RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM135B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000036800

Ensembl transcript IDs: ENSMUST00000022953.10, ENSMUST00000229189.2

Found 498 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGCTCATGGAGTCCATCTCTGTGGGAACTAGGATCCAGGAGAGATaGGGGAGGCAGTCACCAACGCTGGGGAAACAGACTCCTGAGACT +
Preference number: 1 (lower is better)
Translates to: WLMESISVGTRIQER*GRQSPTLGKQTPET
Trigger: AGTCTCAGGAGTCTGTTTCCCCAGCGTTGGTGACTGCCTCCCTCATCTCTCCTGGATCCTAGTTCCCACAGAGATGGACTCCATGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 90 bp GGAGAATTTCAGAAACCAGCTCTGTTCTGGCCTTGTTATCTCCTCTaGCCAGGAGTCCCAGGAGCTGATGCAGTGCTGGAGCTACCCTTC +
Preference number: 1 (lower is better)
Translates to: GEFQKPALFWPCYLL*PGVPGADAVLELPF
Trigger: GAAGGGTAGCTCCAGCACTGCATCAGCTCCTGGGACTCCTGGTCAGAGGAGATAACAAGGCCAGAACAGAGCTGGTTTCTGAAATTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 90 bp TCCAGGCTTGGAGAGCCCTCTGCAGGTCATGGGTGGCCATGCCTCTaGTACCTACTTGGTACTAGGCATGTGAAGTCCAGAGAAACTACT +
Preference number: 1 (lower is better)
Translates to: SRLGEPSAGHGWPCL*YLLGTRHVKSRETT
Trigger: AGTAGTTTCTCTGGACTTCACATGCCTAGTACCAAGTAGGTATCAGAGGCATGGCCACCCATGACCTGCAGAGGGCTCTCCAAGCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 90 bp GGAGATGAATGTCTGCAAGAGACACGGGACCGTTCTGCTCCTCATTaGCTCATGGAGTCCATCTCTGTGGGAACTAGGATCCAGGAGAGA +
Preference number: 1 (lower is better)
Translates to: GDECLQETRDRSAPH*LMESISVGTRIQER
Trigger: TCTCTCCTGGATCCTAGTTCCCACAGAGATGGACTCCATGAGCCAATGAGGAGCAGAACGGTCCCGTGTCTCTTGCAGACATTCATCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 90 bp ACCCGGAAATCCCTGGATCTTTGTCAACAACCCTACAAAGCCCCATaGCAGCAAATACACTCCATCCCCAGTGTGCCTGAGATCCTCACA +
Preference number: 1 (lower is better)
Translates to: TRKSLDLCQQPYKAP*QQIHSIPSVPEILT
Trigger: TGTGAGGATCTCAGGCACACTGGGGATGGAGTGTATTTGCTGGCATGGGGCTTTGTAGGGTTGTTGACAAAGATCCAGGGATTTCCGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 90 bp CAGCAACTGTATGCTATGTCCTATTCCCCAGCCAGATCCTCTTGGTaGCCATCTAGGGGGTTTCTTAACTGTAATGTCGGGAACACCAGA +
Preference number: 1 (lower is better)
Translates to: QQLYAMSYSPARSSW*PSRGFLNCNVGNTR
Trigger: TCTGGTGTTCCCGACATTACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGACATAGCATACAGTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 90 bp TTCCAGCAACTGTATGCTATGTCCTATTCCCCAGCCAGATCCTCTTaGTGCCCATCTAGGGGGTTTCTTAACTGTAATGTCGGGAACACC +
Preference number: 1 (lower is better)
Translates to: FQQLYAMSYSPARSS*CPSRGFLNCNVGNT
Trigger: GGTGTTCCCGACATTACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGACATAGCATACAGTTGCTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 90 bp CTCCATCTCTACTCACTGTTTCTCCATCCTCCACCCGGAAATCCCTaGATCTTTGTCAACAACCCTACAAAGCCCCATGCCAGCAAATAC +
Preference number: 1 (lower is better)
Translates to: LHLYSLFLHPPPGNP*IFVNNPTKPHASKY
Trigger: GTATTTGCTGGCATGGGGCTTTGTAGGGTTGTTGACAAAGATCCAGGGATTTCCGGGTGGAGGATGGAGAAACAGTGAGTAGAGATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 90 bp AAGAAGAAAAGACAACCAGGAGACAGAGGGATGGACCAACATAAGTaGTCTGCCAGTCATGGAACACTCCAACTATCCCCCAGCTGCTCT +
Preference number: 1 (lower is better)
Translates to: KKKRQPGDRGMDQHK*SASHGTLQLSPSCS
