCCTTGGCATGTGCACACGCTCACTTCCCCACCCCTTCATAGACAAACCCAGTGGGAGATAAAGCAGCTGCTTAGCTTGTAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR TCA 90 bp AGAGCCCCTGCCAGGTCGGGCCTGATGAGGATACTCAGATGCACATaGACTTCGGTACTGTGTGTCTGGCAGAAACGACTGAGTTGTGTT +
Preference number: 1 (lower is better)
Translates to: RAPARSGLMRILRCT*TSVLCVWQKRLSCV
Trigger: AACACAACTCAGTCGTTTCTGCCAGACACACAGTACCGAAGTTCATGTGCATCTGAGTATCCTCATCAGGCCCGACCTGGCAGGGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR GCA 90 bp AGCCCTGACGTCTTAGAGCCAGACCTGATAGTACAGGCTGGTCAATaGCAGCTACTCAAGAGGCTGAAGCAGGGGGTCATAAGTTCAAGG +
Preference number: 1 (lower is better)
Translates to: SPDVLEPDLIVQAGQ*QLLKRLKQGVISSR
Trigger: CCTTGAACTTATGACCCCCTGCTTCAGCCTCTTGAGTAGCTGGCATTGACCAGCCTGTACTATCAGGTCTGGCTCTAAGACGTCAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR GCA 90 bp TGGGGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTaGAGGTTCTCACTTGCCCTGTGGTCATTGCCTGGTTCTAGAGAT +
Preference number: 1 (lower is better)
Translates to: WGMKSLHVLPSLLQP*RFSLALWSLPGSRD
Trigger: ATCTCTAGAACCAGGCAATGACCACAGGGCAAGTGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR CCA 90 bp AACTGTTCCAATAGGTGGCAGCAGATTGTTCCGACCCAAGGTCATTaGAGAGGGAGAAGACAGTGTGTCTGCTGTCACTGGAAGGAGCTT +
Preference number: 1 (lower is better)
Translates to: NCSNRWQQIVPTQGH*RGRRQCVCCHWKEL
Trigger: AAGCTCCTTCCAGTGACAGCAGACACACTGTCTTCTCCCTCTCCAATGACCTTGGGTCGGAACAATCTGCTGCCACCTATTGGAACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR CCA 90 bp ATAAAGGCCTTCCAGACTACTCAACACTTGAAGGTGCTTGGAGGGTaGTATGGATACACCCTTTCTGTCTCCCTTACTGTCCTTTGCACC +
Preference number: 1 (lower is better)
Translates to: IKAFQTTQHLKVLGG*YGYTLSVSLTVLCT
Trigger: GGTGCAAAGGACAGTAAGGGAGACAGAAAGGGTGTATCCATACCACCCTCCAAGCACCTTCAAGTGTTGAGTAGTCTGGAAGGCCTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR CCA 90 bp GCACAGTGGTACACATACCCAGGGCAGCATGAGCTTCAGAGAGGATaGCCTAAATTATTTGAGGGCTCTGTAATGAGACAGATCCACTTC +
Preference number: 1 (lower is better)
Translates to: AQWYTYPGQHELQRG*PKLFEGSVMRQIHF
Trigger: GAAGTGGATCTGTCTCATTACAGAGCCCTCAAATAATTTAGGCCATCCTCTCTGAAGCTCATGCTGCCCTGGGTATGTGTACCACTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR CCA 90 bp TCACCACTCCTAGCTTTGGGAAGTGTTGGGTTCTATGTAGTTAAGTaGGTTGAAACTCCCGATTCCCCTCCTTTGCCTCTTATGCTGGGA +
Preference number: 1 (lower is better)
Translates to: SPLLALGSVGFYVVK*VETPDSPPLPLMLG
Trigger: TCCCAGCATAAGAGGCAAAGGAGGGGAATCGGGAGTTTCAACCCACTTAACTACATAGAACCCAACACTTCCCAAAGCTAGGAGTGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR TCA 90 bp CTCCCACCTTTTGCCAGGGTCTCACTACATAGTCCAGGTTGGTCTTaGACTCAGCATCCTTCTACTTCAGCCTTTGAGTATTGGCAATAC +
Preference number: 1 (lower is better)
Translates to: LPPFARVSLHSPGWS*TQHPSTSAFEYWQY
Trigger: GTATTGCCAATACTCAAAGGCTGAAGTAGAAGGATGCTGAGTTCAAGACCAACCTGGACTATGTAGTGAGACCCTGGCAAAAGGTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR GCA 90 bp TTACAGTTCACAGGTTTATTACCATCATGGTGGGAAACATGGCAGTaGGCAGGCAAGCATAGTGCTGAAGAAGGAGCTGAGAGTTCTCCA +
Preference number: 1 (lower is better)
Translates to: LQFTGLLPSWWETWQ*AGKHSAEEGAESSP
Trigger: TGGAGAACTCTCAGCTCCTTCTTCAGCACTATGCTTGCCTGCGCACTGCCATGTTTCCCACCATGATGGTAATAAACCTGTGAACTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR GCA 90 bp TGTGAGTGTGTGAGTGTGTGTTATGGCAGTTTCCCTAGCACTCAGTaGCATTTAGAAACCCTCATCACGCCAAGCCCCTTCTTTTTCCAT +
Preference number: 1 (lower is better)
Translates to: CECVSVCYGSFPSTQ*HLETLITPSPFFFH
Trigger: ATGGAAAAAGAAGGGGCTTGGCGTGATGAGGGTTTCTAAATGGCACTGAGTGCTAGGGAAACTGCCATAACACACACTCACACACTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR CCA 90 bp AACCCAAATAAAGGCCTTCCAGACTACTCAACACTTGAAGGTGCTTaGAGGGTGGTATGGATACACCCTTTCTGTCTCCCTTACTGTCCT +
Preference number: 1 (lower is better)
Translates to: NPNKGLPDYSTLEGA*RVVWIHPFCLPYCP
Trigger: AGGACAGTAAGGGAGACAGAAAGGGTGTATCCATACCACCCTCCAAGCACCTTCAAGTGTTGAGTAGTCTGGAAGGCCTTTATTTGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR TCA 90 bp GACAGGCTTTACTCACTCACTTGCTTACAACAGCCAATAAAGCCATaGAACACGGGCGTGCGCTCATACAGTGGACAATGGATAACAATG +
Preference number: 1 (lower is better)
Translates to: DRLYSLTCLQQPIKP*NTGVRSYSGQWITM
Trigger: CATTGTTATCCATTGTCCACTGTATGAGCGCACGCCCGTGTTTCATGGCTTTATTGGCTGTTGTAAGCAAGTGAGTGAGTAAAGCCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR TCA 90 bp CACAGATGTGTCGGAGGAGAAAGTACAAACTCTGATGACCACAGATaGGGCCTCATTACTCCTCTACCCACGCTCAAATATTTACTAAGT +
Preference number: 1 (lower is better)
Translates to: HRCVGGESTNSDDHR*GLITPLPTLKYLLS
Trigger: ACTTAGTAAATATTTGAGCGTGGGTAGAGGAGTAATGAGGCCTCATCTGTGGTCATCAGAGTTTGTACTTTCTCCTCCGACACATCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR TCA 90 bp TCATCAAACTTCTTGACACTAGCAATAAGGAGAAAATATTGCAAGTaGCCAAAGGCTGAGTGTGGTGATGTGTGCCCTCCAACCCAAGTC +
Preference number: 1 (lower is better)
Translates to: SSNFLTLAIRRKYCK*PKAECGDVCPPTQV
Trigger: GACTTGGGTTGGAGGGCACACATCACCACACTCAGCCTTTGGTCACTTGCAATATTTTCTCCTTATTGCTAGTGTCAAGAAGTTTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR CCA 90 bp TTAAGTGGGTTGAAACTCCCGATTCCCCTCCTTTGCCTCTTATGCTaGGATCATATGCATATACCATCACGCCTGGCTTATTCTTACATA +
Preference number: 1 (lower is better)
Translates to: LSGLKLPIPLLCLLC*DHMHIPSRLAYSYI
Trigger: TATGTAAGAATAAGCCAGGCGTGATGGTATATGCATATGATCCCAGCATAAGAGGCAAAGGAGGGGAATCGGGAGTTTCAACCCACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR TCA 90 bp AAAAACCTATTTGCTAGACGTTTGCTCCTGGACAAGATGCAACAGTaGCAGGCTTTACTCACTCACTTGCTTACAACAGCCAATAAAGCC +
Preference number: 1 (lower is better)
Translates to: KNLFARRLLLDKMQQ*QALLTHLLTTANKA
Trigger: GGCTTTATTGGCTGTTGTAAGCAAGTGAGTGAGTAAAGCCTGTCACTGTTGCATCTTGTCCAGGAGCAAACGTCTAGCAAATAGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR GCA 90 bp ATGGTTTCAAAAACCTATTTGCTAGACGTTTGCTCCTGGACAAGATaGAACAGTGACAGGCTTTACTCACTCACTTGCTTACAACAGCCA +
Preference number: 1 (lower is better)
Translates to: MVSKTYLLDVCSWTR*NSDRLYSLTCLQQP
Trigger: TGGCTGTTGTAAGCAAGTGAGTGAGTAAAGCCTGTCACTGTTGCATCTTGTCCAGGAGCAAACGTCTAGCAAATAGGTTTTTGAAACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR TCA 90 bp ATACTACATAGAACAGAACTTCCCAAACTTTCCACTTCATGTACGTaGGGTGTCACGTGTGTTAACTACTCTTCACTCAGACAGTCTGAG +
Preference number: 1 (lower is better)
Translates to: ILHRTELPKLSTSCT*GVTCVNYSSLRQSE
Trigger: CTCAGACTGTCTGAGTGAAGAGTAGTTAACACACGTGACACCTCACGTACATGAAGTGGAAAGTTTGGGAAGTTCTGTTCTATGTAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR CCA 90 bp TCCTCTGGAACTGGAGTTACAAATGATTGTGAACCACTTACCATGTaGGCACTAAGATCTCAACTCTTTGCAAGAACAGCAAATACTCTT +
Preference number: 1 (lower is better)
Translates to: SSGTGVTNDCEPLTM*ALRSQLFARTANTL
Trigger: AAGAGTATTTGCTGTTCTTGCAAAGAGTTGAGATCTTAGTGCCCACATGGTAAGTGGTTCACAATCATTTGTAACTCCAGTTCCAGAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR CCA 90 bp CAATGCAATAGTATCTTCCTATGTTCTGAAAATATGGATGGTGGTTaGGAGAGTTTGAAGAGTTTCAGGTTAGTGACAAGGGAGAGAGTT +
Preference number: 1 (lower is better)
Translates to: QCNSIFLCSENMDGG*ESLKSFRLVTRERV
Trigger: AACTCTCTCCCTTGTCACTAACCTGAAACTCTTCAAACTCTCCCAACCACCATCCATATTTTCAGAACATAGGAAGATACTATTGCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR CCA 90 bp TGTAATAAAACACCCAGCATTATTCTATTGTTTCAAATTATGAGATaGAGGCATGGAAGTATAAAGATCCTACAGGTCAACTCTGAGCTC +
Preference number: 1 (lower is better)
Translates to: CNKTPSIILLFQIMR*RHGSIKILQVNSEL
Trigger: GAGCTCAGAGTTGACCTGTAGGATCTTTATACTTCCATGCCTCCATCTCATAATTTGAAACAATAGAATAATGCTGGGTGTTTTATTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR-3UTR TCA 90 bp GGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCACCCAGAATCCTGAGGTaGGGGAAGCTGGCCGCCCAC +
Preference number: 2 (lower is better)
Translates to: GMKSLHVLPSLLQPCRFSPRILR*GKLAAH
Trigger: GTGGGCGGCCAGCTTCCCTCACCTCAGGATTCTGGG...TGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR CAA 90 bp GCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCACTaGCCCTGTGGTCATTGCCTGGTTCTAGAGATGGGTCCACCTCTG +
Preference number: 2 (lower is better)
Translates to: ASMCSQVCCNLAGSH*PCGHCLVLEMGPPL
Trigger: CAGAGGTGGACCCATCTCTAGAACCAGGCAATGACCACAGGGCAAGTGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR-3UTR TCA 90 bp CTTGCAGGTTCTCACTTGCCCTGTGGTCATTGCCTGGTTCTAGAGATGGGTCCAGTAGACCCATGTGACTaGGGACCTGCAGAGCCCCTG +
Preference number: 2 (lower is better)
Translates to: LAGSHLPCGHCLVLEMGPVDPCD*GPAEPL
Trigger: CAGGGGCTCTGCAGGTCCTCAGTCACATGGGTCTAC...TGGACCCATCTCTAGAACCAGGCAATGACCACAGGGCAAGTGAGAACCTGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR CAA 90 bp TGTGCGCCACTACAAGCTAAGCAGCTGCTTTATCTCCCACTGGGTTaGTCTATGAAGGGGTGGGGAAGTGAGCGTGTGCACATGCCAAGG +
Preference number: 2 (lower is better)
Translates to: CAPLQAKQLLYLPLG*SMKGWGSERVHMPR
Trigger: CCTTGGCATGTGCACACGCTCACTTCCCCACCCCTTCATAGACAAACCCAGTGGGAGATAAAGCAGCTGCTTAGCTTGTAGTGGCGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR-3UTR TCA 90 bp ACTCATTCTGTAGACCAGGCTGGCTTCGATCTTCTGCCTCCCAAGTGGTGGGATCGCAGACGAGACCGATaGATGAGAAGGCACAGCATG +
Preference number: 2 (lower is better)
Translates to: THSVDQAGFDLLPPKWWDRRRDR*MRRHSM
Trigger: CATGCTGTGCCTTCTCATTCATCGGTCTCGTCTGCG...ATCCCACCACTTGGGAGGCAGAAGATCGAAGCCAGCCTGGTCTACAGAATGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR CAA 90 bp CCAAGTCTGCTGCAACCTTGCAGGTTCTCACTTGCCCTGTGGTCATaGCCTGGTTCTAGAGATGGGTCCACCTCTGCTCTGAGGTTTTGT +
Preference number: 2 (lower is better)
Translates to: PSLLQPCRFSLALWS*PGSRDGSTSALRFC
Trigger: ACAAAACCTCAGAGCAGAGGTGGACCCATCTCTAGAACCAGGCAATGACCACAGGGCAAGTGAGAACCTGCAAGGTTGCAGCAGACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR-3UTR TCA 90 bp GGCAGTGCGCAGGCAAGCATAGTGCTGAAGAAGGAGCTGAGAGTTCTCCATCTGAGGGAGAGAGTTAATTaGCAGTGGGAACCAACCGTG +
Preference number: 2 (lower is better)
Translates to: GSAQASIVLKKELRVLHLRERVN*QWEPTV
Trigger: CACGGTTGGTTCCCACTGTCAATTAACTCTCTCCCT...CAGATGGAGAACTCTCAGCTCCTTCTTCAGCACTATGCTTGCCTGCGCACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR-3UTR GCA 90 bp CTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCATCATCCGGTGCCTGAATATGTGCTCCCAAGTCTaGTGCAACCTTGCAGGTTCT +
Preference number: 2 (lower is better)
Translates to: LDGPSCCLQELCIIRCLNMCSQV*CNLAGS
Trigger: AGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACAT...ATTCAGGCACCGGATGATGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR-3UTR TCA 90 bp ATTTTGGAGGGAGGAGGGACAGGGTTTCTCTGTATAGCCCTGACTGTCCTGGAAAATACTCTTAACCACTaGGCCTCCTCTCCAGCCCCA +
Preference number: 2 (lower is better)
Translates to: ILEGGGTGFLCIALTVLENTLNH*ASSPAP
Trigger: TGGGGCTGGAGAGGAGGCTCAGTGGTTAAGAGTATT...TTCCAGGACAGTCAGGGCTATACAGAGAAACCCTGTCCCTCCTCCCTCCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR-3UTR TCA 90 bp AGAAGACCGCAGGTAGTGACAGATTTCAAGTTCCTCTACCTCCCACCTTTTGCCGACGAGACCGATGAATaGGAAGGCACAGCATGCAGG +
Preference number: 2 (lower is better)
Translates to: RRPQVVTDFKFLYLPPFADETDE*EGTACR
Trigger: CCTGCATGCTGTGCCTTCTCATTCATCGGTCTCGTC...GGCAAAAGGTGGGAGGTAGAGGAACTTGAAATCTGTCACTACCTGCGGTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR-3UTR TCA 90 bp GTGATTTGGGGTGGTTTTCCATTGTCAAGTCTTTGGGTACAATCTTTACTGCCCGCCTACCCAGAATCCTaGGGTGAGGGAAGCTGGCCG +
Preference number: 2 (lower is better)
Translates to: VIWGGFPLSSLWVQSLLPAYPES*GEGSWP
Trigger: CGGCCAGCTTCCCTCACCTCAGGATTCTGGGTAGGC...GGGCAGTAAAGATTGTACCCAAAGACTTGACAATGGAAAACCACCCCAAATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR-3UTR CCA 90 bp AAGGAGCTGAGAGTTCTCCATCTGGATTGGCAGACAACAGGAAGAGGCCTGGCTCTTCCTCTGAGCCTCTaGGGGCCATTTTCATCCAAA +
Preference number: 2 (lower is better)
Translates to: KELRVLHLDWQTTGRGLALPLSL*GPFSSK
Trigger: TTTGGATGAAAATGGCCCCCAGAGGCTCAGAGGAAG...AGCCAGGCCTCTTCCTGTTGTCTGCCAATCCAGATGGAGAACTCTCAGCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR CAA 90 bp GCGCTCAGGTGTTCTACTTCAACTGTTCCAATAGGTGGCAGCAGATaGTTCCGACCCAAGGTCATTGGAGAGGGAGAAGACAGTGTGTCT +
Preference number: 2 (lower is better)
Translates to: ALRCSTSTVPIGGSR*FRPKVIGEGEDSVS
Trigger: AGACACACTGTCTTCTCCCTCTCCAATGACCTTGGGTCGGAACAATCTGCTGCCACCTATTGGAACAGTTGAAGTAGAACACCTGAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR-3UTR TCA 90 bp AGAAGACCGCAGGTAGTGACAGATTTCAAGTTCCTCTACCTCCCACCTTTTGCCCCTACAGGTCAACTCTaGGCTCACACCAGTGACGTA +
Preference number: 2 (lower is better)
Translates to: RRPQVVTDFKFLYLPPFAPTGQL*AHTSDV
Trigger: TACGTCACTGGTGTGAGCTCAGAGTTGACCTGTAGG...GGCAAAAGGTGGGAGGTAGAGGAACTTGAAATCTGTCACTACCTGCGGTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR-3UTR TCA 90 bp TGTTCCGACCCAAGGTCATTGGAGAGGGAGAAGACAGTGTGTCTGCTGTCACTGGAAACTCATCGGACTTaGGGTGATAGACGGCACTTT +
Preference number: 2 (lower is better)
Translates to: CSDPRSLEREKTVCLLSLETHRT*GDRRHF
Trigger: AAAGTGCCGTCTATCACCTCAAGTCCGATGAGTTTC...CAGTGACAGCAGACACACTGTCTTCTCCCTCTCCAATGACCTTGGGTCGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR-3UTR GCA 90 bp GCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCACTTGCCCTGTGGTCATTGCCACAGTTAGTTACCAGTaGAGTCTTTGGCAGATACTC +
Preference number: 2 (lower is better)
Translates to: APKSAATLQVLTCPVVIATVSYQ*SLWQIL
Trigger: GAGTATCTGCCAAAGACTGCACTGGTAACTAACTGT...GGCAATGACCACAGGGCAAGTGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR-3UTR GCA 90 bp AGAAGACCGCAGGTAGTGACAGATTTCAAGTTCCTCTACCTCCCACCTTTTGCCGAGTGTGGTGATGTGTaGCCTCCAACCCAAGTCTTG +
Preference number: 2 (lower is better)
Translates to: RRPQVVTDFKFLYLPPFAECGDV*PPTQVL
Trigger: CAAGACTTGGGTTGGAGGGCACACATCACCACACTC...GGCAAAAGGTGGGAGGTAGAGGAACTTGAAATCTGTCACTACCTGCGGTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR CAA 90 bp CACACGAGGTACGAGGTGGGATGGCTAAGCTGTGGGACTGAACCCTaGGATCTAAAGCTTCTTCTAGACAGTATGAGAACTGAGCAAGAG +
Preference number: 2 (lower is better)
Translates to: HTRYEVGWLSCGTEP*DLKLLLDSMRTEQE
Trigger: CTCTTGCTCAGTTCTCATACTGTCTAGAAGAAGCTTTAGATCCAAGGGTTCAGTCCCACAGCTTAGCCATCCCACCTCGTACCTCGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR-3UTR TCA 90 bp CAACTAATGCCACTTCCTCTGAGCCTCTGGGGGCCATTTTCATCCAAACCACCATCTGATGACCACAGATaGGGCCTCATTACTCCTCTA +
Preference number: 2 (lower is better)
Translates to: QLMPLPLSLWGPFSSKPPSDDHR*GLITPL
Trigger: TAGAGGAGTAATGAGGCCTCATCTGTGGTCATCAGA...TGGTGGTTTGGATGAAAATGGCCCCCAGAGGCTCAGAGGAAGTGGCATTAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR-3UTR TCA 90 bp TGTTCCGACCCAAGGTCATTGGAGAGGGAGAAGACAGTGTGTCTGCTGTCACTGCACATAGGGACTTCCTaGATCCAGTCTGGTAATTTC +
Preference number: 2 (lower is better)
Translates to: CSDPRSLEREKTVCLLSLHIGTS*IQSGNF
Trigger: GAAATTACCAGACTGGATTCAGGAAGTCCCTATGTG...CAGTGACAGCAGACACACTGTCTTCTCCCTCTCCAATGACCTTGGGTCGGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR-3UTR GCA 90 bp GGACACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTATGTGCTCCCAAGTCTaGTGCAACCTTGCAGGTTCT +
Preference number: 2 (lower is better)
Translates to: GHLYQDNLTDQAAVCRSCMCSQV*CNLAGS
Trigger: AGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACAT...ACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR-3UTR GCA 90 bp AAGGAGCTGAGAGTTCTCCATCTGGATTGGCAGACAACAGGAAGAGGCCTGGCTTCCCTTACTGTCCTTTaGACCTCTTGTTTGGCTGTT +
Preference number: 2 (lower is better)
Translates to: KELRVLHLDWQTTGRGLASLTVL*TSCLAV
Trigger: AACAGCCAAACAAGAGGTGCAAAGGACAGTAAGGGA...AGCCAGGCCTCTTCCTGTTGTCTGCCAATCCAGATGGAGAACTCTCAGCTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR-3UTR CCA 90 bp AGACCAGGCTGGCTTCGATCTTCTGCCTCCCAAGTGGTGGGATTAAAGGGGTATCTCCAACCCAAGTCTTaGCAGATATATAGGGACAGA +
Preference number: 2 (lower is better)
Translates to: RPGWLRSSASQVVGLKGYLQPKS*QIYRDR
Trigger: TCTGTCCCTATATATCTGCCAAGACTTGGGTTGGAG...ATACCCCTTTAATCCCACCACTTGGGAGGCAGAAGATCGAAGCCAGCCTGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR CAA 90 bp GGGTTCTATGTAGTTAAGTGGGTTGAAACTCCCGATTCCCCTCCTTaGCCTCTTATGCTGGGATCATATGCATATACCATCACGCCTGGC +
Preference number: 2 (lower is better)
Translates to: GFYVVKWVETPDSPP*PLMLGSYAYTITPG
