Pregenerated sensors for FAM13A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037709Ensembl transcript IDs: ENSMUST00000089860.12, ENSMUST00000173193.2
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGTGGGGTCCAGGGTGGGCACGGACCTCCACAACAAGCAGGCTTTaGAAGGGAAGTCCTGAGCTTGTGCCTGTCACAGTTTTAGAATGG | + |
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Preference number: 1 (lower is better) Translates to: WWGPGWARTSTTSRL*KGSPELVPVTVLEW Trigger: CCATTCTAAAACTGTGACAGGCACAAGCTCAGGACTTCCCTTGCAAAGCCTGCTTGTTGTGGAGGTCCGTGCCCACCCTGGACCCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR GCA 90 bp | CTCTCGAAGGTGACTCTCCAAACAGAACAGGGTCTCTCTGCTGTCTaGCCAGCCTACAGTTCAGTCTCTCAGACACAGGGCTGTTGCACA | + |
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Preference number: 1 (lower is better) Translates to: LSKVTLQTEQGLSAV*PAYSSVSQTQGCCT Trigger: TGTGCAACAGCCCTGTGTCTGAGAGACTGAACTGTAGGCTGGGCAGACAGCAGAGAGACCCTGTTCTGTTTGGAGAGTCACCTTCGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR TCA 90 bp | GTGGGCACGGACCTCCACAACAAGCAGGCTTTGCAAGGGAAGTCCTaGGCTTGTGCCTGTCACAGTTTTAGAATGGCCTCATGTTTCTCA | + |
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Preference number: 1 (lower is better) Translates to: VGTDLHNKQALQGKS*ACACHSFRMASCFS Trigger: TGAGAAACATGAGGCCATTCTAAAACTGTGACAGGCACAAGCTCAGGACTTCCCTTGCAAAGCCTGCTTGTTGTGGAGGTCCGTGCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR CCA 90 bp | GCCTCCTTCTACCTGAGAGCTAACAGGGAAATGGATTTGTCAGAGTaGATAAGCGCAGCTCGGGAAATGGCCAAGGCAGCAAATAATGTG | + |
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Preference number: 1 (lower is better) Translates to: ASFYLRANREMDLSE*ISAAREMAKAANNV Trigger: CACATTATTTGCTGCCTTGGCCATTTCCCGAGCTGCGCTTATCCACTCTGACAAATCCATTTCCCTGTTAGCTCTCAGGTAGAAGGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR TCA 90 bp | GTACAGTTTTCCATTCTTCTCATTAACATTGTGCCCTCTCGAAGGTaGCTCTCCAAACAGAACAGGGTCTCTCTGCTGTCTGCCCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: VQFSILLINIVPSRR*LSKQNRVSLLSAQP Trigger: AGGCTGGGCAGACAGCAGAGAGACCCTGTTCTGTTTGGAGAGTCACCTTCGAGAGGGCACAATGTTAATGAGAAGAATGGAAAACTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR TCA 90 bp | ATGGAAACCAATTTTCCCCACATTTCCTGCAGAGCCAGAAACCGCTaGGTAATATGCCTTCCGAGAAGATCTGGCATAAACACAGCTCCC | + |
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Preference number: 1 (lower is better) Translates to: METNFPHISCRARNR*VICLPRRSGINTAP Trigger: GGGAGCTGTGTTTATGCCAGATCTTCTCGGAAGGCATATTACTCAGCGGTTTCTGGCTCTGCAGGAAATGTGGGGAAAATTGGTTTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR CCA 90 bp | CTTTGCAAGGGAAGTCCTGAGCTTGTGCCTGTCACAGTTTTAGAATaGCCTCATGTTTCTCAGTTGTCAGGGAAGAACAGGTTATCTGCC | + |
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Preference number: 1 (lower is better) Translates to: LCKGSPELVPVTVLE*PHVSQLSGKNRLSA Trigger: GGCAGATAACCTGTTCTTCCCTGACAACTGAGAAACATGAGGCCATTCTAAAACTGTGACAGGCACAAGCTCAGGACTTCCCTTGCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR GCA 90 bp | ATCACAGAGTCAAGCTTACTCTTACATAACCCTCAGCACTTTTGTTaGTATGTGTTAATATATATGCACACTCCCAAGAGCCCAAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: ITESSLLLHNPQHFC*YVLIYMHTPKSPKK Trigger: TTTCTTTGGGCTCTTGGGAGTGTGCATATATATTAACACATAGCAACAAAAGTGCTGAGGGTTATGTAAGAGTAAGCTTGACTCTGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR CCA 90 bp | TCTCTCTGCTGTCTGCCCAGCCTACAGTTCAGTCTCTCAGACACAGGGCTGTTGTGGTCAACCATGTGGTaGGGTCCAGGGTGGGCACGG | + |
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Preference number: 2 (lower is better) Translates to: SLCCLPSLQFSLSDTGLLWSTMW*GPGWAR Trigger: CCGTGCCCACCCTGGACCCCACCACATGGTTGACCA...CAACAGCCCTGTGTCTGAGAGACTGAACTGTAGGCTGGGCAGACAGCAGAGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR CCA 90 bp | TCTCTCTGCTGTCTGCCCAGCCTACAGTTCAGTCTCTCAGACACAGGGCTGTTGACATGGTCAACCATGTaGTGGGGTCCAGGGTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: SLCCLPSLQFSLSDTGLLTWSTM*WGPGWA Trigger: TGCCCACCCTGGACCCCACCACATGGTTGACCATGT...CAACAGCCCTGTGTCTGAGAGACTGAACTGTAGGCTGGGCAGACAGCAGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR CCA 90 bp | AGGTTCAGAGAGCAGAGCCAGCCTGCAAATGGCTTTTTCCGCTGCGTAGGTGTTGCGCAGCTCGGGAAATaGCCAAGGCAGCAAATAATG | + |
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Preference number: 2 (lower is better) Translates to: RFREQSQPANGFFRCVGVAQLGK*PRQQIM Trigger: CATTATTTGCTGCCTTGGCCATTTCCCGAGCTGCGC...AACACCTACGCAGCGGAAAAAGCCATTTGCAGGCTGGCTCTGCTCTCTGAACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR TCA 90 bp | TCGAAGGTGACTCTCCAAACAGAACAGGGTCTCTCTGCTGTCTGCCCAGCCTACGTAAGTTTAGGAGACTaGTACAGACTCCCTCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SKVTLQTEQGLSAVCPAYVSLGD*YRLPLS Trigger: GGAGAGAGGGAGTCTGTATCAGTCTCCTAAACTTAC...GTAGGCTGGGCAGACAGCAGAGAGACCCTGTTCTGTTTGGAGAGTCACCTTCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR TCA 90 bp | AGGTTCAGAGAGCAGAGCCAGCCTGCAAATGGCTTTTTCCGCTGCGTAGGTGTTGTGCTGAAAATCATCTaGCTGGAGACCCCCAAACCT | + |
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Preference number: 2 (lower is better) Translates to: RFREQSQPANGFFRCVGVVLKII*LETPKP Trigger: AGGTTTGGGGGTCTCCAGTCAGATGATTTTCAGCAC...AACACCTACGCAGCGGAAAAAGCCATTTGCAGGCTGGCTCTGCTCTCTGAACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR TCA 90 bp | TACCTGAGAGCTAACAGGGAAATGGATTTGTCAGAGTGGATAAGCGCAGCTCGGTTGCAAGGGAAGTCCTaGGCTTGTGCCTGTCACAGT | + |
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Preference number: 2 (lower is better) Translates to: YLRANREMDLSEWISAARLQGKS*ACACHS Trigger: ACTGTGACAGGCACAAGCTCAGGACTTCCCTTGCAA...CCGAGCTGCGCTTATCCACTCTGACAAATCCATTTCCCTGTTAGCTCTCAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR GCA 90 bp | GTTTGTGCGAGGCCAATTAAGATGCTGCCTCTAGTGCTAGGAGATGAAGAGCTGAGGCAGGGGATTGCCTaGTTTGTGAGTACAGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: VCARPIKMLPLVLGDEELRQGIA*FVSTAP Trigger: TGGAGCTGTACTCACAAAGCAGGCAATCCCCTGCCT...CAGCTCTTCATCTCCTAGCACTAGAGGCAGCATCTTAATTGGCCTCGCACAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR GCA 90 bp | AGGTTCAGAGAGCAGAGCCAGCCTGCAAATGGCTTTTTCCGCTGCGTAGGTGTTACAACAAGCAGGCTTTaGAAGGGAAGTCCTGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: RFREQSQPANGFFRCVGVTTSRL*KGSPEL Trigger: AAGCTCAGGACTTCCCTTGCAAAGCCTGCTTGTTGT...AACACCTACGCAGCGGAAAAAGCCATTTGCAGGCTGGCTCTGCTCTCTGAACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR GCA 90 bp | AGAACACATCACAGGAATGACAGCAGGCACACAGAAGAGATGAATAATGGGGAGCCGCCACTGGATGGATaGAGCCTCCTTCTACCTGAG | + |
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Preference number: 2 (lower is better) Translates to: RTHHRNDSRHTEEMNNGEPPLDG*SLLLPE Trigger: CTCAGGTAGAAGGAGGCTGCATCCATCCAGTGGCGG...CTCCCCATTATTCATCTCTTCTGTGTGCCTGCTGTCATTCCTGTGATGTGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR GCA 90 bp | GTTTGTGCGAGGCCAATTAAGATGCTGCCTCTAGTGCTAGGAGATGAAGAGCTGCAGACACAGGGCTGTTaGACAGCTGCAAAACCAAGC | + |
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Preference number: 2 (lower is better) Translates to: VCARPIKMLPLVLGDEELQTQGC*TAAKPS Trigger: GCTTGGTTTTGCAGCTGTGCAACAGCCCTGTGTCTG...CAGCTCTTCATCTCCTAGCACTAGAGGCAGCATCTTAATTGGCCTCGCACAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR GCA 90 bp | GGTTCTAATGGTCCTCGCCTAGACAAGTCAGGTTCAGAGAGCAGAGCCAGCCTGAGCTGCAGAGACAGTTaGCATGGAAACCAATTTTCC | + |
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Preference number: 2 (lower is better) Translates to: GSNGPRLDKSGSESRASLSCRDS*HGNQFS Trigger: GGAAAATTGGTTTCCATGGCAACTGTCTCTGCAGCT...CAGGCTGGCTCTGCTCTCTGAACCTGACTTGTCTAGGCGAGGACCATTAGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR GCA 90 bp | TTAGTCAGCCCACAGTGCTCTAAGACAGTGTTGAGTATACCAGCAGGAACTGGTTCAGAGGCAGGGGATTaGCTGCTTTGTGAGTACAGC | + |
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Preference number: 2 (lower is better) Translates to: LVSPQCSKTVLSIPAGTGSEAGD*LLCEYS Trigger: GCTGTACTCACAAAGCAGGCAATCCCCTGCCTCTGA...ACCAGTTCCTGCTGGTATACTCAACACTGTCTTAGAGCACTGTGGGCTGACTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR CAA 90 bp | TCCTCAGTGTACACAGGTATGAGGCAGGGACTTAAAGTCTGTCAGTaGAGAGATCTAGTCAATGAAATGACTGCCCCGCCACTGGATGGA | + |
