Pregenerated sensors for FAM13B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036501Ensembl transcript IDs: ENSMUST00000040506.8, ENSMUST00000235364.2, ENSMUST00000236786.2, ENSMUST00000238047.2, ENSMUST00000238059.2
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCTCTTCCGGAGGACCCTGGTTCAGTTTCTAGCACCCACACGGTaGCTCACAGCTCTCTATAACTTCAGTCCCAGAGGCCTGACCCTC | + |
|
Preference number: 1 (lower is better) Translates to: LLFRRTLVQFLAPTR*LTALYNFSPRGLTL Trigger: GAGGGTCAGGCCTCTGGGACTGAAGTTATAGAGAGCTGTGAGCCACCGTGTGGGTGCTAGAAACTGAACCAGGGTCCTCCGGAAGAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR CCA 90 bp | ATAATACTGGAGGGCAGTCCTCTCCCAGGGGGTGGTGAGTCATCCTaGCAGCCTGTGGAGACAGCTGAGCTTCTCCAGACTCACAGTCTT | + |
|
Preference number: 1 (lower is better) Translates to: IILEGSPLPGGGESS*QPVETAELLQTHSL Trigger: AAGACTGTGAGTCTGGAGAAGCTCAGCTGTCTCCACAGGCTGCCAGGATGACTCACCACCCCCTGGGAGAGGACTGCCCTCCAGTATTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR CCA 90 bp | CGCGGGGAGAGGTGGAGAGAAAACTCAGTGGTTGAAAGCACTCACTaGCTGCTCTTCCGGAGGACCCTGGTTCAGTTTCTAGCACCCACA | + |
|
Preference number: 1 (lower is better) Translates to: RGERWRENSVVESTH*LLFRRTLVQFLAPT Trigger: TGTGGGTGCTAGAAACTGAACCAGGGTCCTCCGGAAGAGCAGCCAGTGAGTGCTTTCAACCACTGAGTTTTCTCTCCACCTCTCCCCGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR TCA 90 bp | CCACACGGTGGCTCACAGCTCTCTATAACTTCAGTCCCAGAGGCCTaGCCCTCAAGGAGCACCAGGCACAGACACAGTGCAAAGACAAAT | + |
|
Preference number: 1 (lower is better) Translates to: PHGGSQLSITSVPEA*PSRSTRHRHSAKTN Trigger: ATTTGTCTTTGCACTGTGTCTGTGCCTGGTGCTCCTTGAGGGTCAGGCCTCTGGGACTGAAGTTATAGAGAGCTGTGAGCCACCGTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR TCA 90 bp | TCAGCTCAAGAGTTGCTTCTTTCGATGGCGTCTTCTCTTTCTGAATaGCTCTGGGCTCACCTTCACTCTCGCCGTCCTCATGGTCTAGAG | + |
|
Preference number: 1 (lower is better) Translates to: SAQELLLSMASSLSE*LWAHLHSRRPHGLE Trigger: CTCTAGACCATGAGGACGGCGAGAGTGAAGGTGAGCCCAGAGTCATTCAGAAAGAGAAGACGCCATCGAAAGAAGCAACTCTTGAGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR TCA 90 bp | ACCACAAACAAGCACACAATGGGACTCTCTGAGTGCCTGACAAAGTaGACGCAAGTACAGCCAAGCACACATGGTGAACTGTCAGGGAAC | + |
|
Preference number: 1 (lower is better) Translates to: TTNKHTMGLSECLTK*TQVQPSTHGELSGN Trigger: GTTCCCTGACAGTTCACCATGTGTGCTTGGCTGTACTTGCGTTCACTTTGTCAGGCACTCAGAGAGTCCCATTGTGTGCTTGTTTGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| 3UTR TCA 90 bp | TTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCTaGGTGCCTGACAAAGTGAACGCAAGTACAGCCAAGCACACATGG | + |
|
Preference number: 1 (lower is better) Translates to: FLAYWNHKQAHNGTL*VPDKVNASTAKHTW Trigger: CCATGTGTGCTTGGCTGTACTTGCGTTCACTTTGTCAGGCACTCAGAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| 3UTR GCA 90 bp | AGTCCCAGAGGCCTGACCCTCAAGGAGCACCAGGCACAGACACAGTaGAAAGACAAATACAGGCAAAGCAGCCATACGCATAAAAGTAAA | + |
|
Preference number: 1 (lower is better) Translates to: SPRGLTLKEHQAQTQ*KDKYRQSSHTHKSK Trigger: TTTACTTTTATGCGTATGGCTGCTTTGCCTGTATTTGTCTTTGCACTGTGTCTGTGCCTGGTGCTCCTTGAGGGTCAGGCCTCTGGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR TCA 90 bp | CTACTGGAACCACAAACAAGCACACAATGGGACTCTCTGAGTGCCTaGCAAAGTGAACGCAAGTACAGCCAAGCACACATGGTGAACTGT | + |
|
Preference number: 1 (lower is better) Translates to: LLEPQTSTQWDSLSA*QSERKYSQAHMVNC Trigger: ACAGTTCACCATGTGTGCTTGGCTGTACTTGCGTTCACTTTGTCAGGCACTCAGAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| 3UTR GCA 90 bp | GGGTGCTGGAGAAATAGCTCAGTAGTTAGAAACACATACTACTCTTaGAGAAGACCCGAGTTTGGTTTCCAGCACCTATGTGTCAGGCAG | + |
|
Preference number: 1 (lower is better) Translates to: GCWRNSSVVRNTYYS*RRPEFGFQHLCVRQ Trigger: CTGCCTGACACATAGGTGCTGGAAACCAAACTCGGGTCTTCTGCAAGAGTAGTATGTGTTTCTAACTACTGAGCTATTTCTCCAGCACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR CCA 90 bp | CTCCTTCAACCGTTTGGTAATCAGCTCAAGAGTTGCTTCTTTCGATaGCGTCTTCTCTTTCTGAATGACTCTGGGCTCACCTTCACTCTC | + |
|
Preference number: 1 (lower is better) Translates to: LLQPFGNQLKSCFFR*RLLFLNDSGLTFTL Trigger: GAGAGTGAAGGTGAGCCCAGAGTCATTCAGAAAGAGAAGACGCCATCGAAAGAAGCAACTCTTGAGCTGATTACCAAACGGTTGAAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR TCA 90 bp | AGGCAGCTCATGACTACACATCAAAGGGATCACAATGCAGTCTTCTaGCCTCCAGAAGCCCTCAACACATGTAAATATCCACACAAACAT | + |
|
Preference number: 1 (lower is better) Translates to: RQLMTTHQRDHNAVF*PPEALNTCKYPHKH Trigger: ATGTTTGTGTGGATATTTACATGTGTTGAGGGCTTCTGGAGGTCAGAAGACTGCATTGTGATCCCTTTGATGTGTAGTCATGAGCTGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR GCA 90 bp | TTACTGAGATTAAGGTTCCAGTCTCACTATGTAAACTTCTTCCTGTaGCTGGAGGATTGCTCAGTTGGTAAAGTGGTTCTTGCACAACCC | + |
|
Preference number: 1 (lower is better) Translates to: LLRLRFQSHYVNFFL*LEDCSVGKVVLAQP Trigger: GGGTTGTGCAAGAACCACTTTACCAACTGAGCAATCCTCCAGGCACAGGAAGAAGTTTACATAGTGAGACTGGAACCTTAATCTCAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR GCA 90 bp | AGATACTTATTGCTCTACCATATCCCGATGTCATCTTTCTGGGGATaGCTGTTAATCTTATATCTTCAGCCCATAGCTCCAAAACTCCCT | + |
|
Preference number: 1 (lower is better) Translates to: RYLLLYHIPMSSFWG*LLILYLQPIAPKLP Trigger: AGGGAGTTTTGGAGCTATGGGCTGAAGATATAAGATTAACAGGCATCCCCAGAAAGATGACATCGGGATATGGTAGAGCAATAAGTATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238059.2 |
||
| 3UTR CCA 90 bp | AATAAATATTCCTTCCTCTCAGGACAGCCATCTTCACTATCCCCGTaGTCACTACAAGGCTCTAACAGTATACCTACAGACTCATTATTT | + |
|
Preference number: 1 (lower is better) Translates to: NKYSFLSGQPSSLSP*SLQGSNSIPTDSLF Trigger: AAATAATGAGTCTGTAGGTATACTGTTAGAGCCTTGTAGTGACCACGGGGATAGTGAAGATGGCTGTCCTGAGAGGAAGGAATATTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR GCA 90 bp | AATACAGGCAAAGCAGCCATACGCATAAAAGTAAAAATGAATGGGTaGTGGAGAAATAGCTCAGTAGTTAGAAACACATACTACTCTTGC | + |
|
Preference number: 1 (lower is better) Translates to: NTGKAAIRIKVKMNG*WRNSSVVRNTYYSC Trigger: GCAAGAGTAGTATGTGTTTCTAACTACTGAGCTATTTCTCCAGCACCCATTCATTTTTACTTTTATGCGTATGGCTGCTTTGCCTGTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR CCA 90 bp | CTAAATAGATACTTATTGCTCTACCATATCCCGATGTCATCTTTCTaGGGATGCCTGTTAATCTTATATCTTCAGCCCATAGCTCCAAAA | + |
|
Preference number: 1 (lower is better) Translates to: LNRYLLLYHIPMSSF*GCLLILYLQPIAPK Trigger: TTTTGGAGCTATGGGCTGAAGATATAAGATTAACAGGCATCCCCAGAAAGATGACATCGGGATATGGTAGAGCAATAAGTATCTATTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238059.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGAGGGCAGTCCTCTCCCAGGGGGTGGTGAGTCATCCTGGCAGCCTGTGGAGAAACACAAGCACTTTATaGCGTCAACTTTCAAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: WRAVLSQGVVSHPGSLWRNTSTL*RQLSRN Trigger: GTTCCTTGAAAGTTGACGCCATAAAGTGCTTGTGTT...TCTCCACAGGCTGCCAGGATGACTCACCACCCCCTGGGAGAGGACTGCCCTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR-3UTR TCA 90 bp | CTAAGTGTGGAGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAGCCAAGCACACATGGTaGACTGTCAGGGAACACAAG | + |
|
Preference number: 2 (lower is better) Translates to: LSVERICGNVEQLSLPTGAKHTW*TVREHK Trigger: CTTGTGTTCCCTGACAGTTCACCATGTGTGCTTGGC...TCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCTCCACACTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| 3UTR CAA 90 bp | CTTCACTCTCGCCGTCCTCATGGTCTAGAGAAGAGCCAAAACTTTTaGGCAGAGTGTTACTCCGAGGACGTGTCTGAGGCGCAAATTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LHSRRPHGLEKSQNF*AECYSEDVSEAQIL Trigger: GAGAATTTGCGCCTCAGACACGTCCTCGGAGTAACACTCTGCCAAAAAGTTTTGGCTCTTCTCTAGACCATGAGGACGGCGAGAGTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR CAA 90 bp | ATATCCTCAGGAAGGTGCCGCTCGGCACGGTTCTCCTTCAACCGTTaGGTAATCAGCTCAAGAGTTGCTTCTTTCGATGGCGTCTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: ISSGRCRSARFSFNR*VISSRVASFDGVFS Trigger: AGAGAAGACGCCATCGAAAGAAGCAACTCTTGAGCTGATTACCAAACGGTTGAAGGAGAACCGTGCCGAGCGGCACCTTCCTGAGGATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCTCATGACTACACATCAAAGGGATCACAATGCAGTCTTCTGACCTCCAGACTCCGAGGACGTGTCTaGGGCGCAAATTCTCCATCA | + |
|
Preference number: 2 (lower is better) Translates to: AAHDYTSKGSQCSLLTSRLRGRV*GANSPS Trigger: TGATGGAGAATTTGCGCCTCAGACACGTCCTCGGAG...TCTGGAGGTCAGAAGACTGCATTGTGATCCCTTTGATGTGTAGTCATGAGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGAGCACCAGGCACAGACACAGTGCAAAGACAAATACAGGCAAAGCAGCCATAGTGTCAGGCAGCTCATaGCTACACATCAAAGGGATC | + |
|