Trigger: GCCAGGCGTGATGGTATATGCATATGATCCCAGCATAAGAGGCAAAGGAGGGGAATCGGGAGTTTCAACCCACTTAACTACATAGAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR-3UTR TCA 90 bp CCACTTCATGTACGTGAGGTGTCACGTGTGTTAACTACTCTTCACTCAGACAGTGCCCAGATCAGAGCTTaGGGCTTCAAAGTGTCACAC +
Preference number: 2 (lower is better)
Translates to: PLHVREVSRVLTTLHSDSAQIRA*GFKVSH
Trigger: GTGTGACACTTTGAAGCCTCAAGCTCTGATCTGGGC...ACTGTCTGAGTGAAGAGTAGTTAACACACGTGACACCTCACGTACATGAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR-3UTR TCA 90 bp GAGTGCGTAGGCATGCGCAGAGGTCAGAGAGCAACGTTAAGGAGTCAGCTCTTTCAAAAGTATTCGATTTaGGGCTGGAAAGATGGCTCA +
Preference number: 2 (lower is better)
Translates to: ECVGMRRGQRATLRSQLFQKYSI*GWKDGS
Trigger: TGAGCCATCTTTCCAGCCTCAAATCGAATACTTTTG...AAAGAGCTGACTCCTTAACGTTGCTCTCTGACCTCTGCGCATGCCTACGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR-3UTR CCA 90 bp GGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCAAGCAGTGATTTGGGGTaGTTTTCCATTGTCAAGTCT +
Preference number: 2 (lower is better)
Translates to: GMKSLHVLPSLLQPCRFSSSDLG*FSIVKS
Trigger: AGACTTGACAATGGAAAACCACCCCAAATCACTGCT...TGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR-3UTR CCA 90 bp TCCCCTCCTTTGCCTCTTATGCTGGGATCATATGCATATACCATCACGCCTGGCGAGCTTCAGAGAGGATaGCCTAAATTATTTGAGGGC +
Preference number: 2 (lower is better)
Translates to: SPPLPLMLGSYAYTITPGELQRG*PKLFEG
Trigger: GCCCTCAAATAATTTAGGCCATCCTCTCTGAAGCTC...GCCAGGCGTGATGGTATATGCATATGATCCCAGCATAAGAGGCAAAGGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR-3UTR GCA 90 bp GTAAACAGGGAGGCCAGAAGAGGGCGTAAGATCCTCTGGAACTGGAGTTACAAACTAGTCTCTCAGGGTTaGTTTAACAAGATCACAGGC +
Preference number: 2 (lower is better)
Translates to: VNREARRGRKILWNWSYKLVSQG*FNKITG
Trigger: GCCTGTGATCTTGTTAAAGCAACCCTGAGAGACTAG...TTTGTAACTCCAGTTCCAGAGGATCTTACGCCCTCTTCTGGCCTCCCTGTTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR-3UTR GCA 90 bp GGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCAAAGACAGTAACTGCATaGAGAACAGTTAGTTACCAG +
Preference number: 2 (lower is better)
Translates to: GMKSLHVLPSLLQPCRFSKTVTA*RTVSYQ
Trigger: CTGGTAACTAACTGTTCTGCATGCAGTTACTGTCTT...TGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR-3UTR GCA 90 bp ACTCATTCTGTAGACCAGGCTGGCTTCGATCTTCTGCCTCCCAAGTGGTGGGATCTCCTTTGCCTCTTATaGTGGGATCATATGCATATA +
Preference number: 2 (lower is better)
Translates to: THSVDQAGFDLLPPKWWDLLCLL*WDHMHI
Trigger: TATATGCATATGATCCCAGCATAAGAGGCAAAGGAG...ATCCCACCACTTGGGAGGCAGAAGATCGAAGCCAGCCTGGTCTACAGAATGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR-3UTR CCA 90 bp CTTGCAGGTTCTCACTTGCCCTGTGGTCATTGCCTGGTTCTAGAGATGGGTCCATACCAGTGCAGTCTTTaGCAGATACTCTGTAGTATT +
Preference number: 2 (lower is better)
Translates to: LAGSHLPCGHCLVLEMGPYQCSL*QILCSI
Trigger: AATACTACAGAGTATCTGCCAAAGACTGCACTGGTA...TGGACCCATCTCTAGAACCAGGCAATGACCACAGGGCAAGTGAGAACCTGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR-3UTR CCA 90 bp CAACTAATGCCACTTCCTCTGAGCCTCTGGGGGCCATTTTCATCCAAACCACCAACAGGAAAGAAAGAATaGTTTCGCTCTCTCTCCTCT +
Preference number: 2 (lower is better)
Translates to: QLMPLPLSLWGPFSSKPPTGKKE*FRSLSS
Trigger: AGAGGAGAGAGAGCGAAACCATTCTTTCTTTCCTGT...TGGTGGTTTGGATGAAAATGGCCCCCAGAGGCTCAGAGGAAGTGGCATTAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR-3UTR CCA 90 bp TTGGCAGACAACAGGAAGAGGCCTGGCTTTAAGCATTTGAAACTCCAAAGACCAGCTTGGAGGGTGGTATaGATACACCCTTTCTGTCTC +
Preference number: 2 (lower is better)
Translates to: LADNRKRPGFKHLKLQRPAWRVV*IHPFCL
Trigger: GAGACAGAAAGGGTGTATCCATACCACCCTCCAAGC...TGGTCTTTGGAGTTTCAAATGCTTAAAGCCAGGCCTCTTCCTGTTGTCTGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR-3UTR TCA 90 bp CCACTTCATGTACGTGAGGTGTCACGTGTGTTAACTACTCTTCACTCAGACAGTAAAGCATTTAAGCCCTaGCGTCTTAGAGCCAGACCT +
Preference number: 2 (lower is better)
Translates to: PLHVREVSRVLTTLHSDSKAFKP*RLRARP
Trigger: AGGTCTGGCTCTAAGACGTCAGGGCTTAAATGCTTT...ACTGTCTGAGTGAAGAGTAGTTAACACACGTGACACCTCACGTACATGAAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR-3UTR GCA 90 bp AAGTCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAACTTGACGGACCAAGCTaGTGTTTGCAGGAGCTGTGC +
Preference number: 2 (lower is better)
Translates to: KSLGTIFTAPWSRLTKAELDGPS*CLQELC
Trigger: GCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAG...TTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
ENSMUST00000225942.2
3UTR-3UTR GCA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGACTTGACGGACCAAGCTaGTGTTTGCAGGAGCTGTGC +
Preference number: 2 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERLDGPS*CLQELC
Trigger: GCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAG...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
ENSMUST00000225942.2
3UTR-3UTR GCA 90 bp GGCATGCGCAGAGGTCAGAGAGCAACGTTAAGGAGTCAGCTCTTTCTTGCCCCATATTCTGGATTTGGATaGTGTTCATTCAGGAATATC +
Preference number: 2 (lower is better)
Translates to: GMRRGQRATLRSQLFLAPYSGFG*CSFRNI
Trigger: GATATTCCTGAATGAACAGCATCCAAATCCAGAATA...TGGGGCAAGAAAGAGCTGACTCCTTAACGTTGCTCTCTGACCTCTGCGCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR-3UTR GCA 90 bp CATGAGATTGGGGGATTGGACAAAGGTTATCAGGCTTGCACACAAACATTTCTACTGGCTTCGATCTTCTaGCTCCCAAGTGGTGGGATT +
Preference number: 2 (lower is better)
Translates to: HEIGGLDKGYQACTQTFLLASIF*LPSGGI
Trigger: AATCCCACCACTTGGGAGGCAGAAGATCGAAGCCAG...TAGAAATGTTTGTGTGCAAGCCTGATAACCTTTGTCCAATCCCCCAATCTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR-3UTR CCA 90 bp ACTCATTCTGTAGACCAGGCTGGCTTCGATCTTCTGCCTCCCAAGTGGTGGGATTCAATGAAAGCGTCTTaGATGTACAGAAACAGGAAA +
Preference number: 2 (lower is better)
Translates to: THSVDQAGFDLLPPKWWDSMKAS*MYRNRK
Trigger: TTTCCTGTTTCTGTACATCCAAGACGCTTTCATTGA...ATCCCACCACTTGGGAGGCAGAAGATCGAAGCCAGCCTGGTCTACAGAATGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR-3UTR CCA 90 bp TCCACCAAAGTGCTAAGATCTAGGTGTGCGCCACTACAAGCTAAGCAGCTGCTTGTGTCCCTCTATACCTaGTTTAGGGAAATGGTTTCT +
Preference number: 2 (lower is better)
Translates to: STKVLRSRCAPLQAKQLLVSLYT*FREMVS
Trigger: AGAAACCATTTCCCTAAACCAGGTATAGAGGGACAC...AAGCAGCTGCTTAGCTTGTAGTGGCGCACACCTAGATCTTAGCACTTTGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR-3UTR GCA 90 bp AAGTCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAGACCAAGCTGCTGTTTaGAGGAGCTGTGCATCATCC +
Preference number: 2 (lower is better)
Translates to: KSLGTIFTAPWSRLTKAEDQAAV*RSCASS
Trigger: GGATGATGCACAGCTCCTGCAAACAGCAGCTTGGTC...TTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR-3UTR GCA 90 bp GGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCATATGTTAAAACTGAGTaGAGTTCTCCAGGAATCAAT +
Preference number: 2 (lower is better)
Translates to: GMKSLHVLPSLLQPCRFSYVKTE*SSPGIN
Trigger: ATTGATTCCTGGAGAACTGCACTCAGTTTTAACATA...TGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR-3UTR GCA 90 bp GAGGATTGTAAAAACCCAAATAAAGGCCTTCCAGACTACTCAACACTTGAAGGTGTACAGGCTGGTCAATaGCAGCTACTCAAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: EDCKNPNKGLPDYSTLEGVQAGQ*QLLKRL
Trigger: CAGCCTCTTGAGTAGCTGGCATTGACCAGCCTGTAC...ACCTTCAAGTGTTGAGTAGTCTGGAAGGCCTTTATTTGGGTTTTTACAATCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR CAA 90 bp CAACATATAATGACAGAAACAGGGGCTTATAAAGGACATGAACTTTaGGGAGTGATGGATGGTCACTGTACTGACTGTGGTGAGGGCTTC +
Preference number: 2 (lower is better)
Translates to: QHIMTETGAYKGHEL*GVMDGHCTDCGEGF
Trigger: GAAGCCCTCACCACAGTCAGTACAGTGACCATCCATCACTCCCAAAAGTTCATGTCCTTTATAAGCCCCTGTTTCTGTCATTATATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR-3UTR TCA 90 bp GAGGATACTCAGATGCACATGAACTTCGGTACTGTGTGTCTGGCAGAAACGACTCTGAACCCAGTGATCTaGATCATTTGTGTGTATGTA +
Preference number: 2 (lower is better)
Translates to: EDTQMHMNFGTVCLAETTLNPVI*IICVYV
Trigger: TACATACACACAAATGATTCAGATCACTGGGTTCAG...AGTCGTTTCTGCCAGACACACAGTACCGAAGTTCATGTGCATCTGAGTATCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR-3UTR TCA 90 bp CTACCCACGCTCAAATATTTACTAAGTTCTTTGCTAGTCTCTGTGAGAAACACCAGACTACTCAACACTTaGAGGTGCTTGGAGGGTGGT +
Preference number: 2 (lower is better)
Translates to: LPTLKYLLSSLLVSVRNTRLLNT*RCLEGG
Trigger: ACCACCCTCCAAGCACCTTCAAGTGTTGAGTAGTCT...GGTGTTTCTCACAGAGACTAGCAAAGAACTTAGTAAATATTTGAGCGTGGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR-3UTR TCA 90 bp CAGAAATATTCTGAACCCAGTGATCTGAATCATTTGTGTGTATGTAATCTCACTCTGAATGCTGGGGCATaGAAAGCCTCCATGTGCTCC +
Preference number: 2 (lower is better)
Translates to: QKYSEPSDLNHLCVCNLTLNAGA*KASMCS
Trigger: GGAGCACATGGAGGCTTTTCATGCCCCAGCATTCAG...AGTGAGATTACATACACACAAATGATTCAGATCACTGGGTTCAGAATATTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR-3UTR GCA 90 bp CAGAAATATTCTGAACCCAGTGATCTGAATCATTTGTGTGTATGTAATCTCACTCTTGACGGACCAAGCTaGTGTTTGCAGGAGCTGTGC +
Preference number: 2 (lower is better)
Translates to: QKYSEPSDLNHLCVCNLTLDGPS*CLQELC
Trigger: GCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAG...AGTGAGATTACATACACACAAATGATTCAGATCACTGGGTTCAGAATATTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR-3UTR GCA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGACTCGGAGTAATTATCTaGCTACCCAGAATCCTGAGG +
Preference number: 2 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERLGVII*LPRILR
Trigger: CCTCAGGATTCTGGGTAGGCAGATAATTACTCCGAG...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR-3UTR CCA 90 bp ACAGGAAATCCAGCCACTTCCACCCAGAAGAAACAGAAAGAAAACTACATCACAGAACCACTTACCATGTaGGCACTAAGATCTCAACTC +
Preference number: 2 (lower is better)
Translates to: TGNPATSTQKKQKENYITEPLTM*ALRSQL
Trigger: GAGTTGAGATCTTAGTGCCCACATGGTAAGTGGTTC...TGTGATGTAGTTTTCTTTCTGTTTCTTCTGGGTGGAAGTGGCTGGATTTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR CAA 90 bp CTTACTGTCCTTTGCACCTCTTGTTTGGCTGTTCATCCATATTCTTaGTGGTATTCTTTACAAGCCAGCAAGCCTACGTTTCTGAGTTCT +
Preference number: 2 (lower is better)
Translates to: LTVLCTSCLAVHPYS*WYSLQASKPTFLSS
Trigger: AGAACTCAGAAACGTAGGCTTGCTGGCTTGTAAAGAATACCACAAAGAATATGGATGAACAGCCAAACAAGAGGTGCAAAGGACAGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR CAA 90 bp GTATGGATACACCCTTTCTGTCTCCCTTACTGTCCTTTGCACCTCTaGTTTGGCTGTTCATCCATATTCTTTGTGGTATTCTTTACAAGC +
Preference number: 2 (lower is better)
Translates to: VWIHPFCLPYCPLHL*FGCSSIFFVVFFTS
Trigger: GCTTGTAAAGAATACCACAAAGAATATGGATGAACAGCCAAACAAGAGGTGCAAAGGACAGTAAGGGAGACAGAAAGGGTGTATCCATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR-3UTR GCA 90 bp AAAACTGAGTGCAGTTCTCCAGGAATCAATATAAACAGAAATATTCTGAACCCAGACCAAGCTGCTGTTTaGAGGAGCTGTGCATCATCC +
Preference number: 2 (lower is better)
Translates to: KTECSSPGININRNILNPDQAAV*RSCASS
Trigger: GGATGATGCACAGCTCCTGCAAACAGCAGCTTGGTC...TGGGTTCAGAATATTTCTGTTTATATTGATTCCTGGAGAACTGCACTCAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR-3UTR GCA 90 bp ACAGACAACATGAGCAGTGATTTGGGGTGGTTTTCCATTGTCAAGTCTTTGGGTAAGACAGTAACTGCATaGAGAACAGTTAGTTACCAG +
Preference number: 2 (lower is better)
Translates to: TDNMSSDLGWFSIVKSLGKTVTA*RTVSYQ
Trigger: CTGGTAACTAACTGTTCTGCATGCAGTTACTGTCTT...ACCCAAAGACTTGACAATGGAAAACCACCCCAAATCACTGCTCATGTTGTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR-3UTR CCA 90 bp GGATTAAAGGGGTATGTCACCACTCCTAGCTTTGGGAAGTGTTGGGTTCTATGTGGTAGCATTCTATTCTaGATTTGGATGCTGTTCATT +
Preference number: 2 (lower is better)
Translates to: GLKGYVTTPSFGKCWVLCGSILF*IWMLFI
Trigger: AATGAACAGCATCCAAATCCAGAATAGAATGCTACC...ACATAGAACCCAACACTTCCCAAAGCTAGGAGTGGTGACATACCCCTTTAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR-3UTR GCA 90 bp CAGAAATATTCTGAACCCAGTGATCTGAATCATTTGTGTGTATGTAATCTCACTATGTGCTCCCAAGTCTaGTGCAACCTTGCAGGTTCT +
Preference number: 2 (lower is better)
Translates to: QKYSEPSDLNHLCVCNLTMCSQV*CNLAGS
Trigger: AGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACAT...AGTGAGATTACATACACACAAATGATTCAGATCACTGGGTTCAGAATATTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR-3UTR GCA 90 bp AAAACTGAGTGCAGTTCTCCAGGAATCAATATAAACAGAAATATTCTGAACCCATGTTTGCAGGAGCTGTaGATCATCCGGTGCCTGAAT +
Preference number: 2 (lower is better)
Translates to: KTECSSPGININRNILNPCLQEL*IIRCLN
Trigger: ATTCAGGCACCGGATGATGCACAGCTCCTGCAAACA...TGGGTTCAGAATATTTCTGTTTATATTGATTCCTGGAGAACTGCACTCAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR-3UTR GCA 90 bp AAGTCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAACAGTTAGTTACCAGTaGAGTCTTTGGCAGATACTC +
Preference number: 2 (lower is better)
Translates to: KSLGTIFTAPWSRLTKAETVSYQ*SLWQIL
Trigger: GAGTATCTGCCAAAGACTGCACTGGTAACTAACTGT...TTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
ENSMUST00000225942.2
3UTR-3UTR GCA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGAACAGTTAGTTACCAGTaGAGTCTTTGGCAGATACTC +
Preference number: 2 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERTVSYQ*SLWQIL
Trigger: GAGTATCTGCCAAAGACTGCACTGGTAACTAACTGT...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
ENSMUST00000225942.2
3UTR-3UTR TCA 90 bp CATGAGATTGGGGGATTGGACAAAGGTTATCAGGCTTGCACACAAACATTTCTAGACCAGGTCATTAAATaGAGAGTATTAGTTCTGTTC +
Preference number: 2 (lower is better)
Translates to: HEIGGLDKGYQACTQTFLDQVIK*RVLVLF
Trigger: GAACAGAACTAATACTCTTCATTTAATGACCTGGTC...TAGAAATGTTTGTGTGCAAGCCTGATAACCTTTGTCCAATCCCCCAATCTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR-3UTR CCA 90 bp AAGTCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAATACCAGTGCAGTCTTTaGCAGATACTCTGTAGTATT +
Preference number: 2 (lower is better)
Translates to: KSLGTIFTAPWSRLTKAEYQCSL*QILCSI
Trigger: AATACTACAGAGTATCTGCCAAAGACTGCACTGGTA...TTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
ENSMUST00000225942.2
3UTR-3UTR GCA 90 bp CAGAAATATTCTGAACCCAGTGATCTGAATCATTTGTGTGTATGTAATCTCACTAAGACAGTAACTGCATaGAGAACAGTTAGTTACCAG +
Preference number: 2 (lower is better)
Translates to: QKYSEPSDLNHLCVCNLTKTVTA*RTVSYQ
Trigger: CTGGTAACTAACTGTTCTGCATGCAGTTACTGTCTT...AGTGAGATTACATACACACAAATGATTCAGATCACTGGGTTCAGAATATTTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR-3UTR GCA 90 bp AAAACTGAGTGCAGTTCTCCAGGAATCAATATAAACAGAAATATTCTGAACCCATATGTTAAAACTGAGTaGAGTTCTCCAGGAATCAAT +
Preference number: 2 (lower is better)
Translates to: KTECSSPGININRNILNPYVKTE*SSPGIN
Trigger: ATTGATTCCTGGAGAACTGCACTCAGTTTTAACATA...TGGGTTCAGAATATTTCTGTTTATATTGATTCCTGGAGAACTGCACTCAGTTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR GCA 72 bp GGTGGGGAAGTGAGCGTGTGCACATGCCAAGGCGAGTaGGTAGGCATGCGCAGAGGTCAGAGAGCAACGTTA +
Preference number: 3 (lower is better)
Translates to: GGEVSVCTCQGE*VGMRRGQRATL
Trigger: TAACGTTGCTCTCTGACCTCTGCGCATGCCTACGCACTCGCCTTGGCATGTGCACACGCTCACTTCCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR GCA 72 bp CCTCTCTTGGGGCTGCTGGTTAGGCTCGTCTACCACTaGACTTCGGGCTCGGCTGGAGTCACCATGGGATTT +
Preference number: 3 (lower is better)
Translates to: PLLGLLVRLVYH*TSGSAGVTMGF
Trigger: AAATCCCATGGTGACTCCAGCCGAGCCCGAAGTGCAGTGGTAGACGAGCCTAACCAGCAGCCCCAAGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR CCA 72 bp TCCTCTCCAGCCCCAGGTGAGGTGTGTGTGTGTGTATaGTGCGTGCGTGCATGTGTGTGTGAGTGTGTGAGT +
Preference number: 3 (lower is better)
Translates to: SSPAPGEVCVCV*CVRACVCECVS
Trigger: ACTCACACACTCACACACACATGCACGCACGCACCATACACACACACACACCTCACCTGGGGCTGGAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR CCA 72 bp TCGGCTGGAGTCACCATGGGATTTTGTTGGCCGCTGTaGCCCCATGGCGCTCAGGTGTTCTACTTCAACTGT +
Preference number: 3 (lower is better)
Translates to: SAGVTMGFCWPL*PHGAQVFYFNC
Trigger: ACAGTTGAAGTAGAACACCTGAGCGCCATGGGGCCACAGCGGCCAACAAAATCCCATGGTGACTCCAGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR-3UTR CAA 90 bp GGCATGCGCAGAGGTCAGAGAGCAACGTTAAGGAGTCAGCTCTTTCTTGCCCCACCCGATTCCCCTCCTTaGCCTCTTATGCTGGGATCA +
Preference number: 3 (lower is better)
Translates to: GMRRGQRATLRSQLFLAPPDSPP*PLMLGS
Trigger: TGATCCCAGCATAAGAGGCAAAGGAGGGGAATCGGG...TGGGGCAAGAAAGAGCTGACTCCTTAACGTTGCTCTCTGACCTCTGCGCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR CCA 72 bp CTGCTTTATCTCCCACTGGGTTTGTCTATGAAGGGGTaGGGAAGTGAGCGTGTGCACATGCCAAGGCGAGTG +