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Preference number: 2 (lower is better) Translates to: SSVYTGMRQGLKVCQ*RDLVNEMTAPPLDG Trigger: TCCATCCAGTGGCGGGGCAGTCATTTCATTGACTAGATCTCTCAACTGACAGACTTTAAGTCCCTGCCTCATACCTGTGTACACTGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR TCA 90 bp | AGAACACATCACAGGAATGACAGCAGGCACACAGAAGAGATGAATAATGGGGAGCGCTGCTCATGTCAGTaGAGTTCCTACTGCAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: RTHHRNDSRHTEEMNNGERCSCQ*SSYCSV Trigger: CACACTGCAGTAGGAACTTCACTGACATGAGCAGCG...CTCCCCATTATTCATCTCTTCTGTGTGCCTGCTGTCATTCCTGTGATGTGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR TCA 90 bp | GTTTGTGCGAGGCCAATTAAGATGCTGCCTCTAGTGCTAGGAGATGAAGAGCTGGTGCAGTCAGTGTCTTaGAGAGTTTTCAGGCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: VCARPIKMLPLVLGDEELVQSVS*RVFRLF Trigger: GAAGAGCCTGAAAACTCTTCAAGACACTGACTGCAC...CAGCTCTTCATCTCCTAGCACTAGAGGCAGCATCTTAATTGGCCTCGCACAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR TCA 90 bp | TTAGTCAGCCCACAGTGCTCTAAGACAGTGTTGAGTATACCAGCAGGAACTGGTGGCGGGCGTGGTAGATaGAAAGAAAGAACACATCAC | + |
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Preference number: 2 (lower is better) Translates to: LVSPQCSKTVLSIPAGTGGGRGR*KERTHH Trigger: GTGATGTGTTCTTTCTTTTCATCTACCACGCCCGCC...ACCAGTTCCTGCTGGTATACTCAACACTGTCTTAGAGCACTGTGGGCTGACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR CCA 90 bp | TTAGTCAGCCCACAGTGCTCTAAGACAGTGTTGAGTATACCAGCAGGAACTGGTCCTTCCGAGAAGATCTaGCATAAACACAGCTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: LVSPQCSKTVLSIPAGTGPSEKI*HKHSSH Trigger: GTGGGAGCTGTGTTTATGCCAGATCTTCTCGGAAGG...ACCAGTTCCTGCTGGTATACTCAACACTGTCTTAGAGCACTGTGGGCTGACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR CAA 90 bp | GAGCTTGTGCCTGTCACAGTTTTAGAATGGCCTCATGTTTCTCAGTaGTCAGGGAAGAACAGGTTATCTGCCGAGTCTGATGGTGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: ELVPVTVLEWPHVSQ*SGKNRLSAESDGVS Trigger: AGACACACCATCAGACTCGGCAGATAACCTGTTCTTCCCTGACAACTGAGAAACATGAGGCCATTCTAAAACTGTGACAGGCACAAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR TCA 90 bp | AGGTGTTGCATCAGAATGAGACAAAGTGGAAATTGCTCTCTGCTCCAGCCATGGTTCGGCATCAATGTCTaGGACTGGAAAGTGCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: RCCIRMRQSGNCSLLQPWFGINV*DWKVQS Trigger: TGACTGCACTTTCCAGTCTCAGACATTGATGCCGAA...CCATGGCTGGAGCAGAGAGCAATTTCCACTTTGTCTCATTCTGATGCAACACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR TCA 90 bp | AGGTGTTGCATCAGAATGAGACAAAGTGGAAATTGCTCTCTGCTCCAGCCATGGTCTAGTGCTAGGAGATaGAGAGCTGCAGAGACAGTT | + |
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Preference number: 2 (lower is better) Translates to: RCCIRMRQSGNCSLLQPWSSARR*RAAETV Trigger: AACTGTCTCTGCAGCTCTTCATCTCCTAGCACTAGA...CCATGGCTGGAGCAGAGAGCAATTTCCACTTTGTCTCATTCTGATGCAACACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR TCA 90 bp | TTTCACACAGCATTCTGTGATGCACATACTGTCGACACCATCTTACCAAAGATTCAGCCTCCTTCTACCTaGGAGCTAACAGGGAAATGG | + |
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Preference number: 2 (lower is better) Translates to: FHTAFCDAHTVDTILPKIQPPST*ELTGKW Trigger: CCATTTCCCTGTTAGCTCTCAGGTAGAAGGAGGCTG...AATCTTTGGTAAGATGGTGTCGACAGTATGTGCATCACAGAATGCTGTGTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR TCA 90 bp | AGGTGTTGCATCAGAATGAGACAAAGTGGAAATTGCTCTCTGCTCCAGCCATGGGTGCAACAACAAAATTaGGCCCCAAACAGGTTATCA | + |
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Preference number: 2 (lower is better) Translates to: RCCIRMRQSGNCSLLQPWVQQQN*APNRLS Trigger: TGATAACCTGTTTGGGGCTCAATTTTGTTGTTGCAC...CCATGGCTGGAGCAGAGAGCAATTTCCACTTTGTCTCATTCTGATGCAACACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR CCA 90 bp | TTGGCTAGTGCAACAACAAAATTGAGCCCCAAACAGGTTATCATAGGAACACCGTTAGTCAGGTCACACTaGTATCTTCCATGCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LASATTKLSPKQVIIGTPLVRSH*YLPCRQ Trigger: CTGCCTGCATGGAAGATACCAGTGTGACCTGACTAA...CGGTGTTCCTATGATAACCTGTTTGGGGCTCAATTTTGTTGTTGCACTAGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR CCA 90 bp | GATGCAGCCTCCTTCTACCTGAGAGCTAACAGGGAAATGGATTTGTCAGAGTGGGTCACAGTTTTAGAATaGCCTCATGTTTCTCAGTTG | + |
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Preference number: 2 (lower is better) Translates to: DAASFYLRANREMDLSEWVTVLE*PHVSQL Trigger: CAACTGAGAAACATGAGGCCATTCTAAAACTGTGAC...CCACTCTGACAAATCCATTTCCCTGTTAGCTCTCAGGTAGAAGGAGGCTGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR CCA 90 bp | TTAGTCAGCCCACAGTGCTCTAAGACAGTGTTGAGTATACCAGCAGGAACTGGTACCACAGCATCAAAATaGGCCACACACCATTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: LVSPQCSKTVLSIPAGTGTTASK*ATHHFV Trigger: AACAAAATGGTGTGTGGCCCATTTTGATGCTGTGGT...ACCAGTTCCTGCTGGTATACTCAACACTGTCTTAGAGCACTGTGGGCTGACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR GCA 90 bp | AACACAGCTCCCACCTTCATCTGGGCTCCATTTTATGAAGGAAATAAGTTAGAACACTGGTATCTTCCATaGAGGCAGTTTCTAAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: NTAPTFIWAPFYEGNKLEHWYLP*RQFLRQ Trigger: CTGCCTTAGAAACTGCCTGCATGGAAGATACCAGTG...TTCTAACTTATTTCCTTCATAAAATGGAGCCCAGATGAAGGTGGGAGCTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR GCA 90 bp | TTGGCTAGTGCAACAACAAAATTGAGCCCCAAACAGGTTATCATAGGAACACCGAGGCAGCAAATAATGTaGCAACACATGGTCAACCAT | + |
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Preference number: 2 (lower is better) Translates to: LASATTKLSPKQVIIGTPRQQIM*QHMVNH Trigger: ATGGTTGACCATGTGTTGGCACATTATTTGCTGCCT...CGGTGTTCCTATGATAACCTGTTTGGGGCTCAATTTTGTTGTTGCACTAGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR CAA 90 bp | TATCATTGTAATTGGTGGTACAGTTTTCCATTCTTCTCATTAACATaGTGCCCTCTCGAAGGTGACTCTCCAAACAGAACAGGGTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: YHCNWWYSFPFFSLT*CPLEGDSPNRTGSL Trigger: GAGAGACCCTGTTCTGTTTGGAGAGTCACCTTCGAGAGGGCACAATGTTAATGAGAAGAATGGAAAACTGTACCACCAATTACAATGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR GCA 72 bp | CAGTTCAGTCTCTCAGACACAGGGCTGTTGCACAGCTaGAAAACCAAGCCTGCACTCTTCCGGCGGGCGTGG | + |
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Preference number: 3 (lower is better) Translates to: QFSLSDTGLLHS*KTKPALFRRAW Trigger: CCACGCCCGCCGGAAGAGTGCAGGCTTGGTTTTGCAGCTGTGCAACAGCCCTGTGTCTGAGAGACTGAACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR GCA 72 bp | CCAGGGTGGGCACGGACCTCCACAACAAGCAGGCTTTaGAAGGGAAGTCCTGAGCTTGTGCCTGTCACAGTT | + |
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Preference number: 3 (lower is better) Translates to: PGWARTSTTSRL*KGSPELVPVTV Trigger: AACTGTGACAGGCACAAGCTCAGGACTTCCCTTGCAAAGCCTGCTTGTTGTGGAGGTCCGTGCCCACCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR GCA 72 bp | GGAGTCAATCTGATGGGTCAGAGGCAGGGGATTGCCTaGTTTGTGAGTACAGCTCCAAGGCTGCCTTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: GVNLMGQRQGIA*FVSTAPRLPSR Trigger: TCTGGAAGGCAGCCTTGGAGCTGTACTCACAAAGCAGGCAATCCCCTGCCTCTGACCCATCAGATTGACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR GCA 72 bp | AGCAGGAGTCAATCTGATGGGTCAGAGGCAGGGGATTaGCTGCTTTGTGAGTACAGCTCCAAGGCTGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: SRSQSDGSEAGD*LLCEYSSKAAF Trigger: GAAGGCAGCCTTGGAGCTGTACTCACAAAGCAGGCAATCCCCTGCCTCTGACCCATCAGATTGACTCCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR GCA 72 bp | GTGACTCTCCAAACAGAACAGGGTCTCTCTGCTGTCTaGCCAGCCTACAGTTCAGTCTCTCAGACACAGGGC | + |
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Preference number: 3 (lower is better) Translates to: VTLQTEQGLSAV*PAYSSVSQTQG Trigger: GCCCTGTGTCTGAGAGACTGAACTGTAGGCTGGGCAGACAGCAGAGAGACCCTGTTCTGTTTGGAGAGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR TCA 72 bp | TGCCCCGCCACTGGATGGATGCAGCCTCCTTCTACCTaGGAGCTAACAGGGAAATGGATTTGTCAGAGTGGA | + |