Preference number: 2 (lower is better) Translates to: RSTRHRHSAKTNTGKAAIVSGSS*LHIKGI Trigger: GATCCCTTTGATGTGTAGTCATGAGCTGCCTGACAC...TATGGCTGCTTTGCCTGTATTTGTCTTTGCACTGTGTCTGTGCCTGGTGCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGAGGTGGAGAGAAAACTCAGTGGTTGAAAGCACTCACTGGCTGCTCTTCCGGAAATCTAAACTACGATaGGATAATACTGGAGGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: ERWRENSVVESTHWLLFRKSKLR*DNTGGQ Trigger: CTGCCCTCCAGTATTATCTCATCGTAGTTTAGATTT...CCGGAAGAGCAGCCAGTGAGTGCTTTCAACCACTGAGTTTTCTCTCCACCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR-3UTR CCA 90 bp | CTAAGTGTGGAGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAAACACAAGCACTTTATaGCGTCAACTTTCAAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LSVERICGNVEQLSLPTGNTSTL*RQLSRN Trigger: GTTCCTTGAAAGTTGACGCCATAAAGTGCTTGTGTT...TCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCTCCACACTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| 3UTR-3UTR TCA 90 bp | AACGCTTCTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGCACAATGGGACTCTCTaGGTGCCTGACAAAGTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: NASSNSRSILRSFFFSALHNGTL*VPDKVN Trigger: GTTCACTTTGTCAGGCACTCAGAGAGTCCCATTGTG...CAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTGAAGAAGCGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCTCATGACTACACATCAAAGGGATCACAATGCAGTCTTCTGACCTCCAGACGAGCCAGTTTTTCTTaGTTTTCTTCAGCATCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: AAHDYTSKGSQCSLLTSRRASFS*FSSASD Trigger: ATCTGATGCTGAAGAAAATCAAGAAAAACTGGCTCG...TCTGGAGGTCAGAAGACTGCATTGTGATCCCTTTGATGTGTAGTCATGAGCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR-3UTR TCA 90 bp | TATACACGCTGCTTCTCCTTGAACACCAACACTCTGACCTTCCGTTACTTCCAATTCCTACACACAAGTTaGAGAGCAAAGAGTTTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: YTRCFSLNTNTLTFRYFQFLHTS*RAKSFP Trigger: TGGAAAACTCTTTGCTCTTCAACTTGTGTGTAGGAA...TTGGAAGTAACGGAAGGTCAGAGTGTTGGTGTTCAAGGAGAAGCAGCGTGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238059.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTAAATGCTACAGGTTCTTCATTATATTAACAGTGGTTGTAGCCCTGGCTACAAGTGTGGAGAGGATCTaGGGGAATGTGGAACAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: TKCYRFFIILTVVVALATSVERI*GNVEQL Trigger: AAGCTGTTCCACATTCCCGCAGATCCTCTCCACACT...TGTAGCCAGGGCTACAACCACTGTTAATATAATGAAGAACCTGTAGCATTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR-3UTR CCA 90 bp | AACGCTTCTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGAGAGCCAAAACTTTTTaGCAGAGTGTTACTCCGAGG | + |
|
Preference number: 2 (lower is better) Translates to: NASSNSRSILRSFFFSALRAKTF*QSVTPR Trigger: CCTCGGAGTAACACTCTGCCAAAAAGTTTTGGCTCT...CAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTGAAGAAGCGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR-3UTR TCA 90 bp | GATTTTCTTCAGCATCAGATTCTAAGTTTTCCAAGGACGACTGTGTGTGCACGCTCTCATCTTTTGAACTaGAGGATGACCTTCGAATTC | + |
|
Preference number: 2 (lower is better) Translates to: DFLQHQILSFPRTTVCARSHLLN*RMTFEF Trigger: GAATTCGAAGGTCATCCTTCAGTTCAAAAGATGAGA...GCGTGCACACACAGTCGTCCTTGGAAAACTTAGAATCTGATGCTGAAGAAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTGAACACCAACACTCTGACCTTCCGTTACTTCCAATTCAGTGTTGGCATTCAAGCATCAATCCTTACTaGCATGAAAAGAGTCTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LEHQHSDLPLLPIQCWHSSINPY*HEKSLG Trigger: TCCAAGACTCTTTTCATGCCAGTAAGGATTGATGCT...TGAATGCCAACACTGAATTGGAAGTAACGGAAGGTCAGAGTGTTGGTGTTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR CAA 90 bp | TTGCTGATAAGAACTTCAAGAAGTCTAAGCTTGGCTTTGATTCTCTaGTATTCCTTATATTCCTCAAGCACCGGAACACGATCCTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LLIRTSRSLSLALIL*YSLYSSSTGTRSSF Trigger: GAAGGAGGATCGTGTTCCGGTGCTTGAGGAATATAAGGAATACAAGAGAATCAAAGCCAAGCTTAGACTTCTTGAAGTTCTTATCAGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTCTCCTTGAACACCAACACTCTGACCTTCCGTTACTTCCAATTCAGTGTTGGTCATCTTTCTGGGGATaGCTGTTAATCTTATATCTT | + |
|
Preference number: 2 (lower is better) Translates to: LLLEHQHSDLPLLPIQCWSSFWG*LLILYL Trigger: AAGATATAAGATTAACAGGCATCCCCAGAAAGATGA...CCAACACTGAATTGGAAGTAACGGAAGGTCAGAGTGTTGGTGTTCAAGGAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238059.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGCTGATAAGAACTTCAAGAAGTCTAAGCTTGGCTTTGATTCTCTTGTATTCCGTAAACTTCTTCCTGTaGCTGGAGGATTGCTCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LLIRTSRSLSLALILLYSVNFFL*LEDCSV Trigger: AACTGAGCAATCCTCCAGGCACAGGAAGAAGTTTAC...GGAATACAAGAGAATCAAAGCCAAGCTTAGACTTCTTGAAGTTCTTATCAGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR-3UTR CCA 90 bp | AACGCTTCTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGAAAATGAATGGGTGCTaGAGAAATAGCTCAGTAGTT | + |
|
Preference number: 2 (lower is better) Translates to: NASSNSRSILRSFFFSALKMNGC*RNSSVV Trigger: AACTACTGAGCTATTTCTCCAGCACCCATTCATTTT...CAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTGAAGAAGCGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR CAA 90 bp | TTTGAAGAGTCTTGTTTGCTGATAAGAACTTCAAGAAGTCTAAGCTaGGCTTTGATTCTCTTGTATTCCTTATATTCCTCAAGCACCGGA | + |
|
Preference number: 2 (lower is better) Translates to: FEESCLLIRTSRSLS*ALILLYSLYSSSTG Trigger: TCCGGTGCTTGAGGAATATAAGGAATACAAGAGAATCAAAGCCAAGCTTAGACTTCTTGAAGTTCTTATCAGCAAACAAGACTCTTCAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGCTGATAAGAACTTCAAGAAGTCTAAGCTTGGCTTTGATTCTCTTGTATTCCGAATCCAGAATCAAGTaGGGCAATTTATCACTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LLIRTSRSLSLALILLYSESRIK*GNLSLS Trigger: TGACAGTGATAAATTGCCGCACTTGATTCTGGATTC...GGAATACAAGAGAATCAAAGCCAAGCTTAGACTTCTTGAAGTTCTTATCAGCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR-3UTR GCA 90 bp | GGAACACAAGCACTTTATGGCGTCAACTTTCAAGGAACATATTTTATATGGATTAGGAAACGTTGGCTTTaGCCAAAATCTAAACTACGA | + |
|
Preference number: 2 (lower is better) Translates to: GTQALYGVNFQGTYFIWIRKRWL*PKSKLR Trigger: TCGTAGTTTAGATTTTGGGCAAAGCCAACGTTTCCT...AATCCATATAAAATATGTTCCTTGAAAGTTGACGCCATAAAGTGCTTGTGTTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTTTTCTCATCTTTTGAACTGAAGGATGACCTTCGAATTCTAGTGAAGGAACTTCCAATTCAGTGTTaGCATTCAAATCACGTATCT | + |
|
Preference number: 2 (lower is better) Translates to: SLFSSFELKDDLRILVKELPIQC*HSNHVS Trigger: AGATACGTGATTTGAATGCCAACACTGAATTGGAAG...TTCCTTCACTAGAATTCGAAGGTCATCCTTCAGTTCAAAAGATGAGAAAAGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR CCA 72 bp | GAGGGCAGTCCTCTCCCAGGGGGTGGTGAGTCATCCTaGCAGCCTGTGGAGACAGCTGAGCTTCTCCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: EGSPLPGGGESS*QPVETAELLQT Trigger: AGTCTGGAGAAGCTCAGCTGTCTCCACAGGCTGCCAGGATGACTCACCACCCCCTGGGAGAGGACTGCCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR CCA 72 bp | CGGAGGACCCTGGTTCAGTTTCTAGCACCCACACGGTaGCTCACAGCTCTCTATAACTTCAGTCCCAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: RRTLVQFLAPTR*LTALYNFSPRG Trigger: GCCTCTGGGACTGAAGTTATAGAGAGCTGTGAGCCACCGTGTGGGTGCTAGAAACTGAACCAGGGTCCTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR TCA 72 bp | TGTGCCGTTTCTCCTTCTATGATTGGCTGTAACATCTaGCCCCGGCGCTTCGTGGAAGGAGAACCAAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: CAVSPSMIGCNI*PRRFVEGEPRT Trigger: TGTCCTTGGTTCTCCTTCCACGAAGCGCCGGGGTCAGATGTTACAGCCAATCATAGAAGGAGAAACGGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR GCA 72 bp | AAGGAGCCTGCGTGTTTCCTAAGTGTGGAGAGGATCTaGGGGAATGTGGAACAGCTTTCCTTGCCTACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: KEPACFLSVERI*GNVEQLSLPTG Trigger: TCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCTCCACACTTAGGAAACACGCAGGCTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGAGGTGGAGAGAAAACTCAGTGGTTGAAAGCACTCACTGGCTGCTCTTCCAGCAAGTCAGAGTGCTaGATATACAAGCCCAACACC | + |
|