Trigger: AGAGCAGCTGGGGGATAGTTGGAGTGTTCCATGACTGGCAGATCACTTATGTTGGTCCATCCCTCTGTCTCCTGGTTGTCTTTTCTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 90 bp GGCCACATAGGGCTTACAAAGACAGCAGGACACCTAAAAGAGGTGTaGCATGACGCTGGACAGTTATTGCCTTTAGTTCTCACTATGTCC +
Preference number: 1 (lower is better)
Translates to: GHIGLTKTAGHLKEV*HDAGQLLPLVLTMS
Trigger: GGACATAGTGAGAACTAAAGGCAATAACTGTCCAGCGTCATGGCACACCTCTTTTAGGTGTCCTGCTGTCTTTGTAAGCCCTATGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 90 bp CGGCTGGTGGGAGAACTGAGGCTTCAGAAGCAGCCAAACATTGCATaGTATCATGGGGTGAAGATGAAGAATTCATCCAGTGTGAACTCA +
Preference number: 1 (lower is better)
Translates to: RLVGELRLQKQPNIA*YHGVKMKNSSSVNS
Trigger: TGAGTTCACACTGGATGAATTCTTCATCTTCACCCCATGATAGCATGCAATGTTTGGCTGCTTCTGAAGCCTCAGTTCTCCCACCAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 90 bp GATGCTCTGGAGGCTTTGGGATATGCTGTAAGTTTTCTAATTCTCTaGTTAGAGACTCCAGGCTCTGTGGCATGGGGAGTGGAAGCAAAG +
Preference number: 1 (lower is better)
Translates to: DALEALGYAVSFLIL*LETPGSVAWGVEAK
Trigger: CTTTGCTTCCACTCCCCATGCCACAGAGCCTGGAGTCTCTAACCAGAGAATTAGAAAACTTACAGCATATCCCAAAGCCTCCAGAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 90 bp CAGACAGAGGACAGTAGCTCAGGATGCTCTGGAGGCTTTGGGATATaGTGTAAGTTTTCTAATTCTCTGGTTAGAGACTCCAGGCTCTGT +
Preference number: 1 (lower is better)
Translates to: QTEDSSSGCSGGFGI*CKFSNSLVRDSRLC
Trigger: ACAGAGCCTGGAGTCTCTAACCAGAGAATTAGAAAACTTACAGCATATCCCAAAGCCTCCAGAGCATCCTGAGCTACTGTCCTCTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 90 bp CATAGGGCTTACAAAGACAGCAGGACACCTAAAAGAGGTGTGCCATaGCGCTGGACAGTTATTGCCTTTAGTTCTCACTATGTCCAGACA +
Preference number: 1 (lower is better)
Translates to: HRAYKDSRTPKRGVP*RWTVIAFSSHYVQT
Trigger: TGTCTGGACATAGTGAGAACTAAAGGCAATAACTGTCCAGCGTCATGGCACACCTCTTTTAGGTGTCCTGCTGTCTTTGTAAGCCCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 90 bp GCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTCTGGGCTaGAAGAGCTCCTTGACAGACTGGATTTTATCATGGACCATTCAC +
Preference number: 1 (lower is better)
Translates to: AFKGYILQPPIMPLG*KSSLTDWILSWTIH
Trigger: GTGAATGGTCCATGATAAAATCCAGTCTGTCAAGGAGCTCTTCCAGCCCAGAGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 90 bp GGGAGAACTGAGGCTTCAGAAGCAGCCAAACATTGCATGCTATCATaGGGTGAAGATGAAGAATTCATCCAGTGTGAACTCAAGCAAACC +
Preference number: 1 (lower is better)
Translates to: GRTEASEAAKHCMLS*GEDEEFIQCELKQT
Trigger: GGTTTGCTTGAGTTCACACTGGATGAATTCTTCATCTTCACCCCATGATAGCATGCAATGTTTGGCTGCTTCTGAAGCCTCAGTTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 90 bp AGGACTTGTGTGGATGAATACACATCTGCTAGCCTAGGATGTGAGTaGCTGAAAGCAGGAGCATCATGGTTTCAGGAATGGTATTGTAGG +
Preference number: 1 (lower is better)
Translates to: RTCVDEYTSASLGCE*LKAGASWFQEWYCR
Trigger: CCTACAATACCATTCCTGAAACCATGATGCTCCTGCTTTCAGTCACTCACATCCTAGGCTAGCAGATGTGTATTCATCCACACAAGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 90 bp AGGAGGTGGAGACTTTCCAGAATGTGGGTAGGAAACCATGAAATTTaGGAACAGGTGCCTACGAAAGGTTTTGGTGAGCTTCTGACTTTG +
Preference number: 1 (lower is better)
Translates to: RRWRLSRMWVGNHEI*EQVPTKGFGELLTL
Trigger: CAAAGTCAGAAGCTCACCAAAACCTTTCGTAGGCACCTGTTCTCAAATTTCATGGTTTCCTACCCACATTCTGGAAAGTCTCCACCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 90 bp GCATGGTGGGGACCATGTGGCACAGAAAGATCAACAAGAAAGGAATaGGTATGTACATGTGTTGGCTTTCTCTTATGCCCCTTTCTCTTC +