Preference number: 3 (lower is better)
Translates to: LLYLPLGLSMKG*GSERVHMPRRV
Trigger: CACTCGCCTTGGCATGTGCACACGCTCACTTCCCCACCCCTTCATAGACAAACCCAGTGGGAGATAAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR TCA 72 bp GCCAGGTCGGGCCTGATGAGGATACTCAGATGCACATaGACTTCGGTACTGTGTGTCTGGCAGAAACGACTG +
Preference number: 3 (lower is better)
Translates to: ARSGLMRILRCT*TSVLCVWQKRL
Trigger: CAGTCGTTTCTGCCAGACACACAGTACCGAAGTTCATGTGCATCTGAGTATCCTCATCAGGCCCGACCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR GCA 72 bp ACCCAAGGTCATTGGAGAGGGAGAAGACAGTGTGTCTaGTGTCACTGGAAGGAGCTTGTCCATCAGGGAGAG +
Preference number: 3 (lower is better)
Translates to: TQGHWRGRRQCV*CHWKELVHQGE
Trigger: CTCTCCCTGATGGACAAGCTCCTTCCAGTGACAGCAGACACACTGTCTTCTCCCTCTCCAATGACCTTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR GCA 72 bp AAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTaGAGGTTCTCACTTGCCCTGTGGTCATTGCCTGGT +
Preference number: 3 (lower is better)
Translates to: KSLHVLPSLLQP*RFSLALWSLPG
Trigger: ACCAGGCAATGACCACAGGGCAAGTGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR TCA 72 bp CTAAGCAGCTGCTTTATCTCCCACTGGGTTTGTCTATaGAGGGGTGGGGAAGTGAGCGTGTGCACATGCCAA +
Preference number: 3 (lower is better)
Translates to: LSSCFISHWVCL*RGGEVSVCTCQ
Trigger: TTGGCATGTGCACACGCTCACTTCCCCACCCCTTCATAGACAAACCCAGTGGGAGATAAAGCAGCTGCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR CCA 72 bp AATAGGTGGCAGCAGATTGTTCCGACCCAAGGTCATTaGAGAGGGAGAAGACAGTGTGTCTGCTGTCACTGG +
Preference number: 3 (lower is better)
Translates to: NRWQQIVPTQGH*RGRRQCVCCHW
Trigger: CCAGTGACAGCAGACACACTGTCTTCTCCCTCTCCAATGACCTTGGGTCGGAACAATCTGCTGCCACCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR GCA 72 bp GGGTTGAAACTCCCGATTCCCCTCCTTTGCCTCTTATaGTGGGATCATATGCATATACCATCACGCCTGGCT +
Preference number: 3 (lower is better)
Translates to: GLKLPIPLLCLL*WDHMHIPSRLA
Trigger: AGCCAGGCGTGATGGTATATGCATATGATCCCAGCATAAGAGGCAAAGGAGGGGAATCGGGAGTTTCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR GCA 72 bp ACAGGTTTATTACCATCATGGTGGGAAACATGGCAGTaGGCAGGCAAGCATAGTGCTGAAGAAGGAGCTGAG +
Preference number: 3 (lower is better)
Translates to: TGLLPSWWETWQ*AGKHSAEEGAE
Trigger: CTCAGCTCCTTCTTCAGCACTATGCTTGCCTGCGCACTGCCATGTTTCCCACCATGATGGTAATAAACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR-3UTR CAA 90 bp GTACGTGAGGTGTCACGTGTGTTAACTACTCTTCACTCAGACAGTCTGAGAAGCAGCCCAGATCAGAGCTaGAGGCTTCAAAGTGTCACA +
Preference number: 3 (lower is better)
Translates to: VREVSRVLTTLHSDSLRSSPDQS*RLQSVT
Trigger: TGTGACACTTTGAAGCCTCAAGCTCTGATCTGGGCT...GCTTCTCAGACTGTCTGAGTGAAGAGTAGTTAACACACGTGACACCTCACGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR-3UTR CAA 90 bp TTGGAAGTCAAGAGGGGCTTCTGGAGTGTCGGTAGCATTCTATTCTGGATTTGGTCTACCTCCCACCTTTaGCCAGGGTCTCACTACATA +
Preference number: 3 (lower is better)
Translates to: LEVKRGFWSVGSILFWIWSTSHL*PGSHYI
Trigger: TATGTAGTGAGACCCTGGCAAAAGGTGGGAGGTAGA...CCAAATCCAGAATAGAATGCTACCGACACTCCAGAAGCCCCTCTTGACTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR-3UTR CAA 90 bp GAGTGCGTAGGCATGCGCAGAGGTCAGAGAGCAACGTTAAGGAGTCAGCTCTTTATGCAGTATTTGGTATaGAACTCAGAACCTAGCACG +
Preference number: 3 (lower is better)
Translates to: ECVGMRRGQRATLRSQLFMQYLV*NSEPST
Trigger: CGTGCTAGGTTCTGAGTTCAATACCAAATACTGCAT...AAAGAGCTGACTCCTTAACGTTGCTCTCTGACCTCTGCGCATGCCTACGCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR TCA 72 bp CTCTCTAAGCACTGCTCTAGTAAAGCATTTAAGCCCTaGCGTCTTAGAGCCAGACCTGATAGTACAGGCTGG +
Preference number: 3 (lower is better)
Translates to: LSKHCSSKAFKP*RLRARPDSTGW
Trigger: CCAGCCTGTACTATCAGGTCTGGCTCTAAGACGTCAGGGCTTAAATGCTTTACTAGAGCAGTGCTTAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR TCA 72 bp TACTCACTCACTTGCTTACAACAGCCAATAAAGCCATaGAACACGGGCGTGCGCTCATACAGTGGACAATGG +
Preference number: 3 (lower is better)
Translates to: YSLTCLQQPIKP*NTGVRSYSGQW
Trigger: CCATTGTCCACTGTATGAGCGCACGCCCGTGTTTCATGGCTTTATTGGCTGTTGTAAGCAAGTGAGTGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR TCA 72 bp AGGTTATCAGGCTTGCACACAAACATTTCTACCTGCTaGGCCCTCTCACTGGCCCTGACCAGGTCATTAAAT +
Preference number: 3 (lower is better)
Translates to: RLSGLHTNISTC*ALSLALTRSLN
Trigger: ATTTAATGACCTGGTCAGGGCCAGTGAGAGGGCTCAGCAGGTAGAAATGTTTGTGTGCAAGCCTGATAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR TCA 72 bp GCAACGTTAAGGAGTCAGCTCTTTCTTGCCCCATCATaGGATTGGGGGATTGGACAAAGGTTATCAGGCTTG +
Preference number: 3 (lower is better)
Translates to: ATLRSQLFLAPS*DWGIGQRLSGL
Trigger: CAAGCCTGATAACCTTTGTCCAATCCCCCAATCTCATGATGGGGCAAGAAAGAGCTGACTCCTTAACGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR-3UTR CAA 90 bp GGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCAGATGAATATATCAGATaGTTGGCAGCACTTTCTCCT +
Preference number: 3 (lower is better)
Translates to: GMKSLHVLPSLLQPCRFSDEYIR*LAALSP
Trigger: AGGAGAAAGTGCTGCCAACAATCTGATATATTCATC...TGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR-3UTR CAA 90 bp AAGGAGCTGAGAGTTCTCCATCTGGATTGGCAGACAACAGGAAGAGGCCTGGCTAAATATGGATGGTGGTaGGGAGAGTTTGAAGAGTTT +
Preference number: 3 (lower is better)
Translates to: KELRVLHLDWQTTGRGLAKYGWW*GEFEEF
Trigger: AAACTCTTCAAACTCTCCCAACCACCATCCATATTT...AGCCAGGCCTCTTCCTGTTGTCTGCCAATCCAGATGGAGAACTCTCAGCTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR-3UTR CAA 90 bp AAGTCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAGGACCAAGCTGCTGTTaGCAGGAGCTGTGCATCATC +
Preference number: 3 (lower is better)
Translates to: KSLGTIFTAPWSRLTKAEGPSCC*QELCII
Trigger: GATGATGCACAGCTCCTGCAAACAGCAGCTTGGTCC...TTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR TCA 72 bp TTTGCTAGACGTTTGCTCCTGGACAAGATGCAACAGTaGCAGGCTTTACTCACTCACTTGCTTACAACAGCC +
Preference number: 3 (lower is better)
Translates to: FARRLLLDKMQQ*QALLTHLLTTA
Trigger: GGCTGTTGTAAGCAAGTGAGTGAGTAAAGCCTGTCACTGTTGCATCTTGTCCAGGAGCAAACGTCTAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR CCA 72 bp TACACATACCCAGGGCAGCATGAGCTTCAGAGAGGATaGCCTAAATTATTTGAGGGCTCTGTAATGAGACAG +
Preference number: 3 (lower is better)
Translates to: YTYPGQHELQRG*PKLFEGSVMRQ
Trigger: CTGTCTCATTACAGAGCCCTCAAATAATTTAGGCCATCCTCTCTGAAGCTCATGCTGCCCTGGGTATGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR CCA 72 bp TTGAAACTCCCGATTCCCCTCCTTTGCCTCTTATGCTaGGATCATATGCATATACCATCACGCCTGGCTTAT +
Preference number: 3 (lower is better)
Translates to: LKLPIPLLCLLC*DHMHIPSRLAY
Trigger: ATAAGCCAGGCGTGATGGTATATGCATATGATCCCAGCATAAGAGGCAAAGGAGGGGAATCGGGAGTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR CCA 72 bp CTAGCTTTGGGAAGTGTTGGGTTCTATGTAGTTAAGTaGGTTGAAACTCCCGATTCCCCTCCTTTGCCTCTT +
Preference number: 3 (lower is better)
Translates to: LALGSVGFYVVK*VETPDSPPLPL
Trigger: AAGAGGCAAAGGAGGGGAATCGGGAGTTTCAACCCACTTAACTACATAGAACCCAACACTTCCCAAAGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR TCA 72 bp AAGAGTTTCAGGTTAGTGACAAGGGAGAGAGTTAATTaGCAGTGGGAACCAACCGTGTGTTCAGGTTTGGAG +
Preference number: 3 (lower is better)
Translates to: KSFRLVTRERVN*QWEPTVCSGLE
Trigger: CTCCAAACCTGAACACACGGTTGGTTCCCACTGTCAATTAACTCTCTCCCTTGTCACTAACCTGAAACTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR TCA 72 bp TTCGCAGAGATTCTCCTGTCTCTGTCTCCCAAGTACTaGGAAGTAAAGGTGTGTCCCTCTATACCTGGTTTA +
Preference number: 3 (lower is better)
Translates to: FAEILLSLSPKY*EVKVCPSIPGL
Trigger: TAAACCAGGTATAGAGGGACACACCTTTACTTCTCAGTACTTGGGAGACAGAGACAGGAGAATCTCTGCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR-3UTR CAA 90 bp GAGGATTGTAAAAACCCAAATAAAGGCCTTCCAGACTACTCAACACTTGAAGGTCTCCCTTACTGTCCTTaGCACCTCTTGTTTGGCTGT +
Preference number: 3 (lower is better)
Translates to: EDCKNPNKGLPDYSTLEGLPYCP*HLLFGC
Trigger: ACAGCCAAACAAGAGGTGCAAAGGACAGTAAGGGAG...ACCTTCAAGTGTTGAGTAGTCTGGAAGGCCTTTATTTGGGTTTTTACAATCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR TCA 72 bp CTTGGATCTAAAGCTTCTTCTAGACAGTATGAGAACTaGGCAAGAGGGCACTCAGATGGTGTATCAGAGTCT +
Preference number: 3 (lower is better)
Translates to: LGSKASSRQYEN*ARGHSDGVSES
Trigger: AGACTCTGATACACCATCTGAGTGCCCTCTTGCTCAGTTCTCATACTGTCTAGAAGAAGCTTTAGATCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR TCA 72 bp TTCTTGACACTAGCAATAAGGAGAAAATATTGCAAGTaGCCAAAGGCTGAGTGTGGTGATGTGTGCCCTCCA +
Preference number: 3 (lower is better)
Translates to: FLTLAIRRKYCK*PKAECGDVCPP
Trigger: TGGAGGGCACACATCACCACACTCAGCCTTTGGTCACTTGCAATATTTTCTCCTTATTGCTAGTGTCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR CCA 72 bp GGGGATACCCCTATACACTTAGTGTTAGAAGTGTTGTaGTGTGTGTGTGTGTGTGTGTGTGTGTTTATGTGT +
Preference number: 3 (lower is better)
Translates to: GDTPIHLVLEVL*CVCVCVCVFMC
Trigger: ACACATAAACACACACACACACACACACACACACCACAACACTTCTAACACTAAGTGTATAGGGGTATCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR-3UTR CAA 90 bp CAGAAATATTCTGAACCCAGTGATCTGAATCATTTGTGTGTATGTAATCTCACTGGACCAAGCTGCTGTTaGCAGGAGCTGTGCATCATC +
Preference number: 3 (lower is better)
Translates to: QKYSEPSDLNHLCVCNLTGPSCC*QELCII
Trigger: GATGATGCACAGCTCCTGCAAACAGCAGCTTGGTCC...AGTGAGATTACATACACACAAATGATTCAGATCACTGGGTTCAGAATATTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR TCA 72 bp AGAACAGAACTTCCCAAACTTTCCACTTCATGTACGTaGGGTGTCACGTGTGTTAACTACTCTTCACTCAGA +
Preference number: 3 (lower is better)
Translates to: RTELPKLSTSCT*GVTCVNYSSLR
Trigger: TCTGAGTGAAGAGTAGTTAACACACGTGACACCTCACGTACATGAAGTGGAAAGTTTGGGAAGTTCTGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR TCA 72 bp TTGGTCTTGAACTCAGCATCCTTCTACTTCAGCCTTTaGGTATTGGCAATACAGGCGTGTAATAAAACACCC +
Preference number: 3 (lower is better)
Translates to: LVLNSASFYFSL*VLAIQACNKTP
Trigger: GGGTGTTTTATTACACGCCTGTATTGCCAATACTCAAAGGCTGAAGTAGAAGGATGCTGAGTTCAAGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR CCA 72 bp ACTGCATGCAGAACAGTTAGTTACCAGTGCAGTCTTTaGCAGATACTCTGTAGTATTTCTCGGACACTTGTA +
Preference number: 3 (lower is better)
Translates to: TACRTVSYQCSL*QILCSISRTLV
Trigger: TACAAGTGTCCGAGAAATACTACAGAGTATCTGCCAAAGACTGCACTGGTAACTAACTGTTCTGCATGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
ENSMUST00000225942.2
3UTR CCA 72 bp TGCACCTCTTGTTTGGCTGTTCATCCATATTCTTTGTaGTATTCTTTACAAGCCAGCAAGCCTACGTTTCTG +
Preference number: 3 (lower is better)
Translates to: CTSCLAVHPYSL*YSLQASKPTFL
Trigger: CAGAAACGTAGGCTTGCTGGCTTGTAAAGAATACCACAAAGAATATGGATGAACAGCCAAACAAGAGGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR CCA 72 bp AATAAAGCCATGAAACACGGGCGTGCGCTCATACAGTaGACAATGGATAACAATGCAACAAATCCTGGAAAT +
Preference number: 3 (lower is better)
Translates to: NKAMKHGRALIQ*TMDNNATNPGN
Trigger: ATTTCCAGGATTTGTTGCATTGTTATCCATTGTCCACTGTATGAGCGCACGCCCGTGTTTCATGGCTTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR CCA 72 bp AAGAGGGGCTTCTGGAGTGTCGGTAGCATTCTATTCTaGATTTGGATGCTGTTCATTCAGGAATATCTACTT +
Preference number: 3 (lower is better)
Translates to: KRGFWSVGSILF*IWMLFIQEYLL
Trigger: AAGTAGATATTCCTGAATGAACAGCATCCAAATCCAGAATAGAATGCTACCGACACTCCAGAAGCCCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR-3UTR CAA 90 bp GAGGATTGTAAAAACCCAAATAAAGGCCTTCCAGACTACTCAACACTTGAAGGTTGTGGGACTGAACCCTaGGATCTAAAGCTTCTTCTA +
Preference number: 3 (lower is better)
Translates to: EDCKNPNKGLPDYSTLEGCGTEP*DLKLLL
Trigger: TAGAAGAAGCTTTAGATCCAAGGGTTCAGTCCCACA...ACCTTCAAGTGTTGAGTAGTCTGGAAGGCCTTTATTTGGGTTTTTACAATCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR-3UTR CAA 90 bp GAGGGCGTAAGATCCTCTGGAACTGGAGTTACAAATGATTGTGAACCACTTACCTTTATGTCTGTGCTTTaGTCTGCTCTGAATGTCTTA +
Preference number: 3 (lower is better)
Translates to: EGVRSSGTGVTNDCEPLTFMSVL*SALNVL
Trigger: TAAGACATTCAGAGCAGACAAAAGCACAGACATAAA...GGTAAGTGGTTCACAATCATTTGTAACTCCAGTTCCAGAGGATCTTACGCCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR-3UTR CAA 90 bp ACAGGGGCTTATAAAGGACATGAACTTTTGGGAGTGATGGATGGTCACTGTACTGTTCATCCATATTCTTaGTGGTATTCTTTACAAGCC +
Preference number: 3 (lower is better)
Translates to: TGAYKGHELLGVMDGHCTVHPYS*WYSLQA
Trigger: GGCTTGTAAAGAATACCACAAAGAATATGGATGAAC...AGTACAGTGACCATCCATCACTCCCAAAAGTTCATGTCCTTTATAAGCCCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR CCA 72 bp TTTCTGTCTCCCTTACTGTCCTTTGCACCTCTTGTTTaGCTGTTCATCCATATTCTTTGTGGTATTCTTTAC +
Preference number: 3 (lower is better)
Translates to: FLSPLLSFAPLV*LFIHILCGILY
Trigger: GTAAAGAATACCACAAAGAATATGGATGAACAGCCAAACAAGAGGTGCAAAGGACAGTAAGGGAGACAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR CCA 72 bp AGTATCTTCCTATGTTCTGAAAATATGGATGGTGGTTaGGAGAGTTTGAAGAGTTTCAGGTTAGTGACAAGG +
Preference number: 3 (lower is better)
Translates to: SIFLCSENMDGG*ESLKSFRLVTR
Trigger: CCTTGTCACTAACCTGAAACTCTTCAAACTCTCCCAACCACCATCCATATTTTCAGAACATAGGAAGATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR-3UTR CAA 90 bp CAGAAATATTCTGAACCCAGTGATCTGAATCATTTGTGTGTATGTAATCTCACTTGGGGTGGTTTTCCATaGTCAAGTCTTTGGGTACAA +
Preference number: 3 (lower is better)
Translates to: QKYSEPSDLNHLCVCNLTWGGFP*SSLWVQ
Trigger: TTGTACCCAAAGACTTGACAATGGAAAACCACCCCA...AGTGAGATTACATACACACAAATGATTCAGATCACTGGGTTCAGAATATTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR-3UTR CAA 90 bp AAAACTGAGTGCAGTTCTCCAGGAATCAATATAAACAGAAATATTCTGAACCCATGGGGTGGTTTTCCATaGTCAAGTCTTTGGGTACAA +
Preference number: 3 (lower is better)
Translates to: KTECSSPGININRNILNPWGGFP*SSLWVQ
Trigger: TTGTACCCAAAGACTTGACAATGGAAAACCACCCCA...TGGGTTCAGAATATTTCTGTTTATATTGATTCCTGGAGAACTGCACTCAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR-3UTR CAA 90 bp AAAACTGAGTGCAGTTCTCCAGGAATCAATATAAACAGAAATATTCTGAACCCAAACATGAGCAGTGATTaGGGGTGGTTTTCCATTGTC +
Preference number: 3 (lower is better)
Translates to: KTECSSPGININRNILNPNMSSD*GWFSIV
Trigger: GACAATGGAAAACCACCCCAAATCACTGCTCATGTT...TGGGTTCAGAATATTTCTGTTTATATTGATTCCTGGAGAACTGCACTCAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR-3UTR CAA 90 bp AAAACTGAGTGCAGTTCTCCAGGAATCAATATAAACAGAAATATTCTGAACCCATCCATTGTCAAGTCTTaGGGTACAATCTTTACTGCC +
Preference number: 3 (lower is better)
Translates to: KTECSSPGININRNILNPSIVKS*GTIFTA
Trigger: GGCAGTAAAGATTGTACCCAAAGACTTGACAATGGA...TGGGTTCAGAATATTTCTGTTTATATTGATTCCTGGAGAACTGCACTCAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
3UTR CCA 72 bp TGTTGTAATAATGGATGGGTACTCAATTCCTTTTTATaGATGAATAATGTTCTGCTGTGTGGTGTACTAGTC +
Preference number: 3 (lower is better)
Translates to: CCNNGWVLNSFL*MNNVLLCGVLV
Trigger: GACTAGTACACCACACAGCAGAACATTATTCATCCATAAAAAGGAATTGAGTACCCATCCATTATTACAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR CAA 72 bp CTGCACTTCGGGCTCGGCTGGAGTCACCATGGGATTTaGTTGGCCGCTGTGGCCCCATGGCGCTCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: LHFGLGWSHHGI*LAAVAPWRSGV
Trigger: AACACCTGAGCGCCATGGGGCCACAGCGGCCAACAAAATCCCATGGTGACTCCAGCCGAGCCCGAAGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
CDS-3UTR TCA 90 bp GGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCACCCTCTTCCCTGAGGTaGGGGAAGCTGGCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: GMKSLHVLPSLLQPCRFSPSSLR*GKLAAH
Trigger: GTGGGCGGCCAGCTTCCCTCACCTCAGGGAAGAGGG...TGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090503.12
CDS-3UTR TCA 90 bp CTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCATCATCCGGTGCCTGAATCCCAGAATCCTGAGGTaGGGGAAGCTGGCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: LDGPSCCLQELCIIRCLNPRILR*GKLAAH
Trigger: GTGGGCGGCCAGCTTCCCTCACCTCAGGATTCTGGG...ATTCAGGCACCGGATGATGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
CDS-3UTR TCA 90 bp GAATGCTGGGGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCCCCAGAATCCTGAGGTaGGGGAAGCTGGCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: ECWGMKSLHVLPSLLQPCPRILR*GKLAAH
Trigger: GTGGGCGGCCAGCTTCCCTCACCTCAGGATTCTGGG...GCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCCCCAGCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