Preference number: 3 (lower is better) Translates to: GRGGEKTQWLKALTGCSSSKSEC*IYKPNT Trigger: GGTGTTGGGCTTGTATATCAAGCACTCTGACTTGCT...GGAAGAGCAGCCAGTGAGTGCTTTCAACCACTGAGTTTTCTCTCCACCTCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR TCA 72 bp | GAGTTGCTTCTTTCGATGGCGTCTTCTCTTTCTGAATaGCTCTGGGCTCACCTTCACTCTCGCCGTCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: ELLLSMASSLSE*LWAHLHSRRPH Trigger: ATGAGGACGGCGAGAGTGAAGGTGAGCCCAGAGTCATTCAGAAAGAGAAGACGCCATCGAAAGAAGCAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR CCA 72 bp | AGGTGGAGAGAAAACTCAGTGGTTGAAAGCACTCACTaGCTGCTCTTCCGGAGGACCCTGGTTCAGTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: RWRENSVVESTH*LLFRRTLVQFL Trigger: TAGAAACTGAACCAGGGTCCTCCGGAAGAGCAGCCAGTGAGTGCTTTCAACCACTGAGTTTTCTCTCCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR TCA 72 bp | AAGCACACAATGGGACTCTCTGAGTGCCTGACAAAGTaGACGCAAGTACAGCCAAGCACACATGGTGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: KHTMGLSECLTK*TQVQPSTHGEL Trigger: CAGTTCACCATGTGTGCTTGGCTGTACTTGCGTTCACTTTGTCAGGCACTCAGAGAGTCCCATTGTGTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| 3UTR TCA 72 bp | AGGAAACGTTGGCTTTGCCCAAAATCTAAACTACGATaGGATAATACTGGAGGGCAGTCCTCTCCCAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RKRWLCPKSKLR*DNTGGQSSPRG Trigger: CCCCCTGGGAGAGGACTGCCCTCCAGTATTATCTCATCGTAGTTTAGATTTTGGGCAAAGCCAACGTTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR GCA 72 bp | CAGGCAGCTCATGACTACACATCAAAGGGATCACAATaGAGTCTTCTGACCTCCAGAAGCCCTCAACACATG | + |
|
Preference number: 3 (lower is better) Translates to: QAAHDYTSKGSQ*SLLTSRSPQHM Trigger: CATGTGTTGAGGGCTTCTGGAGGTCAGAAGACTGCATTGTGATCCCTTTGATGTGTAGTCATGAGCTGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR CCA 72 bp | TCCTTCCTCTCAGGACAGCCATCTTCACTATCCCCGTaGTCACTACAAGGCTCTAACAGTATACCTACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SFLSGQPSSLSP*SLQGSNSIPTD Trigger: GTCTGTAGGTATACTGTTAGAGCCTTGTAGTGACCACGGGGATAGTGAAGATGGCTGTCCTGAGAGGAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR TCA 72 bp | TACTGGAACCACAAACAAGCACACAATGGGACTCTCTaGGTGCCTGACAAAGTGAACGCAAGTACAGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: YWNHKQAHNGTL*VPDKVNASTAK Trigger: CTTGGCTGTACTTGCGTTCACTTTGTCAGGCACTCAGAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| 3UTR TCA 72 bp | CACGCATCCCTCTTGTCAGAGAAGCTAAGTACAAGCTaGGTACATACACAGAAGCTGCCCGGGTACTTGATA | + |
|
Preference number: 3 (lower is better) Translates to: HASLLSEKLSTS*VHTQKLPGYLI Trigger: TATCAAGTACCCGGGCAGCTTCTGTGTATGTACTCAGCTTGTACTTAGCTTCTCTGACAAGAGGGATGCGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR CCA 72 bp | TCTTCCTGTGCCTGGAGGATTGCTCAGTTGGTAAAGTaGTTCTTGCACAACCCTGAGGAACCTGAACTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSCAWRIAQLVK*FLHNPEEPELK Trigger: TTTGAGTTCAGGTTCCTCAGGGTTGTGCAAGAACCACTTTACCAACTGAGCAATCCTCCAGGCACAGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTTCCAAACACGCTGCTTCTCCTaGAACACCAACACTCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: SNSRSILRSFFFSALAFQTRCFS*NTNTLT Trigger: GGTCAGAGTGTTGGTGTTCAAGGAGAAGCAGCGTGT...TTGGAAAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAGGCATGAAAAGAGTCTaGGATTTTCTTAAACGACTT | + |
|
Preference number: 3 (lower is better) Translates to: WRGSAGMWNSFPCLLEPQGMKRV*DFLKRL Trigger: AAGTCGTTTAAGAAAATCCAAGACTCTTTTCATGCC...TTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR TCA 72 bp | AGTTTGGTTTCCAGCACCTATGTGTCAGGCAGCTCATaGCTACACATCAAAGGGATCACAATGCAGTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SLVSSTYVSGSS*LHIKGITMQSS Trigger: AGAAGACTGCATTGTGATCCCTTTGATGTGTAGTCATGAGCTGCCTGACACATAGGTGCTGGAAACCAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTGTTGTGCACCTATAATCCCAACTCTTCAAAAATCTCTGGCCAGCCAGTAAAACACATACTACTCTaGCAGAAGACCCGAGTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: TVLCTYNPNSSKISGQPVKHILL*QKTRVW Trigger: CCAAACTCGGGTCTTCTGCAAGAGTAGTATGTGTTT...TACTGGCTGGCCAGAGATTTTTGAAGAGTTGGGATTATAGGTGCACAACACTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR GCA 72 bp | TTGCTCTACCATATCCCGATGTCATCTTTCTGGGGATaGCTGTTAATCTTATATCTTCAGCCCATAGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LLYHIPMSSFWG*LLILYLQPIAP Trigger: TGGAGCTATGGGCTGAAGATATAAGATTAACAGGCATCCCCAGAAAGATGACATCGGGATATGGTAGAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238059.2 |
||
| 3UTR TCA 72 bp | TCTAATTCCAGCACTCTATGGCAATGCCATGTGAGGTaGAAACAACACAAAAACACAGGAGATCACGGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: SNSSTLWQCHVR*KQHKNTGDHGL Trigger: TAAGCCGTGATCTCCTGTGTTTTTGTGTTGTTTTCACCTCACATGGCATTGCCATAGAGTGCTGGAATTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR TCA 72 bp | ATGACTACACATCAAAGGGATCACAATGCAGTCTTCTaGCCTCCAGAAGCCCTCAACACATGTAAATATCCA | + |
|
Preference number: 3 (lower is better) Translates to: MTTHQRDHNAVF*PPEALNTCKYP Trigger: TGGATATTTACATGTGTTGAGGGCTTCTGGAGGTCAGAAGACTGCATTGTGATCCCTTTGATGTGTAGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR TCA 72 bp | AAATGTCTAATTCCAGCACTCTATGGCAATGCCATGTaGGGTGAAAACAACACAAAAACACAGGAGATCACG | + |
|
Preference number: 3 (lower is better) Translates to: KCLIPALYGNAM*GENNTKTQEIT Trigger: CGTGATCTCCTGTGTTTTTGTGTTGTTTTCACCTCACATGGCATTGCCATAGAGTGCTGGAATTAGACATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR GCA 72 bp | AGAAATAGCTCAGTAGTTAGAAACACATACTACTCTTaGAGAAGACCCGAGTTTGGTTTCCAGCACCTATGT | + |
|
Preference number: 3 (lower is better) Translates to: RNSSVVRNTYYS*RRPEFGFQHLC Trigger: ACATAGGTGCTGGAAACCAAACTCGGGTCTTCTGCAAGAGTAGTATGTGTTTCTAACTACTGAGCTATTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGCAAAGCAGCCATACGCATAAAAGTAAAAATGAATGGGTGCTGGAGAAATAAAAGAGTAAAACTCTaGTCCTTTGCTAACAGCCGT | + |
|
Preference number: 3 (lower is better) Translates to: TGKAAIRIKVKMNGCWRNKRVKL*SFANSR Trigger: ACGGCTGTTAGCAAAGGACAAGAGTTTTACTCTTTT...ATTTCTCCAGCACCCATTCATTTTTACTTTTATGCGTATGGCTGCTTTGCCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR TCA 72 bp | GACTTCATTATCTGCAGTAGTACCAGCCACAGGTTTTaGACACTTAATGTTACCATCACTGGCATTAGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: DFIICSSTSHRF*TLNVTITGISS Trigger: ACTACTAATGCCAGTGATGGTAACATTAAGTGTTCAAAACCTGTGGCTGGTACTACTGCAGATAATGAAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR TCA 72 bp | ACTGAGAATGTGGGCTTATTAGCAAGTCAGAGTGCTTaGTATACAAGCCCAACACCTGAAACCCATATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TENVGLLASQSA*YTSPTPETHIK Trigger: TTTTATATGGGTTTCAGGTGTTGGGCTTGTATATCAAGCACTCTGACTTGCTAATAAGCCCACATTCTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR CCA 72 bp | TACTTATTGCTCTACCATATCCCGATGTCATCTTTCTaGGGATGCCTGTTAATCTTATATCTTCAGCCCATA | + |
|
Preference number: 3 (lower is better) Translates to: YLLLYHIPMSSF*GCLLILYLQPI Trigger: TATGGGCTGAAGATATAAGATTAACAGGCATCCCCAGAAAGATGACATCGGGATATGGTAGAGCAATAAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238059.2 |
||
| 3UTR CCA 72 bp | GCAGCCATACGCATAAAAGTAAAAATGAATGGGTGCTaGAGAAATAGCTCAGTAGTTAGAAACACATACTAC | + |
|
Preference number: 3 (lower is better) Translates to: AAIRIKVKMNGC*RNSSVVRNTYY Trigger: GTAGTATGTGTTTCTAACTACTGAGCTATTTCTCCAGCACCCATTCATTTTTACTTTTATGCGTATGGCTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR CAA 72 bp | GGCTGCGCGGGGAGAGGTGGAGAGAAAACTCAGTGGTaGAAAGCACTCACTGGCTGCTCTTCCGGAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: GCAGRGGEKTQW*KALTGCSSGGP Trigger: GGGTCCTCCGGAAGAGCAGCCAGTGAGTGCTTTCAACCACTGAGTTTTCTCTCCACCTCTCCCCGCGCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAATCTCCCAGGGGGTGGTaGGTCATCCTGGCAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WRGSAGMWNSFPCLLEPQSPRGW*VILAAC Trigger: ACAGGCTGCCAGGATGACTCACCACCCCCTGGGAGA...TTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| 3UTR CAA 72 bp | CGCCGTCCTCATGGTCTAGAGAAGAGCCAAAACTTTTaGGCAGAGTGTTACTCCGAGGACGTGTCTGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RRPHGLEKSQNF*AECYSEDVSEA Trigger: CGCCTCAGACACGTCCTCGGAGTAACACTCTGCCAAAAAGTTTTGGCTCTTCTCTAGACCATGAGGACGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| 3UTR CAA 72 bp | GGAAGGTGCCGCTCGGCACGGTTCTCCTTCAACCGTTaGGTAATCAGCTCAAGAGTTGCTTCTTTCGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRCRSARFSFNR*VISSRVASFDG Trigger: GCCATCGAAAGAAGCAACTCTTGAGCTGATTACCAAACGGTTGAAGGAGAACCGTGCCGAGCGGCACCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR TCA 90 bp | CTAAGTGTGGAGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGACTCCGAGGACGTGTCTaGGGCGCAAATTCTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSVERICGNVEQLSLPTGLRGRV*GANSPS Trigger: TGATGGAGAATTTGCGCCTCAGACACGTCCTCGGAG...TCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCTCCACACTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGTGTGGAGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGACGGAACCTCATTGTCTaGATGTCCTCCCTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSVERICGNVEQLSLPTGRNLIV*MSSLLQ Trigger: CTGCAGCAGGGAGGACATCCAGACAATGAGGTTCCG...TCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCTCCACACTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACACATCCTGGCAGCCTGTaGAGACAGCTGAGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGSAGMWNSFPCLLEPQTHPGSL*RQLSFS Trigger: GGAGAAGCTCAGCTGTCTCCACAGGCTGCCAGGATG...TGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGTGTGGAGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGATGTGCCTTTCTTCCCTaGTCACCGGCCTTCCGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSVERICGNVEQLSLPTGCAFLP*SPAFRV Trigger: AACACGGAAGGCCGGTGACCAGGGAAGAAAGGCACA...TCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCTCCACACTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR CCA 90 bp | GGGCATTCCTTCCATTTTGTTGATAGAACGCTTCTTCAAACTCCCGTAGCATCTGACCCCGGCGCTTCGTaGAAGGAGAACCCGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GHSFHFVDRTLLQTPVASDPGAS*KENPAF Trigger: GAAGGCCGGGTTCTCCTTCCACGAAGCGCCGGGGTC...AGATGCTACGGGAGTTTGAAGAAGCGTTCTATCAACAAAATGGAAGGAATGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235364.