Preference number: 1 (lower is better)
Translates to: AWWGPCGTERSTRKE*VCTCVGFLLCPFLF
Trigger: GAAGAGAAAGGGGCATAAGAGAAAGCCAACACATGTACATACTCATTCCTTTCTTGTTGATCTTTCTGTGCCACATGGTCCCCACCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 90 bp TTCAAAGGCATGAGTTGTTCTGAGCCAATCTCCAGACCAACATTCTaGCACATCTGCACCTTTGTAAGGCTCCTTTCTCCATCTCTACTC +
Preference number: 1 (lower is better)
Translates to: FKGMSCSEPISRPTF*HICTFVRLLSPSLL
Trigger: GAGTAGAGATGGAGAAAGGAGCCTTACAAAGGTGCAGATGTGTCAGAATGTTGGTCTGGAGATTGGCTCAGAACAACTCATGCCTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 90 bp CCTCTCAATACTACTCACAAGTCCACTGTCCTGCAAAGTACTATCTaGATGCATTTCTCGTGGTCTGAATTGACTGCATGTGTGTGGGTT +
Preference number: 1 (lower is better)
Translates to: PLNTTHKSTVLQSTI*MHFSWSELTACVWV
Trigger: AACCCACACACATGCAGTCAATTCAGACCACGAGAAATGCATCCAGATAGTACTTTGCAGGACAGTGGACTTGTGAGTAGTATTGAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 90 bp CAGCCACCTATCATGCCTCTGGGCTGGAAGAGCTCCTTGACAGACTaGATTTTATCATGGACCATTCACCTCTTAAAAATTTCGTACCTT +
Preference number: 1 (lower is better)
Translates to: QPPIMPLGWKSSLTD*ILSWTIHLLKISYL
Trigger: AAGGTACGAAATTTTTAAGAGGTGAATGGTCCATGATAAAATCCAGTCTGTCAAGGAGCTCTTCCAGCCCAGAGGCATGATAGGTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 90 bp TATGTACATGTGTTGGCTTTCTCTTATGCCCCTTTCTCTTCTATCTaGAGTGCAGACTCTTGGATGGTGCTGACCTCATTTAAGGCAGGT +
Preference number: 1 (lower is better)
Translates to: YVHVLAFSYAPFSSI*SADSWMVLTSFKAG
Trigger: ACCTGCCTTAAATGAGGTCAGCACCATCCAAGAGTCTGCACTCCAGATAGAAGAGAAAGGGGCATAAGAGAAAGCCAACACATGTACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 90 bp CTGTCCTGCAAAGTACTATCTGGATGCATTTCTCGTGGTCTGAATTaGCTGCATGTGTGTGGGTTTATAGTTTGTTACATGCACCCATGC +
Preference number: 1 (lower is better)
Translates to: LSCKVLSGCISRGLN*LHVCGFIVCYMHPC
Trigger: GCATGGGTGCATGTAACAAACTATAAACCCACACACATGCAGTCAATTCAGACCACGAGAAATGCATCCAGATAGTACTTTGCAGGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 90 bp ACTATCTGGATGCATTTCTCGTGGTCTGAATTGACTGCATGTGTGTaGGTTTATAGTTTGTTACATGCACCCATGCTCCCATGGCTTTCT +
Preference number: 1 (lower is better)
Translates to: TIWMHFSWSELTACV*VYSLLHAPMLPWLS
Trigger: AGAAAGCCATGGGAGCATGGGTGCATGTAACAAACTATAAACCCACACACATGCAGTCAATTCAGACCACGAGAAATGCATCCAGATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 90 bp ATGGAGAAATTGATCTCTGGGCCTCACTCATTACCAAGGAGCTACTaGCAGTTGCTAACTTCTTGGGGAAGGGAGAATTCTTCTTCTATA +
Preference number: 1 (lower is better)
Translates to: MEKLISGPHSLPRSY*QLLTSWGRENSSSI
Trigger: TATAGAAGAAGAATTCTCCCTTCCCCAAGAAGTTAGCAACTGCCAGTAGCTCCTTGGTAATGAGTGAGGCCCAGAGATCAATTTCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 90 bp GTTACATGCACCCATGCTCCCATGGCTTTCTTCTCATGGGATCAGTaGGCTAGGTTTCTATACAGTGCAGTGTACTTCTGCAAAAATTAT +
Preference number: 1 (lower is better)
Translates to: VTCTHAPMAFFSWDQ*ARFLYSAVYFCKNY
Trigger: ATAATTTTTGCAGAAGTACACTGCACTGTATAGAAACCTAGCTCACTGATCCCATGAGAAGAAAGCCATGGGAGCATGGGTGCATGTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 90 bp TCTCAACTTCAGTCAGAGCTGCTTCTTTTTGCAGTGGCACTAGTCTaGGTGCCAAACCAAAATGGAACATCTATATCAATACTCCACCCT +
Preference number: 1 (lower is better)
Translates to: SQLQSELLLFAVALV*VPNQNGTSISILHP