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Preference number: 3 (lower is better) Translates to: CPATGWMQPPST*ELTGKWICQSG Trigger: TCCACTCTGACAAATCCATTTCCCTGTTAGCTCTCAGGTAGAAGGAGGCTGCATCCATCCAGTGGCGGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR TCA 72 bp | AACCAAATGGACACTGAGAAAACACCCCATGGGTACTaGTCTCAGCAGGGACTCCACCTTGCCTCACTGGGG | + |
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Preference number: 3 (lower is better) Translates to: NQMDTEKTPHGY*SQQGLHLASLG Trigger: CCCCAGTGAGGCAAGGTGGAGTCCCTGCTGAGATCAGTACCCATGGGGTGTTTTCTCAGTGTCCATTTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR GCA 72 bp | CTCGAAGGTGACTCTCCAAACAGAACAGGGTCTCTCTaGTGTCTGCCCAGCCTACAGTTCAGTCTCTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: LEGDSPNRTGSL*CLPSLQFSLSD Trigger: GTCTGAGAGACTGAACTGTAGGCTGGGCAGACAGCAGAGAGACCCTGTTCTGTTTGGAGAGTCACCTTCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR CAA 90 bp | GGTTCTAATGGTCCTCGCCTAGACAAGTCAGGTTCAGAGAGCAGAGCCAGCCTGCTACTGCAGTGTGTATaGACATGTGTAGGAGTCTTG | + |
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Preference number: 3 (lower is better) Translates to: GSNGPRLDKSGSESRASLLLQCV*TCVGVL Trigger: CAAGACTCCTACACATGTCAATACACACTGCAGTAG...CAGGCTGGCTCTGCTCTCTGAACCTGACTTGTCTAGGCGAGGACCATTAGAACC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR-3UTR CAA 90 bp | TCTCTCTGCTGTCTGCCCAGCCTACAGTTCAGTCTCTCAGACACAGGGCTGTTGAGTGCAGTCAGTGTCTaGAAGAGTTTTCAGGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: SLCCLPSLQFSLSDTGLLSAVSV*KSFQAL Trigger: AAGAGCCTGAAAACTCTTCAAGACACTGACTGCACT...CAACAGCCCTGTGTCTGAGAGACTGAACTGTAGGCTGGGCAGACAGCAGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR TCA 72 bp | GACCTCCACAACAAGCAGGCTTTGCAAGGGAAGTCCTaGGCTTGTGCCTGTCACAGTTTTAGAATGGCCTCA | + |
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Preference number: 3 (lower is better) Translates to: DLHNKQALQGKS*ACACHSFRMAS Trigger: TGAGGCCATTCTAAAACTGTGACAGGCACAAGCTCAGGACTTCCCTTGCAAAGCCTGCTTGTTGTGGAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| 3UTR CCA 72 bp | TACCTGAGAGCTAACAGGGAAATGGATTTGTCAGAGTaGATAAGCGCAGCTCGGGAAATGGCCAAGGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: YLRANREMDLSE*ISAAREMAKAA Trigger: TGCTGCCTTGGCCATTTCCCGAGCTGCGCTTATCCACTCTGACAAATCCATTTCCCTGTTAGCTCTCAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| 3UTR CCA 72 bp | CAGAAACCGCTGAGTAATATGCCTTCCGAGAAGATCTaGCATAAACACAGCTCCCACCTTCATCTGGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: QKPLSNMPSEKI*HKHSSHLHLGS Trigger: GGAGCCCAGATGAAGGTGGGAGCTGTGTTTATGCCAGATCTTCTCGGAAGGCATATTACTCAGCGGTTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| 3UTR CCA 72 bp | ACAAGTCAGGTTCAGAGAGCAGAGCCAGCCTGCAAATaGCTTTTTCCGCTGCGTAGGTGTTGCATCAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: TSQVQRAEPACK*LFPLRRCCIRM Trigger: CATTCTGATGCAACACCTACGCAGCGGAAAAAGCCATTTGCAGGCTGGCTCTGCTCTCTGAACCTGACTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| 3UTR CCA 72 bp | GGAAGTCCTGAGCTTGTGCCTGTCACAGTTTTAGAATaGCCTCATGTTTCTCAGTTGTCAGGGAAGAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: GSPELVPVTVLE*PHVSQLSGKNR Trigger: CCTGTTCTTCCCTGACAACTGAGAAACATGAGGCCATTCTAAAACTGTGACAGGCACAAGCTCAGGACTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| 3UTR-3UTR CAA 90 bp | TTAGTCAGCCCACAGTGCTCTAAGACAGTGTTGAGTATACCAGCAGGAACTGGTGAGCTGCAGAGACAGTaGCCATGGAAACCAATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LVSPQCSKTVLSIPAGTGELQRQ*PWKPIF Trigger: GAAAATTGGTTTCCATGGCAACTGTCTCTGCAGCTC...ACCAGTTCCTGCTGGTATACTCAACACTGTCTTAGAGCACTGTGGGCTGACTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| 3UTR-3UTR CAA 90 bp | TTAGTCAGCCCACAGTGCTCTAAGACAGTGTTGAGTATACCAGCAGGAACTGGTAACAGGGAAATGGATTaGTCAGAGTGGATAAGCGCA | + |
|
Preference number: 3 (lower is better) Translates to: LVSPQCSKTVLSIPAGTGNREMD*SEWISA Trigger: TGCGCTTATCCACTCTGACAAATCCATTTCCCTGTT...ACCAGTTCCTGCTGGTATACTCAACACTGTCTTAGAGCACTGTGGGCTGACTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| 3UTR TCA 72 bp | AATTTTCCCCACATTTCCTGCAGAGCCAGAAACCGCTaGGTAATATGCCTTCCGAGAAGATCTGGCATAAAC | + |
|
Preference number: 3 (lower is better) Translates to: NFPHISCRARNR*VICLPRRSGIN Trigger: GTTTATGCCAGATCTTCTCGGAAGGCATATTACTCAGCGGTTTCTGGCTCTGCAGGAAATGTGGGGAAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| 3UTR-3UTR CAA 90 bp | TTAGTCAGCCCACAGTGCTCTAAGACAGTGTTGAGTATACCAGCAGGAACTGGTGGGCCACACACCATTTaGTTTATGTATGATCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LVSPQCSKTVLSIPAGTGGPHTI*FMYDLE Trigger: TTCAAGATCATACATAAACAAAATGGTGTGTGGCCC...ACCAGTTCCTGCTGGTATACTCAACACTGTCTTAGAGCACTGTGGGCTGACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| 3UTR-3UTR CAA 90 bp | TTTCACACAGCATTCTGTGATGCACATACTGTCGACACCATCTTACCAAAGATTGAGACAAAGTGGAAATaGCTCTCTGCTCCAGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: FHTAFCDAHTVDTILPKIETKWK*LSAPAM Trigger: CATGGCTGGAGCAGAGAGCAATTTCCACTTTGTCTC...AATCTTTGGTAAGATGGTGTCGACAGTATGTGCATCACAGAATGCTGTGTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| 3UTR TCA 72 bp | AGTTACTTTCGAACATTACATGCCTCTGCTACCCTGTaGTCACAGAGTCAAGCTTACTCTTACATAACCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SYFRTLHASATL*SQSQAYSYITL Trigger: GAGGGTTATGTAAGAGTAAGCTTGACTCTGTGATCACAGGGTAGCAGAGGCATGTAATGTTCGAAAGTAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| 3UTR GCA 72 bp | ATTTTGTGTTCGGCATCAATGTCTGAGACTGGAAAGTaGAGTCAGTGTCTTGAAGAGTTTTCAGGCTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: ILCSASMSETGK*SQCLEEFSGSS Trigger: TGAAGAGCCTGAAAACTCTTCAAGACACTGACTGCACTTTCCAGTCTCAGACATTGATGCCGAACACAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| 3UTR-3UTR CAA 90 bp | AACACAGCTCCCACCTTCATCTGGGCTCCATTTTATGAAGGAAATAAGTTAGAACCTCATGTTTCTCAGTaGTCAGGGAAGAACAGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: NTAPTFIWAPFYEGNKLEPHVSQ*SGKNRL Trigger: TAACCTGTTCTTCCCTGACAACTGAGAAACATGAGG...TTCTAACTTATTTCCTTCATAAAATGGAGCCCAGATGAAGGTGGGAGCTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| 3UTR-3UTR CAA 90 bp | AACACAGCTCCCACCTTCATCTGGGCTCCATTTTATGAAGGAAATAAGTTAGAACATCTGCATAGCTACTaGTTTAGTCACTCTGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: NTAPTFIWAPFYEGNKLEHLHSY*FSHSVL Trigger: GAGGACAGAGTGACTAAACAAGTAGCTATGCAGATG...TTCTAACTTATTTCCTTCATAAAATGGAGCCCAGATGAAGGTGGGAGCTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| 3UTR GCA 72 bp | TCAAGCTTACTCTTACATAACCCTCAGCACTTTTGTTaGTATGTGTTAATATATATGCACACTCCCAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSLLLHNPQHFC*YVLIYMHTPKS Trigger: GCTCTTGGGAGTGTGCATATATATTAACACATAGCAACAAAAGTGCTGAGGGTTATGTAAGAGTAAGCTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| 3UTR TCA 72 bp | ATCAAGTTTAAATGTATGACACTCCTTTTATGTCTCTaGTGGTTGCTACATCCAGTTGCCTCTACTGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: IKFKCMTLLLCL*WLLHPVASTEN Trigger: GTTTTCAGTAGAGGCAACTGGATGTAGCAACCATCAGAGACATAAAAGGAGTGTCATACATTTAAACTTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| 3UTR TCA 72 bp | GTAAAGGGTATCGGAGCCATTTTTATTCTTTCACTCTaGGTCTTTAACTTACAAAGAATTGCAAGCGCAATA | + |
|