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAACAACGTGGCGGACTATaGACGGAACCTCATTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WRGSAGMWNSFPCLLEPQQRGGL*TEPHCL Trigger: CAGACAATGAGGTTCCGTTCATAGTCCGCCACGTTG...TTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR TCA 90 bp | GAGAGGTGGAGAGAAAACTCAGTGGTTGAAAGCACTCACTGGCTGCTCTTCCGGGCATTCCCATTGACTTaGAACAGCCCTTGTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ERWRENSVVESTHWLLFRAFPLT*NSPCCS Trigger: GGAGCAACAAGGGCTGTTTCAAGTCAATGGGAATGC...CCGGAAGAGCAGCCAGTGAGTGCTTTCAACCACTGAGTTTTCTCTCCACCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR TCA 90 bp | GGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGCCTGTGGAGACAGCTaGGCTTCTCCAGACTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GMWNSFPCLLEPQTSTQWACGDS*ASPDSQ Trigger: CTGTGAGTCTGGAGAAGCTCAGCTGTCTCCACAGGC...CCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR GCA 90 bp | GGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCCCACTGTCGTATCTCTaGCGAAGCCACTCCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTAFLAYWNHKQAHNGTLPLSYL*RSHSTV Trigger: GACAGTGGAGTGGCTTCGGCAGAGATACGACAGTGG...GAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAGCAGCACCTCTGGCATaGCAGCTGACTTTTCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: WRGSAGMWNSFPCLLEPQAAPLA*QLTFLH Trigger: GTGTAGAAAAGTCAGCTGGCATGCCAGAGGTGCTGC...TTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR CCA 90 bp | TGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTGGTGGTGAGTCATCCTaGCAGCCTGTGGAGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WNSFPCLLEPQTSTQWDSGGESS*QPVETA Trigger: AGCTGTCTCCACAGGCTGCCAGGATGACTCACCACC...AGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR TCA 90 bp | GGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCGGCGTCTTCTCTTTCTaGATGACTCTGGGCTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GTAFLAYWNHKQAHNGTLGVFSF*MTLGSP Trigger: AGGTGAGCCCAGAGTCATTCAGAAAGAGAAGACGCC...GAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR GCA 90 bp | GGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCTCTGGATGTCCTCCCTaGTGCAGCTCATCAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GTAFLAYWNHKQAHNGTLSGCPP*CSSSSG Trigger: TCCACTTGATGAGCTGCAGCAGGGAGGACATCCAGA...GAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR GCA 90 bp | AGAGCCAAAACTTTTTGGCAGAGTGTTACTCCGAGGACGTGTCTGAGGCGCAAATCTGGATGTCCTCCCTaGTGCAGCTCATCAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RAKTFWQSVTPRTCLRRKSGCPP*CSSSSG Trigger: TCCACTTGATGAGCTGCAGCAGGGAGGACATCCAGA...TTTGCGCCTCAGACACGTCCTCGGAGTAACACTCTGCCAAAAAGTTTTGGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAGGCTCAGGGAGCTCCTaGAGGAAAAACCTAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGSAGMWNSFPCLLEPQTGSGSS*RKNLRR Trigger: TCTCCTTAGGTTTTTCCTGCAGGAGCTCCCTGAGCC...TGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAGCAGCACCTCTGGCATaGCAGCTGACTTTTCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: RGSAGMWNSFPCLLEPQTAAPLA*QLTFLH Trigger: GTGTAGAAAAGTCAGCTGGCATGCCAGAGGTGCTGC...TGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| 3UTR CAA 72 bp | GTGGAGAGGATCTGCGGGAATGTGGAACAGCTTTCCTaGCCTACTGGAACCACAAACAAGCACACAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VERICGNVEQLS*PTGTTNKHTMG Trigger: TCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR GCA 90 bp | GGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCTCAGTCATCCTTAACTaGAGCACCTCTGGCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTAFLAYWNHKQAHNGTLSVILN*STSGMP Trigger: TGGCATGCCAGAGGTGCTGCAGTTAAGGATGACTGA...GAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTTACCTTCGGATTGGCTaGAATGTCGCTGTAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CGTAFLAYWNHKQAHNGTYLRIG*NVAVGG Trigger: CCCTCCTACAGCGACATTGCAGCCAATCCGAAGGTA...AGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACACTCTCGCCGTCCTCATaGTCTAGAGAAGAGCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RGSAGMWNSFPCLLEPQTLSPSS*SREEPK Trigger: TTTTGGCTCTTCTCTAGACCATGAGGACGGCGAGAG...TGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR TCA 90 bp | TATACACGCTGCTTCTCCTTGAACACCAACACTCTGACCTTCCGTTACTTCCAACAACGTGGCGGACTATaGACGGAACCTCATTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YTRCFSLNTNTLTFRYFQQRGGL*TEPHCL Trigger: CAGACAATGAGGTTCCGTTCATAGTCCGCCACGTTG...TTGGAAGTAACGGAAGGTCAGAGTGTTGGTGTTCAAGGAGAAGCAGCGTGTATA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR TCA 90 bp | TGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTGCATTCCCATTGACTTaGAACAGCCCTTGTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WNSFPCLLEPQTSTQWDSAFPLT*NSPCCS Trigger: GGAGCAACAAGGGCTGTTTCAAGTCAATGGGAATGC...AGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR TCA 90 bp | GAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCTGAAAGCTGCAGCAAGTaGATATGCAAGCTGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EQLSLPTGTTNKHTMGLSESCSK*ICKLPG Trigger: ACCTGGCAGCTTGCATATTCACTTGCTGCAGCTTTC...AGAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR TCA 90 bp | CGAGTTTGGTTTCCAGCACCTATGTGTCAGGCAGCTCATGACTACACATCAAAGGAAAGCTGCAGCAAGTaGATATGCAAGCTGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RVWFPAPMCQAAHDYTSKESCSK*ICKLPG Trigger: ACCTGGCAGCTTGCATATTCACTTGCTGCAGCTTTC...CTTTGATGTGTAGTCATGAGCTGCCTGACACATAGGTGCTGGAAACCAAACTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR TCA 90 bp | TGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCTCTGGCATGCCAGCTaGCTTTTCTACACCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WNSFPCLLEPQTSTQWDSLWHAS*LFYTFF Trigger: GAAGAAGGTGTAGAAAAGTCAGCTGGCATGCCAGAG...AGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR TCA 90 bp | GAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGCTCTGGCATGCCAGCTaGCTTTTCTACACCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ECGTAFLAYWNHKQAHNGLWHAS*LFYTFF Trigger: GAAGAAGGTGTAGAAAAGTCAGCTGGCATGCCAGAG...CCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTGGATGTCCTCCCTGCTaGAGCTCATCAAGTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: CGTAFLAYWNHKQAHNGTGCPPC*SSSSGI Trigger: AATTCCACTTGATGAGCTGCAGCAGGGAGGACATCC...AGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR CCA 90 bp | CTAAGTGTGGAGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAAGAGCCAAAACTTTTTaGCAGAGTGTTACTCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSVERICGNVEQLSLPTGRAKTF*QSVTPR Trigger: CCTCGGAGTAACACTCTGCCAAAAAGTTTTGGCTCT...TCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCTCCACACTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| 3UTR CAA 72 bp | ATTCTAAGTTTTCCAAGGACGACTGTGTGTGCACGCTaGTGCTCAAGATGTCACCTAACTCAGAGGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ILSFPRTTVCAR*CSRCHLTQRRG Trigger: GCCTCTCCTCTGAGTTAGGTGACATCTTGAGCACAAGCGTGCACACACAGTCGTCCTTGGAAAACTTAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR TCA 90 bp | CCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTTCCAAAGTTGTTCTCCGAGGACGTGTCTaGGGCGCAAATTCTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PVASYVVSFSQLWLSKVVLRGRV*GANSPS Trigger: TGATGGAGAATTTGCGCCTCAGACACGTCCTCGGAG...AACAACTTTGGAAAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235364.2 |
||