Trigger: AGGGTGGAGTATTGATATAGATGTTCCATTTTGGTTTGGCACTCAGACTAGTGCCACTGCAAAAAGAAGCAGCTCTGACTGAAGTTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 90 bp ATGCCTCTGGGCTGGAAGAGCTCCTTGACAGACTGGATTTTATCATaGACCATTCACCTCTTAAAAATTTCGTACCTTGACAGTGATGAA +
Preference number: 1 (lower is better)
Translates to: MPLGWKSSLTDWILS*TIHLLKISYLDSDE
Trigger: TTCATCACTGTCAAGGTACGAAATTTTTAAGAGGTGAATGGTCCATGATAAAATCCAGTCTGTCAAGGAGCTCTTCCAGCCCAGAGGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 90 bp TACTTAACATTCACAGGTGTGAGTTTTCCTGTTGTGAGGGGAAGTTaGCTTATGAGAGCCCTTTGGAATGAATCCTTATGCCAGAAGACA +
Preference number: 1 (lower is better)
Translates to: YLTFTGVSFPVVRGS*LMRALWNESLCQKT
Trigger: TGTCTTCTGGCATAAGGATTCATTCCAAAGGGCTCTCATAAGCCAACTTCCCCTCACAACAGGAAAACTCACACCTGTGAATGTTAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 90 bp CAGTGCAGTGTACTTCTGCAAAAATTATGGGCTTTATCTCCAATGTaGTCATCTGTGCGACCTGGTTCATGCATTGCTTCTATACAGCTA +
Preference number: 1 (lower is better)
Translates to: QCSVLLQKLWALSPM*SSVRPGSCIASIQL
Trigger: TAGCTGTATAGAAGCAATGCATGAACCAGGTCGCACAGATGATCACATTGGAGATAAAGCCCATAATTTTTGCAGAAGTACACTGCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 90 bp TTTCCTTTCATCCTTCCCCATTTTCTCAGCACTGCACCTGATTTCTaGTATCACAGAGGTCATTGGTTGATTCCAAACTGCTTTAGGTTT +
Preference number: 1 (lower is better)
Translates to: FPFILPHFLSTAPDF*YHRGHWLIPNCFRF
Trigger: AAACCTAAAGCAGTTTGGAATCAACCAATGACCTCTGTGATAGCAGAAATCAGGTGCAGTGCTGAGAAAATGGGGAAGGATGAAAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 90 bp CACAAGTCCACTGTCCTGCAAAGTACTATCTGGATGCATTTCTCGTaGTCTGAATTGACTGCATGTGTGTGGGTTTATAGTTTGTTACAT +
Preference number: 1 (lower is better)
Translates to: HKSTVLQSTIWMHFS*SELTACVWVYSLLH
Trigger: ATGTAACAAACTATAAACCCACACACATGCAGTCAATTCAGACCACGAGAAATGCATCCAGATAGTACTTTGCAGGACAGTGGACTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 90 bp GAACATCTATATCAATACTCCACCCTGACCAGGATTAAGGGGCATTaGAGAAATACAGGGAAACAAGAATATAAGAGCTGGGGAATAGGA +
Preference number: 1 (lower is better)
Translates to: EHLYQYSTLTRIKGH*RNTGKQEYKSWGIG
Trigger: TCCTATTCCCCAGCTCTTATATTCTTGTTTCCCTGTATTTCTTCAATGCCCCTTAATCCTGGTCAGGGTGGAGTATTGATATAGATGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 90 bp CTGAGTGCCAAACCAAAATGGAACATCTATATCAATACTCCACCCTaGCCAGGATTAAGGGGCATTGAAGAAATACAGGGAAACAAGAAT +
Preference number: 1 (lower is better)
Translates to: LSAKPKWNIYINTPP*PGLRGIEEIQGNKN
Trigger: ATTCTTGTTTCCCTGTATTTCTTCAATGCCCCTTAATCCTGGTCAGGGTGGAGTATTGATATAGATGTTCCATTTTGGTTTGGCACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 90 bp TGTCACCTTCTCAGGTTACTTATTAGGAAATGCAACAGATATTTCTaGCATGTATCTCCAAAAGAAAAGCTCAGTGACGAGTGGTGGGAA +
Preference number: 1 (lower is better)
Translates to: CHLLRLLIRKCNRYF*HVSPKEKLSDEWWE
Trigger: TTCCCACCACTCGTCACTGAGCTTTTCTTTTGGAGATACATGGCAGAAATATCTGTTGCATTTCCTAATAAGTAACCTGAGAAGGTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 90 bp CTTTTTCTCTTCTCTATAGTCTACCATTCTTTCTTGCTCATCCTCTaGCACTTCCCTATTAGGACCCTATTGCTGAAGAATGACCTACTA +
Preference number: 1 (lower is better)
Translates to: LFLFSIVYHSFLLIL*HFPIRTLLLKNDLL
Trigger: TAGTAGGTCATTCTTCAGCAATAGGGTCCTAATAGGGAAGTGCCAGAGGATGAGCAAGAAAGAATGGTAGACTATAGAGAAGAGAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 90 bp AGGAGAAGATTGCTTTCTTGTTTTACAATCACACTCTATGCCAGCTaGAGCTTGCTCTGCCTCAGTGGAAATAAATGCAGAAATAAGACA +