Preference number: 3 (lower is better) Translates to: VKGIGAIFILSL*VFNLQRIASAI Trigger: TATTGCGCTTGCAATTCTTTGTAAGTTAAAGACTCAGAGTGAAAGAATAAAAATGGCTCCGATACCCTTTAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CCA 90 bp | TTAGTCAGCCCACAGTGCTCTAAGACAGTGTTGAGTATACCAGCAGGAACTGGTCAGGCGCCCGGCCTGTaGGGAGAGGCGGGCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LVSPQCSKTVLSIPAGTGQAPGL*GEAGFI Trigger: GATGAAGCCCGCCTCTCCCCACAGGCCGGGCGCCTG...ACCAGTTCCTGCTGGTATACTCAACACTGTCTTAGAGCACTGTGGGCTGACTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR TCA 90 bp | GGTTCTAATGGTCCTCGCCTAGACAAGTCAGGTTCAGAGAGCAGAGCCAGCCTGAGCTTCGCCGCCTCATaGAAGAATGGGAATTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSNGPRLDKSGSESRASLSFAAS*KNGNWG Trigger: CCCCCAATTCCCATTCTTTCATGAGGCGGCGAAGCT...CAGGCTGGCTCTGCTCTCTGAACCTGACTTGTCTAGGCGAGGACCATTAGAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CCA 90 bp | AGGTTCAGAGAGCAGAGCCAGCCTGCAAATGGCTTTTTCCGCTGCGTAGGTGTTCATAGGCATAGAACCTaGGGGACAGCATGGGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: RFREQSQPANGFFRCVGVHRHRT*GTAWGR Trigger: GCGACCCCATGCTGTCCCCCAGGTTCTATGCCTATG...AACACCTACGCAGCGGAAAAAGCCATTTGCAGGCTGGCTCTGCTCTCTGAACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR TCA 90 bp | AGGTTCAGAGAGCAGAGCCAGCCTGCAAATGGCTTTTTCCGCTGCGTAGGTGTTACTCAGCACAGCCGCTaGAGCCAGAGGGGATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RFREQSQPANGFFRCVGVTQHSR*SQRGYS Trigger: AGAATATCCCCTCTGGCTTCAGCGGCTGTGCTGAGT...AACACCTACGCAGCGGAAAAAGCCATTTGCAGGCTGGCTCTGCTCTCTGAACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR TCA 90 bp | TTAGTCAGCCCACAGTGCTCTAAGACAGTGTTGAGTATACCAGCAGGAACTGGTGCCGTGTCCTGGGGGTaGGGTCCTCTTCAGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LVSPQCSKTVLSIPAGTGAVSWG*GPLQRS Trigger: AGATCTCTGAAGAGGACCTCACCCCCAGGACACGGC...ACCAGTTCCTGCTGGTATACTCAACACTGTCTTAGAGCACTGTGGGCTGACTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR TCA 90 bp | AGGTTCAGAGAGCAGAGCCAGCCTGCAAATGGCTTTTTCCGCTGCGTAGGTGTTGGAGCTGTCATCTTCTaGACCCTCCTCTTGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RFREQSQPANGFFRCVGVGAVIF*TLLLFL Trigger: AAGGAACAAGAGGAGGGTTCAGAAGATGACAGCTCC...AACACCTACGCAGCGGAAAAAGCCATTTGCAGGCTGGCTCTGCTCTCTGAACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR TCA 90 bp | TACCTGAGAGCTAACAGGGAAATGGATTTGTCAGAGTGGATAAGCGCAGCTCGGTCCTGCTTCTTAAATTaGTGCCCTCGCTGCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YLRANREMDLSEWISAARSCFLN*CPRCLV Trigger: CACCAGGCAGCGAGGGCATCAATTTAAGAAGCAGGA...CCGAGCTGCGCTTATCCACTCTGACAAATCCATTTCCCTGTTAGCTCTCAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CCA 90 bp | GGTTCTAATGGTCCTCGCCTAGACAAGTCAGGTTCAGAGAGCAGAGCCAGCCTGTGGATTTCTGACGCTTaGGTTTGCTTCTTTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GSNGPRLDKSGSESRASLWISDA*VCFFPQ Trigger: TTGGGGAAAGAAGCAAACCCAAGCGTCAGAAATCCA...CAGGCTGGCTCTGCTCTCTGAACCTGACTTGTCTAGGCGAGGACCATTAGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CCA 90 bp | GATGCAGCCTCCTTCTACCTGAGAGCTAACAGGGAAATGGATTTGTCAGAGTGGCAACTGGGGCATATCTaGGACAAAGCTCTCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DAASFYLRANREMDLSEWQLGHI*DKALLL Trigger: CAGCAGGAGAGCTTTGTCCCAGATATGCCCCAGTTG...CCACTCTGACAAATCCATTTCCCTGTTAGCTCTCAGGTAGAAGGAGGCTGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CCA 90 bp | TTAGTCAGCCCACAGTGCTCTAAGACAGTGTTGAGTATACCAGCAGGAACTGGTTCTGGTGAGCTGCACTaGTGTCAGGTCCTCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVSPQCSKTVLSIPAGTGSGELH*CQVLLL Trigger: GAGCAAGAGGACCTGACACCAGTGCAGCTCACCAGA...ACCAGTTCCTGCTGGTATACTCAACACTGTCTTAGAGCACTGTGGGCTGACTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CCA 90 bp | TTAGTCAGCCCACAGTGCTCTAAGACAGTGTTGAGTATACCAGCAGGAACTGGTGCTGCCAGGAAGGAATaGGTTCTTCCCAGGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVSPQCSKTVLSIPAGTGAARKE*VLPRSS Trigger: AGAAGACCTGGGAAGAACCCATTCCTTCCTGGCAGC...ACCAGTTCCTGCTGGTATACTCAACACTGTCTTAGAGCACTGTGGGCTGACTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CCA 90 bp | AGGTTCAGAGAGCAGAGCCAGCCTGCAAATGGCTTTTTCCGCTGCGTAGGTGTTGGGAACCAAAACTCTTaGGGAGTGTGTTACTTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: RFREQSQPANGFFRCVGVGNQNS*GVCYFV Trigger: AACGAAGTAACACACTCCCCAAGAGTTTTGGTTCCC...AACACCTACGCAGCGGAAAAAGCCATTTGCAGGCTGGCTCTGCTCTCTGAACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR TCA 90 bp | TCGAAGGTGACTCTCCAAACAGAACAGGGTCTCTCTGCTGTCTGCCCAGCCTACTCTTCTCTCATTTCCTaGAGGTATTCCAAGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKVTLQTEQGLSAVCPAYSSLIS*RYSKSS Trigger: TGAACTCTTGGAATACCTTCAGGAAATGAGAGAAGA...GTAGGCTGGGCAGACAGCAGAGAGACCCTGTTCTGTTTGGAGAGTCACCTTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR GCA 90 bp | GATGCAGCCTCCTTCTACCTGAGAGCTAACAGGGAAATGGATTTGTCAGAGTGGTCTGACGCTTGGGTTTaGTTCTTTCCCCAACGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: DAASFYLRANREMDLSEWSDAWV*FFPQRS Trigger: ACTACGTTGGGGAAAGAAGCAAACCCAAGCGTCAGA...CCACTCTGACAAATCCATTTCCCTGTTAGCTCTCAGGTAGAAGGAGGCTGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR GCA 90 bp | TTGGCTAGTGCAACAACAAAATTGAGCCCCAAACAGGTTATCATAGGAACACCGCCCTCGATAATCGGCTaGAGCGAAGGGCTTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LASATTKLSPKQVIIGTPPSIIG*SEGLLL Trigger: AAGGAGAAGCCCTTCGCTGCAGCCGATTATCGAGGG...CGGTGTTCCTATGATAACCTGTTTGGGGCTCAATTTTGTTGTTGCACTAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CCA 90 bp | GAAGTTCCTACTGCAGTGTGTATTGACATGTGTAGGAGTCTTGACTCTCCCACTGCTGCCTTATCACTGTaGGAGGGTCTGTACTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EVPTAVCIDMCRSLDSPTAALSL*EGLYFL Trigger: GAGGAAGTACAGACCCTCCCACAGTGATAAGGCAGC...AGTGGGAGAGTCAAGACTCCTACACATGTCAATACACACTGCAGTAGGAACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CCA 90 bp | TACCTGAGAGCTAACAGGGAAATGGATTTGTCAGAGTGGATAAGCGCAGCTCGGGTACTCTTCAGCCATTaGAGTACGGTCTTCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YLRANREMDLSEWISAARVLFSH*STVFLL Trigger: CAGAAGGAAGACCGTACTCCAATGGCTGAAGAGTAC...CCGAGCTGCGCTTATCCACTCTGACAAATCCATTTCCCTGTTAGCTCTCAGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR TCA 90 bp | TACCTGAGAGCTAACAGGGAAATGGATTTGTCAGAGTGGATAAGCGCAGCTCGGGGTTCCAGTGTTTCTTaGGATTGCATGGAACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YLRANREMDLSEWISAARGSSVS*DCMELR Trigger: TCTCAGTTCCATGCAATCTCAAGAAACACTGGAACC...CCGAGCTGCGCTTATCCACTCTGACAAATCCATTTCCCTGTTAGCTCTCAGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR TCA 90 bp | AGGTTCAGAGAGCAGAGCCAGCCTGCAAATGGCTTTTTCCGCTGCGTAGGTGTTAGAGATCTTCAGTTTTaGTTCTTTCAGCTGTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RFREQSQPANGFFRCVGVRDLQF*FFQLFP Trigger: CGGAAACAGCTGAAAGAATCAAAACTGAAGATCTCT...AACACCTACGCAGCGGAAAAAGCCATTTGCAGGCTGGCTCTGCTCTCTGAACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR TCA 90 bp | GAAGTTCCTACTGCAGTGTGTATTGACATGTGTAGGAGTCTTGACTCTCCCACTCTTCAACACTGGGCCTaGTGGCTTTATCCAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: EVPTAVCIDMCRSLDSPTLQHWA*WLYPAV Trigger: AACTGCTGGATAAAGCCATCAGGCCCAGTGTTGAAG...AGTGGGAGAGTCAAGACTCCTACACATGTCAATACACACTGCAGTAGGAACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR GCA 90 bp | AGAACACATCACAGGAATGACAGCAGGCACACAGAAGAGATGAATAATGGGGAGTCCTTGTCGCAACCATaGCAGACATCATCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTHHRNDSRHTEEMNNGESLSQP*QTSSCF Trigger: GAAGCAGGATGATGTCTGGCATGGTTGCGACAAGGA...CTCCCCATTATTCATCTCTTCTGTGTGCCTGCTGTCATTCCTGTGATGTGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR GCA 90 bp | AGAACACATCACAGGAATGACAGCAGGCACACAGAAGAGATGAATAATGGGGAGTCTGCATTCTCTGGCTaGCAGGAAGGAATGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RTHHRNDSRHTEEMNNGESAFSG*QEGMGS Trigger: AGAACCCATTCCTTCCTGGCAGCCAGAGAATGCAGA...CTCCCCATTATTCATCTCTTCTGTGTGCCTGCTGTCATTCCTGTGATGTGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CCA 90 bp | GAAGTTCCTACTGCAGTGTGTATTGACATGTGTAGGAGTCTTGACTCTCCCACTGAGTCCTCTGAACTTTaGTCTCCAGCGTTGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: EVPTAVCIDMCRSLDSPTESSEL*SPALLT Trigger: TGTCAGCAACGCTGGAGACCAAAGTTCAGAGGACTC...AGTGGGAGAGTCAAGACTCCTACACATGTCAATACACACTGCAGTAGGAACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CCA 90 bp | TACCTGAGAGCTAACAGGGAAATGGATTTGTCAGAGTGGATAAGCGCAGCTCGGCAAAGTCTGGCTTTGTaGAGCTGTCATCTTCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YLRANREMDLSEWISAARQSLAL*SCHLLN Trigger: GTTCAGAAGATGACAGCTCCACAAAGCCAGACTTTG...CCGAGCTGCGCTTATCCACTCTGACAAATCCATTTCCCTGTTAGCTCTCAGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR GCA 90 bp | AGGTGTTGCATCAGAATGAGACAAAGTGGAAATTGCTCTCTGCTCCAGCCATGGGTCCTGGAATCTTTCTaGTTCCTGGCTGTTCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RCCIRMRQSGNCSLLQPWVLESF*FLAVQD Trigger: ATCTTGAACAGCCAGGAAGCAGAAAGATTCCAGGAC...CCATGGCTGGAGCAGAGAGCAATTTCCACTTTGTCTCATTCTGATGCAACACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CCA 90 bp | GATGCAGCCTCCTTCTACCTGAGAGCTAACAGGGAAATGGATTTGTCAGAGTGGTCACAAATATCGTCCTaGAATCTTTCTGCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DAASFYLRANREMDLSEWSQISS*NLSASW Trigger: