Pregenerated sensors for FAM136A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057497Ensembl transcript IDs: ENSMUST00000071492.9, ENSMUST00000204893.2
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTTCTCTGAGGAGATGCACCGATCCTCAGATTTTACCAGCAGGTTaGAGAGAGCTGCCAGCCTGGATGTTTGTAGTAAGAAGCTCAGCT | + |
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Preference number: 1 (lower is better) Translates to: ASLRRCTDPQILPAG*RELPAWMFVVRSSA Trigger: AGCTGAGCTTCTTACTACAAACATCCAGGCTGGCAGCTCTCTTCAACCTGCTGGTAAAATCTGAGGATCGGTGCATCTCCTCAGAGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR GCA 90 bp | AATAAAAACCACCCAGGCAAAAATGGCATTTGGCAAGAAAGTGTGTaGCTCTCTTGTTCTACAGTGGTCCTACCCATCTGTGGCCCAAGT | + |
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Preference number: 1 (lower is better) Translates to: NKNHPGKNGIWQESV*LSCSTVVLPICGPS Trigger: ACTTGGGCCACAGATGGGTAGGACCACTGTAGAACAAGAGAGGCACACACTTTCTTGCCAAATGCCATTTTTGCCTGGGTGGTTTTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR TCA 90 bp | CTTCACCTTCTAAGATCCGAATGTAAAGGGACTAGTGTCCAGCAGTaGGCAGCATTTGCCTGGAACTTGCTGTGTCTAAGTTTTCCTCAT | + |
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Preference number: 1 (lower is better) Translates to: LHLLRSECKGTSVQQ*AAFAWNLLCLSFPH Trigger: ATGAGGAAAACTTAGACACAGCAAGTTCCAGGCAAATGCTGCTCACTGCTGGACACTAGTCCCTTTACATTCGGATCTTAGAAGGTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR TCA 90 bp | GTACAGACACTTGCATATGAATATTTAGGATCTAGACTTCTCCTCTaGGCTATCTGTGATCCAAATCTTAGCACCAGCTTCTTCCTACTT | + |
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Preference number: 1 (lower is better) Translates to: VQTLAYEYLGSRLLL*AICDPNLSTSFFLL Trigger: AAGTAGGAAGAAGCTGGTGCTAAGATTTGGATCACAGATAGCTCAGAGGAGAAGTCTAGATCCTAAATATTCATATGCAAGTGTCTGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR-3UTR TCA 90 bp | GCAGCGGGCCAGGCGGTCCCAGGGCTTCTTCCAGAATATCAACCCTCACGGACAGGCTCCCACCAGTGTTaGCAGGACCTAAGGCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: AAGQAVPGLLPEYQPSRTGSHQC*QDLRQN Trigger: GTTCTGCCTTAGGTCCTGTCAACACTGGTGGGAGCC...TGTCCGTGAGGGTTGATATTCTGGAAGAAGCCCTGGGACCGCCTGGCCCGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204893.2 |
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| 3UTR CAA 90 bp | CTTCCAGAATATCAACCCTCACGGACACCAGGGCTCCCACCAGTGTaGACAGGACCTAAGGCAGAACGAGTGTTTCTCATCCCCTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: LPEYQPSRTPGLPPV*TGPKAERVFLIPCQ Trigger: TTGGCAGGGGATGAGAAACACTCGTTCTGCCTTAGGTCCTGTCAACACTGGTGGGAGCCCTGGTGTCCGTGAGGGTTGATATTCTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204893.2 |
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| 3UTR CAA 90 bp | AGCTTCTCTGAGGAGATGCACCGATCCTCAGATTTTACCAGCAGGTaGAAGAGAGCTGCCAGCCTGGATGTTTGTAGTAAGAAGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: SFSEEMHRSSDFTSR*KRAASLDVCSKKLS Trigger: GCTGAGCTTCTTACTACAAACATCCAGGCTGGCAGCTCTCTTCAACCTGCTGGTAAAATCTGAGGATCGGTGCATCTCCTCAGAGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR-3UTR TCA 90 bp | AAAACCACCCAGGCAAAAATGGCATTTGGCAAGAAAGTGTGTGCCTCTCTTGTTACTAGTGTCCAGCAGTaGGCAGCATTTGCCTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: KTTQAKMAFGKKVCASLVTSVQQ*AAFAWN Trigger: GTTCCAGGCAAATGCTGCTCACTGCTGGACACTAGT...AACAAGAGAGGCACACACTTTCTTGCCAAATGCCATTTTTGCCTGGGTGGTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR CAA 90 bp | CCAGCATATGCAAGGTGGTGTGATGATACTTCTGGTCAACAGGATTaGTCAAGCTTCTCTGAGGAGATGCACCGATCCTCAGATTTTACC | + |