Preference number: 1 (lower is better)
Translates to: RRRLLSCFTITLYAS*SLLCLSGNKCRNKT
Trigger: TGTCTTATTTCTGCATTTATTTCCACTGAGGCAGAGCAAGCTTCAGCTGGCATAGAGTGTGATTGTAAAACAAGAAAGCAATCTTCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 90 bp CTAAATATTATTTTATCCATTCCTTATACGGATTTAGCAGTACACTaGATTCCTGGGAATGTTTTGCTAGTTTCCAGGCTTGGAGAGCCC +
Preference number: 1 (lower is better)
Translates to: LNIILSIPYTDLAVH*IPGNVLLVSRLGEP
Trigger: GGGCTCTCCAAGCCTGGAAACTAGCAAAACATTCCCAGGAATGCAGTGTACTGCTAAATCCGTATAAGGAATGGATAAAATAATATTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 90 bp GATTGCTTTCTTGTTTTACAATCACACTCTATGCCAGCTGAAGCTTaGTCTGCCTCAGTGGAAATAAATGCAGAAATAAGACATCGAAAG +
Preference number: 1 (lower is better)
Translates to: DCFLVLQSHSMPAEA*SASVEINAEIRHRK
Trigger: CTTTCGATGTCTTATTTCTGCATTTATTTCCACTGAGGCAGAGCAAGCTTCAGCTGGCATAGAGTGTGATTGTAAAACAAGAAAGCAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 90 bp TCTTACCCTGTCAGATGTCACCTTCTCAGGTTACTTATTAGGAAATaGAACAGATATTTCTGCCATGTATCTCCAAAAGAAAAGCTCAGT +
Preference number: 1 (lower is better)
Translates to: SYPVRCHLLRLLIRK*NRYFCHVSPKEKLS
Trigger: ACTGAGCTTTTCTTTTGGAGATACATGGCAGAAATATCTGTTGCATTTCCTAATAAGTAACCTGAGAAGGTGACATCTGACAGGGTAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 90 bp CATAGCAATGCAATGCTAGTCAAAATCAGATGTCAGGAGAGGTCATaGACACTAAGATGGAATCCACAGGTTTATTTTAGTAAATGGTCA +
Preference number: 1 (lower is better)
Translates to: HSNAMLVKIRCQERS*TLRWNPQVYFSKWS
Trigger: TGACCATTTACTAAAATAAACCTGTGGATTCCATCTTAGTGTCCATGACCTCTCCTGACATCTGATTTTGACTAGCATTGCATTGCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 90 bp ATACAGATGTATTTACTTGAGGTATGTCATCATGAAAGCATGCAATaGTATCTGGGGATGTGGATGAATAGTCTCCTCTTTATAGTCTCA +
Preference number: 1 (lower is better)
Translates to: IQMYLLEVCHHESMQ*YLGMWMNSLLFIVS
Trigger: TGAGACTATAAAGAGGAGACTATTCATCCACATCCCCAGATATCATTGCATGCTTTCATGATGACATACCTCAAGTAAATACATCTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 90 bp ACCATCTTTGTTAATGAAAAATATCTTCCATGTCATCTCACTTGTTaGTTAGGCAGGTGTTTTACACAGGACATCATAATAGAATCTCAC +
Preference number: 1 (lower is better)
Translates to: TIFVNEKYLPCHLTC*LGRCFTQDIIIESH
Trigger: GTGAGATTCTATTATGATGTCCTGTGTAAAACACCTGCCTAACCAACAAGTGAGATGACATGGAAGATATTTTTCATTAACAAAGATGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACGGGAAGTTATGGGGGTaGTTCCTCTCCCTGGGCTGT +
Preference number: 2 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHGKLWG*FLSLGC
Trigger: ACAGCCCAGGGAGAGGAATCACCCCCATAACTTCCC...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp TCCTATTCCCCAGCCAGATCCTCTTGGTGCCCATCTAGGGGGTTTCTTAACTGTGCAGCAGCACTTGTCTaGGTCAGAAGGTCCTGGGTT +
Preference number: 2 (lower is better)
Translates to: SYSPARSSWCPSRGFLNCAAALV*VRRSWV
Trigger: AACCCAGGACCTTCTGACTCAGACAAGTGCTGCTGC...ACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGGGAGAGGTGCCAGGTTaGCAGTACTCAGGGGGACTT +
Preference number: 2 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWGEVPG*QYSGGL
Trigger: AAGTCCCCCTGAGTACTGGCAACCTGGCACCTCTCC...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 90 bp GCAGAAGCATCCCTTGGAGTCTCTGGAGCATTCAAAGGCTATATATaGCAGCCACCTATCATGCCTCTGGGCTGGAAGAGCTCCTTGACA +