CDS-3UTR TCA 90 bp GAATGCTGGGGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCGCCTACCCAGAATCCTaGGGTGAGGGAAGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: ECWGMKSLHVLPSLLQPCAYPES*GEGSWP
Trigger: CGGCCAGCTTCCCTCACCTCAGGATTCTGGGTAGGC...GCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCCCCAGCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
CDS-3UTR CCA 90 bp CCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCACTTGCCCTGTGCGGATGAAGGGTACGTaGTGGGGGATTGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PPCAPKSAATLQVLTCPVRMKGT*WGIAPP
Trigger: AGGAGGCGCAATCCCCCACCACGTACCCTTCATCCG...CACAGGGCAAGTGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR TCA 90 bp CAACTAATGCCACTTCCTCTGAGCCTCTGGGGGCCATTTTCATCCAAACCACCACCCAGAATCCTGAGGTaGGGGAAGCTGGCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: QLMPLPLSLWGPFSSKPPPRILR*GKLAAH
Trigger: GTGGGCGGCCAGCTTCCCTCACCTCAGGATTCTGGG...TGGTGGTTTGGATGAAAATGGCCCCCAGAGGCTCAGAGGAAGTGGCATTAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
CDS-3UTR TCA 90 bp AGTACAGGCTGGTCAATGCCAGCTACTCAAGAGGCTGAAGCAGGGGGTCATAAGGCCTACCCAGAATCCTaGGGTGAGGGAAGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: STGWSMPATQEAEAGGHKAYPES*GEGSWP
Trigger: CGGCCAGCTTCCCTCACCTCAGGATTCTGGGTAGGC...CTTATGACCCCCTGCTTCAGCCTCTTGAGTAGCTGGCATTGACCAGCCTGTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
CDS-3UTR TCA 90 bp CTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCATCATCCGGTGCCTGAATTGGTGTTCCAGCGCGTaGGTGGCTTGTGCTGATCGG +
Preference number: 4 (lower is better)
Translates to: LDGPSCCLQELCIIRCLNWCSSA*VACADR
Trigger: CCGATCAGCACAAGCCACTCACGCGCTGGAACACCA...ATTCAGGCACCGGATGATGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CCA 90 bp GGGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCTTTTGTTGGCCGCTGTaGCCCCATGGCGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: GHEKPPCAPKSAATLQVLFCWPL*PHGAQV
Trigger: CACCTGAGCGCCATGGGGCCACAGCGGCCAACAAAA...GAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CCA 90 bp GAATGCTGGGGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCTTTTGTTGGCCGCTGTaGCCCCATGGCGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: ECWGMKSLHVLPSLLQPCFCWPL*PHGAQV
Trigger: CACCTGAGCGCCATGGGGCCACAGCGGCCAACAAAA...GCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCCCCAGCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CCA 90 bp CTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCATCATCCGGTGCCTGAATCGGATGAAGGGTACGTaGTGGGGGATTGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LDGPSCCLQELCIIRCLNRMKGT*WGIAPP
Trigger: AGGAGGCGCAATCCCCCACCACGTACCCTTCATCCG...ATTCAGGCACCGGATGATGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR TCA 90 bp GTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGGCATACACAATAGACCCCTCTTCCCTGAGGTaGGGGAAGCTGGCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: VSQGCFNKITGCVAYTIDPSSLR*GKLAAH
Trigger: GTGGGCGGCCAGCTTCCCTCACCTCAGGGAAGAGGG...GTCTATTGTGTATGCCACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037698.13
CDS-3UTR TCA 90 bp AGAAGACCGCAGGTAGTGACAGATTTCAAGTTCCTCTACCTCCCACCTTTTGCCCCCAGAATCCTGAGGTaGGGGAAGCTGGCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: RRPQVVTDFKFLYLPPFAPRILR*GKLAAH
Trigger: GTGGGCGGCCAGCTTCCCTCACCTCAGGATTCTGGG...GGCAAAAGGTGGGAGGTAGAGGAACTTGAAATCTGTCACTACCTGCGGTCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR TCA 90 bp GGACACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTCCCAGAATCCTGAGGTaGGGGAAGCTGGCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: GHLYQDNLTDQAAVCRSCPRILR*GKLAAH
Trigger: GTGGGCGGCCAGCTTCCCTCACCTCAGGATTCTGGG...ACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000225942.2
CDS-3UTR TCA 90 bp GGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCATGGTGTTCCAGCGCGTaGGTGGCTTGTGCTGATCGG +
Preference number: 4 (lower is better)
Translates to: GMKSLHVLPSLLQPCRFSWCSSA*VACADR
Trigger: CCGATCAGCACAAGCCACTCACGCGCTGGAACACCA...TGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR GCA 90 bp CCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCACTTGCCCTGTGAGAAGACAGTGTGTCTaGTGTCACTGGAACCCGGGG +
Preference number: 4 (lower is better)
Translates to: PPCAPKSAATLQVLTCPVRRQCV*CHWNPG
Trigger: CCCCGGGTTCCAGTGACAGCAGACACACTGTCTTCT...CACAGGGCAAGTGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CCA 90 bp CCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCACTTGCCCTGTGCGCTCTGGAAGGGGGTaGTGGTTAAGAGCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: PPCAPKSAATLQVLTCPVRSGRG*WLRACF
Trigger: AAAGCACGCTCTTAACCACCACCCCCTTCCAGAGCG...CACAGGGCAAGTGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
CDS-3UTR TCA 90 bp GGGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCGTGAGTGGCTTGTGCTaGTCGGATGAAGGGTACGTG +
Preference number: 4 (lower is better)
Translates to: GHEKPPCAPKSAATLQVLVSGLC*SDEGYV
Trigger: CACGTACCCTTCATCCGATCAGCACAAGCCACTCAC...GAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR GCA 90 bp GGACACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTTTCAGCTCCACGCTCTaGGGCACGGCCTTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: GHLYQDNLTDQAAVCRSCFSSTL*GTAFRV
Trigger: CACTCGGAAGGCCGTGCCGCAGAGCGTGGAGCTGAA...ACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
ENSMUST00000225942.2
CDS-3UTR GCA 90 bp CACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCATTCAGCTCCACGCTCTaGGGCACGGCCTTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: HLYQDNLTDQAAVCRSCAFSSTL*GTAFRV
Trigger: CACTCGGAAGGCCGTGCCGCAGAGCGTGGAGCTGAA...TGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
ENSMUST00000225942.2
CDS-3UTR GCA 90 bp ACTCATTCTGTAGACCAGGCTGGCTTCGATCTTCTGCCTCCCAAGTGGTGGGATGGTCCAAGATCAAGCTaGCATCAGGGCTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: THSVDQAGFDLLPPKWWDGPRSS*HQGWAL
Trigger: GAGAGCCCAGCCCTGATGGCAGCTTGATCTTGGACC...ATCCCACCACTTGGGAGGCAGAAGATCGAAGCCAGCCTGGTCTACAGAATGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR GCA 90 bp CTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCATCATCCGGTGCCTGAATAGAAGACAGTGTGTCTaGTGTCACTGGAACCCGGGG +
Preference number: 4 (lower is better)
Translates to: LDGPSCCLQELCIIRCLNRRQCV*CHWNPG
Trigger: CCCCGGGTTCCAGTGACAGCAGACACACTGTCTTCT...ATTCAGGCACCGGATGATGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CCA 90 bp GGGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCCGCTCTGGAAGGGGGTaGTGGTTAAGAGCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: GHEKPPCAPKSAATLQVLRSGRG*WLRACF
Trigger: AAAGCACGCTCTTAACCACCACCCCCTTCCAGAGCG...GAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
CDS-3UTR CCA 90 bp GGCAGTGCGCAGGCAAGCATAGTGCTGAAGAAGGAGCTGAGAGTTCTCCATCTGCGCTCTGGAAGGGGGTaGTGGTTAAGAGCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: GSAQASIVLKKELRVLHLRSGRG*WLRACF
Trigger: AAAGCACGCTCTTAACCACCACCCCCTTCCAGAGCG...CAGATGGAGAACTCTCAGCTCCTTCTTCAGCACTATGCTTGCCTGCGCACTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
CDS-3UTR CCA 90 bp CTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCATCATCCGGTGCCTGAATCGGCTGGAGTCACCATaGGATTTTGTTGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: LDGPSCCLQELCIIRCLNRLESP*DFVGRC
Trigger: ACAGCGGCCAACAAAATCCCATGGTGACTCCAGCCG...ATTCAGGCACCGGATGATGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
3UTR CAA 72 bp CTGCAACCTTGCAGGTTCTCACTTGCCCTGTGGTCATaGCCTGGTTCTAGAGATGGGTCCACCTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LQPCRFSLALWS*PGSRDGSTSAL
Trigger: CAGAGCAGAGGTGGACCCATCTCTAGAACCAGGCAATGACCACAGGGCAAGTGAGAACCTGCAAGGTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
3UTR CAA 72 bp GAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTaGCAGGTTCTCACTTGCCCTGTGGTCATTGCCTGG +
Preference number: 4 (lower is better)
Translates to: EKPPCAPKSAAT*QVLTCPVVIAW
Trigger: CCAGGCAATGACCACAGGGCAAGTGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
CDS-3UTR TCA 90 bp GTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGGCATACACAATAGACGCCTACCCAGAATCCTaGGGTGAGGGAAGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: VSQGCFNKITGCVAYTIDAYPES*GEGSWP
Trigger: CGGCCAGCTTCCCTCACCTCAGGATTCTGGGTAGGC...GTCTATTGTGTATGCCACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR TCA 90 bp GGGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCTGTAGAGGCATCCCATaGATCAAGAGGCCACTCACG +
Preference number: 4 (lower is better)
Translates to: GHEKPPCAPKSAATLQVLCRGIP*IKRPLT
Trigger: CGTGAGTGGCCTCTTGATTCATGGGATGCCTCTACA...GAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR TCA 90 bp CACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCAGTAGACCCATGTGACTaGGGACCTGCAGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: HLYQDNLTDQAAVCRSCAVDPCD*GPAEPL
Trigger: CAGGGGCTCTGCAGGTCCTCAGTCACATGGGTCTAC...TGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR TCA 90 bp CTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCATCATCCGGTGCCTGAATTTTTGTAGACCCATGTaGCTGAGGACCTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LDGPSCCLQELCIIRCLNFCRPM*LRTCRA
Trigger: GGCTCTGCAGGTCCTCAGTCACATGGGTCTACAAAA...ATTCAGGCACCGGATGATGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR GCA 90 bp GTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGGCATACACAATAGACTTCAGCTCCACGCTCTaGGGCACGGCCTTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: VSQGCFNKITGCVAYTIDFSSTL*GTAFRV
Trigger: CACTCGGAAGGCCGTGCCGCAGAGCGTGGAGCTGAA...GTCTATTGTGTATGCCACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR GCA 90 bp TTGGAAGTCAAGAGGGGCTTCTGGAGTGTCGGTAGCATTCTATTCTGGATTTGGTTCAGCTCCACGCTCTaGGGCACGGCCTTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: LEVKRGFWSVGSILFWIWFSSTL*GTAFRV
Trigger: CACTCGGAAGGCCGTGCCGCAGAGCGTGGAGCTGAA...CCAAATCCAGAATAGAATGCTACCGACACTCCAGAAGCCCCTCTTGACTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR GCA 90 bp CCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCACTTGCCCTGTGTGGCTGATGACCGCTTaGTTGACAGAAACTCATCGG +
Preference number: 4 (lower is better)
Translates to: PPCAPKSAATLQVLTCPVWLMTA*LTETHR
Trigger: CCGATGAGTTTCTGTCAAGCAAGCGGTCATCAGCCA...CACAGGGCAAGTGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CCA 90 bp GGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCACGCTCTGGAAGGGGGTaGTGGTTAAGAGCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: GMKSLHVLPSLLQPCRFSRSGRG*WLRACF
Trigger: AAAGCACGCTCTTAACCACCACCCCCTTCCAGAGCG...TGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
CDS-3UTR CCA 90 bp TGTTCCGACCCAAGGTCATTGGAGAGGGAGAAGACAGTGTGTCTGCTGTCACTGCGCTCTGGAAGGGGGTaGTGGTTAAGAGCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: CSDPRSLEREKTVCLLSLRSGRG*WLRACF
Trigger: AAAGCACGCTCTTAACCACCACCCCCTTCCAGAGCG...CAGTGACAGCAGACACACTGTCTTCTCCCTCTCCAATGACCTTGGGTCGGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
CDS-3UTR CCA 90 bp CTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCATCATCCGGTGCCTGAATCCGACCCAAGGTCATTaGAGAGGGAGAAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: LDGPSCCLQELCIIRCLNPTQGH*RGRRQC
Trigger: ACACTGTCTTCTCCCTCTCCAATGACCTTGGGTCGG...ATTCAGGCACCGGATGATGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CCA 90 bp CACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCATTTTGTTGGCCGCTGTaGCCCCATGGCGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: HLYQDNLTDQAAVCRSCAFCWPL*PHGAQV
Trigger: CACCTGAGCGCCATGGGGCCACAGCGGCCAACAAAA...TGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
3UTR CAA 72 bp TGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCACTaGCCCTGTGGTCATTGCCTGGTTCTAGAGATGGGT +
Preference number: 4 (lower is better)
Translates to: CSQVCCNLAGSH*PCGHCLVLEMG
Trigger: ACCCATCTCTAGAACCAGGCAATGACCACAGGGCAAGTGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
CDS-3UTR TCA 90 bp CCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCACTTGCCCTGTGGAAACTCATCGGACTTaGGGTGATAGACGGCACTTT +
Preference number: 4 (lower is better)
Translates to: PPCAPKSAATLQVLTCPVETHRT*GDRRHF
Trigger: AAAGTGCCGTCTATCACCTCAAGTCCGATGAGTTTC...CACAGGGCAAGTGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR GCA 90 bp CTGCTGTGTGGTGTACTAGTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGGTCCAAGATCAAGCTaGCATCAGGGCTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LLCGVLVSQGCFNKITGCGPRSS*HQGWAL
Trigger: GAGAGCCCAGCCCTGATGGCAGCTTGATCTTGGACC...GCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGACTAGTACACCACACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
3UTR CAA 72 bp CTACAAGCTAAGCAGCTGCTTTATCTCCCACTGGGTTaGTCTATGAAGGGGTGGGGAAGTGAGCGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: LQAKQLLYLPLG*SMKGWGSERVH
Trigger: GTGCACACGCTCACTTCCCCACCCCTTCATAGACAAACCCAGTGGGAGATAAAGCAGCTGCTTAGCTTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR TCA 90 bp CTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCATCATCCGGTGCCTGAATTGGGTGATTCTTGGGTaGTGTCAGATTCACTGTGAG +
Preference number: 4 (lower is better)
Translates to: LDGPSCCLQELCIIRCLNWVILG*CQIHCE
Trigger: CTCACAGTGAATCTGACATCACCCAAGAATCACCCA...ATTCAGGCACCGGATGATGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR GCA 90 bp ACAGACAACATGAGCAGTGATTTGGGGTGGTTTTCCATTGTCAAGTCTTTGGGTTTCAGCTCCACGCTCTaGGGCACGGCCTTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: TDNMSSDLGWFSIVKSLGFSSTL*GTAFRV
Trigger: CACTCGGAAGGCCGTGCCGCAGAGCGTGGAGCTGAA...ACCCAAAGACTTGACAATGGAAAACCACCCCAAATCACTGCTCATGTTGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
CDS-3UTR GCA 90 bp GAGTGCGTAGGCATGCGCAGAGGTCAGAGAGCAACGTTAAGGAGTCAGCTCTTTTTGCAGATGGCCACCTaGTTGCTGTGTTCTCATTCG +
Preference number: 4 (lower is better)
Translates to: ECVGMRRGQRATLRSQLFLQMAT*LLCSHS
Trigger: CGAATGAGAACACAGCAAGCAGGTGGCCATCTGCAA...AAAGAGCTGACTCCTTAACGTTGCTCTCTGACCTCTGCGCATGCCTACGCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR GCA 90 bp CTGTGTGGTGTACTAGTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGGGCTTCTTTCTGGCTTaGAGATGGCCACCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: LCGVLVSQGCFNKITGCVGFFLA*RWPPAC
Trigger: GCAAGCAGGTGGCCATCTGCAAGCCAGAAAGAAGCC...CACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGACTAGTACACCACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR GCA 90 bp GAATGCTGGGGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCCTCGGAGTAATTATCTaGCTACCCAGAATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ECWGMKSLHVLPSLLQPCLGVII*LPRILR
Trigger: CCTCAGGATTCTGGGTAGGCAGATAATTACTCCGAG...GCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCCCCAGCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
CDS-3UTR GCA 90 bp GAATGCTGGGGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCCGCCTCCTGGCAGACTaGGTTGTATATGACAAAGAT +
Preference number: 4 (lower is better)
Translates to: ECWGMKSLHVLPSLLQPCRLLAD*VVYDKD
Trigger: ATCTTTGTCATATACAACGCAGTCTGCCAGGAGGCG...GCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCCCCAGCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CCA 90 bp TGTGGTGTACTAGTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGGCACGCTCTGGAAGGGGGTaGTGGTTAAGAGCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: CGVLVSQGCFNKITGCVARSGRG*WLRACF
Trigger: AAAGCACGCTCTTAACCACCACCCCCTTCCAGAGCG...TGCCACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGACTAGTACACCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR CCA 90 bp AGAAGACCGCAGGTAGTGACAGATTTCAAGTTCCTCTACCTCCCACCTTTTGCCCGCTCTGGAAGGGGGTaGTGGTTAAGAGCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: RRPQVVTDFKFLYLPPFARSGRG*WLRACF
Trigger: AAAGCACGCTCTTAACCACCACCCCCTTCCAGAGCG...GGCAAAAGGTGGGAGGTAGAGGAACTTGAAATCTGTCACTACCTGCGGTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR CCA 90 bp CACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCACGCTCTGGAAGGGGGTaGTGGTTAAGAGCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: HLYQDNLTDQAAVCRSCARSGRG*WLRACF