| CDS-3UTR TCA 90 bp | GGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGTCTTCTCTTTCTGAATaGCTCTGGGCTCACCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GMWNSFPCLLEPQTSTQWSSLSE*LWAHLH Trigger: GTGAAGGTGAGCCCAGAGTCATTCAGAAAGAGAAGA...CCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR GCA 90 bp | GTACAGTGTTGTGCACCTATAATCCCAACTCTTCAAAAATCTCTGGCCAGCCAGTCAGTCATCCTTAACTaGAGCACCTCTGGCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VQCCAPIIPTLQKSLASQSVILN*STSGMP Trigger: TGGCATGCCAGAGGTGCTGCAGTTAAGGATGACTGA...CTGGCTGGCCAGAGATTTTTGAAGAGTTGGGATTATAGGTGCACAACACTGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR GCA 90 bp | GGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGCTGCCAAGACTTAAATaGAGGAAACGGCTCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GMWNSFPCLLEPQTSTQWLPRLK*RKRLFP Trigger: TGGGAAGAGCCGTTTCCTGCATTTAAGTCTTGGCAG...CCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTAGAGGCTTAACAATGTaGCTTTCTTCCCTGGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: CGTAFLAYWNHKQAHNGTRGLTM*LSSLVT Trigger: GGTGACCAGGGAAGAAAGGCACATTGTTAAGCCTCT...AGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR CCA 90 bp | GAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGTCTTCACTATCCCCGTaGTCACTACAAGGCTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: ECGTAFLAYWNHKQAHNGSSLSP*SLQGSN Trigger: GTTAGAGCCTTGTAGTGACCACGGGGATAGTGAAGA...CCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR TCA 90 bp | GGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGTCTCAGCATTCCCATTaGCTTGAAACAGCCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GMWNSFPCLLEPQTSTQWSQHSH*LETALV Trigger: AACAAGGGCTGTTTCAAGTCAATGGGAATGCTGAGA...CCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR TCA 90 bp | CAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTTCCAAAGGCGTCTTCTCTTTCTaGATGACTCTGGGCTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: QTPVASYVVSFSQLWLSKGVFSF*MTLGSP Trigger: AGGTGAGCCCAGAGTCATTCAGAAAGAGAAGACGCC...TTTGGAAAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235364.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCCGTTTCTCCTTCTATaGTTGGCTGTAACATCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CGTAFLAYWNHKQAHNGTPFLLL*LAVTSD Trigger: GTCAGATGTTACAGCCAATCATAGAAGGAGAAACGG...AGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR GCA 90 bp | GAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACAGGTGGAAGCTGTTaGAAGAGGAACCTCAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ECGTAFLAYWNHKQAHNGTGGSC*KRNLNF Trigger: AAAGTTGAGGTTCCTCTTGCAACAGCTTCCACCTGT...CCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR GCA 90 bp | GTCATCTTTCTGGGGATGCCTGTTAATCTTATATCTTCAGCCCATAGCTCCAAAGCAGCACCTCTGGCATaGCAGCTGACTTTTCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: VIFLGMPVNLISSAHSSKAAPLA*QLTFLH Trigger: GTGTAGAAAAGTCAGCTGGCATGCCAGAGGTGCTGC...TTTGGAGCTATGGGCTGAAGATATAAGATTAACAGGCATCCCCAGAAAGATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238059.2 |
||
| CDS-3UTR GCA 90 bp | GAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCTGACTCACAGTCTTCCTaGCAAGACTTAAATGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EQLSLPTGTTNKHTMGLSDSQSS*QDLNAG Trigger: TCCTGCATTTAAGTCTTGGCAGGAAGACTGTGAGTC...AGAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR GCA 90 bp | GAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGCGCTGTAGGAGGGCTTaGTATTTCTTTCCCTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ECGTAFLAYWNHKQAHNGRCRRA*YFFPFQ Trigger: TTGAAAGGGAAAGAAATAGCAAGCCCTCCTACAGCG...CCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR CCA 90 bp | GCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTTCCAAAGTTGTTCCAGTACGGAACCTCATTGTCTaGATGTCCTCCCTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASYVVSFSQLWLSKVVPVRNLIV*MSSLLQ Trigger: CTGCAGCAGGGAGGACATCCAGACAATGAGGTTCCG...TACTGGAACAACTTTGGAAAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR CCA 90 bp | GGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCAATGTGGAAGACATCTaGACCAAAAACAGCAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GTAFLAYWNHKQAHNGTLNVEDI*TKNSSQ Trigger: TTGGCTGCTGTTTTTGGTCCAGATGTCTTCCACATT...GAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAATGTGGAAGACATCTaGACCAAAAACAGCAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGSAGMWNSFPCLLEPQTNVEDI*TKNSSQ Trigger: TTGGCTGCTGTTTTTGGTCCAGATGTCTTCCACATT...TGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTACACGATCCTCCTTCTaGGCATTCCTTCCATTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CGTAFLAYWNHKQAHNGTTRSSF*AFLPFC Trigger: ACAAAATGGAAGGAATGCCCAGAAGGAGGATCGTGT...AGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAAATCTAAACTACGATaGGATAATACTGGAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGSAGMWNSFPCLLEPQTKSKLR*DNTGGQ Trigger: CTGCCCTCCAGTATTATCTCATCGTAGTTTAGATTT...TGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGTTTCTTGACCAACTaGTATGGTGTTCTGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGSAGMWNSFPCLLEPQTSFLTN*YGVLSS Trigger: AGAAGACAGAACACCATATCAGTTGGTCAAGAAACT...TGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTTTTGTCATTTTCTTaGTATCCTCAGGAAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CGTAFLAYWNHKQAHNGTLLSFS*YPQEGA Trigger: GGCACCTTCCTGAGGATATCAAGAAAATGACAAAAG...AGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR GCA 90 bp | AACGCTTCTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGGATGTCCTCCCTGCTaGAGCTCATCAAGTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: NASSNSRSILRSFFFSALGCPPC*SSSSGI Trigger: AATTCCACTTGATGAGCTGCAGCAGGGAGGACATCC...CAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTGAAGAAGCGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR GCA 90 bp | AGAGCCAAAACTTTTTGGCAGAGTGTTACTCCGAGGACGTGTCTGAGGCGCAAACTGCTCACAATTTCCTaGTCTTTCATATCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RAKTFWQSVTPRTCLRRKLLTIS*SFISST Trigger: TGTGGAAGATATGAAAGAGCAGGAAATTGTGAGCAG...TTTGCGCCTCAGACACGTCCTCGGAGTAACACTCTGCCAAAAAGTTTTGGCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR GCA 90 bp | GGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCGGAAGTTCTTCTATATaGTCCAGCTTTTCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GTAFLAYWNHKQAHNGTLGSSSI*SSFSSS Trigger: GGAAGATGAAAAGCTGGAGCATATAGAAGAACTTCC...GAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR GCA 90 bp | TACTTATTGCTCTACCATATCCCGATGTCATCTTTCTGGGGATGCCTGTTAATCTCAGTCATCCTTAACTaGAGCACCTCTGGCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YLLLYHIPMSSFWGCLLISVILN*STSGMP Trigger: TGGCATGCCAGAGGTGCTGCAGTTAAGGATGACTGA...GATTAACAGGCATCCCCAGAAAGATGACATCGGGATATGGTAGAGCAATAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238059.2 |
||
| CDS-3UTR GCA 90 bp | GAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCTAATCTGTATACACGCTaGTTCTCCTTGAACACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: EQLSLPTGTTNKHTMGLSNLYTR*FSLNTN Trigger: GTTGGTGTTCAAGGAGAAGCAGCGTGTATACAGATT...AGAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR GCA 90 bp | GGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCTTCTTCAGATCTAACTaGGCAATCTGTATACACGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTAFLAYWNHKQAHNGTLFFRSN*AICIHA Trigger: AGCGTGTATACAGATTGCGCAGTTAGATCTGAAGAA...GAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAATCATGTAGGAAACGTTaGCTTTGCCCAAAATCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: WRGSAGMWNSFPCLLEPQSCRKR*LCPKSK Trigger: TTTAGATTTTGGGCAAAGCCAACGTTTCCTACATGA...TTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAACTTGACCAACTGATATaGTGTTCTGTCTTCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: WRGSAGMWNSFPCLLEPQLDQLI*CSVFSF Trigger: AAAAGAGAAGACAGAACACCATATCAGTTGGTCAAG...TTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR TCA 90 bp | ATACTTATTGCTCTACCATATCCCGATGTCATCTTTCTGGGGATGCCTGTTAATCTCTGGCATGCCAGCTaGCTTTTCTACACCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILIALPYPDVIFLGMPVNLWHAS*LFYTFF Trigger: GAAGAAGGTGTAGAAAAGTCAGCTGGCATGCCAGAG...ATTAACAGGCATCCCCAGAAAGATGACATCGGGATATGGTAGAGCAATAAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238059.2 |
||