CCAGGAAGCAGAAAGATTCCAGGACGATATTTGTGA...CCACTCTGACAAATCCATTTCCCTGTTAGCTCTCAGGTAGAAGGAGGCTGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CCA 90 bp | AGGTGTTGCATCAGAATGAGACAAAGTGGAAATTGCTCTCTGCTCCAGCCATGGTGGTGTCAGATAGACTaGGATGCTCCTGAATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RCCIRMRQSGNCSLLQPWWCQID*DAPESS Trigger: TGAAGATTCAGGAGCATCCCAGTCTATCTGACACCA...CCATGGCTGGAGCAGAGAGCAATTTCCACTTTGTCTCATTCTGATGCAACACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CCA 90 bp | GATGCAGCCTCCTTCTACCTGAGAGCTAACAGGGAAATGGATTTGTCAGAGTGGTCTTCTTTTTCTAGCTaGGAACCAAAACTCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DAASFYLRANREMDLSEWSSFSS*EPKLLG Trigger: CCCCAAGAGTTTTGGTTCCCAGCTAGAAAAAGAAGA...CCACTCTGACAAATCCATTTCCCTGTTAGCTCTCAGGTAGAAGGAGGCTGCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| 3UTR CAA 72 bp | GCAAGACTCCTTTGTTTGGCTAGTGCAACAACAAAATaGAGCCCCAAACAGGTTATCATAGGAACACCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ARLLCLASATTK*SPKQVIIGTPA Trigger: GGCCGGTGTTCCTATGATAACCTGTTTGGGGCTCAATTTTGTTGTTGCACTAGCCAAACAAAGGAGTCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR GCA 90 bp | TTTCACACAGCATTCTGTGATGCACATACTGTCGACACCATCTTACCAAAGATTATCCTTCTGGTGAGCTaGACTGGTGTCAGGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FHTAFCDAHTVDTILPKIILLVS*TGVRSS Trigger: AGAGGACCTGACACCAGTGCAGCTCACCAGAAGGAT...AATCTTTGGTAAGATGGTGTCGACAGTATGTGCATCACAGAATGCTGTGTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CCA 90 bp | TTAGTCAGCCCACAGTGCTCTAAGACAGTGTTGAGTATACCAGCAGGAACTGGTGTACGGTCTTCCTTCTaGACATTTCTCCCATTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVSPQCSKTVLSIPAGTGVRSSF*TFLPFC Trigger: ACAAAATGGGAGAAATGTCCAGAAGGAAGACCGTAC...ACCAGTTCCTGCTGGTATACTCAACACTGTCTTAGAGCACTGTGGGCTGACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR TCA 90 bp | AGAACACATCACAGGAATGACAGCAGGCACACAGAAGAGATGAATAATGGGGAGAGTCTGTTTTCAAAGTaGCAGCAAAGTCTGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RTHHRNDSRHTEEMNNGESLFSK*QQSLAL Trigger: CAAAGCCAGACTTTGCTGTCACTTTGAAAACAGACT...CTCCCCATTATTCATCTCTTCTGTGTGCCTGCTGTCATTCCTGTGATGTGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR GCA 90 bp | GAAGTTCCTACTGCAGTGTGTATTGACATGTGTAGGAGTCTTGACTCTCCCACTTATAGCAGGGCTTTCTaGAGAGCCACTTTCTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: EVPTAVCIDMCRSLDSPTYSRAF*RATFSL Trigger: TAATGAGAAAGTGGCTCTGCAGAAAGCCCTGCTATA...AGTGGGAGAGTCAAGACTCCTACACATGTCAATACACACTGCAGTAGGAACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR GCA 90 bp | GAAGTTCCTACTGCAGTGTGTATTGACATGTGTAGGAGTCTTGACTCTCCCACTGTCCAGAAAGCAATGTaGACTGCAGTCTGTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EVPTAVCIDMCRSLDSPTVQKAM*TAVCFQ Trigger: TTGAAAACAGACTGCAGTGCACATTGCTTTCTGGAC...AGTGGGAGAGTCAAGACTCCTACACATGTCAATACACACTGCAGTAGGAACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CCA 90 bp | TTGGCTAGTGCAACAACAAAATTGAGCCCCAAACAGGTTATCATAGGAACACCGGATTCCTCTGCTGTTTaGTGTCAGATAGACTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LASATTKLSPKQVIIGTPDSSAV*CQIDWD Trigger: ATCCCAGTCTATCTGACACCAAACAGCAGAGGAATC...CGGTGTTCCTATGATAACCTGTTTGGGGCTCAATTTTGTTGTTGCACTAGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CCA 90 bp | GAAGTTCCTACTGCAGTGTGTATTGACATGTGTAGGAGTCTTGACTCTCCCACTGCTGTTTCCGGAATTTaGCCAAGTCATTTGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: EVPTAVCIDMCRSLDSPTAVSGI*PSHLSI Trigger: AATGGACAAATGACTTGGCCAAATTCCGGAAACAGC...AGTGGGAGAGTCAAGACTCCTACACATGTCAATACACACTGCAGTAGGAACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR TCA 90 bp | AGGTGTTGCATCAGAATGAGACAAAGTGGAAATTGCTCTCTGCTCCAGCCATGGTTTGTCATCCATTGGTaGAATAAATCCATCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: RCCIRMRQSGNCSLLQPWFVIHW*NKSISI Trigger: GATGCTGATGGATTTATTTCACCAATGGATGACAAA...CCATGGCTGGAGCAGAGAGCAATTTCCACTTTGTCTCATTCTGATGCAACACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR GCA 90 bp | TACCTGAGAGCTAACAGGGAAATGGATTTGTCAGAGTGGATAAGCGCAGCTCGGAGCTTTGCCTTTATGTaGTTGTATTCATTGTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: YLRANREMDLSEWISAARSFAFM*LYSLYS Trigger: AGAGTACAATGAATACAAGCACATAAAGGCAAAGCT...CCGAGCTGCGCTTATCCACTCTGACAAATCCATTTCCCTGTTAGCTCTCAGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CCA 90 bp | TTTCACACAGCATTCTGTGATGCACATACTGTCGACACCATCTTACCAAAGATTGGTATTGAAGCAGAGTaGAGGTTTGAAAGGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FHTAFCDAHTVDTILPKIGIEAE*RFERPE Trigger: CTCAGGCCTTTCAAACCTCCACTCTGCTTCAATACC...AATCTTTGGTAAGATGGTGTCGACAGTATGTGCATCACAGAATGCTGTGTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CCA 90 bp | TTTCACACAGCATTCTGTGATGCACATACTGTCGACACCATCTTACCAAAGATTTTCTTTTTAAGGGTCTaGATCCTTCTGGTGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FHTAFCDAHTVDTILPKIFFLRV*ILLVSC Trigger: GCAGCTCACCAGAAGGATCCAGACCCTTAAAAAGAA...AATCTTTGGTAAGATGGTGTCGACAGTATGTGCATCACAGAATGCTGTGTGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CCA 90 bp | TTTCACACAGCATTCTGTGATGCACATACTGTCGACACCATCTTACCAAAGATTCTGGCTGCATTTCGATaGCATTTTGTCATCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: FHTAFCDAHTVDTILPKILAAFR*HFVIHW Trigger: CCAATGGATGACAAAATGCCATCGAAATGCAGCCAG...AATCTTTGGTAAGATGGTGTCGACAGTATGTGCATCACAGAATGCTGTGTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| 3UTR CAA 72 bp | ATTCTCCTAAGTAGCTTCAGCATTTGGGGTACAGTTTaGTTCCTCTCTACTGCTTTAACCAAATGGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: ILLSSFSIWGTV*FLSTALTKWTL Trigger: CAGTGTCCATTTGGTTAAAGCAGTAGAGAGGAACAAAACTGTACCCCAAATGCTGAAGCTACTTAGGAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR TCA 90 bp | AACACAGCTCCCACCTTCATCTGGGCTCCATTTTATGAAGGAAATAAGTTAGAACTTCTACTGCTGACCTaGTGGTTCTTTCTAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NTAPTFIWAPFYEGNKLELLLLT*WFFLRV Trigger: AACTCTTAGAAAGAACCATCAGGTCAGCAGTAGAAG...TTCTAACTTATTTCCTTCATAAAATGGAGCCCAGATGAAGGTGGGAGCTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR TCA 90 bp | TTTCACACAGCATTCTGTGATGCACATACTGTCGACACCATCTTACCAAAGATTGTTCCTTTATCTCCTTaGAGAAGGAAGCAGTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FHTAFCDAHTVDTILPKIVPLSP*RRKQFH Trigger: GTGAAACTGCTTCCTTCTTCAAGGAGATAAAGGAAC...AATCTTTGGTAAGATGGTGTCGACAGTATGTGCATCACAGAATGCTGTGTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR GCA 90 bp | TTTCACACAGCATTCTGTGATGCACATACTGTCGACACCATCTTACCAAAGATTCTGACATCAAAAAGATaGTCTTCTACTGCTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: FHTAFCDAHTVDTILPKILTSKR*SSTADL Trigger: CAGGTCAGCAGTAGAAGAGCATCTTTTTGATGTCAG...AATCTTTGGTAAGATGGTGTCGACAGTATGTGCATCACAGAATGCTGTGTGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| 3UTR CAA 72 bp | TTATTCTTTCACTCTGAGTCTTTAACTTACAAAGAATaGCAAGCGCAATACTGCTCACAGTTTAGTCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LFFHSESLTYKE*QAQYCSQFSQP Trigger: GGGCTGACTAAACTGTGAGCAGTATTGCGCTTGCAATTCTTTGTAAGTTAAAGACTCAGAGTGAAAGAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS GCA 90 bp | AATCAGGCGCCCGGCCTGTGGGGAGAGGCGGGCTTCATCAGAGTCTaGATTCTCTGGCTGCCAGGAAGGAATGGGTTCTTCCCAGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: NQAPGLWGEAGFIRV*ILWLPGRNGFFPGL Trigger: AAGACCTGGGAAGAACCCATTCCTTCCTGGCAGCCAGAGAATGCAGACTCTGATGAAGCCCGCCTCTCCCCACAGGCCGGGCGCCTGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
||
| CDS CCA 90 bp | CCCGGCCTGTGGGGAGAGGCGGGCTTCATCAGAGTCTGCATTCTCTaGCTGCCAGGAAGGAATGGGTTCTTCCCAGGTCTTCTCATCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGLWGEAGFIRVCIL*LPGRNGFFPGLLIA Trigger: TGCGATGAGAAGACCTGGGAAGAACCCATTCCTTCCTGGCAGCCAGAGAATGCAGACTCTGATGAAGCCCGCCTCTCCCCACAGGCCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
||
| CDS CCA 90 bp | GTCGCTGTCTTCATCCAGAAACTGGTGAATCAGGCGCCCGGCCTGTaGGGAGAGGCGGGCTTCATCAGAGTCTGCATTCTCTGGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VAVFIQKLVNQAPGL*GEAGFIRVCILWLP Trigger: TGGCAGCCAGAGAATGCAGACTCTGATGAAGCCCGCCTCTCCCCACAGGCCGGGCGCCTGATTCACCAGTTTCTGGATGAAGACAGCGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
||