Preference number: 2 (lower is better)
Translates to: AEASLGVSGAFKGYI*QPPIMPLGWKSSLT
Trigger: TGTCAAGGAGCTCTTCCAGCCCAGAGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAGGGATGCTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGGTCACTCCAGCATGGTaGGGACCATGTGGCACAGAA +
Preference number: 2 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWVTPAW*GPCGTE
Trigger: TTCTGTGCCACATGGTCCCCACCATGCTGGAGTGAC...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp TCCTATTCCCCAGCCAGATCCTCTTGGTGCCCATCTAGGGGGTTTCTTAACTGTACATGTCAATGCTACTaGGTAGGTAGAGTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: SYSPARSSWCPSRGFLNCTCQCY*VGRVCA
Trigger: GGCACAGACTCTACCTACTCAGTAGCATTGACATGT...ACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACAACAGCAGGATGGTTTaGGATAAGTCTGAAGGGGGA +
Preference number: 2 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHNSRMV*DKSEGG
Trigger: TCCCCCTTCAGACTTATCTCAAACCATCCTGCTGTT...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGACTAGGAAGAGGGAATaGATGGTCAGAGGCCTCAGG +
Preference number: 2 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWTRKRE*MVRGLR
Trigger: CCTGAGGCCTCTGACCATGCATTCCCTCTTCCTAGT...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 90 bp TCTACTCACTGTTTCTCCATCCTCCACCCGGAAATCCCTGGATCTTaGTCAACAACCCTACAAAGCCCCATGCCAGCAAATACACTCCAT +
Preference number: 2 (lower is better)
Translates to: STHCFSILHPEIPGS*STTLQSPMPANTLH
Trigger: ATGGAGTGTATTTGCTGGCATGGGGCTTTGTAGGGTTGTTGACAAAGATCCAGGGATTTCCGGGTGGAGGATGGAGAAACAGTGAGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGTCTCAGCACTGCACCTaGTTTCTGCTATCACAGAGG +
Preference number: 2 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWSQHCT*FLLSQR
Trigger: CCTCTGTGATAGCAGAAATCAGGTGCAGTGCTGAGA...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACCTTACATGGAGAAATTaGTCTCTGGGCCTCACTCAT +
Preference number: 2 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHLTWRN*SLGLTH
Trigger: ATGAGTGAGGCCCAGAGATCAATTTCTCCATGTAAG...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACACAAGTCCACTGTCCTaGAAAGTACTATCTGGATGC +
Preference number: 2 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHTSPLS*KVLSGC
Trigger: GCATCCAGATAGTACTTTGCAGGACAGTGGACTTGT...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp CCTCCTTCTGCTAGGGAGAGTTTCTCTCAGTCTTCTCTATTTCAGAGAGGAATTGATCTTGAGCAGCTCTaGACAGTCACCCAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: PPSARESFSQSSLFQRGIDLEQL*TVTQAA
Trigger: AGCAGCCTGGGTGACTGTCCAGAGCTGCTCAAGATC...AATTCCTCTCTGAAATAGAGAAGACTGAGAGAAACTCTCCCTAGCAGAAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp TCCTATTCCCCAGCCAGATCCTCTTGGTGCCCATCTAGGGGGTTTCTTAACTGTGTCAGGTCTTCGGTCTaGCTTTTGTTTCTCATTCTG +
Preference number: 2 (lower is better)
Translates to: SYSPARSSWCPSRGFLNCVRSSV*LLFLIL
Trigger: CAGAATGAGAAACAAAAGCCAGACCGAAGACCTGAC...ACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACGGCTTGGATTTATTATaGAGAGGGATATCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHGLDLL*RGISPL
Trigger: CAGAGGAGATATCCCTCTGCATAATAAATCCAAGCC...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACATCATCTGTGCGACCTaGTTCATGCATTGCTTCTAT +