| CDS-3UTR TCA 90 bp | GGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGTCTCATCTTTTGAACTaGAGGATGACCTTCGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: GMWNSFPCLLEPQTSTQWSHLLN*RMTFEF Trigger: GAATTCGAAGGTCATCCTTCAGTTCAAAAGATGAGA...CCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCGAGCCAGTTTTTCTTaGTTTTCTTCAGCATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CGTAFLAYWNHKQAHNGTRASFS*FSSASD Trigger: ATCTGATGCTGAAGAAAATCAAGAAAAACTGGCTCG...AGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR GCA 90 bp | ACTAAATGCTACAGGTTCTTCATTATATTAACAGTGGTTGTAGCCCTGGCTACAGGCTCAGGGAGCTCCTaGAGGAAAAACCTAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TKCYRFFIILTVVVALATGSGSS*RKNLRR Trigger: TCTCCTTAGGTTTTTCCTGCAGGAGCTCCCTGAGCC...TGTAGCCAGGGCTACAACCACTGTTAATATAATGAAGAACCTGTAGCATTTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTGTTGTGCACCTATAATCCCAACTCTTCAAAAATCTCTGGCCAGCCAGTAACAGGTGGAAGCTGTTaGAAGAGGAACCTCAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVLCTYNPNSSKISGQPVTGGSC*KRNLNF Trigger: AAAGTTGAGGTTCCTCTTGCAACAGCTTCCACCTGT...TACTGGCTGGCCAGAGATTTTTGAAGAGTTGGGATTATAGGTGCACAACACTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR GCA 90 bp | GAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCTCTGCTCACAATTTCCTaGTCTTTCATATCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: EQLSLPTGTTNKHTMGLSLLTIS*SFISST Trigger: TGTGGAAGATATGAAAGAGCAGGAAATTGTGAGCAG...AGAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR GCA 90 bp | GAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCTGAATCCAGAATCAAGTaGGGCAATTTATCACTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EQLSLPTGTTNKHTMGLSESRIK*GNLSLS Trigger: TGACAGTGATAAATTGCCGCACTTGATTCTGGATTC...AGAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR GCA 90 bp | GAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGAGGAAACGTTGGCTTTaGCCAAAATCTAAACTACGA | + |
|
Preference number: 4 (lower is better) Translates to: ECGTAFLAYWNHKQAHNGRKRWL*PKSKLR Trigger: TCGTAGTTTAGATTTTGGGCAAAGCCAACGTTTCCT...CCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR CCA 90 bp | GAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTGTAATTAACAGGTaGAAGCTGTTGCAAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ECGTAFLAYWNHKQAHNGTVINR*KLLQEE Trigger: TTCCTCTTGCAACAGCTTCCACCTGTTAATTACAGT...CCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR CCA 90 bp | TACTTATTGCTCTACCATATCCCGATGTCATCTTTCTGGGGATGCCTGTTAATCTCTTCACTATCCCCGTaGTCACTACAAGGCTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: YLLLYHIPMSSFWGCLLISSLSP*SLQGSN Trigger: GTTAGAGCCTTGTAGTGACCACGGGGATAGTGAAGA...GATTAACAGGCATCCCCAGAAAGATGACATCGGGATATGGTAGAGCAATAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238059.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTCCGTTTCTCCTTCTATaGTTGGCTGTAACATCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLQTPVASYVVSFSQLWLPFLLL*LAVTSD Trigger: GTCAGATGTTACAGCCAATCATAGAAGGAGAAACGG...AAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTGAAGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235364.2 |
||
| CDS-3UTR GCA 90 bp | TGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTAGCAGCCAAAGAATTTaGAGACCAAATTTCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: WNSFPCLLEPQTSTQWDSSSQRI*RPNFFM Trigger: CATGAAGAAATTTGGTCTGCAAATTCTTTGGCTGCT...AGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR GCA 90 bp | CCCGATGTCATCTTTCTGGGGATGCCTGTTAATCTTATATCTTCAGCCCATAGCGGAAGTTCTTCTATATaGTCCAGCTTTTCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PDVIFLGMPVNLISSAHSGSSSI*SSFSSS Trigger: GGAAGATGAAAAGCTGGAGCATATAGAAGAACTTCC...GCTATGGGCTGAAGATATAAGATTAACAGGCATCCCCAGAAAGATGACATCGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238059.2 |
||
| CDS-3UTR CCA 90 bp | TGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCTGCAGCTCATCAAGTaGAATTCCAAATATTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WNSFPCLLEPQTSTQWDSLQLIK*NSKYFA Trigger: AGCAAAATATTTGGAATTCCACTTGATGAGCTGCAG...AGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR CCA 90 bp | GAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCTGATGTGATGCTACATTaGCTAAAAACCTACACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EQLSLPTGTTNKHTMGLSDVMLH*LKTYTE Trigger: TTCTGTGTAGGTTTTTAGCCAATGTAGCATCACATC...AGAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR CCA 90 bp | GGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGTTCTACACCTTCTTCTaGAAGTTCTTCTATATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GMWNSFPCLLEPQTSTQWFYTFF*KFFYML Trigger: GAGCATATAGAAGAACTTCCAGAAGAAGGTGTAGAA...CCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTTCCAATTCAGTGTTaGCATTCAAATCACGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: CGTAFLAYWNHKQAHNGTLPIQC*HSNHVS Trigger: AGATACGTGATTTGAATGCCAACACTGAATTGGAAG...AGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR CCA 90 bp | GTTGATAGAACGCTTCTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCTCTCGCCGTCCTCATaGTCTAGAGAAGAGCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VDRTLLQTPVASYVVSFSLSPSS*SREEPK Trigger: TTTTGGCTCTTCTCTAGACCATGAGGACGGCGAGAG...AGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTGAAGAAGCGTTCTATCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235364.2 |
||
| CDS-3UTR TCA 90 bp | CATTTTGTTGATAGAACGCTTCTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTCTTCTCTTTCTGAATaGCTCTGGGCTCACCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HFVDRTLLQTPVASYVVSSSLSE*LWAHLH Trigger: GTGAAGGTGAGCCCAGAGTCATTCAGAAAGAGAAGA...AGAAACTACGTAAGATGCTACGGGAGTTTGAAGAAGCGTTCTATCAACAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235364.2 |
||
| CDS-3UTR TCA 90 bp | GATAGAACGCTTCTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTTTTGTCATTTTCTTaGTATCCTCAGGAAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DRTLLQTPVASYVVSFSQLLSFS*YPQEGA Trigger: GGCACCTTCCTGAGGATATCAAGAAAATGACAAAAG...CTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTGAAGAAGCGTTCTATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000235364.2 |
||
| CDS-3UTR GCA 90 bp | GGGCATTCCTTCCATTTTGTTGATAGAACGCTTCTTCAAACTCCCGTAGCATCTAGCAGCCAAAGAATTTaGAGACCAAATTTCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: GHSFHFVDRTLLQTPVASSSQRI*RPNFFM Trigger: CATGAAGAAATTTGGTCTGCAAATTCTTTGGCTGCT...AGATGCTACGGGAGTTTGAAGAAGCGTTCTATCAACAAAATGGAAGGAATGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTTTCTACACCTTCTTCTaGAAGTTCTTCTATATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLQTPVASYVVSFSQLWLFYTFF*KFFYML Trigger: GAGCATATAGAAGAACTTCCAGAAGAAGGTGTAGAA...AAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTGAAGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR CCA 90 bp | TTTGTTGATAGAACGCTTCTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTAGAGCCAAAACTTTTTaGCAGAGTGTTACTCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FVDRTLLQTPVASYVVSFRAKTF*QSVTPR Trigger: CCTCGGAGTAACACTCTGCCAAAAAGTTTTGGCTCT...AAAAGAAACTACGTAAGATGCTACGGGAGTTTGAAGAAGCGTTCTATCAACAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000235364.2 |
||
| 3UTR CAA 72 bp | AGAACTTCAAGAAGTCTAAGCTTGGCTTTGATTCTCTaGTATTCCTTATATTCCTCAAGCACCGGAACACGA | + |
|
Preference number: 4 (lower is better) Translates to: RTSRSLSLALIL*YSLYSSSTGTR Trigger: TCGTGTTCCGGTGCTTGAGGAATATAAGGAATACAAGAGAATCAAAGCCAAGCTTAGACTTCTTGAAGTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR GCA 90 bp | ACTAAATGCTACAGGTTCTTCATTATATTAACAGTGGTTGTAGCCCTGGCTACAGGAAGTTCTTCTATATaGTCCAGCTTTTCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TKCYRFFIILTVVVALATGSSSI*SSFSSS Trigger: GGAAGATGAAAAGCTGGAGCATATAGAAGAACTTCC...TGTAGCCAGGGCTACAACCACTGTTAATATAATGAAGAACCTGTAGCATTTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR CCA 90 bp | GTTGATAGAACGCTTCTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCTGCAGCTCATCAAGTaGAATTCCAAATATTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VDRTLLQTPVASYVVSFSLQLIK*NSKYFA Trigger: AGCAAAATATTTGGAATTCCACTTGATGAGCTGCAG...AGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTGAAGAAGCGTTCTATCAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR CCA 90 bp | GTTGATAGAACGCTTCTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTGATGTGATGCTACATTaGCTAAAAACCTACACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VDRTLLQTPVASYVVSFSDVMLH*LKTYTE Trigger: TTCTGTGTAGGTTTTTAGCCAATGTAGCATCACATC...AGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTGAAGAAGCGTTCTATCAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR CCA 90 bp | GAATCCAGAATCAAGTGCGGCAATTTATCACTGTCACATAATAAATATTCCTTCTTCTACACCTTCTTCTaGAAGTTCTTCTATATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ESRIKCGNLSLSHNKYSFFYTFF*KFFYML Trigger: GAGCATATAGAAGAACTTCCAGAAGAAGGTGTAGAA...GAAGGAATATTTATTATGTGACAGTGATAAATTGCCGCACTTGATTCTGGATTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236786.2 ENSMUST00000238059.2 |