| CDS CCA 90 bp | GATACTGCCTGCTCTGCCCATAGGCATAGAACCTGGGGGACAGCATaGGGTCGCTGTCTTCATCCAGAAACTGGTGAATCAGGCGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: DTACSAHRHRTWGTA*GRCLHPETGESGAR Trigger: CCGGGCGCCTGATTCACCAGTTTCTGGATGAAGACAGCGACCCCATGCTGTCCCCCAGGTTCTATGCCTATGGGCAGAGCAGGCAGTATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
||
| CDS GCA 90 bp | GCCTGTGGGGAGAGGCGGGCTTCATCAGAGTCTGCATTCTCTGGCTaGCAGGAAGGAATGGGTTCTTCCCAGGTCTTCTCATCGCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: ACGERRASSESAFSG*QEGMGSSQVFSSHN Trigger: ATTGTGCGATGAGAAGACCTGGGAAGAACCCATTCCTTCCTGGCAGCCAGAGAATGCAGACTCTGATGAAGCCCGCCTCTCCCCACAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
||
| CDS GCA 90 bp | CTGCCAGGAAGGAATGGGTTCTTCCCAGGTCTTCTCATCGCACAATaGTGTCAGGTCCAACTGGGGCATATCTGGGACAAAGCTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPGRNGFFPGLLIAQ*CQVQLGHIWDKALL Trigger: CAGGAGAGCTTTGTCCCAGATATGCCCCAGTTGGACCTGACAGCATTGTGCGATGAGAAGACCTGGGAAGAACCCATTCCTTCCTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
||
| CDS-3UTR CAA 90 bp | TCGAAGGTGACTCTCCAAACAGAACAGGGTCTCTCTGCTGTCTGCCCAGCCTACTGGTTGTCACTGAGCTaGGCAAGCCTGGAACTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SKVTLQTEQGLSAVCPAYWLSLS*ASLELD Trigger: ATCCAGTTCCAGGCTTGCCAAGCTCAGTGACAACCA...GTAGGCTGGGCAGACAGCAGAGAGACCCTGTTCTGTTTGGAGAGTCACCTTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS CCA 90 bp | CTGTATCATCCAGATACTGCCTGCTCTGCCCATAGGCATAGAACCTaGGGGACAGCATGGGGTCGCTGTCTTCATCCAGAAACTGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LYHPDTACSAHRHRT*GTAWGRCLHPETGE Trigger: TTCACCAGTTTCTGGATGAAGACAGCGACCCCATGCTGTCCCCCAGGTTCTATGCCTATGGGCAGAGCAGGCAGTATCTGGATGATACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
||
| CDS-3UTR CAA 90 bp | TCGAAGGTGACTCTCCAAACAGAACAGGGTCTCTCTGCTGTCTGCCCAGCCTACTGGGAACCAAAACTCTaGGGGAGTGTGTTACTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SKVTLQTEQGLSAVCPAYWEPKL*GSVLLR Trigger: ACGAAGTAACACACTCCCCAAGAGTTTTGGTTCCCA...GTAGGCTGGGCAGACAGCAGAGAGACCCTGTTCTGTTTGGAGAGTCACCTTCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CAA 90 bp | GGTTCTAATGGTCCTCGCCTAGACAAGTCAGGTTCAGAGAGCAGAGCCAGCCTGGAATCAGAATCTCTTTaGCTGATGAGCACCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSNGPRLDKSGSESRASLESESL*LMSTSS Trigger: GCTGGAGGTGCTCATCAGCAAAAGAGATTCTGATTC...CAGGCTGGCTCTGCTCTCTGAACCTGACTTGTCTAGGCGAGGACCATTAGAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS CCA 90 bp | GGTCTTCTCATCGCACAATGCTGTCAGGTCCAACTGGGGCATATCTaGGACAAAGCTCTCCTGCTGATCTTCACCATCTTGATTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLLIAQCCQVQLGHI*DKALLLIFTILIPL Trigger: CAGAGGAATCAAGATGGTGAAGATCAGCAGGAGAGCTTTGTCCCAGATATGCCCCAGTTGGACCTGACAGCATTGTGCGATGAGAAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
||
| CDS-3UTR CAA 90 bp | AGAACACATCACAGGAATGACAGCAGGCACACAGAAGAGATGAATAATGGGGAGTGGTGTCAGGTCCTCTaGCTCGTCATCGTAGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: RTHHRNDSRHTEEMNNGEWCQVL*LVIVGP Trigger: GGGTCCTACGATGACGAGCAAGAGGACCTGACACCA...CTCCCCATTATTCATCTCTTCTGTGTGCCTGCTGTCATTCCTGTGATGTGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS GCA 90 bp | TTTATCTCCTTGAAGAAGGAAGCAGTTTCACCCTCGATAATCGGCTaGAGCGAAGGGCTTCTCCTTTTGCTGGAGGGGGAACCAATGATG | + |
|
Preference number: 5 (lower is better) Translates to: FISLKKEAVSPSIIG*SEGLLLLLEGEPMM Trigger: CATCATTGGTTCCCCCTCCAGCAAAAGGAGAAGCCCTTCGCTGCAGCCGATTATCGAGGGTGAAACTGCTTCCTTCTTCAAGGAGATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CAA 90 bp | GGTTCTAATGGTCCTCGCCTAGACAAGTCAGGTTCAGAGAGCAGAGCCAGCCTGCAGTGTTTCTTGAGATaGCATGGAACTGAGACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSNGPRLDKSGSESRASLQCFLR*HGTETF Trigger: GAAAGTCTCAGTTCCATGCAATCTCAAGAAACACTG...CAGGCTGGCTCTGCTCTCTGAACCTGACTTGTCTAGGCGAGGACCATTAGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CAA 90 bp | AGAACACATCACAGGAATGACAGCAGGCACACAGAAGAGATGAATAATGGGGAGGAAGGGCTTCTCCTTTaGCTGGAGGGGGAACCAATG | + |
|
Preference number: 5 (lower is better) Translates to: RTHHRNDSRHTEEMNNGEEGLLL*LEGEPM Trigger: CATTGGTTCCCCCTCCAGCAAAAGGAGAAGCCCTTC...CTCCCCATTATTCATCTCTTCTGTGTGCCTGCTGTCATTCCTGTGATGTGTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CAA 90 bp | AGAACACATCACAGGAATGACAGCAGGCACACAGAAGAGATGAATAATGGGGAGAAGCAGAGTGGAGGTTaGAAAGGCCTGAGTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RTHHRNDSRHTEEMNNGEKQSGG*KGLSPG Trigger: GCCAGGACTCAGGCCTTTCAAACCTCCACTCTGCTT...CTCCCCATTATTCATCTCTTCTGTGTGCCTGCTGTCATTCCTGTGATGTGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS CCA 90 bp | ATATCCTTAATGTCCTCAGGACGGCTGGACTCCACTCGCTTCTCTTaGAGTTTTCTTAGTATCCCTTCCAGTGTAGCTTCAACACTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ISLMSSGRLDSTRFS*SFLSIPSSVASTLG Trigger: GCCCAGTGTTGAAGCTACACTGGAAGGGATACTAAGAAAACTCCAAGAGAAGCGAGTGGAGTCCAGCCGTCCTGAGGACATTAAGGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
||
| CDS-3UTR CAA 90 bp | TTAGTCAGCCCACAGTGCTCTAAGACAGTGTTGAGTATACCAGCAGGAACTGGTATCCTGCTTCTTAAATaGATGCCCTCGCTGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LVSPQCSKTVLSIPAGTGILLLK*MPSLPG Trigger: ACCAGGCAGCGAGGGCATCAATTTAAGAAGCAGGAT...ACCAGTTCCTGCTGGTATACTCAACACTGTCTTAGAGCACTGTGGGCTGACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CAA 90 bp | GATGCAGCCTCCTTCTACCTGAGAGCTAACAGGGAAATGGATTTGTCAGAGTGGCCAAGAGTTCAGGTATaGAAGCAGAGTGGAGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: DAASFYLRANREMDLSEWPRVQV*KQSGGL Trigger: CAAACCTCCACTCTGCTTCAATACCTGAACTCTTGG...CCACTCTGACAAATCCATTTCCCTGTTAGCTCTCAGGTAGAAGGAGGCTGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CAA 90 bp | TACCTGAGAGCTAACAGGGAAATGGATTTGTCAGAGTGGATAAGCGCAGCTCGGTGTACTCTTCAGCCATaGGAGTACGGTCTTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: YLRANREMDLSEWISAARCTLQP*EYGLPS Trigger: AGAAGGAAGACCGTACTCCAATGGCTGAAGAGTACA...CCGAGCTGCGCTTATCCACTCTGACAAATCCATTTCCCTGTTAGCTCTCAGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS CCA 90 bp | GCTGTTTGGTGTCAGATAGACTGGGATGCTCCTGAATCTTCATCGTaGGGTTCTCACAATGCTGAGTGTCTCTACCGCCTCTTTCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: AVWCQIDWDAPESSS*GSHNAECLYRLFQF Trigger: AAATTGAAAGAGGCGGTAGAGACACTCAGCATTGTGAGAACCCCACGATGAAGATTCAGGAGCATCCCAGTCTATCTGACACCAAACAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
||
| CDS-3UTR CAA 90 bp | GATGCAGCCTCCTTCTACCTGAGAGCTAACAGGGAAATGGATTTGTCAGAGTGGGGGATATTCTCCTTGTaGATAAGCTCCTTGTCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: DAASFYLRANREMDLSEWGIFSL*ISSLSQ Trigger: TTGCGACAAGGAGCTTATCAACAAGGAGAATATCCC...CCACTCTGACAAATCCATTTCCCTGTTAGCTCTCAGGTAGAAGGAGGCTGCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS TCA 90 bp | CAAGTTGGTCCAGAAAGCAATGTGCACTGCAGTCTGTTTTCAAAGTaGCAGCAAAGTCTGGCTTTGTGGAGCTGTCATCTTCTGAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: QVGPESNVHCSLFSK*QQSLALWSCHLLNP Trigger: AGGGTTCAGAAGATGACAGCTCCACAAAGCCAGACTTTGCTGTCACTTTGAAAACAGACTGCAGTGCACATTGCTTTCTGGACCAACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
||
| CDS CCA 90 bp | ATAGAAGATGCTGAAGATGGTCCGGGTTCTGAGTCCTCTGAACTTTaGTCTCCAGCGTTGCTGACATCAAAAAGATGCTCTTCTACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: IEDAEDGPGSESSEL*SPALLTSKRCSSTA Trigger: AGCAGTAGAAGAGCATCTTTTTGATGTCAGCAACGCTGGAGACCAAAGTTCAGAGGACTCAGAACCCGGACCATCTTCAGCATCTTCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
||
| CDS GCA 90 bp | GAGTCCTCTGAACTTTGGTCTCCAGCGTTGCTGACATCAAAAAGATaGTCTTCTACTGCTGACCTGATGGTTCTTTCTAAGAGTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ESSELWSPALLTSKR*SSTADLMVLSKSSP Trigger: TGGAGAACTCTTAGAAAGAACCATCAGGTCAGCAGTAGAAGAGCATCTTTTTGATGTCAGCAACGCTGGAGACCAAAGTTCAGAGGACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
||
| CDS-3UTR CAA 90 bp | GTTTGTGCGAGGCCAATTAAGATGCTGCCTCTAGTGCTAGGAGATGAAGAGCTGCCTCTTTCAATTTCTTaGCTCTCAGAAGATAACGGT | + |
|