Preference number: 2 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHIICAT*FMHCFY
Trigger: ATAGAAGCAATGCATGAACCAGGTCGCACAGATGAT...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACATCCCTTGGAGTCTCTaGAGCATTCAAAGGCTATAT +
Preference number: 2 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHIPWSL*SIQRLY
Trigger: ATATAGCCTTTGAATGCTCCAGAGACTCCAAGGGAT...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGAGCAGAAGCATCCCTTaGAGTCTCTGGAGCATTCAA +
Preference number: 2 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWSRSIP*SLWSIQ
Trigger: TTGAATGCTCCAGAGACTCCAAGGGATGCTTCTGCT...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACGGTGATTCCTCTCCCTaGGCTGTAGTTTTTCATTTT +
Preference number: 2 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHGDSSP*AVVFHF
Trigger: AAAATGAAAAACTACAGCCCAGGGAGAGGAATCACC...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp TCCTATTCCCCAGCCAGATCCTCTTGGTGCCCATCTAGGGGGTTTCTTAACTGTATGGTGAATTCCTCCTaGCATGAGAAGAAAATGTTG +
Preference number: 2 (lower is better)
Translates to: SYSPARSSWCPSRGFLNCMVNSS*HEKKML
Trigger: CAACATTTTCTTCTCATGTCAGGAGGAATTCACCAT...ACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGCCATCTTCAAAGGCATaGGTTGTTCTGAGCCAATCT +
Preference number: 2 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWPSSKA*VVLSQS
Trigger: AGATTGGCTCAGAACAACTCATGCCTTTGAAGATGG...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGACTGCACCTGATTTCTaGTATCACAGAGGTCATTGG +
Preference number: 2 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWTAPDF*YHRGHW
Trigger: CCAATGACCTCTGTGATAGCAGAAATCAGGTGCAGT...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACTTTAATATGCCCTCTTaGCTTTATACACACCCATCC +
Preference number: 2 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHFNMPS*LYTHPS
Trigger: GGATGGGTGTGTATAAAGGCAAGAGGGCATATTAAA...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGAACTTCAGTCAGAGCTaGTTCTTTTTGCAGTGGCAC +
Preference number: 2 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWNFSQS*FFLQWH
Trigger: GTGCCACTGCAAAAAGAAGCAGCTCTGACTGAAGTT...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp TCCTATTCCCCAGCCAGATCCTCTTGGTGCCCATCTAGGGGGTTTCTTAACTGTAACAACCTACAAATGTaGAGGGTGGAAACATTTAGG +
Preference number: 2 (lower is better)
Translates to: SYSPARSSWCPSRGFLNCNNLQM*RVETFR
Trigger: CCTAAATGTTTCCACCCTGCACATTTGTAGGTTGTT...ACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACTATAAGAGTACCAGTTaGCCTTCTTTCTGCAAAGGT +
Preference number: 2 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHYKSTS*PSFCKG
Trigger: ACCTTTGCAGAAAGAAGGGCAACTGGTACTCTTATA...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGGGCATGTGCCACCACTaGCTGGCTGTTGTTTGCTTT +
Preference number: 2 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVGMCHH*LAVVCF
Trigger: AAAGCAAACAACAGCCAGGCAGTGGTGGCACATGCC...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGGCACCCATGCTCCCATaGCTTTCTTCTCATGGGATC +
Preference number: 2 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVAPMLP*LSSHGI
Trigger: GATCCCATGAGAAGAAAGCCATGGGAGCATGGGTGC...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp TCCTATTCCCCAGCCAGATCCTCTTGGTGCCCATCTAGGGGGTTTCTTAACTGTTGTCATCTCACTTGTTaGTTAGGCAGGTGTTTTACA +
Preference number: 2 (lower is better)