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Preference number: 2 (lower is better) Translates to: PAYARWCDDTSGQQD*SSFSEEMHRSSDFT Trigger: GGTAAAATCTGAGGATCGGTGCATCTCCTCAGAGAAGCTTGACAAATCCTGTTGACCAGAAGTATCATCACACCACCTTGCATATGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR-3UTR GCA 90 bp | AAAACCACCCAGGCAAAAATGGCATTTGGCAAGAAAGTGTGTGCCTCTCTTGTTGCAGTGAGCAGCATTTaGCTGGAACTTGCTGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: KTTQAKMAFGKKVCASLVAVSSI*LELAVS Trigger: AGACACAGCAAGTTCCAGGCAAATGCTGCTCACTGC...AACAAGAGAGGCACACACTTTCTTGCCAAATGCCATTTTTGCCTGGGTGGTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR-3UTR CCA 90 bp | AGGATTTGTCAAGCTTCTCTGAGGAGATGCACCGATCCTCAGATTTTACCAGCAAGAGAGCTGCCAGCCTaGATGTTTGTAGTAAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: RICQASLRRCTDPQILPARELPA*MFVVRS Trigger: GCTTCTTACTACAAACATCCAGGCTGGCAGCTCTCT...TGCTGGTAAAATCTGAGGATCGGTGCATCTCCTCAGAGAAGCTTGACAAATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR-3UTR TCA 90 bp | AGGATTTGTCAAGCTTCTCTGAGGAGATGCACCGATCCTCAGATTTTACCAGCACTCTTGGTACAAGGTTaGTCTCTACTACAGTACAGA | + |
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Preference number: 2 (lower is better) Translates to: RICQASLRRCTDPQILPALLVQG*SLLQYR Trigger: TCTGTACTGTAGTAGAGATCAACCTTGTACCAAGAG...TGCTGGTAAAATCTGAGGATCGGTGCATCTCCTCAGAGAAGCTTGACAAATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR-3UTR CCA 90 bp | AAAACCACCCAGGCAAAAATGGCATTTGGCAAGAAAGTGTGTGCCTCTCTTGTTCCAGCATATGCAAGGTaGTGTGATGATACTTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: KTTQAKMAFGKKVCASLVPAYAR*CDDTSG Trigger: ACCAGAAGTATCATCACACCACCTTGCATATGCTGG...AACAAGAGAGGCACACACTTTCTTGCCAAATGCCATTTTTGCCTGGGTGGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR CAA 90 bp | CCAGCCTGGATGTTTGTAGTAAGAAGCTCAGCTCTTGGTACAAGGTaGATCTCTACTACAGTACAGACACTTGCATATGAATATTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: PAWMFVVRSSALGTR*ISTTVQTLAYEYLG Trigger: TCCTAAATATTCATATGCAAGTGTCTGTACTGTAGTAGAGATCAACCTTGTACCAAGAGCTGAGCTTCTTACTACAAACATCCAGGCTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTCTTGGTACAAGGTTGATCTCTACTACAGTACAGACACTTGCATATGAATCTAGACTTCTCCTCTaGGCTATCTGTGATCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: SALGTRLISTTVQTLAYESRLLL*AICDPN Trigger: ATTTGGATCACAGATAGCTCAGAGGAGAAGTCTAGA...TTCATATGCAAGTGTCTGTACTGTAGTAGAGATCAACCTTGTACCAAGAGCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR-3UTR GCA 90 bp | AAAACCACCCAGGCAAAAATGGCATTTGGCAAGAAAGTGTGTGCCTCTCTTGTTATCATAAATCCAGTGTaGCCTGCATATAAGACAAAA | + |
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Preference number: 2 (lower is better) Translates to: KTTQAKMAFGKKVCASLVIINPV*PAYKTK Trigger: TTTTGTCTTATATGCAGGGCACACTGGATTTATGAT...AACAAGAGAGGCACACACTTTCTTGCCAAATGCCATTTTTGCCTGGGTGGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR-3UTR GCA 90 bp | AAATATATTGCAGGCTTGACACAGCAAAAAGACAGATGTATCACTGTTTCAAGTATAATTCCTAGTTACTaGTTATTCTTAGCGACTGGC | + |
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Preference number: 2 (lower is better) Translates to: KYIAGLTQQKDRCITVSSIIPSY*LFLATG Trigger: GCCAGTCGCTAAGAATAAGCAGTAACTAGGAATTAT...ACTTGAAACAGTGATACATCTGTCTTTTTGCTGTGTCAAGCCTGCAATATATTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR TCA 72 bp | ATCAACCCTCACGGACACCAGGGCTCCCACCAGTGTTaGCAGGACCTAAGGCAGAACGAGTGTTTCTCATCC | + |