Preference number: 5 (lower is better) Translates to: VCARPIKMLPLVLGDEELPLSIS*LSEDNG Trigger: ACCGTTATCTTCTGAGAGCAAAGAAATTGAAAGAGG...CAGCTCTTCATCTCCTAGCACTAGAGGCAGCATCTTAATTGGCCTCGCACAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CAA 90 bp | AGAACACATCACAGGAATGACAGCAGGCACACAGAAGAGATGAATAATGGGGAGCTGATCTTCACCATCTaGATTCCTCTGCTGTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RTHHRNDSRHTEEMNNGELIFTI*IPLLFG Trigger: ACCAAACAGCAGAGGAATCAAGATGGTGAAGATCAG...CTCCCCATTATTCATCTCTTCTGTGTGCCTGCTGTCATTCCTGTGATGTGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CAA 90 bp | AGAACACATCACAGGAATGACAGCAGGCACACAGAAGAGATGAATAATGGGGAGTTAGCAATCTGGTCCTaGGTCATATCCTTAATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RTHHRNDSRHTEEMNNGELAIWS*VISLMS Trigger: GGACATTAAGGATATGACCAAGGACCAGATTGCTAA...CTCCCCATTATTCATCTCTTCTGTGTGCCTGCTGTCATTCCTGTGATGTGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CAA 90 bp | AGGTGTTGCATCAGAATGAGACAAAGTGGAAATTGCTCTCTGCTCCAGCCATGGTGTTCCTTTATCTCCTaGAAGAAGGAAGCAGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RCCIRMRQSGNCSLLQPWCSFIS*KKEAVS Trigger: TGAAACTGCTTCCTTCTTCAAGGAGATAAAGGAACA...CCATGGCTGGAGCAGAGAGCAATTTCCACTTTGTCTCATTCTGATGCAACACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS-3UTR CAA 90 bp | TTGGCTAGTGCAACAACAAAATTGAGCCCCAAACAGGTTATCATAGGAACACCGAGCATCATCTTCAAGTaGGTCCAGAAAGCAATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LASATTKLSPKQVIIGTPSIIFK*VQKAMC Trigger: GCACATTGCTTTCTGGACCAACTTGAAGATGATGCT...CGGTGTTCCTATGATAACCTGTTTGGGGCTCAATTTTGTTGTTGCACTAGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
||
| CDS CCA 90 bp | AGTTCAGGTATTGAAGCAGAGTGGAGGTTTGAAAGGCCTGAGTCCTaGCTGCATTTCGATGGCATTTTGTCATCCATTGGTGAAATAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SSGIEAEWRFERPES*LHFDGILSSIGEIN Trigger: ATTTATTTCACCAATGGATGACAAAATGCCATCGAAATGCAGCCAGGACTCAGGCCTTTCAAACCTCCACTCTGCTTCAATACCTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS-3UTR CAA 90 bp | TTTCACACAGCATTCTGTGATGCACATACTGTCGACACCATCTTACCAAAGATTGAGGGGATATTCTCCTaGTTGATAAGCTCCTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: FHTAFCDAHTVDTILPKIEGIFS*LISSLS Trigger: CGACAAGGAGCTTATCAACAAGGAGAATATCCCCTC...AATCTTTGGTAAGATGGTGTCGACAGTATGTGCATCACAGAATGCTGTGTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| CDS-3UTR CAA 90 bp | TTGGCTAGTGCAACAACAAAATTGAGCCCCAAACAGGTTATCATAGGAACACCGATGTGCTTGTATTCATaGTACTCTTCAGCCATTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LASATTKLSPKQVIIGTPMCLYS*YSSAIG Trigger: TCCAATGGCTGAAGAGTACAATGAATACAAGCACAT...CGGTGTTCCTATGATAACCTGTTTGGGGCTCAATTTTGTTGTTGCACTAGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| CDS-3UTR CAA 90 bp | TTGGCTAGTGCAACAACAAAATTGAGCCCCAAACAGGTTATCATAGGAACACCGCATTTCGATGGCATTTaGTCATCCATTGGTGAAATA | + |
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Preference number: 5 (lower is better) Translates to: LASATTKLSPKQVIIGTPHFDGI*SSIGEI Trigger: TATTTCACCAATGGATGACAAAATGCCATCGAAATG...CGGTGTTCCTATGATAACCTGTTTGGGGCTCAATTTTGTTGTTGCACTAGCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| CDS CCA 90 bp | TTGTCATCCATTGGTGAAATAAATCCATCAGCATCATCTTCAAGTTaGTCCAGAAAGCAATGTGCACTGCAGTCTGTTTTCAAAGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LSSIGEINPSASSSS*SRKQCALQSVFKVT Trigger: TGTCACTTTGAAAACAGACTGCAGTGCACATTGCTTTCTGGACCAACTTGAAGATGATGCTGATGGATTTATTTCACCAATGGATGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS-3UTR CAA 90 bp | TTTCACACAGCATTCTGTGATGCACATACTGTCGACACCATCTTACCAAAGATTCAGAGATCTTCAGTTTaGATTCTTTCAGCTGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FHTAFCDAHTVDTILPKIQRSSV*ILSAVS Trigger: GGAAACAGCTGAAAGAATCAAAACTGAAGATCTCTG...AATCTTTGGTAAGATGGTGTCGACAGTATGTGCATCACAGAATGCTGTGTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| CDS GCA 72 bp | CCCGGCCTGTGGGGAGAGGCGGGCTTCATCAGAGTCTaGATTCTCTGGCTGCCAGGAAGGAATGGGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: PGLWGEAGFIRV*ILWLPGRNGFF Trigger: GAAGAACCCATTCCTTCCTGGCAGCCAGAGAATGCAGACTCTGATGAAGCCCGCCTCTCCCCACAGGCCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CAA 90 bp | AAGGGTCTGGATCCTTCTGGTGAGCTGCACTGGTGTCAGGTCCTCTaGCTCGTCATCGTAGGACCCCAGGGAGGAGCTTCGCCGCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: KGLDPSGELHWCQVL*LVIVGPQGGASPPH Trigger: ATGAGGCGGCGAAGCTCCTCCCTGGGGTCCTACGATGACGAGCAAGAGGACCTGACACCAGTGCAGCTCACCAGAAGGATCCAGACCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CAA 72 bp | GATCCTTCTGGTGAGCTGCACTGGTGTCAGGTCCTCTaGCTCGTCATCGTAGGACCCCAGGGAGGAGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: DPSGELHWCQVL*LVIVGPQGGAS Trigger: CGAAGCTCCTCCCTGGGGTCCTACGATGACGAGCAAGAGGACCTGACACCAGTGCAGCTCACCAGAAGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CCA 72 bp | TTCATCCAGAAACTGGTGAATCAGGCGCCCGGCCTGTaGGGAGAGGCGGGCTTCATCAGAGTCTGCATTCTC | + |
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Preference number: 6 (lower is better) Translates to: FIQKLVNQAPGL*GEAGFIRVCIL Trigger: GAGAATGCAGACTCTGATGAAGCCCGCCTCTCCCCACAGGCCGGGCGCCTGATTCACCAGTTTCTGGATGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CCA 72 bp | TGGGGAGAGGCGGGCTTCATCAGAGTCTGCATTCTCTaGCTGCCAGGAAGGAATGGGTTCTTCCCAGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: WGEAGFIRVCIL*LPGRNGFFPGL Trigger: AAGACCTGGGAAGAACCCATTCCTTCCTGGCAGCCAGAGAATGCAGACTCTGATGAAGCCCGCCTCTCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CCA 72 bp | CCAGATACTGCCTGCTCTGCCCATAGGCATAGAACCTaGGGGACAGCATGGGGTCGCTGTCTTCATCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: PDTACSAHRHRT*GTAWGRCLHPE Trigger: TTCTGGATGAAGACAGCGACCCCATGCTGTCCCCCAGGTTCTATGCCTATGGGCAGAGCAGGCAGTATCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS TCA 72 bp | TGGAGCTGTCATCTTCTGAACCCTCCTCTTGTTCAATaGTGGGGACAGTGCTGGCCCGGGACAGGATCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: WSCHLLNPPLVQ*WGQCWPGTGSV Trigger: AACAGATCCTGTCCCGGGCCAGCACTGTCCCCATCATTGAACAAGAGGAGGGTTCAGAAGATGACAGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173193.2 |
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| CDS GCA 72 bp | GAGAAGGAGGCACTTCTGTATCATCCAGATACTGCCTaGTCTGCCCATAGGCATAGAACCTGGGGGACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: EKEALLYHPDTA*SAHRHRTWGTA Trigger: TGCTGTCCCCCAGGTTCTATGCCTATGGGCAGAGCAGGCAGTATCTGGATGATACAGAAGTGCCTCCTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CCA 72 bp | TGCTCTGCCCATAGGCATAGAACCTGGGGGACAGCATaGGGTCGCTGTCTTCATCCAGAAACTGGTGAATCA | + |
|
Preference number: 6 (lower is better) Translates to: CSAHRHRTWGTA*GRCLHPETGES Trigger: TGATTCACCAGTTTCTGGATGAAGACAGCGACCCCATGCTGTCCCCCAGGTTCTATGCCTATGGGCAGAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS GCA 72 bp | TTGAAGAAGGAAGCAGTTTCACCCTCGATAATCGGCTaGAGCGAAGGGCTTCTCCTTTTGCTGGAGGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LKKEAVSPSIIG*SEGLLLLLEGE Trigger: TTCCCCCTCCAGCAAAAGGAGAAGCCCTTCGCTGCAGCCGATTATCGAGGGTGAAACTGCTTCCTTCTTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| CDS CCA 72 bp | CATCAGAGTCTGCATTCTCTGGCTGCCAGGAAGGAATaGGTTCTTCCCAGGTCTTCTCATCGCACAATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HQSLHSLAARKE*VLPRSSHRTML Trigger: CAGCATTGTGCGATGAGAAGACCTGGGAAGAACCCATTCCTTCCTGGCAGCCAGAGAATGCAGACTCTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CCA 72 bp | CTGTCCTCGAACTTCCGGATCTTCTTTTTAAGGGTCTaGATCCTTCTGGTGAGCTGCACTGGTGTCAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LSSNFRIFFLRV*ILLVSCTGVRS Trigger: GGACCTGACACCAGTGCAGCTCACCAGAAGGATCCAGACCCTTAAAAAGAAGATCCGGAAGTTCGAGGACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CAA 72 bp | CGGTTCAGCAGCTTCAGGTTCCAGTGTTTCTTGAGATaGCATGGAACTGAGACTTTCCATGCTCAGGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RFSSFRFQCFLR*HGTETFHAQGP Trigger: GGGGCCCTGAGCATGGAAAGTCTCAGTTCCATGCAATCTCAAGAAACACTGGAACCTGAAGCTGCTGAACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CAA 72 bp | ATGATGGGGACAGTGCTGGCCCGGGACAGGATCTGTTaGACTAGTCGGTACCGATCATACAGTGGCTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: MMGTVLARDRIC*TSRYRSYSGFI Trigger: AATGAAGCCACTGTATGATCGGTACCGACTAGTCAAACAGATCCTGTCCCGGGCCAGCACTGTCCCCATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CAA 90 bp | ATGCACTCAGCACAGCCGCTGAAGCCAGAGGGGATATTCTCCTTGTaGATAAGCTCCTTGTCGCAACCATGCCAGACATCATCCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: MHSAQPLKPEGIFSL*ISSLSQPCQTSSCF Trigger: GAAGCAGGATGATGTCTGGCATGGTTGCGACAAGGAGCTTATCAACAAGGAGAATATCCCCTCTGGCTTCAGCGGCTGTGCTGAGTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CAA 90 bp | AAGATGCACTCAGCACAGCCGCTGAAGCCAGAGGGGATATTCTCCTaGTTGATAAGCTCCTTGTCGCAACCATGCCAGACATCATCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KMHSAQPLKPEGIFS*LISSLSQPCQTSSC Trigger: GCAGGATGATGTCTGGCATGGTTGCGACAAGGAGCTTATCAACAAGGAGAATATCCCCTCTGGCTTCAGCGGCTGTGCTGAGTGCATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CAA 90 bp | GTCGGTACCGATCATACAGTGGCTTCATTATCTGACGCTCAGTCTTaGTCACCGGCCGCCCATGGATACTTTCGTAGTATAGCAGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VGTDHTVASLSDAQS*SPAAHGYFRSIAGL Trigger: AAGCCCTGCTATACTACGAAAGTATCCATGGGCGGCCGGTGACAAAGACTGAGCGTCAGATAATGAAGCCACTGTATGATCGGTACCGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS TCA 72 bp | ACTAGTCGGTACCGATCATACAGTGGCTTCATTATCTaGCGCTCAGTCTTTGTCACCGGCCGCCCATGGATA | + |