Trigger: AAAGCACGCTCTTAACCACCACCCCCTTCCAGAGCG...TGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
ENSMUST00000225942.2
CDS-3UTR CCA 90 bp GGGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCCCTGCACTTTCTCAGTaGCATTCTGGTCAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: GHEKPPCAPKSAATLQVLPALSQ*HSGQVH
Trigger: GTGAACTTGACCAGAATGCCACTGAGAAAGTGCAGG...GAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CCA 90 bp GGACACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTAAAAGGAGCCTCTCTTaGGGCTGCTGGTTAGGCTCG +
Preference number: 4 (lower is better)
Translates to: GHLYQDNLTDQAAVCRSCKRSLS*GCWLGS
Trigger: CGAGCCTAACCAGCAGCCCCAAGAGAGGCTCCTTTT...ACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR TCA 90 bp GGACACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTTGTAGAGGCATCCCATaGATCAAGAGGCCACTCACG +
Preference number: 4 (lower is better)
Translates to: GHLYQDNLTDQAAVCRSCCRGIP*IKRPLT
Trigger: CGTGAGTGGCCTCTTGATTCATGGGATGCCTCTACA...ACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR TCA 90 bp GGACACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTTTTTGTAGACCCATGTaGCTGAGGACCTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GHLYQDNLTDQAAVCRSCFCRPM*LRTCRA
Trigger: GGCTCTGCAGGTCCTCAGTCACATGGGTCTACAAAA...ACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR TCA 90 bp GTAAACAGGGAGGCCAGAAGAGGGCGTAAGATCCTCTGGAACTGGAGTTACAAAACAAGCCGGAGGCTTTaGTGGTGGGGGATGGTTTAT +
Preference number: 4 (lower is better)
Translates to: VNREARRGRKILWNWSYKTSRRL*WWGMVY
Trigger: ATAAACCATCCCCCACCATCAAAGCCTCCGGCTTGT...TTTGTAACTCCAGTTCCAGAGGATCTTACGCCCTCTTCTGGCCTCCCTGTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR GCA 90 bp GGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCACGCCTCCTGGCAGACTaGGTTGTATATGACAAAGAT +
Preference number: 4 (lower is better)
Translates to: GMKSLHVLPSLLQPCRFSRLLAD*VVYDKD
Trigger: ATCTTTGTCATATACAACGCAGTCTGCCAGGAGGCG...TGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CCA 90 bp GAATGCTGGGGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCTTCTCAGTGGCATTCTaGTCAAGTTCACCATATCCC +
Preference number: 4 (lower is better)
Translates to: ECWGMKSLHVLPSLLQPCFSVAF*SSSPYP
Trigger: GGGATATGGTGAACTTGACCAGAATGCCACTGAGAA...GCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCCCCAGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CCA 90 bp GTAAACAGGGAGGCCAGAAGAGGGCGTAAGATCCTCTGGAACTGGAGTTACAAAAGCTGCCATCAGGGCTaGGCTCTCTTATGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: VNREARRGRKILWNWSYKSCHQG*ALLWLL
Trigger: AAGAAGCCATAAGAGAGCCCAGCCCTGATGGCAGCT...TTTGTAACTCCAGTTCCAGAGGATCTTACGCCCTCTTCTGGCCTCCCTGTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR CCA 90 bp CACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCACCGACCCAAGGTCATTaGAGAGGGAGAAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: HLYQDNLTDQAAVCRSCAPTQGH*RGRRQC
Trigger: ACACTGTCTTCTCCCTCTCCAATGACCTTGGGTCGG...TGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CCA 90 bp CTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCATCATCCGGTGCCTGAATTTCTCAGTGGCATTCTaGTCAAGTTCCTGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: LDGPSCCLQELCIIRCLNFSVAF*SSSCEN
Trigger: GTTCTCACAGGAACTTGACCAGAATGCCACTGAGAA...ATTCAGGCACCGGATGATGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
CDS-3UTR TCA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGAGCCTACCCAGAATCCTaGGGTGAGGGAAGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERAYPES*GEGSWP
Trigger: CGGCCAGCTTCCCTCACCTCAGGATTCTGGGTAGGC...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000225942.2
CDS-3UTR GCA 90 bp GGACACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTTGGCTGATGACCGCTTaGTTGACAGAAACTCATCGG +
Preference number: 4 (lower is better)
Translates to: GHLYQDNLTDQAAVCRSCWLMTA*LTETHR
Trigger: CCGATGAGTTTCTGTCAAGCAAGCGGTCATCAGCCA...ACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CCA 90 bp CTGTGTGGTGTACTAGTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGTCTGGAAGGGGGTGGTaGTTAAGAGCGTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LCGVLVSQGCFNKITGCVSGRGW*LRACFV
Trigger: AACAAAGCACGCTCTTAACCACCACCCCCTTCCAGA...CACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGACTAGTACACCACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR CCA 90 bp AGAAGACCGCAGGTAGTGACAGATTTCAAGTTCCTCTACCTCCCACCTTTTGCCTCTGGAAGGGGGTGGTaGTTAAGAGCGTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: RRPQVVTDFKFLYLPPFASGRGW*LRACFV
Trigger: AACAAAGCACGCTCTTAACCACCACCCCCTTCCAGA...GGCAAAAGGTGGGAGGTAGAGGAACTTGAAATCTGTCACTACCTGCGGTCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR CCA 90 bp GAGTGCGTAGGCATGCGCAGAGGTCAGAGAGCAACGTTAAGGAGTCAGCTCTTTTTCTCAGTGGCATTCTaGTCAAGTTCACCATATCCC +
Preference number: 4 (lower is better)
Translates to: ECVGMRRGQRATLRSQLFFSVAF*SSSPYP
Trigger: GGGATATGGTGAACTTGACCAGAATGCCACTGAGAA...AAAGAGCTGACTCCTTAACGTTGCTCTCTGACCTCTGCGCATGCCTACGCACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR CCA 90 bp GTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGGCATACACAATAGACAGCTGCCATCAGGGCTaGGCTCTCTTATGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: VSQGCFNKITGCVAYTIDSCHQG*ALLWLL
Trigger: AAGAAGCCATAAGAGAGCCCAGCCCTGATGGCAGCT...GTCTATTGTGTATGCCACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR TCA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGAGTAGACCCATGTGACTaGGGACCTGCAGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERVDPCD*GPAEPL
Trigger: CAGGGGCTCTGCAGGTCCTCAGTCACATGGGTCTAC...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR TCA 90 bp AAGTCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAATGGTGTTCCAGCGCGTaGGTGGCTTGTGCTGATCGG +
Preference number: 4 (lower is better)
Translates to: KSLGTIFTAPWSRLTKAEWCSSA*VACADR
Trigger: CCGATCAGCACAAGCCACTCACGCGCTGGAACACCA...TTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR TCA 90 bp GGATACCCCTATACACTTAGTGTTAGAAGTGTTGTGGTGTGTGTGTGTGTGTGTACAGGGTGCTGGGTTTaGGCAGCAGCACACACATAC +
Preference number: 4 (lower is better)
Translates to: GYPYTLSVRSVVVCVCVCTGCWV*AAAHTY
Trigger: GTATGTGTGTGCTGCTGCTCAAACCCAGCACCCTGT...ACACACACACACACACACCACAACACTTCTAACACTAAGTGTATAGGGGTATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
CDS-3UTR TCA 90 bp TGTTCCGACCCAAGGTCATTGGAGAGGGAGAAGACAGTGTGTCTGCTGTCACTGCTGGTCAAGTTCCTGTaGGAACTTGTATCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: CSDPRSLEREKTVCLLSLLVKFL*ELVSFP
Trigger: TGGAAAAGATACAAGTTCTCACAGGAACTTGACCAG...CAGTGACAGCAGACACACTGTCTTCTCCCTCTCCAATGACCTTGGGTCGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
CDS-3UTR GCA 90 bp GTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGGCATACACAATAGACTTGCAGATGGCCACCTaGTTGCTGTGTTCTCATTCG +
Preference number: 4 (lower is better)
Translates to: VSQGCFNKITGCVAYTIDLQMAT*LLCSHS
Trigger: CGAATGAGAACACAGCAAGCAGGTGGCCATCTGCAA...GTCTATTGTGTATGCCACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR GCA 90 bp GGACACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTCGCCTCCTGGCAGACTaGGTTGTATATGACAAAGAT +
Preference number: 4 (lower is better)
Translates to: GHLYQDNLTDQAAVCRSCRLLAD*VVYDKD
Trigger: ATCTTTGTCATATACAACGCAGTCTGCCAGGAGGCG...ACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CCA 90 bp CAACTAATGCCACTTCCTCTGAGCCTCTGGGGGCCATTTTCATCCAAACCACCATTCTCAGTGGCATTCTaGTCAAGTTCACCATATCCC +
Preference number: 4 (lower is better)
Translates to: QLMPLPLSLWGPFSSKPPFSVAF*SSSPYP
Trigger: GGGATATGGTGAACTTGACCAGAATGCCACTGAGAA...TGGTGGTTTGGATGAAAATGGCCCCCAGAGGCTCAGAGGAAGTGGCATTAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
CDS-3UTR CCA 90 bp TGTGGTGTACTAGTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGGCACCTGCACTTTCTCAGTaGCATTCTGGTCAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: CGVLVSQGCFNKITGCVAPALSQ*HSGQVH
Trigger: GTGAACTTGACCAGAATGCCACTGAGAAAGTGCAGG...TGCCACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGACTAGTACACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR CCA 90 bp GTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGGCATACACAATAGACCTTATGGCTTCTTTCTaGCTTGCAGATGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: VSQGCFNKITGCVAYTIDLMASF*LADGHL
Trigger: CAGGTGGCCATCTGCAAGCCAGAAAGAAGCCATAAG...GTCTATTGTGTATGCCACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR CCA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGATTTTGTTGGCCGCTGTaGCCCCATGGCGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERFCWPL*PHGAQV
Trigger: CACCTGAGCGCCATGGGGCCACAGCGGCCAACAAAA...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CCA 90 bp GTGATTTGGGGTGGTTTTCCATTGTCAAGTCTTTGGGTACAATCTTTACTGCCCCGGCTGGAGTCACCATaGGATTTTGTTGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: VIWGGFPLSSLWVQSLLPRLESP*DFVGRC
Trigger: ACAGCGGCCAACAAAATCCCATGGTGACTCCAGCCG...GGGCAGTAAAGATTGTACCCAAAGACTTGACAATGGAAAACCACCCCAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CCA 90 bp GTGATTTGGGGTGGTTTTCCATTGTCAAGTCTTTGGGTACAATCTTTACTGCCCAAAAGGAGCCTCTCTTaGGGCTGCTGGTTAGGCTCG +
Preference number: 4 (lower is better)
Translates to: VIWGGFPLSSLWVQSLLPKRSLS*GCWLGS
Trigger: CGAGCCTAACCAGCAGCCCCAAGAGAGGCTCCTTTT...GGGCAGTAAAGATTGTACCCAAAGACTTGACAATGGAAAACCACCCCAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CCA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGACGGATGAAGGGTACGTaGTGGGGGATTGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERRMKGT*WGIAPP
Trigger: AGGAGGCGCAATCCCCCACCACGTACCCTTCATCCG...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
3UTR CAA 72 bp TGTTCTACTTCAACTGTTCCAATAGGTGGCAGCAGATaGTTCCGACCCAAGGTCATTGGAGAGGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: CSTSTVPIGGSR*FRPKVIGEGED
Trigger: GTCTTCTCCCTCTCCAATGACCTTGGGTCGGAACAATCTGCTGCCACCTATTGGAACAGTTGAAGTAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
CDS-3UTR TCA 90 bp GTACTAGTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGGCATACACATGGGTGATTCTTGGGTaGTGTCAGATTCACTGTGAG +
Preference number: 4 (lower is better)
Translates to: VLVSQGCFNKITGCVAYTWVILG*CQIHCE
Trigger: CTCACAGTGAATCTGACATCACCCAAGAATCACCCA...TGTGTATGCCACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGACTAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR TCA 90 bp GGACACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTCACATAGGGACTTCCTaGATCCAGTCTGGTAATTTC +
Preference number: 4 (lower is better)
Translates to: GHLYQDNLTDQAAVCRSCHIGTS*IQSGNF
Trigger: GAAATTACCAGACTGGATTCAGGAAGTCCCTATGTG...ACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR TCA 90 bp CACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCACACATAGGGACTTCCTaGATCCAGTCTGGTAATTTC +
Preference number: 4 (lower is better)
Translates to: HLYQDNLTDQAAVCRSCAHIGTS*IQSGNF
Trigger: GAAATTACCAGACTGGATTCAGGAAGTCCCTATGTG...TGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR GCA 90 bp CATGAGATTGGGGGATTGGACAAAGGTTATCAGGCTTGCACACAAACATTTCTAGGCTTCTTTCTGGCTTaGAGATGGCCACCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: HEIGGLDKGYQACTQTFLGFFLA*RWPPAC
Trigger: GCAAGCAGGTGGCCATCTGCAAGCCAGAAAGAAGCC...TAGAAATGTTTGTGTGCAAGCCTGATAACCTTTGTCCAATCCCCCAATCTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR GCA 90 bp GTACTAGTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGGCATACACACTCGGAGTAATTATCTaGCTACCCAGAATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VLVSQGCFNKITGCVAYTLGVII*LPRILR
Trigger: CCTCAGGATTCTGGGTAGGCAGATAATTACTCCGAG...TGTGTATGCCACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGACTAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR CCA 90 bp ACTCATTCTGTAGACCAGGCTGGCTTCGATCTTCTGCCTCCCAAGTGGTGGGATCTTGTATCTTTTCCATaGCTGTTGTTGGTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: THSVDQAGFDLLPPKWWDLVSFP*LLLVEE
Trigger: TTCCTCTACCAACAACAGCCATGGAAAAGATACAAG...ATCCCACCACTTGGGAGGCAGAAGATCGAAGCCAGCCTGGTCTACAGAATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR CCA 90 bp CTGCTGTGTGGTGTACTAGTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCTTCTCAGTGGCATTCTaGTCAAGTTCACCATATCCC +
Preference number: 4 (lower is better)
Translates to: LLCGVLVSQGCFNKITGCFSVAF*SSSPYP
Trigger: GGGATATGGTGAACTTGACCAGAATGCCACTGAGAA...GCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGACTAGTACACCACACAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR CCA 90 bp CACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCATTCTCAGTGGCATTCTaGTCAAGTTCACCATATCCC +
Preference number: 4 (lower is better)
Translates to: HLYQDNLTDQAAVCRSCAFSVAF*SSSPYP
Trigger: GGGATATGGTGAACTTGACCAGAATGCCACTGAGAA...TGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CCA 90 bp GGACACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTTTCTCAGTGGCATTCTaGTCAAGTTCACCATATCCC +
Preference number: 4 (lower is better)
Translates to: GHLYQDNLTDQAAVCRSCFSVAF*SSSPYP
Trigger: GGGATATGGTGAACTTGACCAGAATGCCACTGAGAA...ACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CCA 90 bp CGATTCCCCTCCTTTGCCTCTTATGCTGGGATCATATGCATATACCATCACGCCATTTTCTCACAGTTCTaGGGTCCAAGATCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: RFPSFASYAGIICIYHHAIFSQF*GPRSSC
Trigger: GCAGCTTGATCTTGGACCCCAGAACTGTGAGAAAAT...GGCGTGATGGTATATGCATATGATCCCAGCATAAGAGGCAAAGGAGGGGAATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR CCA 90 bp GTGATTTGGGGTGGTTTTCCATTGTCAAGTCTTTGGGTACAATCTTTACTGCCCCCGACCCAAGGTCATTaGAGAGGGAGAAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: VIWGGFPLSSLWVQSLLPPTQGH*RGRRQC
Trigger: ACACTGTCTTCTCCCTCTCCAATGACCTTGGGTCGG...GGGCAGTAAAGATTGTACCCAAAGACTTGACAATGGAAAACCACCCCAAATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CCA 90 bp CTGTGTGGTGTACTAGTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGTCTTCCATATCCGTGTaGTCAAAAGCTAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: LCGVLVSQGCFNKITGCVSSISV*SKARYS
Trigger: GGAGTACCTAGCTTTTGACCACACGGATATGGAAGA...CACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGACTAGTACACCACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR TCA 90 bp GGATTAAAGGGGTATGTCACCACTCCTAGCTTTGGGAAGTGTTGGGTTCTATGTTGGGTGATTCTTGGGTaGTGTCAGATTCACTGTGAG +
Preference number: 4 (lower is better)
Translates to: GLKGYVTTPSFGKCWVLCWVILG*CQIHCE
Trigger: CTCACAGTGAATCTGACATCACCCAAGAATCACCCA...ACATAGAACCCAACACTTCCCAAAGCTAGGAGTGGTGACATACCCCTTTAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR TCA 90 bp AAGTCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAGTGAGTGGCTTGTGCTaGTCGGATGAAGGGTACGTG +
Preference number: 4 (lower is better)
Translates to: KSLGTIFTAPWSRLTKAEVSGLC*SDEGYV
Trigger: CACGTACCCTTCATCCGATCAGCACAAGCCACTCAC...TTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR TCA 90 bp TATGGATGGTGGTTGGGAGAGTTTGAAGAGTTTCAGGTTAGTGACAAGGGAGAGGCACACACATACAAATaGCTGACTGGGGTCTGTAAG +
Preference number: 4 (lower is better)
Translates to: YGWWLGEFEEFQVSDKGEAHTYK*LTGVCK
Trigger: CTTACAGACCCCAGTCAGTCATTTGTATGTGTGTGC...CTCTCCCTTGTCACTAACCTGAAACTCTTCAAACTCTCCCAACCACCATCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
CDS-3UTR TCA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGACTGAATGCTGGGGCATaGAAAGCCTCCATGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERLNAGA*KASMCS
Trigger: GGAGCACATGGAGGCTTTTCATGCCCCAGCATTCAG...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225942.2
CDS-3UTR GCA 90 bp GTACTAGTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGGCATACACAGAACATCCTCTTTCATaGAGTGAAATGGCGCAATGG +
Preference number: 4 (lower is better)
Translates to: VLVSQGCFNKITGCVAYTEHPLS*SEMAQW
Trigger: CCATTGCGCCATTTCACTGCATGAAAGAGGATGTTC...TGTGTATGCCACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGACTAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR GCA 90 bp ACAGACAACATGAGCAGTGATTTGGGGTGGTTTTCCATTGTCAAGTCTTTGGGTTGGCTGATGACCGCTTaGTTGACAGAAACTCATCGG +