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Preference number: 3 (lower is better) Translates to: INPHGHQGSHQC*QDLRQNECFSS Trigger: GGATGAGAAACACTCGTTCTGCCTTAGGTCCTGTCAACACTGGTGGGAGCCCTGGTGTCCGTGAGGGTTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204893.2 |
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| 3UTR GCA 72 bp | TGTTCTACAGTGGTCCTACCCATCTGTGGCCCAAGTTaGTCAGTTTCTGGCTTTCTTGTTGCTATAAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: CSTVVLPICGPS*SVSGFLVAIRL Trigger: GAGCCTTATAGCAACAAGAAAGCCAGAAACTGAGCAACTTGGGCCACAGATGGGTAGGACCACTGTAGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR GCA 72 bp | CACCCAGGCAAAAATGGCATTTGGCAAGAAAGTGTGTaGCTCTCTTGTTCTACAGTGGTCCTACCCATCTGT | + |
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Preference number: 3 (lower is better) Translates to: HPGKNGIWQESV*LSCSTVVLPIC Trigger: ACAGATGGGTAGGACCACTGTAGAACAAGAGAGGCACACACTTTCTTGCCAAATGCCATTTTTGCCTGGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR-3UTR CAA 90 bp | AAAACCACCCAGGCAAAAATGGCATTTGGCAAGAAAGTGTGTGCCTCTCTTGTTAGCAGTGAGCAGCATTaGCCTGGAACTTGCTGTGTC | + |
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Preference number: 3 (lower is better) Translates to: KTTQAKMAFGKKVCASLVSSEQH*PGTCCV Trigger: GACACAGCAAGTTCCAGGCAAATGCTGCTCACTGCT...AACAAGAGAGGCACACACTTTCTTGCCAAATGCCATTTTTGCCTGGGTGGTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR-3UTR CAA 90 bp | AAAACCACCCAGGCAAAAATGGCATTTGGCAAGAAAGTGTGTGCCTCTCTTGTTGATTTTACCAGCAGGTaGAAGAGAGCTGCCAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: KTTQAKMAFGKKVCASLVDFTSR*KRAASL Trigger: CAGGCTGGCAGCTCTCTTCAACCTGCTGGTAAAATC...AACAAGAGAGGCACACACTTTCTTGCCAAATGCCATTTTTGCCTGGGTGGTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR TCA 72 bp | CTAAGATCCGAATGTAAAGGGACTAGTGTCCAGCAGTaGGCAGCATTTGCCTGGAACTTGCTGTGTCTAAGT | + |
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Preference number: 3 (lower is better) Translates to: LRSECKGTSVQQ*AAFAWNLLCLS Trigger: ACTTAGACACAGCAAGTTCCAGGCAAATGCTGCTCACTGCTGGACACTAGTCCCTTTACATTCGGATCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR-3UTR CAA 90 bp | AGGATTTGTCAAGCTTCTCTGAGGAGATGCACCGATCCTCAGATTTTACCAGCAGCATTTGCCTGGAACTaGCTGTGTCTAAGTTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: RICQASLRRCTDPQILPAAFAWN*LCLSFP Trigger: AGGAAAACTTAGACACAGCAAGTTCCAGGCAAATGC...TGCTGGTAAAATCTGAGGATCGGTGCATCTCCTCAGAGAAGCTTGACAAATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR TCA 72 bp | ATTCCTAGTTACTGCTTATTCTTAGCGACTGGCATGTaGGTGACAGCCTACCCCCTTGCTTTTCATAAGGAT | + |
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Preference number: 3 (lower is better) Translates to: IPSYCLFLATGM*VTAYPLAFHKD Trigger: ATCCTTATGAAAAGCAAGGGGGTAGGCTGTCACTCACATGCCAGTCGCTAAGAATAAGCAGTAACTAGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR TCA 72 bp | CTTGCATATGAATATTTAGGATCTAGACTTCTCCTCTaGGCTATCTGTGATCCAAATCTTAGCACCAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: LAYEYLGSRLLL*AICDPNLSTSF Trigger: GAAGCTGGTGCTAAGATTTGGATCACAGATAGCTCAGAGGAGAAGTCTAGATCCTAAATATTCATATGCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR GCA 72 bp | TATAAATACAACATAGTACTTATCCAAAAGATAAGGTaGTATGTTGGGCCAGCAACACTGCACTGCAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: YKYNIVLIQKIR*YVGPATLHCKE Trigger: TTCTTTGCAGTGCAGTGTTGCTGGCCCAACATAGCACCTTATCTTTTGGATAAGTACTATGTTGTATTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| CDS-3UTR GCA 90 bp | GCAGCGGGCCAGGCGGTCCCAGGGCTTCTTCCAGAATATCAACCCTCACGGACAGCGTCCACAGCCTCCTaGACTCGGAGTTGCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: AAGQAVPGLLPEYQPSRTASTAS*TRSCCT Trigger: GGTGCAGCAACTCCGAGTGCAGGAGGCTGTGGACGC...TGTCCGTGAGGGTTGATATTCTGGAAGAAGCCCTGGGACCGCCTGGCCCGCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204893.2 |
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| CDS-3UTR TCA 90 bp | GCAGCGGGCCAGGCGGTCCCAGGGCTTCTTCCAGAATATCAACCCTCACGGACAGCTGTGAGGCATTCCTaGCCTGGAACCTTTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: AAGQAVPGLLPEYQPSRTAVRHS*PGTFPA Trigger: AGCTGGAAAGGTTCCAGGTCAGGAATGCCTCACAGC...TGTCCGTGAGGGTTGATATTCTGGAAGAAGCCCTGGGACCGCCTGGCCCGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204893.2 |
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| CDS-3UTR CCA 90 bp | CTCCCACCAGTGTTGACAGGACCTAAGGCAGAACGAGTGTTTCTCATCCCCTGCGAGGCATTCCTGACCTaGAACCTTTCCAGCTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: LPPVLTGPKAERVFLIPCEAFLT*NLSSSL Trigger: CAGCGAGCTGGAAAGGTTCCAGGTCAGGAATGCCTC...GCAGGGGATGAGAAACACTCGTTCTGCCTTAGGTCCTGTCAACACTGGTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204893.2 |
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| CDS-3UTR GCA 90 bp | TCAGCTCTTGGTACAAGGTTGATCTCTACTACAGTACAGACACTTGCATATGAAGCGTCCACAGCCTCCTaGACTCGGAGTTGCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: SALGTRLISTTVQTLAYEASTAS*TRSCCT Trigger: GGTGCAGCAACTCCGAGTGCAGGAGGCTGTGGACGC...TTCATATGCAAGTGTCTGTACTGTAGTAGAGATCAACCTTGTACCAAGAGCTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR CAA 72 bp | GAGGAGATGCACCGATCCTCAGATTTTACCAGCAGGTaGAAGAGAGCTGCCAGCCTGGATGTTTGTAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: EEMHRSSDFTSR*KRAASLDVCSK Trigger: CTTACTACAAACATCCAGGCTGGCAGCTCTCTTCAACCTGCTGGTAAAATCTGAGGATCGGTGCATCTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR CAA 72 bp | GCAAGGTGGTGTGATGATACTTCTGGTCAACAGGATTaGTCAAGCTTCTCTGAGGAGATGCACCGATCCTCA | + |
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Preference number: 4 (lower is better) Translates to: ARWCDDTSGQQD*SSFSEEMHRSS Trigger: TGAGGATCGGTGCATCTCCTCAGAGAAGCTTGACAAATCCTGTTGACCAGAAGTATCATCACACCACCTTGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR CAA 72 bp | TTGTTCTACAGTGGTCCTACCCATCTGTGGCCCAAGTaGCTCAGTTTCTGGCTTTCTTGTTGCTATAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LFYSGPTHLWPK*LSFWLSCCYKA Trigger: AGCCTTATAGCAACAAGAAAGCCAGAAACTGAGCAACTTGGGCCACAGATGGGTAGGACCACTGTAGAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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| 3UTR CAA 72 bp | ATGTTTGTAGTAAGAAGCTCAGCTCTTGGTACAAGGTaGATCTCTACTACAGTACAGACACTTGCATATGAA | + |
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Preference number: 4 (lower is better) Translates to: MFVVRSSALGTR*ISTTVQTLAYE Trigger: TTCATATGCAAGTGTCTGTACTGTAGTAGAGATCAACCTTGTACCAAGAGCTGAGCTTCTTACTACAAACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071492.9 |
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