|
Preference number: 6 (lower is better) Translates to: TSRYRSYSGFII*RSVFVTGRPWI Trigger: TATCCATGGGCGGCCGGTGACAAAGACTGAGCGTCAGATAATGAAGCCACTGTATGATCGGTACCGACTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CCA 72 bp | TGTCAGATAGACTGGGATGCTCCTGAATCTTCATCGTaGGGTTCTCACAATGCTGAGTGTCTCTACCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: CQIDWDAPESSS*GSHNAECLYRL Trigger: GAGGCGGTAGAGACACTCAGCATTGTGAGAACCCCACGATGAAGATTCAGGAGCATCCCAGTCTATCTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CCA 72 bp | ATCGCACAATGCTGTCAGGTCCAACTGGGGCATATCTaGGACAAAGCTCTCCTGCTGATCTTCACCATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: IAQCCQVQLGHI*DKALLLIFTIL Trigger: CAAGATGGTGAAGATCAGCAGGAGAGCTTTGTCCCAGATATGCCCCAGTTGGACCTGACAGCATTGTGCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS TCA 72 bp | TCGCAACCATGCCAGACATCATCCTGCTTCTTAAATTaGTGCCCTCGCTGCCTGGTGGGTATAGAAGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: SQPCQTSSCFLN*CPRCLVGIEDA Trigger: AGCATCTTCTATACCCACCAGGCAGCGAGGGCATCAATTTAAGAAGCAGGATGATGTCTGGCATGGTTGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS TCA 72 bp | GACAGCAAAGTCTGGCTTTGTGGAGCTGTCATCTTCTaGACCCTCCTCTTGTTCAATGATGGGGACAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: DSKVWLCGAVIF*TLLLFNDGDSA Trigger: AGCACTGTCCCCATCATTGAACAAGAGGAGGGTTCAGAAGATGACAGCTCCACAAAGCCAGACTTTGCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173193.2 |
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| CDS GCA 72 bp | CCCAACGTAGTCACAAATATCGTCCTGGAATCTTTCTaGTTCCTGGCTGTTCAAGATGCACTCAGCACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PNVVTNIVLESF*FLAVQDALSTA Trigger: GGCTGTGCTGAGTGCATCTTGAACAGCCAGGAAGCAGAAAGATTCCAGGACGATATTTGTGACTACGTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CCA 72 bp | GCTGAAGATGGTCCGGGTTCTGAGTCCTCTGAACTTTaGTCTCCAGCGTTGCTGACATCAAAAAGATGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: AEDGPGSESSEL*SPALLTSKRCS Trigger: AGAGCATCTTTTTGATGTCAGCAACGCTGGAGACCAAAGTTCAGAGGACTCAGAACCCGGACCATCTTCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CAA 72 bp | CCGGGTTCTGAGTCCTCTGAACTTTGGTCTCCAGCGTaGCTGACATCAAAAAGATGCTCTTCTACTGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: PGSESSELWSPA*LTSKRCSSTAD Trigger: GTCAGCAGTAGAAGAGCATCTTTTTGATGTCAGCAACGCTGGAGACCAAAGTTCAGAGGACTCAGAACCCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CAA 90 bp | GAAGATGGTCCGGGTTCTGAGTCCTCTGAACTTTGGTCTCCAGCGTaGCTGACATCAAAAAGATGCTCTTCTACTGCTGACCTGATGGTT | + |
|
Preference number: 6 (lower is better) Translates to: EDGPGSESSELWSPA*LTSKRCSSTADLMV Trigger: AACCATCAGGTCAGCAGTAGAAGAGCATCTTTTTGATGTCAGCAACGCTGGAGACCAAAGTTCAGAGGACTCAGAACCCGGACCATCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CAA 90 bp | GTGGAGCTGTCATCTTCTGAACCCTCCTCTTGTTCCTTTATCTCCTaGAAGAAGGAAGCAGTTTCACCCTCGATAATCGGCTGCAGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: VELSSSEPSSCSFIS*KKEAVSPSIIGCSE Trigger: TTCGCTGCAGCCGATTATCGAGGGTGAAACTGCTTCCTTCTTCAAGGAGATAAAGGAACAAGAGGAGGGTTCAGAAGATGACAGCTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| CDS GCA 72 bp | TGGCAAGCCTGGAACTGGATTTCTGACGCTTGGGTTTaGTTCTTTCCCCAACGTAGTCACAAATATCGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: WQAWNWISDAWV*FFPQRSHKYRP Trigger: AGGACGATATTTGTGACTACGTTGGGGAAAGAAGCAAACCCAAGCGTCAGAAATCCAGTTCCAGGCTTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CAA 72 bp | ATTCCAAGAGTTCAGGTATTGAAGCAGAGTGGAGGTTaGAAAGGCCTGAGTCCTGGCTGCATTTCGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: IPRVQVLKQSGG*KGLSPGCISMA Trigger: TGCCATCGAAATGCAGCCAGGACTCAGGCCTTTCAAACCTCCACTCTGCTTCAATACCTGAACTCTTGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CAA 90 bp | CCTGAAGGTATTCCAAGAGTTCAGGTATTGAAGCAGAGTGGAGGTTaGAAAGGCCTGAGTCCTGGCTGCATTTCGATGGCATTTTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: PEGIPRVQVLKQSGG*KGLSPGCISMAFCH Trigger: ATGACAAAATGCCATCGAAATGCAGCCAGGACTCAGGCCTTTCAAACCTCCACTCTGCTTCAATACCTGAACTCTTGGAATACCTTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS GCA 72 bp | AAGCAGAGTGGAGGTTTGAAAGGCCTGAGTCCTGGCTaGATTTCGATGGCATTTTGTCATCCATTGGTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: KQSGGLKGLSPG*ISMAFCHPLVK Trigger: TTTCACCAATGGATGACAAAATGCCATCGAAATGCAGCCAGGACTCAGGCCTTTCAAACCTCCACTCTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS TCA 72 bp | GACAGCAAAGTCTGGCTTTGTGGAGCTGTCATCTTCTaGACCCTCCTCTTGTTCCTTTATCTCCTTGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: DSKVWLCGAVIF*TLLLFLYLLEE Trigger: TTCTTCAAGGAGATAAAGGAACAAGAGGAGGGTTCAGAAGATGACAGCTCCACAAAGCCAGACTTTGCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089860.12 |
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| CDS CAA 72 bp | CTCTCATTTCCTGAAGGTATTCCAAGAGTTCAGGTATaGAAGCAGAGTGGAGGTTTGAAAGGCCTGAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LSFPEGIPRVQV*KQSGGLKGLSP Trigger: AGGACTCAGGCCTTTCAAACCTCCACTCTGCTTCAATACCTGAACTCTTGGAATACCTTCAGGAAATGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CAA 72 bp | AGCACCTCCAGCAAACGTAGCTTTGCCTTTATGTGCTaGTATTCATTGTACTCTTCAGCCATTGGAGTACGG | + |
|
Preference number: 6 (lower is better) Translates to: STSSKRSFAFMC*YSLYSSAIGVR Trigger: CCGTACTCCAATGGCTGAAGAGTACAATGAATACAAGCACATAAAGGCAAAGCTACGTTTGCTGGAGGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS GCA 72 bp | AATGCTGAGTGTCTCTACCGCCTCTTTCAATTTCTTTaGTCTCAGAAGATAACGGTTCAGCAGCTTCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: NAECLYRLFQFL*SQKITVQQLQV Trigger: AACCTGAAGCTGCTGAACCGTTATCTTCTGAGAGCAAAGAAATTGAAAGAGGCGGTAGAGACACTCAGCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CAA 72 bp | GAAAGGCCTGAGTCCTGGCTGCATTTCGATGGCATTTaGTCATCCATTGGTGAAATAAATCCATCAGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: ERPESWLHFDGI*SSIGEINPSAS Trigger: TGATGCTGATGGATTTATTTCACCAATGGATGACAAAATGCCATCGAAATGCAGCCAGGACTCAGGCCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS CAA 90 bp | TGGAGGTTTGAAAGGCCTGAGTCCTGGCTGCATTTCGATGGCATTTaGTCATCCATTGGTGAAATAAATCCATCAGCATCATCTTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: WRFERPESWLHFDGI*SSIGEINPSASSSS Trigger: ACTTGAAGATGATGCTGATGGATTTATTTCACCAATGGATGACAAAATGCCATCGAAATGCAGCCAGGACTCAGGCCTTTCAAACCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS TCA 72 bp | CTGGCTGCATTTCGATGGCATTTTGTCATCCATTGGTaGAATAAATCCATCAGCATCATCTTCAAGTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LAAFRWHFVIHW*NKSISIIFKLV Trigger: GACCAACTTGAAGATGATGCTGATGGATTTATTTCACCAATGGATGACAAAATGCCATCGAAATGCAGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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| CDS TCA 72 bp | TTCTTTCTAAGAGTTCTCCAGTTGTTGAAACATTGCTaGCTTGGGATACATGAGCACTCAGATAGAAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: FFLRVLQLLKHC*LGIHEHSDRKV Trigger: CACCTTTCTATCTGAGTGCTCATGTATCCCAAGTCAGCAATGTTTCAACAACTGGAGAACTCTTAGAAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089860.12 ENSMUST00000173193.2 |
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