Preference number: 4 (lower is better)
Translates to: TDNMSSDLGWFSIVKSLGWLMTA*LTETHR
Trigger: CCGATGAGTTTCTGTCAAGCAAGCGGTCATCAGCCA...ACCCAAAGACTTGACAATGGAAAACCACCCCAAATCACTGCTCATGTTGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR GCA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGAAGAAGACAGTGTGTCTaGTGTCACTGGAACCCGGGG +
Preference number: 4 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERRRQCV*CHWNPG
Trigger: CCCCGGGTTCCAGTGACAGCAGACACACTGTCTTCT...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CCA 90 bp ACAGACAACATGAGCAGTGATTTGGGGTGGTTTTCCATTGTCAAGTCTTTGGGTTCTGGAAGGGGGTGGTaGTTAAGAGCGTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: TDNMSSDLGWFSIVKSLGSGRGW*LRACFV
Trigger: AACAAAGCACGCTCTTAACCACCACCCCCTTCCAGA...ACCCAAAGACTTGACAATGGAAAACCACCCCAAATCACTGCTCATGTTGTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
CDS-3UTR CCA 90 bp GGATTAAAGGGGTATGTCACCACTCCTAGCTTTGGGAAGTGTTGGGTTCTATGTCCTGCACTTTCTCAGTaGCATTCTGGTCAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: GLKGYVTTPSFGKCWVLCPALSQ*HSGQVH
Trigger: GTGAACTTGACCAGAATGCCACTGAGAAAGTGCAGG...ACATAGAACCCAACACTTCCCAAAGCTAGGAGTGGTGACATACCCCTTTAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR CCA 90 bp CATGAGATTGGGGGATTGGACAAAGGTTATCAGGCTTGCACACAAACATTTCTAGGCTGGGCTCTCTTATaGCTTCTTTCTGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: HEIGGLDKGYQACTQTFLGWALL*LLSGLQ
Trigger: CTGCAAGCCAGAAAGAAGCCATAAGAGAGCCCAGCC...TAGAAATGTTTGTGTGCAAGCCTGATAACCTTTGTCCAATCCCCCAATCTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR CCA 90 bp GTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGGCATACACAATAGACATTTTCTCACAGTTCTaGGGTCCAAGATCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: VSQGCFNKITGCVAYTIDIFSQF*GPRSSC
Trigger: GCAGCTTGATCTTGGACCCCAGAACTGTGAGAAAAT...GTCTATTGTGTATGCCACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR CCA 90 bp AAGTCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAACGGCTGGAGTCACCATaGGATTTTGTTGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: KSLGTIFTAPWSRLTKAERLESP*DFVGRC
Trigger: ACAGCGGCCAACAAAATCCCATGGTGACTCCAGCCG...TTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CCA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGAAAAAGGAGCCTCTCTTaGGGCTGCTGGTTAGGCTCG +
Preference number: 4 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERKRSLS*GCWLGS
Trigger: CGAGCCTAACCAGCAGCCCCAAGAGAGGCTCCTTTT...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
3UTR CAA 72 bp TCTGTAGTATTTCTCGGACACTTGTACCAAGATAACTaGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: SVVFLGHLYQDN*TDQAAVCRSCA
Trigger: TGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTGTCCGAGAAATACTACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
ENSMUST00000225942.2
3UTR CAA 72 bp TACGAGGTGGGATGGCTAAGCTGTGGGACTGAACCCTaGGATCTAAAGCTTCTTCTAGACAGTATGAGAACT +
Preference number: 4 (lower is better)
Translates to: YEVGWLSCGTEP*DLKLLLDSMRT
Trigger: AGTTCTCATACTGTCTAGAAGAAGCTTTAGATCCAAGGGTTCAGTCCCACAGCTTAGCCATCCCACCTCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
CDS-3UTR TCA 90 bp GTGATTTGGGGTGGTTTTCCATTGTCAAGTCTTTGGGTACAATCTTTACTGCCCTGGGTGATTCTTGGGTaGTGTCAGATTCACTGTGAG +
Preference number: 4 (lower is better)
Translates to: VIWGGFPLSSLWVQSLLPWVILG*CQIHCE
Trigger: CTCACAGTGAATCTGACATCACCCAAGAATCACCCA...GGGCAGTAAAGATTGTACCCAAAGACTTGACAATGGAAAACCACCCCAAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR TCA 90 bp ACAGACAACATGAGCAGTGATTTGGGGTGGTTTTCCATTGTCAAGTCTTTGGGTGAAACTCATCGGACTTaGGGTGATAGACGGCACTTT +
Preference number: 4 (lower is better)
Translates to: TDNMSSDLGWFSIVKSLGETHRT*GDRRHF
Trigger: AAAGTGCCGTCTATCACCTCAAGTCCGATGAGTTTC...ACCCAAAGACTTGACAATGGAAAACCACCCCAAATCACTGCTCATGTTGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR TCA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGATGTAGAGGCATCCCATaGATCAAGAGGCCACTCACG +
Preference number: 4 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERCRGIP*IKRPLT
Trigger: CGTGAGTGGCCTCTTGATTCATGGGATGCCTCTACA...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR TCA 90 bp AAAACTGAGTGCAGTTCTCCAGGAATCAATATAAACAGAAATATTCTGAACCCAGTAGACCCATGTGACTaGGGACCTGCAGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: KTECSSPGININRNILNPVDPCD*GPAEPL
Trigger: CAGGGGCTCTGCAGGTCCTCAGTCACATGGGTCTAC...TGGGTTCAGAATATTTCTGTTTATATTGATTCCTGGAGAACTGCACTCAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR TCA 90 bp AAGTCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAATTTTGTAGACCCATGTaGCTGAGGACCTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: KSLGTIFTAPWSRLTKAEFCRPM*LRTCRA
Trigger: GGCTCTGCAGGTCCTCAGTCACATGGGTCTACAAAA...TTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR TCA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGAACAAGCCGGAGGCTTTaGTGGTGGGGGATGGTTTAT +
Preference number: 4 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERTSRRL*WWGMVY
Trigger: ATAAACCATCCCCCACCATCAAAGCCTCCGGCTTGT...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090499.13
ENSMUST00000225942.2
CDS-3UTR GCA 90 bp TATGGATGGTGGTTGGGAGAGTTTGAAGAGTTTCAGGTTAGTGACAAGGGAGAGGAACATCCTCTTTCATaGAGTGAAATGGCGCAATGG +
Preference number: 4 (lower is better)
Translates to: YGWWLGEFEEFQVSDKGEEHPLS*SEMAQW
Trigger: CCATTGCGCCATTTCACTGCATGAAAGAGGATGTTC...CTCTCCCTTGTCACTAACCTGAAACTCTTCAAACTCTCCCAACCACCATCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
CDS-3UTR GCA 90 bp ACAGACAACATGAGCAGTGATTTGGGGTGGTTTTCCATTGTCAAGTCTTTGGGTCTCGGAGTAATTATCTaGCTACCCAGAATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: TDNMSSDLGWFSIVKSLGLGVII*LPRILR
Trigger: CCTCAGGATTCTGGGTAGGCAGATAATTACTCCGAG...ACCCAAAGACTTGACAATGGAAAACCACCCCAAATCACTGCTCATGTTGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
CDS-3UTR GCA 90 bp GGATACCCCTATACACTTAGTGTTAGAAGTGTTGTGGTGTGTGTGTGTGTGTGTCTCGGAGTAATTATCTaGCTACCCAGAATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GYPYTLSVRSVVVCVCVCLGVII*LPRILR
Trigger: CCTCAGGATTCTGGGTAGGCAGATAATTACTCCGAG...ACACACACACACACACACCACAACACTTCTAACACTAAGTGTATAGGGGTATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
CDS-3UTR GCA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGATTGCAGGTTCTCACTTaGCCTGTGGTCATTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERLQVLT*PVVIAW
Trigger: CCAGGCAATGACCACAGGGCAAGTGAGAACCTGCAA...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225942.2
CDS-3UTR CCA 90 bp TGTGGTGTACTAGTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGGCACTTGTATCTTTTCCATaGCTGTTGTTGGTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: CGVLVSQGCFNKITGCVALVSFP*LLLVEE
Trigger: TTCCTCTACCAACAACAGCCATGGAAAAGATACAAG...TGCCACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGACTAGTACACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR CCA 90 bp CACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCACTTGTATCTTTTCCATaGCTGTTGTTGGTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: HLYQDNLTDQAAVCRSCALVSFP*LLLVEE
Trigger: TTCCTCTACCAACAACAGCCATGGAAAAGATACAAG...TGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
ENSMUST00000225942.2
CDS-3UTR CCA 90 bp GGACACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTCTTGTATCTTTTCCATaGCTGTTGTTGGTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: GHLYQDNLTDQAAVCRSCLVSFP*LLLVEE
Trigger: TTCCTCTACCAACAACAGCCATGGAAAAGATACAAG...ACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
ENSMUST00000225942.2
CDS-3UTR CCA 90 bp ACAGGGGCTTATAAAGGACATGAACTTTTGGGAGTGATGGATGGTCACTGTACTCCTGCACTTTCTCAGTaGCATTCTGGTCAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: TGAYKGHELLGVMDGHCTPALSQ*HSGQVH
Trigger: GTGAACTTGACCAGAATGCCACTGAGAAAGTGCAGG...AGTACAGTGACCATCCATCACTCCCAAAAGTTCATGTCCTTTATAAGCCCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR CAA 72 bp GTAGTTAAGTGGGTTGAAACTCCCGATTCCCCTCCTTaGCCTCTTATGCTGGGATCATATGCATATACCATC +
Preference number: 4 (lower is better)
Translates to: VVKWVETPDSPP*PLMLGSYAYTI
Trigger: GATGGTATATGCATATGATCCCAGCATAAGAGGCAAAGGAGGGGAATCGGGAGTTTCAACCCACTTAACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
3UTR CAA 72 bp GTCAGCTCTTTCTTGCCCCATCATGAGATTGGGGGATaGGACAAAGGTTATCAGGCTTGCACACAAACATTT +
Preference number: 4 (lower is better)
Translates to: VSSFLPHHEIGG*DKGYQACTQTF
Trigger: AAATGTTTGTGTGCAAGCCTGATAACCTTTGTCCAATCCCCCAATCTCATGATGGGGCAAGAAAGAGCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR GCA 90 bp ACAGACAACATGAGCAGTGATTTGGGGTGGTTTTCCATTGTCAAGTCTTTGGGTGAACATCCTCTTTCATaGAGTGAAATGGCGCAATGG +
Preference number: 4 (lower is better)
Translates to: TDNMSSDLGWFSIVKSLGEHPLS*SEMAQW
Trigger: CCATTGCGCCATTTCACTGCATGAAAGAGGATGTTC...ACCCAAAGACTTGACAATGGAAAACCACCCCAAATCACTGCTCATGTTGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR GCA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGAATGTGCTCCCAAGTCTaGTGCAACCTTGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERMCSQV*CNLAGS
Trigger: AGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACAT...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225942.2
CDS-3UTR CCA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGATCTGGAAGGGGGTGGTaGTTAAGAGCGTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERSGRGW*LRACFV
Trigger: AACAAAGCACGCTCTTAACCACCACCCCCTTCCAGA...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
ENSMUST00000225942.2
3UTR CAA 72 bp TGTGGGGATACCCCTATACACTTAGTGTTAGAAGTGTaGTGGTGTGTGTGTGTGTGTGTGTGTGTGTTTATG +
Preference number: 4 (lower is better)
Translates to: CGDTPIHLVLEV*WCVCVCVCVFM
Trigger: CATAAACACACACACACACACACACACACACCACAACACTTCTAACACTAAGTGTATAGGGGTATCCCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR CAA 72 bp ATGACAGAAACAGGGGCTTATAAAGGACATGAACTTTaGGGAGTGATGGATGGTCACTGTACTGACTGTGGT +
Preference number: 4 (lower is better)
Translates to: MTETGAYKGHEL*GVMDGHCTDCG
Trigger: ACCACAGTCAGTACAGTGACCATCCATCACTCCCAAAAGTTCATGTCCTTTATAAGCCCCTGTTTCTGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
CDS-3UTR TCA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGATGGGTGATTCTTGGGTaGTGTCAGATTCACTGTGAG +
Preference number: 4 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERWVILG*CQIHCE
Trigger: CTCACAGTGAATCTGACATCACCCAAGAATCACCCA...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR TCA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGAGAAACTCATCGGACTTaGGGTGATAGACGGCACTTT +
Preference number: 4 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERETHRT*GDRRHF
Trigger: AAAGTGCCGTCTATCACCTCAAGTCCGATGAGTTTC...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR GCA 90 bp ACAGGAAATCCAGCCACTTCCACCCAGAAGAAACAGAAAGAAAACTACATCACAGAACATCCTCTTTCATaGAGTGAAATGGCGCAATGG +
Preference number: 4 (lower is better)
Translates to: TGNPATSTQKKQKENYITEHPLS*SEMAQW
Trigger: CCATTGCGCCATTTCACTGCATGAAAGAGGATGTTC...TGTGATGTAGTTTTCTTTCTGTTTCTTCTGGGTGGAAGTGGCTGGATTTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR GCA 90 bp AAGTCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAACTCGGAGTAATTATCTaGCTACCCAGAATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: KSLGTIFTAPWSRLTKAELGVII*LPRILR
Trigger: CCTCAGGATTCTGGGTAGGCAGATAATTACTCCGAG...TTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000225942.2
CDS-3UTR CCA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGACCTGCACTTTCTCAGTaGCATTCTGGTCAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERPALSQ*HSGQVH
Trigger: GTGAACTTGACCAGAATGCCACTGAGAAAGTGCAGG...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CCA 90 bp AAGTCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAACCTGCACTTTCTCAGTaGCATTCTGGTCAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: KSLGTIFTAPWSRLTKAEPALSQ*HSGQVH
Trigger: GTGAACTTGACCAGAATGCCACTGAGAAAGTGCAGG...TTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CCA 90 bp AATTCCTTTTTATGGATGAATAATGTTCTGCTGTGTGGTGTACTAGTCTCTCAGGGCTGGGCTCTCTTATaGCTTCTTTCTGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: NSFLWMNNVLLCGVLVSQGWALL*LLSGLQ
Trigger: CTGCAAGCCAGAAAGAAGCCATAAGAGAGCCCAGCC...CTGAGAGACTAGTACACCACACAGCAGAACATTATTCATCCATAAAAAGGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR CCA 90 bp CAGAAATATTCTGAACCCAGTGATCTGAATCATTTGTGTGTATGTAATCTCACTCGGCTGGAGTCACCATaGGATTTTGTTGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: QKYSEPSDLNHLCVCNLTRLESP*DFVGRC
Trigger: ACAGCGGCCAACAAAATCCCATGGTGACTCCAGCCG...AGTGAGATTACATACACACAAATGATTCAGATCACTGGGTTCAGAATATTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CCA 90 bp AAAACTGAGTGCAGTTCTCCAGGAATCAATATAAACAGAAATATTCTGAACCCAAAAAGGAGCCTCTCTTaGGGCTGCTGGTTAGGCTCG +
Preference number: 4 (lower is better)
Translates to: KTECSSPGININRNILNPKRSLS*GCWLGS
Trigger: CGAGCCTAACCAGCAGCCCCAAGAGAGGCTCCTTTT...TGGGTTCAGAATATTTCTGTTTATATTGATTCCTGGAGAACTGCACTCAGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR TCA 90 bp AAAACTGAGTGCAGTTCTCCAGGAATCAATATAAACAGAAATATTCTGAACCCATGTAGAGGCATCCCATaGATCAAGAGGCCACTCACG +
Preference number: 4 (lower is better)
Translates to: KTECSSPGININRNILNPCRGIP*IKRPLT
Trigger: CGTGAGTGGCCTCTTGATTCATGGGATGCCTCTACA...TGGGTTCAGAATATTTCTGTTTATATTGATTCCTGGAGAACTGCACTCAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR TCA 90 bp AAAACTGAGTGCAGTTCTCCAGGAATCAATATAAACAGAAATATTCTGAACCCAACAAGCCGGAGGCTTTaGTGGTGGGGGATGGTTTAT +
Preference number: 4 (lower is better)
Translates to: KTECSSPGININRNILNPTSRRL*WWGMVY
Trigger: ATAAACCATCCCCCACCATCAAAGCCTCCGGCTTGT...TGGGTTCAGAATATTTCTGTTTATATTGATTCCTGGAGAACTGCACTCAGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090499.13
CDS-3UTR GCA 90 bp AAGTCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAGAACATCCTCTTTCATaGAGTGAAATGGCGCAATGG +
Preference number: 4 (lower is better)
Translates to: KSLGTIFTAPWSRLTKAEEHPLS*SEMAQW
Trigger: CCATTGCGCCATTTCACTGCATGAAAGAGGATGTTC...TTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR GCA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGAGAACATCCTCTTTCATaGAGTGAAATGGCGCAATGG +
Preference number: 4 (lower is better)
Translates to: SLGTIFTAPWSRLTKAEREHPLS*SEMAQW
Trigger: CCATTGCGCCATTTCACTGCATGAAAGAGGATGTTC...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CCA 90 bp ACAGACAACATGAGCAGTGATTTGGGGTGGTTTTCCATTGTCAAGTCTTTGGGTCTTGTATCTTTTCCATaGCTGTTGTTGGTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: TDNMSSDLGWFSIVKSLGLVSFP*LLLVEE
Trigger: TTCCTCTACCAACAACAGCCATGGAAAAGATACAAG...ACCCAAAGACTTGACAATGGAAAACCACCCCAAATCACTGCTCATGTTGTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
CDS-3UTR CCA 90 bp ACAGGGGCTTATAAAGGACATGAACTTTTGGGAGTGATGGATGGTCACTGTACTCTTGTATCTTTTCCATaGCTGTTGTTGGTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: TGAYKGHELLGVMDGHCTLVSFP*LLLVEE
Trigger: TTCCTCTACCAACAACAGCCATGGAAAAGATACAAG...AGTACAGTGACCATCCATCACTCCCAAAAGTTCATGTCCTTTATAAGCCCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
CDS-3UTR CCA 90 bp AATTCCTTTTTATGGATGAATAATGTTCTGCTGTGTGGTGTACTAGTCTCTCAGCTTATGGCTTCTTTCTaGCTTGCAGATGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: NSFLWMNNVLLCGVLVSQLMASF*LADGHL
Trigger: CAGGTGGCCATCTGCAAGCCAGAAAGAAGCCATAAG...CTGAGAGACTAGTACACCACACAGCAGAACATTATTCATCCATAAAAAGGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR CCA 90 bp AAGTCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAATCTTCCATATCCGTGTaGTCAAAAGCTAGGTACTCC +
Preference number: 4 (lower is better)
Translates to: KSLGTIFTAPWSRLTKAESSISV*SKARYS
Trigger: GGAGTACCTAGCTTTTGACCACACGGATATGGAAGA...TTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090499.13
ENSMUST00000225942.2
3UTR CAA 72 bp CTTTGCACCTCTTGTTTGGCTGTTCATCCATATTCTTaGTGGTATTCTTTACAAGCCAGCAAGCCTACGTTT +