||
| CDS TCA 90 bp | GGGCTCAGGGAGCTCCTGCAGGAAAAACCTAAGGAGACTAATGGCTaGGGGGACGTCCGCTTCCTTAACCAAGTCCACCTCTTCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: GLRELLQEKPKETNG*GDVRFLNQVHLFST Trigger: AGTGGAGAAGAGGTGGACTTGGTTAAGGAAGCGGACGTCCCCTCAGCCATTAGTCTCCTTAGGTTTTTCCTGCAGGAGCTCCCTGAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS TCA 90 bp | CCAGACCTCCATGTTCCTCAATATAGTCCACAACGTGGCGGACTATaGACGGAACCTCATTGTCTGGATGTCCTCCCTGCTGCAGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PDLHVPQYSPQRGGL*TEPHCLDVLPAAAH Trigger: ATGAGCTGCAGCAGGGAGGACATCCAGACAATGAGGTTCCGTTCATAGTCCGCCACGTTGTGGACTATATTGAGGAACATGGAGGTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR CAA 90 bp | TGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTATGAACGGAACCTCATaGTCTGGATGTCCTCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WNSFPCLLEPQTSTQWDSMNGTS*SGCPPC Trigger: GCAGGGAGGACATCCAGACAATGAGGTTCCGTTCAT...AGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR CAA 90 bp | GAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGGACTTGAAACAGCCCTaGTTGCTCCAGACCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: ECGTAFLAYWNHKQAHNGDLKQP*LLQTSM Trigger: CATGGAGGTCTGGAGCAACAAGGGCTGTTTCAAGTC...CCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR CAA 90 bp | GGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGACACGCTGCTTCTCCTaGAACACCAACACTCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: GMWNSFPCLLEPQTSTQWTRCFS*NTNTLT Trigger: GGTCAGAGTGTTGGTGTTCAAGGAGAAGCAGCGTGT...CCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTAGCAAGATCGGAGTaGCAGTTACTCAAGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CGTAFLAYWNHKQAHNGTLARSE*QLLKEG Trigger: CCCTTCCTTGAGTAACTGCAACTCCGATCTTGCTAG...AGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCATTCCCATTGACTaGAAACAGCCCTTGTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RGSAGMWNSFPCLLEPQTSIPID*KQPLLL Trigger: GAGCAACAAGGGCTGTTTCAAGTCAATGGGAATGCT...TGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR CAA 90 bp | TGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCACCGGCCTTCCGTGTaGACTTTCATAGTAAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WNSFPCLLEPQTSTQWDSHRPSV*TFIVKQ Trigger: CTGCTTTACTATGAAAGTCAACACGGAAGGCCGGTG...AGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS GCA 90 bp | TGGCGGACTATGAACGGAACCTCATTGTCTGGATGTCCTCCCTGCTaGAGCTCATCAAGTGGAATTCCAAATATTTTGCTAGCAAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: WRTMNGTSLSGCPPC*SSSSGIPNILLARS Trigger: CGATCTTGCTAGCAAAATATTTGGAATTCCACTTGATGAGCTGCAGCAGGGAGGACATCCAGACAATGAGGTTCCGTTCATAGTCCGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS GCA 90 bp | ACGTGGCGGACTATGAACGGAACCTCATTGTCTGGATGTCCTCCCTaGTGCAGCTCATCAAGTGGAATTCCAAATATTTTGCTAGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TWRTMNGTSLSGCPP*CSSSSGIPNILLAR Trigger: TCTTGCTAGCAAAATATTTGGAATTCCACTTGATGAGCTGCAGCAGGGAGGACATCCAGACAATGAGGTTCCGTTCATAGTCCGCCACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS GCA 90 bp | GCTGTAACACTGTCTGAGTCCAGAAGGTTTTCAGTCATCCTTAACTaGAGCACCTCTGGCATGCCAGCTGACTTTTCTACACCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AVTLSESRRFSVILN*STSGMPADFSTPSS Trigger: AGAAGAAGGTGTAGAAAAGTCAGCTGGCATGCCAGAGGTGCTGCAGTTAAGGATGACTGAAAACCTTCTGGACTCAGACAGTGTTACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 ENSMUST00000238059.2 |
||
| CDS-3UTR CAA 90 bp | ACGCTTCTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGATGAACGGAACCTCATaGTCTGGATGTCCTCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TLLQTPVASYVVSFSQLWMNGTS*SGCPPC Trigger: GCAGGGAGGACATCCAGACAATGAGGTTCCGTTCAT...CCAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTGAAGAAGCGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR CAA 90 bp | GAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCTAACAGGTGGAAGCTGTaGCAAGAGGAACCTCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: EQLSLPTGTTNKHTMGLSNRWKL*QEEPQL Trigger: AAGTTGAGGTTCCTCTTGCAACAGCTTCCACCTGTT...AGAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAAGAGCCAAAACTTTTaGGCAGAGTGTTACTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: RGSAGMWNSFPCLLEPQTKSQNF*AECYSE Trigger: CTCGGAGTAACACTCTGCCAAAAAGTTTTGGCTCTT...TGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS CCA 90 bp | CGGAACCTCATTGTCTGGATGTCCTCCCTGCTGCAGCTCATCAAGTaGAATTCCAAATATTTTGCTAGCAAGATCGGAGTTGCAGTTACT | + |
|
Preference number: 5 (lower is better) Translates to: RNLIVWMSSLLQLIK*NSKYFASKIGVAVT Trigger: AGTAACTGCAACTCCGATCTTGCTAGCAAAATATTTGGAATTCCACTTGATGAGCTGCAGCAGGGAGGACATCCAGACAATGAGGTTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS CCA 90 bp | AATATAGTCCACAACGTGGCGGACTATGAACGGAACCTCATTGTCTaGATGTCCTCCCTGCTGCAGCTCATCAAGTGGAATTCCAAATAT | + |
|
Preference number: 5 (lower is better) Translates to: NIVHNVADYERNLIV*MSSLLQLIKWNSKY Trigger: ATATTTGGAATTCCACTTGATGAGCTGCAGCAGGGAGGACATCCAGACAATGAGGTTCCGTTCATAGTCCGCCACGTTGTGGACTATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAATCTTTCCCTTTCAAATaGCTCCTCGAATTGTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: WRGSAGMWNSFPCLLEPQSFPFK*LLELSD Trigger: ATCAGACAATTCGAGGAGCAATTTGAAAGGGAAAGA...TTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR CAA 90 bp | CTAAGTGTGGAGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGATCTTTTGTCATTTTCTaGATATCCTCAGGAAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSVERICGNVEQLSLPTGSFVIF*ISSGRC Trigger: GCACCTTCCTGAGGATATCAAGAAAATGACAAAAGA...TCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCTCCACACTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR CAA 90 bp | GGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCCCGAGCCAGTTTTTCTaGATTTTCTTCAGCATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GTAFLAYWNHKQAHNGTLPSQFF*IFFSIR Trigger: TCTGATGCTGAAGAAAATCAAGAAAAACTGGCTCGG...GAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR CAA 90 bp | CAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTTCCAAACTAGCAAGATCGGAGTaGCAGTTACTCAAGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QTPVASYVVSFSQLWLSKLARSE*QLLKEG Trigger: CCCTTCCTTGAGTAACTGCAACTCCGATCTTGCTAG...TTTGGAAAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR CAA 90 bp | CTAAGTGTGGAGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGATTCAAATCACGTATCTaGCTACTAGAATCCAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: LSVERICGNVEQLSLPTGFKSRI*LLESRI Trigger: GATTCTGGATTCTAGTAGCAAGATACGTGATTTGAA...TCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCTCCACACTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR CAA 90 bp | GGAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCACTTCCAATTCAGTGTaGGCATTCAAATCACGTATC | + |
|
Preference number: 5 (lower is better) Translates to: GTAFLAYWNHKQAHNGTLTSNSV*AFKSRI Trigger: GATACGTGATTTGAATGCCAACACTGAATTGGAAGT...GAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR CAA 90 bp | GAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCTGGCATTCCTTCCATTTaGTTGATAGAACGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EQLSLPTGTTNKHTMGLSGIPSI*LIERFF Trigger: GAAGAAGCGTTCTATCAACAAAATGGAAGGAATGCC...AGAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGAGGATCTGCGGGAATGTGGAACAGCTTTCCTTGCCTACTGGAACCACAATCAAGAAGTCTAAGCTaGGCTTTGATTCTCTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: WRGSAGMWNSFPCLLEPQSRSLS*ALILLY Trigger: ATACAAGAGAATCAAAGCCAAGCTTAGACTTCTTGA...TTGTGGTTCCAGTAGGCAAGGAAAGCTGTTCCACATTCCCGCAGATCCTCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR CAA 90 bp | CGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTTCCAAAGTTGTTCCACCCGGCCTTCCGTGTaGACTTTCATAGTAAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RSILRSFFFSALAFQSCSTRPSV*TFIVKQ Trigger: CTGCTTTACTATGAAAGTCAACACGGAAGGCCGGGT...GGAACAACTTTGGAAAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235364.2 |
||
| CDS GCA 90 bp | AGTCCAGAAGGTTTTCAGTCATCCTTAACTGCAGCACCTCTGGCATaGCAGCTGACTTTTCTACACCTTCTTCTGGAAGTTCTTCTATAT | + |
|
Preference number: 5 (lower is better) Translates to: SPEGFQSSLTAAPLA*QLTFLHLLLEVLLY Trigger: ATATAGAAGAACTTCCAGAAGAAGGTGTAGAAAAGTCAGCTGGCATGCCAGAGGTGCTGCAGTTAAGGATGACTGAAAACCTTCTGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 ENSMUST00000238059.2 |
||
| CDS-3UTR CAA 90 bp | CGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTTCCAAAGTTGTTCCAGCATTCCCATTGACTaGAAACAGCCCTTGTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RSILRSFFFSALAFQSCSSIPID*KQPLLL Trigger: GAGCAACAAGGGCTGTTTCAAGTCAATGGGAATGCT...GGAACAACTTTGGAAAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR CAA 90 bp | CTTCTTCAAACTCCCGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTAACAGGTGGAAGCTGTaGCAAGAGGAACCTCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: LLQTPVASYVVSFSQLWLNRWKL*QEEPQL Trigger: AAGTTGAGGTTCCTCTTGCAACAGCTTCCACCTGTT...AAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACGGGAGTTTGAAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236786.2 |
||
| CDS-3UTR CAA 90 bp | CGTAGCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTTCCAAAGTTGTTCCAAGAGCCAAAACTTTTaGGCAGAGTGTTACTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSILRSFFFSALAFQSCSKSQNF*AECYSE Trigger: CTCGGAGTAACACTCTGCCAAAAAGTTTTGGCTCTT...GGAACAACTTTGGAAAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATGCTACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000235364.2 |
||
| CDS-3UTR CAA 90 bp | GAACAGCTTTCCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCTAGTCTAAGCTTGGCTTaGATTCTCTTGTATTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: EQLSLPTGTTNKHTMGLSSLSLA*ILLYSL Trigger: TAAGGAATACAAGAGAATCAAAGCCAAGCTTAGACT...AGAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAGGAAAGCTGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS-3UTR CAA 90 bp | GCATCTTACGTAGTTTCTTTTTCTCAGCTCTGGCTTTCCAAAGTTGTTCCAGTATCTTTTGTCATTTTCTaGATATCCTCAGGAAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ASYVVSFSQLWLSKVVPVSFVIF*ISSGRC Trigger: GCACCTTCCTGAGGATATCAAGAAAATGACAAAAGA...TACTGGAACAACTTTGGAAAGCCAGAGCTGAGAAAAAGAAACTACGTAAGATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000235364.2 |
||
| CDS TCA 90 bp | GGACCAAAAACAGCAGCCAAAGAATTTGCAGACCAAATTTCTTCATaGTGTGATGCTACATTGGCTAAAAACCTACACAGAAACTTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: GPKTAAKEFADQISS*CDATLAKNLHRNFN Trigger: GTTAAAGTTTCTGTGTAGGTTTTTAGCCAATGTAGCATCACATCATGAAGAAATTTGGTCTGCAAATTCTTTGGCTGCTGTTTTTGGTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS TCA 72 bp | TGTGCCGTTTCTCCTTCTATGATTGGCTGTAACATCTaGCCCCGGCGCTTCGTGGAAGGAGAACCCGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: CAVSPSMIGCNI*PRRFVEGEPGL Trigger: AAGGCCGGGTTCTCCTTCCACGAAGCGCCGGGGTCAGATGTTACAGCCAATCATAGAAGGAGAAACGGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235364.2 |
||
| CDS TCA 72 bp | GAGCTCCTGCAGGAAAAACCTAAGGAGACTAATGGCTaGGGGGACGTCCGCTTCCTTAACCAAGTCCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: ELLQEKPKETNG*GDVRFLNQVHL Trigger: GAGGTGGACTTGGTTAAGGAAGCGGACGTCCCCTCAGCCATTAGTCTCCTTAGGTTTTTCCTGCAGGAGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS CCA 72 bp | CACAACGTGGCGGACTATGAACGGAACCTCATTGTCTaGATGTCCTCCCTGCTGCAGCTCATCAAGTGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: HNVADYERNLIV*MSSLLQLIKWN Trigger: ATTCCACTTGATGAGCTGCAGCAGGGAGGACATCCAGACAATGAGGTTCCGTTCATAGTCCGCCACGTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS GCA 72 bp | TTAACCAAGTCCACCTCTTCTCCACTGTCGTATCTCTaGCGAAGCCACTCCACTGTCTCAGCATTCCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: LTKSTSSPLSYL*RSHSTVSAFPL Trigger: CAATGGGAATGCTGAGACAGTGGAGTGGCTTCGGCAGAGATACGACAGTGGAGAAGAGGTGGACTTGGTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS CCA 72 bp | TGCCTCCTCTCAGGACAGCCATCTTCACTATCCCCGTaGTCACTACAAGGCTCTAACAGTATACCTACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: CLLSGQPSSLSP*SLQGSNSIPTD Trigger: GTCTGTAGGTATACTGTTAGAGCCTTGTAGTGACCACGGGGATAGTGAAGATGGCTGTCCTGAGAGGAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238059.2 |
||
| CDS TCA 72 bp | CATGTTCCTCAATATAGTCCACAACGTGGCGGACTATaGACGGAACCTCATTGTCTGGATGTCCTCCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: HVPQYSPQRGGL*TEPHCLDVLPA Trigger: AGCAGGGAGGACATCCAGACAATGAGGTTCCGTTCATAGTCCGCCACGTTGTGGACTATATTGAGGAACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS CAA 90 bp | GTATCTCTGCCGAAGCCACTCCACTGTCTCAGCATTCCCATTGACTaGAAACAGCCCTTGTTGCTCCAGACCTCCATGTTCCTCAATATA | + |
|
Preference number: 6 (lower is better) Translates to: VSLPKPLHCLSIPID*KQPLLLQTSMFLNI Trigger: TATATTGAGGAACATGGAGGTCTGGAGCAACAAGGGCTGTTTCAAGTCAATGGGAATGCTGAGACAGTGGAGTGGCTTCGGCAGAGATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS GCA 72 bp | CTGTCTGAGTCCAGAAGGTTTTCAGTCATCCTTAACTaGAGCACCTCTGGCATGCCAGCTGACTTTTCTACA | + |
|
Preference number: 6 (lower is better) Translates to: LSESRRFSVILN*STSGMPADFST Trigger: TGTAGAAAAGTCAGCTGGCATGCCAGAGGTGCTGCAGTTAAGGATGACTGAAAACCTTCTGGACTCAGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 ENSMUST00000238059.2 |
||
| CDS CAA 72 bp | GTTCCAGTAATTCAGGCACAGAAGCTGCCCGGGTACTaGATAAGCAGAGATCCCGAGCCAGTTTTTCTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: VPVIQAQKLPGY*ISRDPEPVFLD Trigger: ATCAAGAAAAACTGGCTCGGGATCTCTGCTTATCAAGTACCCGGGCAGCTTCTGTGCCTGAATTACTGGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040506.8 |
||
| CDS CAA 90 bp | AATGCAGGAAACGGCTCCTCCCCAGCTCTCTGCAGATGCATTGTTTaGAAATCAATGAGGGGGAAAGTGATAAGGCATAACGCTTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: NAGNGSSPALCRCIV*KSMRGKVIRHNASH Trigger: ATGGGAAGCGTTATGCCTTATCACTTTCCCCCTCATTGATTTCAAAACAATGCATCTGCAGAGAGCTGGGGAGGAGCCGTTTCCTGCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238047.2 |
||
| CDS GCA 72 bp | GGTTTTCAGTCATCCTTAACTGCAGCACCTCTGGCATaGCAGCTGACTTTTCTACACCTTCTTCTGGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: GFQSSLTAAPLA*QLTFLHLLLEV Trigger: AACTTCCAGAAGAAGGTGTAGAAAAGTCAGCTGGCATGCCAGAGGTGCTGCAGTTAAGGATGACTGAAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 ENSMUST00000238059.2 |
||
| CDS CAA 72 bp | TGTCTCAGCATTCCCATTGACTTGAAACAGCCCTTGTaGCTCCAGACCTCCATGTTCCTCAATATAGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: CLSIPIDLKQPL*LQTSMFLNIVH Trigger: GTGGACTATATTGAGGAACATGGAGGTCTGGAGCAACAAGGGCTGTTTCAAGTCAATGGGAATGCTGAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS CAA 72 bp | CACTGTCTCAGCATTCCCATTGACTTGAAACAGCCCTaGTTGCTCCAGACCTCCATGTTCCTCAATATAGTC | + |
|
Preference number: 6 (lower is better) Translates to: HCLSIPIDLKQP*LLQTSMFLNIV Trigger: GACTATATTGAGGAACATGGAGGTCTGGAGCAACAAGGGCTGTTTCAAGTCAATGGGAATGCTGAGACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS CAA 72 bp | AACGGCTCCTCCCCAGCTCTCTGCAGATGCATTGTTTaGAAATCAATGAGGGGGAAAGTGATAAGGCATAAC | + |
|
Preference number: 6 (lower is better) Translates to: NGSSPALCRCIV*KSMRGKVIRHN Trigger: GTTATGCCTTATCACTTTCCCCCTCATTGATTTCAAAACAATGCATCTGCAGAGAGCTGGGGAGGAGCCGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238047.2 |
||
| CDS CAA 72 bp | AGTGGAATTCCAAATATTTTGCTAGCAAGATCGGAGTaGCAGTTACTCAAGGAAGGGGAGGAGCTCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SGIPNILLARSE*QLLKEGEELFL Trigger: GAGGAAGAGCTCCTCCCCTTCCTTGAGTAACTGCAACTCCGATCTTGCTAGCAAAATATTTGGAATTCCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS GCA 72 bp | ACTATGAACGGAACCTCATTGTCTGGATGTCCTCCCTaGTGCAGCTCATCAAGTGGAATTCCAAATATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TMNGTSLSGCPP*CSSSSGIPNIL Trigger: CAAAATATTTGGAATTCCACTTGATGAGCTGCAGCAGGGAGGACATCCAGACAATGAGGTTCCGTTCATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS CCA 72 bp | ATTGTCTGGATGTCCTCCCTGCTGCAGCTCATCAAGTaGAATTCCAAATATTTTGCTAGCAAGATCGGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: IVWMSSLLQLIK*NSKYFASKIGV Trigger: AACTCCGATCTTGCTAGCAAAATATTTGGAATTCCACTTGATGAGCTGCAGCAGGGAGGACATCCAGACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||
| CDS CCA 72 bp | TTGCAGACCAAATTTCTTCATGATGTGATGCTACATTaGCTAAAAACCTACACAGAAACTTTAACAAACTGT | + |
|
Preference number: 6 (lower is better) Translates to: LQTKFLHDVMLH*LKTYTETLTNC Trigger: ACAGTTTGTTAAAGTTTCTGTGTAGGTTTTTAGCCAATGTAGCATCACATCATGAAGAAATTTGGTCTGCAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040506.8 ENSMUST00000236786.2 |
||