Preference number: 4 (lower is better)
Translates to: LCTSCLAVHPYS*WYSLQASKPTF
Trigger: AAACGTAGGCTTGCTGGCTTGTAAAGAATACCACAAAGAATATGGATGAACAGCCAAACAAGAGGTGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
CDS-3UTR CCA 90 bp CAGAAATATTCTGAACCCAGTGATCTGAATCATTTGTGTGTATGTAATCTCACTTCTGGAAGGGGGTGGTaGTTAAGAGCGTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: QKYSEPSDLNHLCVCNLTSGRGW*LRACFV
Trigger: AACAAAGCACGCTCTTAACCACCACCCCCTTCCAGA...AGTGAGATTACATACACACAAATGATTCAGATCACTGGGTTCAGAATATTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
CDS-3UTR CCA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGACTTGTATCTTTTCCATaGCTGTTGTTGGTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERLVSFP*LLLVEE
Trigger: TTCCTCTACCAACAACAGCCATGGAAAAGATACAAG...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
ENSMUST00000225942.2
CDS-3UTR CCA 90 bp AAGTCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAACTTGTATCTTTTCCATaGCTGTTGTTGGTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: KSLGTIFTAPWSRLTKAELVSFP*LLLVEE
Trigger: TTCCTCTACCAACAACAGCCATGGAAAAGATACAAG...TTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
ENSMUST00000225942.2
CDS-3UTR CCA 90 bp CAGAAATATTCTGAACCCAGTGATCTGAATCATTTGTGTGTATGTAATCTCACTCCTGCACTTTCTCAGTaGCATTCTGGTCAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: QKYSEPSDLNHLCVCNLTPALSQ*HSGQVH
Trigger: GTGAACTTGACCAGAATGCCACTGAGAAAGTGCAGG...AGTGAGATTACATACACACAAATGATTCAGATCACTGGGTTCAGAATATTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
3UTR CAA 72 bp CTTTCTGTCTCCCTTACTGTCCTTTGCACCTCTTGTTaGGCTGTTCATCCATATTCTTTGTGGTATTCTTTA +
Preference number: 4 (lower is better)
Translates to: LSVSLTVLCTSC*AVHPYSLWYSL
Trigger: TAAAGAATACCACAAAGAATATGGATGAACAGCCAAACAAGAGGTGCAAAGGACAGTAAGGGAGACAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
CDS-3UTR TCA 90 bp CAGAAATATTCTGAACCCAGTGATCTGAATCATTTGTGTGTATGTAATCTCACTCACATAGGGACTTCCTaGATCCAGTCTGGTAATTTC +
Preference number: 4 (lower is better)
Translates to: QKYSEPSDLNHLCVCNLTHIGTS*IQSGNF
Trigger: GAAATTACCAGACTGGATTCAGGAAGTCCCTATGTG...AGTGAGATTACATACACACAAATGATTCAGATCACTGGGTTCAGAATATTTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CCA 90 bp CAGAAATATTCTGAACCCAGTGATCTGAATCATTTGTGTGTATGTAATCTCACTTTCTCAGTGGCATTCTaGTCAAGTTCACCATATCCC +
Preference number: 4 (lower is better)
Translates to: QKYSEPSDLNHLCVCNLTFSVAF*SSSPYP
Trigger: GGGATATGGTGAACTTGACCAGAATGCCACTGAGAA...AGTGAGATTACATACACACAAATGATTCAGATCACTGGGTTCAGAATATTTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
3UTR CAA 72 bp ACTCCTCTACCCACGCTCAAATATTTACTAAGTTCTTaGCTAGTCTCTGTGAGAAACACCAACTTTAATCAG +
Preference number: 4 (lower is better)
Translates to: TPLPTLKYLLSS*LVSVRNTNFNQ
Trigger: CTGATTAAAGTTGGTGTTTCTCACAGAGACTAGCAAAGAACTTAGTAAATATTTGAGCGTGGGTAGAGGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
3UTR CAA 72 bp AAAGAAATAATAGCTGAAAATGTCAATGAAAGCGTCTaGGATGTACAGAAACAGGAAATCCAGCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: KEIIAENVNESV*DVQKQEIQPLP
Trigger: TGGAAGTGGCTGGATTTCCTGTTTCTGTACATCCAAGACGCTTTCATTGACATTTTCAGCTATTATTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS TCA 90 bp AGGGAGAAGACAGTGTGTCTGCTGTCACTGGAACCCGGGGTCCTCTaGGGATTTCTTCTACAGGCCATGGTGTTCCAGCGCGTGAGTGGC +
Preference number: 5 (lower is better)
Translates to: REKTVCLLSLEPGVL*GFLLQAMVFQRVSG
Trigger: GCCACTCACGCGCTGGAACACCATGGCCTGTAGAAGAAATCCTCAGAGGACCCCGGGTTCCAGTGACAGCAGACACACTGTCTTCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS GCA 90 bp TGCTGGCACTCTTTCTGCAGGCCCTGTGTGTGTGCGCTCAGCTGCTaGTCATACAGGAGCTCGTCGATGGCTGTAAACATGGCCTGCACT +
Preference number: 5 (lower is better)
Translates to: CWHSFCRPCVCALSC*SYRSSSMAVNMACT
Trigger: AGTGCAGGCCATGTTTACAGCCATCGACGAGCTCCTGTATGAGCAGCAGCTGAGCGCACACACACAGGGCCTGCAGAAAGAGTGCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037698.13
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000224721.2
ENSMUST00000224930.2
ENSMUST00000225597.2
ENSMUST00000225942.2
CDS-3UTR CAA 90 bp CCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCACTTGCCCTGTGTCCGACCCAAGGTCATaGGAGAGGGAGAAGACAGTG +
Preference number: 5 (lower is better)
Translates to: PPCAPKSAATLQVLTCPVSDPRS*EREKTV
Trigger: CACTGTCTTCTCCCTCTCCAATGACCTTGGGTCGGA...CACAGGGCAAGTGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CAA 90 bp GGGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCAGTCACCATGGGATTTaGTTGGCCGCTGTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: GHEKPPCAPKSAATLQVLSHHGI*LAAVAP
Trigger: TGGGGCCACAGCGGCCAACAAAATCCCATGGTGACT...GAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CAA 90 bp GAATGCTGGGGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGTCACCATGGGATTTaGTTGGCCGCTGTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: ECWGMKSLHVLPSLLQPCSHHGI*LAAVAP
Trigger: TGGGGCCACAGCGGCCAACAAAATCCCATGGTGACT...GCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCCCCAGCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CAA 90 bp GGGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCCAAAAGGAGCCTCTCTaGGGGCTGCTGGTTAGGCTC +
Preference number: 5 (lower is better)
Translates to: GHEKPPCAPKSAATLQVLQKEPL*GLLVRL
Trigger: GAGCCTAACCAGCAGCCCCAAGAGAGGCTCCTTTTG...GAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CAA 90 bp CTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCATCATCCGGTGCCTGAATCAAAAGGAGCCTCTCTaGGGGCTGCTGGTTAGGCTC +
Preference number: 5 (lower is better)
Translates to: LDGPSCCLQELCIIRCLNQKEPL*GLLVRL
Trigger: GAGCCTAACCAGCAGCCCCAAGAGAGGCTCCTTTTG...ATTCAGGCACCGGATGATGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CAA 90 bp GAATGCTGGGGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGAGGCCACTCACGTTaGGCTGATGACCGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: ECWGMKSLHVLPSLLQPCRGHSR*ADDRLL
Trigger: AAGCAAGCGGTCATCAGCCAAACGTGAGTGGCCTCT...GCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCCCCAGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS GCA 90 bp GGGCTCTCTTATGGCTTCTTTCTGGCTTGCAGATGGCCACCTGCTTaGTGTGTTCTCATTCGGCCTCTTCTCAGAAGCACATCCCTCCCA +
Preference number: 5 (lower is better)
Translates to: GLSYGFFLACRWPPA*CVLIRPLLRSTSLP
Trigger: TGGGAGGGATGTGCTTCTGAGAAGAGGCCGAATGAGAACACAGCAAGCAGGTGGCCATCTGCAAGCCAGAAAGAAGCCATAAGAGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS CCA 90 bp AAGATCAAGCTGCCATCAGGGCTGGGCTCTCTTATGGCTTCTTTCTaGCTTGCAGATGGCCACCTGCTTGCTGTGTTCTCATTCGGCCTC +
Preference number: 5 (lower is better)
Translates to: KIKLPSGLGSLMASF*LADGHLLAVFSFGL
Trigger: GAGGCCGAATGAGAACACAGCAAGCAGGTGGCCATCTGCAAGCCAGAAAGAAGCCATAAGAGAGCCCAGCCCTGATGGCAGCTTGATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS CCA 90 bp AACTGTTCCAATAGGTGGCAGCAGATTGTTCCGACCCAAGGTCATTaGAGAGGGAGAAGACAGTGTGTCTGCTGTCACTGGAACCCGGGG +
Preference number: 5 (lower is better)
Translates to: NCSNRWQQIVPTQGH*RGRRQCVCCHWNPG
Trigger: CCCCGGGTTCCAGTGACAGCAGACACACTGTCTTCTCCCTCTCCAATGACCTTGGGTCGGAACAATCTGCTGCCACCTATTGGAACAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CAA 90 bp GGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCACACAAGCCGGAGGCTTaGATGGTGGGGGATGGTTTA +
Preference number: 5 (lower is better)
Translates to: GMKSLHVLPSLLQPCRFSHKPEA*MVGDGL
Trigger: TAAACCATCCCCCACCATCAAAGCCTCCGGCTTGTG...TGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090499.13
CDS CCA 90 bp ATTTTCTCACAGTTCTGGGGTCCAAGATCAAGCTGCCATCAGGGCTaGGCTCTCTTATGGCTTCTTTCTGGCTTGCAGATGGCCACCTGC +
Preference number: 5 (lower is better)
Translates to: IFSQFWGPRSSCHQG*ALLWLLSGLQMATC
Trigger: GCAGGTGGCCATCTGCAAGCCAGAAAGAAGCCATAAGAGAGCCCAGCCCTGATGGCAGCTTGATCTTGGACCCCAGAACTGTGAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR CAA 90 bp GTACAGGCTGGTCAATGCCAGCTACTCAAGAGGCTGAAGCAGGGGGTCATAAGTCTGTGCCTGCGTAGCTaGGAAAAGCAGAACGCGAAT +
Preference number: 5 (lower is better)
Translates to: VQAGQCQLLKRLKQGVISLCLRS*EKQNAN
Trigger: ATTCGCGTTCTGCTTTTCCAAGCTACGCAGGCACAG...ACTTATGACCCCCTGCTTCAGCCTCTTGAGTAGCTGGCATTGACCAGCCTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
CDS-3UTR CAA 90 bp CTGTGTGGTGTACTAGTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGCAGATGGCCACCTGCTaGCTGTGTTCTCATTCGGCC +
Preference number: 5 (lower is better)
Translates to: LCGVLVSQGCFNKITGCVQMATC*LCSHSA
Trigger: GGCCGAATGAGAACACAGCAAGCAGGTGGCCATCTG...CACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGACTAGTACACCACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR CAA 90 bp TGTGGTGTACTAGTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGGCACAGATGGCCACCTGCTaGCTGTGTTCTCATTCGGCC +
Preference number: 5 (lower is better)
Translates to: CGVLVSQGCFNKITGCVAQMATC*LCSHSA
Trigger: GGCCGAATGAGAACACAGCAAGCAGGTGGCCATCTG...TGCCACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGACTAGTACACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR CAA 90 bp CACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCACAAAAGGAGCCTCTCTaGGGGCTGCTGGTTAGGCTC +
Preference number: 5 (lower is better)
Translates to: HLYQDNLTDQAAVCRSCAQKEPL*GLLVRL
Trigger: GAGCCTAACCAGCAGCCCCAAGAGAGGCTCCTTTTG...TGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS CCA 90 bp TTGTTGGTAGAGGAAATGTCATCCAGTCGCTCTGGAAGGGGGTGGTaGTTAAGAGCGTGCTTTGTTAGTCCTTTCAGCTCCACGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LLVEEMSSSRSGRGW*LRACFVSPFSSTLC
Trigger: GCAGAGCGTGGAGCTGAAAGGACTAACAAAGCACGCTCTTAACCACCACCCCCTTCCAGAGCGACTGGATGACATTTCCTCTACCAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000037698.13
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000224721.2
ENSMUST00000224930.2
ENSMUST00000225597.2
ENSMUST00000225834.2
ENSMUST00000225942.2
ENSMUST00000225991.2
CDS-3UTR CAA 90 bp CACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCAAGAGGCCACTCACGTTaGGCTGATGACCGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: HLYQDNLTDQAAVCRSCARGHSR*ADDRLL
Trigger: AAGCAAGCGGTCATCAGCCAAACGTGAGTGGCCTCT...TGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CAA 90 bp CTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCATCATCCGGTGCCTGAATTCAAGATCTAGGAGCTaGTCCATCAGGGAGAGATTC +
Preference number: 5 (lower is better)
Translates to: LDGPSCCLQELCIIRCLNSRSRS*SIRERF
Trigger: GAATCTCTCCCTGATGGACAAGCTCCTAGATCTTGA...ATTCAGGCACCGGATGATGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CAA 90 bp CTGTGTGGTGTACTAGTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGCACAAGCCGGAGGCTTaGATGGTGGGGGATGGTTTA +
Preference number: 5 (lower is better)
Translates to: LCGVLVSQGCFNKITGCVHKPEA*MVGDGL
Trigger: TAAACCATCCCCCACCATCAAAGCCTCCGGCTTGTG...CACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGACTAGTACACCACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR CAA 90 bp TGTGGTGTACTAGTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGGCACTGTGCCTGCGTAGCTaGGAAAAGCAGAACGCGAAT +
Preference number: 5 (lower is better)
Translates to: CGVLVSQGCFNKITGCVALCLRS*EKQNAN
Trigger: ATTCGCGTTCTGCTTTTCCAAGCTACGCAGGCACAG...TGCCACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGACTAGTACACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR CAA 90 bp CACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCACTGTGCCTGCGTAGCTaGGAAAAGCAGAACGCGAAT +
Preference number: 5 (lower is better)
Translates to: HLYQDNLTDQAAVCRSCALCLRS*EKQNAN
Trigger: ATTCGCGTTCTGCTTTTCCAAGCTACGCAGGCACAG...TGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CAA 90 bp GGACACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTCTGTGCCTGCGTAGCTaGGAAAAGCAGAACGCGAAT +
Preference number: 5 (lower is better)
Translates to: GHLYQDNLTDQAAVCRSCLCLRS*EKQNAN
Trigger: ATTCGCGTTCTGCTTTTCCAAGCTACGCAGGCACAG...ACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CAA 90 bp CTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCATCATCCGGTGCCTGAATTCCTGGCAGACTGCGTaGTATATGACAAAGATGATG +
Preference number: 5 (lower is better)
Translates to: LDGPSCCLQELCIIRCLNSWQTA*YMTKMM
Trigger: CATCATCTTTGTCATATACAACGCAGTCTGCCAGGA...ATTCAGGCACCGGATGATGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CAA 90 bp GGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCATTTCCATGGCTGTTGTaGGTAGAGGAAATGTCATCC +
Preference number: 5 (lower is better)
Translates to: GMKSLHVLPSLLQPCRFSFPWLL*VEEMSS
Trigger: GGATGACATTTCCTCTACCAACAACAGCCATGGAAA...TGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
CDS-3UTR CAA 90 bp GGGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCTCTTTTCCATGGCTGTaGTTGGTAGAGGAAATGTCA +
Preference number: 5 (lower is better)
Translates to: GHEKPPCAPKSAATLQVLSFPWL*LVEEMS
Trigger: TGACATTTCCTCTACCAACAACAGCCATGGAAAAGA...GAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
CDS-3UTR CAA 90 bp CCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGGTTCTCACTTGCCCTGTGATTCACTGTGAGAACTaGTATCTTTTCCATGGCTGT +
Preference number: 5 (lower is better)
Translates to: PPCAPKSAATLQVLTCPVIHCEN*YLFHGC
Trigger: ACAGCCATGGAAAAGATACAAGTTCTCACAGTGAAT...CACAGGGCAAGTGAGAACCTGCAAGGTTGCAGCAGACTTGGGAGCACATGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CAA 90 bp CACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCATTGGCTGATGACCGCTaGCTTGACAGAAACTCATCG +
Preference number: 5 (lower is better)
Translates to: HLYQDNLTDQAAVCRSCALADDR*LDRNSS
Trigger: CGATGAGTTTCTGTCAAGCAAGCGGTCATCAGCCAA...TGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CAA 90 bp CACTTGTACCAAGATAACTTGACGGACCAAGCTGCTGTTTGCAGGAGCTGTGCAATAGGTGGCAGCAGATaGTTCCGACCCAAGGTCATT +
Preference number: 5 (lower is better)
Translates to: HLYQDNLTDQAAVCRSCAIGGSR*FRPKVI
Trigger: AATGACCTTGGGTCGGAACAATCTGCTGCCACCTAT...TGCACAGCTCCTGCAAACAGCAGCTTGGTCCGTCAAGTTATCTTGGTACAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CAA 90 bp ACAGACAACATGAGCAGTGATTTGGGGTGGTTTTCCATTGTCAAGTCTTTGGGTCAAAAGGAGCCTCTCTaGGGGCTGCTGGTTAGGCTC +
Preference number: 5 (lower is better)
Translates to: TDNMSSDLGWFSIVKSLGQKEPL*GLLVRL
Trigger: GAGCCTAACCAGCAGCCCCAAGAGAGGCTCCTTTTG...ACCCAAAGACTTGACAATGGAAAACCACCCCAAATCACTGCTCATGTTGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CAA 90 bp GAATGCTGGGGCATGAAAAGCCTCCATGTGCTCCCAAGTCTGCTGCAACCTTGCAGTTCCTGTGAGAACTaGTATCTTTTCCATGGCTGT +
Preference number: 5 (lower is better)
Translates to: ECWGMKSLHVLPSLLQPCSSCEN*YLFHGC
Trigger: ACAGCCATGGAAAAGATACAAGTTCTCACAGGAACT...GCAAGGTTGCAGCAGACTTGGGAGCACATGGAGGCTTTTCATGCCCCAGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
CDS-3UTR CAA 90 bp GAGGGCGTAAGATCCTCTGGAACTGGAGTTACAAATGATTGTGAACCACTTACCCTGTGCCTGCGTAGCTaGGAAAAGCAGAACGCGAAT +
Preference number: 5 (lower is better)
Translates to: EGVRSSGTGVTNDCEPLTLCLRS*EKQNAN
Trigger: ATTCGCGTTCTGCTTTTCCAAGCTACGCAGGCACAG...GGTAAGTGGTTCACAATCATTTGTAACTCCAGTTCCAGAGGATCTTACGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR CAA 90 bp TGTGGTGTACTAGTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGGCATTTCCATGGCTGTTGTaGGTAGAGGAAATGTCATCC +
Preference number: 5 (lower is better)
Translates to: CGVLVSQGCFNKITGCVAFPWLL*VEEMSS
Trigger: GGATGACATTTCCTCTACCAACAACAGCCATGGAAA...TGCCACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGACTAGTACACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR CAA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGAAGTCACCATGGGATTTaGTTGGCCGCTGTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERSHHGI*LAAVAP
Trigger: TGGGGCCACAGCGGCCAACAAAATCCCATGGTGACT...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CAA 90 bp GTGACAGATTTCAAGTTCCTCTACCTCCCACCTTTTGCCAGGGTCTCACTACATTTTCCATGGCTGTTGTaGGTAGAGGAAATGTCATCC +
Preference number: 5 (lower is better)
Translates to: VTDFKFLYLPPFARVSLHFPWLL*VEEMSS
Trigger: GGATGACATTTCCTCTACCAACAACAGCCATGGAAA...ATGTAGTGAGACCCTGGCAAAAGGTGGGAGGTAGAGGAACTTGAAATCTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR CAA 90 bp AGAAGACCGCAGGTAGTGACAGATTTCAAGTTCCTCTACCTCCCACCTTTTGCCTCTTTTCCATGGCTGTaGTTGGTAGAGGAAATGTCA +
Preference number: 5 (lower is better)
Translates to: RRPQVVTDFKFLYLPPFASFPWL*LVEEMS
Trigger: TGACATTTCCTCTACCAACAACAGCCATGGAAAAGA...GGCAAAAGGTGGGAGGTAGAGGAACTTGAAATCTGTCACTACCTGCGGTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR CAA 90 bp ATTTTGGAGGGAGGAGGGACAGGGTTTCTCTGTATAGCCCTGACTGTCCTGGAAATTCACTGTGAGAACTaGTATCTTTTCCATGGCTGT +
Preference number: 5 (lower is better)
Translates to: ILEGGGTGFLCIALTVLEIHCEN*YLFHGC
Trigger: ACAGCCATGGAAAAGATACAAGTTCTCACAGTGAAT...TTCCAGGACAGTCAGGGCTATACAGAGAAACCCTGTCCCTCCTCCCTCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224721.2
CDS-3UTR CAA 90 bp GTGATTTGGGGTGGTTTTCCATTGTCAAGTCTTTGGGTACAATCTTTACTGCCCTTGGCTGATGACCGCTaGCTTGACAGAAACTCATCG +
Preference number: 5 (lower is better)
Translates to: VIWGGFPLSSLWVQSLLPLADDR*LDRNSS
Trigger: CGATGAGTTTCTGTCAAGCAAGCGGTCATCAGCCAA...GGGCAGTAAAGATTGTACCCAAAGACTTGACAATGGAAAACCACCCCAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CAA 90 bp ACAGACAACATGAGCAGTGATTTGGGGTGGTTTTCCATTGTCAAGTCTTTGGGTTTGGCTGATGACCGCTaGCTTGACAGAAACTCATCG +
Preference number: 5 (lower is better)
Translates to: TDNMSSDLGWFSIVKSLGLADDR*LDRNSS
Trigger: CGATGAGTTTCTGTCAAGCAAGCGGTCATCAGCCAA...ACCCAAAGACTTGACAATGGAAAACCACCCCAAATCACTGCTCATGTTGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CAA 90 bp AAGTCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGAGGCCACTCACGTTaGGCTGATGACCGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: KSLGTIFTAPWSRLTKAERGHSR*ADDRLL
Trigger: AAGCAAGCGGTCATCAGCCAAACGTGAGTGGCCTCT...TTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CAA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGATCCGACCCAAGGTCATaGGAGAGGGAGAAGACAGTG +
Preference number: 5 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERSDPRS*EREKTV
Trigger: CACTGTCTTCTCCCTCTCCAATGACCTTGGGTCGGA...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CAA 90 bp AAGTCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAATCCGACCCAAGGTCATaGGAGAGGGAGAAGACAGTG +
Preference number: 5 (lower is better)
Translates to: KSLGTIFTAPWSRLTKAESDPRS*EREKTV
Trigger: CACTGTCTTCTCCCTCTCCAATGACCTTGGGTCGGA...TTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CAA 90 bp ACAGACAACATGAGCAGTGATTTGGGGTGGTTTTCCATTGTCAAGTCTTTGGGTATAGGTGGCAGCAGATaGTTCCGACCCAAGGTCATT +
Preference number: 5 (lower is better)
Translates to: TDNMSSDLGWFSIVKSLGIGGSR*FRPKVI
Trigger: AATGACCTTGGGTCGGAACAATCTGCTGCCACCTAT...ACCCAAAGACTTGACAATGGAAAACCACCCCAAATCACTGCTCATGTTGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CAA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGACACAAGCCGGAGGCTTaGATGGTGGGGGATGGTTTA +
Preference number: 5 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERHKPEA*MVGDGL
Trigger: TAAACCATCCCCCACCATCAAAGCCTCCGGCTTGTG...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090499.13
ENSMUST00000225942.2
CDS-3UTR CAA 90 bp GTACTAGTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCGTGGCATACACATCTTTTCCATGGCTGTaGTTGGTAGAGGAAATGTCA +
Preference number: 5 (lower is better)
Translates to: VLVSQGCFNKITGCVAYTSFPWL*LVEEMS
Trigger: TGACATTTCCTCTACCAACAACAGCCATGGAAAAGA...TGTGTATGCCACGCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGACTAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR CAA 90 bp TACTCAACACTTGAAGGTGCTTGGAGGGTGGTATGGATACACCCTTTCTGTCTCTCTTTTCCATGGCTGTaGTTGGTAGAGGAAATGTCA +
Preference number: 5 (lower is better)
Translates to: YSTLEGAWRVVWIHPFCLSFPWL*LVEEMS
Trigger: TGACATTTCCTCTACCAACAACAGCCATGGAAAAGA...GAGACAGAAAGGGTGTATCCATACCACCCTCCAAGCACCTTCAAGTGTTGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
CDS-3UTR CAA 90 bp CTGCTGTGTGGTGTACTAGTCTCTCAGGGTTGCTTTAACAAGATCACAGGCTGCATTCACTGTGAGAACTaGTATCTTTTCCATGGCTGT +
Preference number: 5 (lower is better)
Translates to: LLCGVLVSQGCFNKITGCIHCEN*YLFHGC
Trigger: ACAGCCATGGAAAAGATACAAGTTCTCACAGTGAAT...GCAGCCTGTGATCTTGTTAAAGCAACCCTGAGAGACTAGTACACCACACAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS-3UTR CAA 90 bp AAGTCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAACTGTGCCTGCGTAGCTaGGAAAAGCAGAACGCGAAT +
Preference number: 5 (lower is better)
Translates to: KSLGTIFTAPWSRLTKAELCLRS*EKQNAN
Trigger: ATTCGCGTTCTGCTTTTCCAAGCTACGCAGGCACAG...TTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CAA 90 bp ACAGACAACATGAGCAGTGATTTGGGGTGGTTTTCCATTGTCAAGTCTTTGGGTTCTTTTCCATGGCTGTaGTTGGTAGAGGAAATGTCA +
Preference number: 5 (lower is better)
Translates to: TDNMSSDLGWFSIVKSLGSFPWL*LVEEMS
Trigger: TGACATTTCCTCTACCAACAACAGCCATGGAAAAGA...ACCCAAAGACTTGACAATGGAAAACCACCCCAAATCACTGCTCATGTTGTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
CDS-3UTR CAA 90 bp GTGATTTGGGGTGGTTTTCCATTGTCAAGTCTTTGGGTACAATCTTTACTGCCCTCTTTTCCATGGCTGTaGTTGGTAGAGGAAATGTCA +
Preference number: 5 (lower is better)
Translates to: VIWGGFPLSSLWVQSLLPSFPWL*LVEEMS
Trigger: TGACATTTCCTCTACCAACAACAGCCATGGAAAAGA...GGGCAGTAAAGATTGTACCCAAAGACTTGACAATGGAAAACCACCCCAAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
CDS-3UTR CAA 90 bp CCACTTCATGTACGTGAGGTGTCACGTGTGTTAACTACTCTTCACTCAGACAGTATTCACTGTGAGAACTaGTATCTTTTCCATGGCTGT +
Preference number: 5 (lower is better)
Translates to: PLHVREVSRVLTTLHSDSIHCEN*YLFHGC
Trigger: ACAGCCATGGAAAAGATACAAGTTCTCACAGTGAAT...ACTGTCTGAGTGAAGAGTAGTTAACACACGTGACACCTCACGTACATGAAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224930.2
CDS-3UTR CAA 90 bp AAAACTGAGTGCAGTTCTCCAGGAATCAATATAAACAGAAATATTCTGAACCCATCCGACCCAAGGTCATaGGAGAGGGAGAAGACAGTG +
Preference number: 5 (lower is better)
Translates to: KTECSSPGININRNILNPSDPRS*EREKTV
Trigger: CACTGTCTTCTCCCTCTCCAATGACCTTGGGTCGGA...TGGGTTCAGAATATTTCTGTTTATATTGATTCCTGGAGAACTGCACTCAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CAA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGATCAAGATCTAGGAGCTaGTCCATCAGGGAGAGATTC +
Preference number: 5 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERSRSRS*SIRERF
Trigger: GAATCTCTCCCTGATGGACAAGCTCCTAGATCTTGA...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CAA 90 bp ACAGACAACATGAGCAGTGATTTGGGGTGGTTTTCCATTGTCAAGTCTTTGGGTATTCACTGTGAGAACTaGTATCTTTTCCATGGCTGT +
Preference number: 5 (lower is better)
Translates to: TDNMSSDLGWFSIVKSLGIHCEN*YLFHGC
Trigger: ACAGCCATGGAAAAGATACAAGTTCTCACAGTGAAT...ACCCAAAGACTTGACAATGGAAAACCACCCCAAATCACTGCTCATGTTGTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CAA 90 bp AAAACTGAGTGCAGTTCTCCAGGAATCAATATAAACAGAAATATTCTGAACCCAGTCACTGGAAGGAGCTaGTCCATCAGGGAGAGATTC +
Preference number: 5 (lower is better)
Translates to: KTECSSPGININRNILNPVTGRS*SIRERF
Trigger: GAATCTCTCCCTGATGGACAAGCTCCTTCCAGTGAC...TGGGTTCAGAATATTTCTGTTTATATTGATTCCTGGAGAACTGCACTCAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051915.7
CDS-3UTR CAA 90 bp AAGTCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAATCCTGGCAGACTGCGTaGTATATGACAAAGATGATG +
Preference number: 5 (lower is better)
Translates to: KSLGTIFTAPWSRLTKAESWQTA*YMTKMM
Trigger: CATCATCTTTGTCATATACAACGCAGTCTGCCAGGA...TTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CAA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGATCCTGGCAGACTGCGTaGTATATGACAAAGATGATG +
Preference number: 5 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERSWQTA*YMTKMM
Trigger: CATCATCTTTGTCATATACAACGCAGTCTGCCAGGA...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS TCA 90 bp TCAGTTGATGTAATGGGTGATTCTTGGGTGATGTCAGATTCACTGTaGGAACTTGTATCTTTTCCATGGCTGTTGTTGGTAGAGGAAATG +
Preference number: 5 (lower is better)
Translates to: SVDVMGDSWVMSDSL*ELVSFPWLLLVEEM
Trigger: CATTTCCTCTACCAACAACAGCCATGGAAAAGATACAAGTTCTCACAGTGAATCTGACATCACCCAAGAATCACCCATTACATCAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000037698.13
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000224110.2
ENSMUST00000224721.2
ENSMUST00000224930.2
ENSMUST00000225597.2
ENSMUST00000225942.2
ENSMUST00000225991.2
CDS-3UTR CAA 90 bp AAGTCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAATCTTTTCCATGGCTGTaGTTGGTAGAGGAAATGTCA +
Preference number: 5 (lower is better)
Translates to: KSLGTIFTAPWSRLTKAESFPWL*LVEEMS
Trigger: TGACATTTCCTCTACCAACAACAGCCATGGAAAAGA...TTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
ENSMUST00000225942.2
CDS-3UTR CAA 90 bp AAAACTGAGTGCAGTTCTCCAGGAATCAATATAAACAGAAATATTCTGAACCCATTGGCTGATGACCGCTaGCTTGACAGAAACTCATCG +
Preference number: 5 (lower is better)
Translates to: KTECSSPGININRNILNPLADDR*LDRNSS
Trigger: CGATGAGTTTCTGTCAAGCAAGCGGTCATCAGCCAA...TGGGTTCAGAATATTTCTGTTTATATTGATTCCTGGAGAACTGCACTCAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CAA 90 bp CAGAAATATTCTGAACCCAGTGATCTGAATCATTTGTGTGTATGTAATCTCACTATAGGTGGCAGCAGATaGTTCCGACCCAAGGTCATT +
Preference number: 5 (lower is better)
Translates to: QKYSEPSDLNHLCVCNLTIGGSR*FRPKVI
Trigger: AATGACCTTGGGTCGGAACAATCTGCTGCCACCTAT...AGTGAGATTACATACACACAAATGATTCAGATCACTGGGTTCAGAATATTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CAA 90 bp AAAACTGAGTGCAGTTCTCCAGGAATCAATATAAACAGAAATATTCTGAACCCAATAGGTGGCAGCAGATaGTTCCGACCCAAGGTCATT +
Preference number: 5 (lower is better)
Translates to: KTECSSPGININRNILNPIGGSR*FRPKVI
Trigger: AATGACCTTGGGTCGGAACAATCTGCTGCCACCTAT...TGGGTTCAGAATATTTCTGTTTATATTGATTCCTGGAGAACTGCACTCAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CAA 90 bp TCTTTGGGTACAATCTTTACTGCCCCATGGAGTAGGTTAACTAAAGCTGAAAGAATTCACTGTGAGAACTaGTATCTTTTCCATGGCTGT +
Preference number: 5 (lower is better)
Translates to: SLGTIFTAPWSRLTKAERIHCEN*YLFHGC
Trigger: ACAGCCATGGAAAAGATACAAGTTCTCACAGTGAAT...TCTTTCAGCTTTAGTTAACCTACTCCATGGGGCAGTAAAGATTGTACCCAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS-3UTR CAA 90 bp CAGAAATATTCTGAACCCAGTGATCTGAATCATTTGTGTGTATGTAATCTCACTTCAAGATCTAGGAGCTaGTCCATCAGGGAGAGATTC +
Preference number: 5 (lower is better)
Translates to: QKYSEPSDLNHLCVCNLTSRSRS*SIRERF
Trigger: GAATCTCTCCCTGATGGACAAGCTCCTAGATCTTGA...AGTGAGATTACATACACACAAATGATTCAGATCACTGGGTTCAGAATATTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS-3UTR CAA 90 bp CAGAAATATTCTGAACCCAGTGATCTGAATCATTTGTGTGTATGTAATCTCACTTTTCCATGGCTGTTGTaGGTAGAGGAAATGTCATCC +
Preference number: 5 (lower is better)
Translates to: QKYSEPSDLNHLCVCNLTFPWLL*VEEMSS
Trigger: GGATGACATTTCCTCTACCAACAACAGCCATGGAAA...AGTGAGATTACATACACACAAATGATTCAGATCACTGGGTTCAGAATATTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
CDS-3UTR CAA 90 bp AAAACTGAGTGCAGTTCTCCAGGAATCAATATAAACAGAAATATTCTGAACCCATTTCCATGGCTGTTGTaGGTAGAGGAAATGTCATCC +
Preference number: 5 (lower is better)
Translates to: KTECSSPGININRNILNPFPWLL*VEEMSS
Trigger: GGATGACATTTCCTCTACCAACAACAGCCATGGAAA...TGGGTTCAGAATATTTCTGTTTATATTGATTCCTGGAGAACTGCACTCAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225834.2
CDS-3UTR CAA 90 bp AAAACTGAGTGCAGTTCTCCAGGAATCAATATAAACAGAAATATTCTGAACCCAATTCACTGTGAGAACTaGTATCTTTTCCATGGCTGT +
Preference number: 5 (lower is better)
Translates to: KTECSSPGININRNILNPIHCEN*YLFHGC
Trigger: ACAGCCATGGAAAAGATACAAGTTCTCACAGTGAAT...TGGGTTCAGAATATTTCTGTTTATATTGATTCCTGGAGAACTGCACTCAGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
CDS GCA 72 bp CACTCTTTCTGCAGGCCCTGTGTGTGTGCGCTCAGCTaGTGCTCATACAGGAGCTCGTCGATGGCTGTAAAC +
Preference number: 6 (lower is better)
Translates to: HSFCRPCVCALS*CSYRSSSMAVN
Trigger: GTTTACAGCCATCGACGAGCTCCTGTATGAGCAGCAGCTGAGCGCACACACACAGGGCCTGCAGAAAGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037698.13
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000224721.2
ENSMUST00000224930.2
ENSMUST00000225597.2
ENSMUST00000225942.2
CDS GCA 72 bp TCTTTCTGCAGGCCCTGTGTGTGTGCGCTCAGCTGCTaGTCATACAGGAGCTCGTCGATGGCTGTAAACATG +
Preference number: 6 (lower is better)
Translates to: SFCRPCVCALSC*SYRSSSMAVNM
Trigger: CATGTTTACAGCCATCGACGAGCTCCTGTATGAGCAGCAGCTGAGCGCACACACACAGGGCCTGCAGAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000037698.13
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000224721.2
ENSMUST00000224930.2
ENSMUST00000225597.2
ENSMUST00000225942.2
CDS GCA 72 bp ACCCAAGGTCATTGGAGAGGGAGAAGACAGTGTGTCTaGTGTCACTGGAACCCGGGGTCCTCTGAGGATTTC +
Preference number: 6 (lower is better)
Translates to: TQGHWRGRRQCV*CHWNPGSSEDF
Trigger: GAAATCCTCAGAGGACCCCGGGTTCCAGTGACAGCAGACACACTGTCTTCTCCCTCTCCAATGACCTTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000225942.2
CDS CAA 90 bp TCAAGCTGCCATCAGGGCTGGGCTCTCTTATGGCTTCTTTCTGGCTaGCAGATGGCCACCTGCTTGCTGTGTTCTCATTCGGCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: SSCHQGWALLWLLSG*QMATCLLCSHSASS
Trigger: AGAAGAGGCCGAATGAGAACACAGCAAGCAGGTGGCCATCTGCAAGCCAGAAAGAAGCCATAAGAGAGCCCAGCCCTGATGGCAGCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS GCA 72 bp ATCAGGGCTGGGCTCTCTTATGGCTTCTTTCTGGCTTaGAGATGGCCACCTGCTTGCTGTGTTCTCATTCGG +
Preference number: 6 (lower is better)
Translates to: IRAGLSYGFFLA*RWPPACCVLIR
Trigger: CCGAATGAGAACACAGCAAGCAGGTGGCCATCTGCAAGCCAGAAAGAAGCCATAAGAGAGCCCAGCCCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS CCA 72 bp CAGTTCTGGGGTCCAAGATCAAGCTGCCATCAGGGCTaGGCTCTCTTATGGCTTCTTTCTGGCTTGCAGATG +
Preference number: 6 (lower is better)
Translates to: QFWGPRSSCHQG*ALLWLLSGLQM
Trigger: CATCTGCAAGCCAGAAAGAAGCCATAAGAGAGCCCAGCCCTGATGGCAGCTTGATCTTGGACCCCAGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS CAA 72 bp CATCAGGGCTGGGCTCTCTTATGGCTTCTTTCTGGCTaGCAGATGGCCACCTGCTTGCTGTGTTCTCATTCG +
Preference number: 6 (lower is better)
Translates to: HQGWALLWLLSG*QMATCLLCSHS
Trigger: CGAATGAGAACACAGCAAGCAGGTGGCCATCTGCAAGCCAGAAAGAAGCCATAAGAGAGCCCAGCCCTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037698.13
ENSMUST00000224721.2
CDS GCA 72 bp TACTCTCATCATCATATCCCCAAGAGAAGTCGGAGCTaGCTTCTGTTGAGACCCCTGTGCCTGCGTAGCTTG +
Preference number: 6 (lower is better)
Translates to: YSHHHIPKRSRS*LLLRPLCLRSL
Trigger: CAAGCTACGCAGGCACAGGGGTCTCAACAGAAGGCAGCTCCGACTTCTCTTGGGGATATGATGATGAGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225991.2
CDS CCA 72 bp GAGGAAATGTCATCCAGTCGCTCTGGAAGGGGGTGGTaGTTAAGAGCGTGCTTTGTTAGTCCTTTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: EEMSSSRSGRGW*LRACFVSPFSS
Trigger: GGAGCTGAAAGGACTAACAAAGCACGCTCTTAACCACCACCCCCTTCCAGAGCGACTGGATGACATTTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000037698.13
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000224721.2
ENSMUST00000224930.2
ENSMUST00000225597.2
ENSMUST00000225834.2
ENSMUST00000225942.2
ENSMUST00000225991.2
CDS TCA 72 bp CTGCACTTTCTCAGTGGCATTCTGGTCAAGTTCCTGTaGGAACTTGTATCTTTTCCATGGCTGTTGTTGGTA +
Preference number: 6 (lower is better)
Translates to: LHFLSGILVKFL*ELVSFPWLLLV
Trigger: TACCAACAACAGCCATGGAAAAGATACAAGTTCTCACAGGAACTTGACCAGAATGCCACTGAGAAAGTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225834.2
CDS TCA 72 bp GTAATGGGTGATTCTTGGGTGATGTCAGATTCACTGTaGGAACTTGTATCTTTTCCATGGCTGTTGTTGGTA +
Preference number: 6 (lower is better)
Translates to: VMGDSWVMSDSL*ELVSFPWLLLV
Trigger: TACCAACAACAGCCATGGAAAAGATACAAGTTCTCACAGTGAATCTGACATCACCCAAGAATCACCCATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000037698.13
ENSMUST00000051915.7
ENSMUST00000090499.13
ENSMUST00000090503.12
ENSMUST00000224110.2
ENSMUST00000224721.2
ENSMUST00000224930.2
ENSMUST00000225597.2
ENSMUST00000225942.2
ENSMUST00000225991.2
CDS TCA 72 bp TTTCCCCTTATACCAAATATGGTAGACTCTCTTTCTTaGGACAAGGTTGCTTCATGTGAAGCTGACACAGCA +
Preference number: 6 (lower is better)
Translates to: FPLIPNMVDSLS*DKVASCEADTA
Trigger: TGCTGTGTCAGCTTCACATGAAGCAACCTTGTCTCAAGAAAGAGAGTCTACCATATTTGGTATAAGGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090499.13
ENSMUST00000224721.2
ENSMUST00000225942.2