Translates to: SYSPARSSWCPSRGFLNCCHLTC*LGRCFT
Trigger: TGTAAAACACCTGCCTAACCAACAAGTGAGATGACA...ACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACTTGGCATTTGCTGCCTaGGATTATATACCAATGCAA +
Preference number: 2 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHLAFAA*DYIPMQ
Trigger: TTGCATTGGTATATAATCCCAGGCAGCAAATGCCAA...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 90 bp TGGGCCTCACTCATTACCAAGGAGCTACTGGCAGTTGCTAACTTCTaGGGGAAGGGAGAATTCTTCTTCTATAAGTCTGTGACTACTCAT +
Preference number: 2 (lower is better)
Translates to: WASLITKELLAVANF*GKGEFFFYKSVTTH
Trigger: ATGAGTAGTCACAGACTTATAGAAGAAGAATTCTCCCTTCCCCAAGAAGTTAGCAACTGCCAGTAGCTCCTTGGTAATGAGTGAGGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACTTTTCAAATGAGGCATaGCACTCAATACTTGACACT +
Preference number: 2 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHFSNEA*HSILDT
Trigger: AGTGTCAAGTATTGAGTGTCATGCCTCATTTGAAAA...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTAGCAGGCTTGCAACCTaGGCATTTCATTTCCAAGTA +
Preference number: 2 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPSRLAT*AFHFQV
Trigger: TACTTGGAAATGAAATGCTCAGGTTGCAAGCCTGCT...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGAGCCTAGGATGTGAGTaGCTGAAAGCAGGAGCATCA +
Preference number: 2 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVSLGCE*LKAGAS
Trigger: TGATGCTCCTGCTTTCAGTCACTCACATCCTAGGCT...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTCACATAGCAAGTTTCTaGTTCCAACAACATTGCCCC +
Preference number: 2 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPHIASF*FQQHCP
Trigger: GGGGCAATGTTGTTGGAATCAGAAACTTGCTATGTG...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACGCTGCACATGTTCTTTaGCCAACTATGAAAAGAAAT +
Preference number: 2 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHAAHVL*PTMKRN
Trigger: ATTTCTTTTCATAGTTGGTCAAAGAACATGTGCAGC...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGTGGATGCATTTCTCGTaGTCTGAATTGACTGCATGT +
Preference number: 2 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWWMHFS*SELTAC
Trigger: ACATGCAGTCAATTCAGACCACGAGAAATGCATCCA...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGTTCACATGTTGTCTGTaGGCTTCTGTATGGCATAGA +
Preference number: 2 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWFTCCL*ASVWHR
Trigger: TCTATGCCATACAGAAGCCCACAGACAACATGTGAA...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACTCAGGTTTTCATGAATaGATTACACATGGTGCTTTC +
Preference number: 2 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHSGFHE*ITHGAF
Trigger: GAAAGCACCATGTGTAATCCATTCATGAAAACCTGA...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 90 bp CCTCCGACTCTTCTTTTTCTCTTCTCTATAGTCTACCATTCTTTCTaGCTCATCCTCTGGCACTTCCCTATTAGGACCCTATTGCTGAAG +
Preference number: 2 (lower is better)
Translates to: PPTLLFLFSIVYHSF*LILWHFPIRTLLLK
Trigger: CTTCAGCAATAGGGTCCTAATAGGGAAGTGCCAGAGGATGAGCAAGAAAGAATGGTAGACTATAGAGAAGAGAAAAAGAAGAGTCGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 90 bp TTCTCTACCACTATCTATGTTCCAGGAATAATGCGATTGGGCGGTTaGAGAAAAGTGAAGGATGACAGGGACCAGGGTCCTGTAGTTATA +
Preference number: 2 (lower is better)
Translates to: FSTTIYVPGIMRLGG*RKVKDDRDQGPVVI
Trigger: TATAACTACAGGACCCTGGTCCCTGTCATCCTTCACTTTTCTCAAACCGCCCAATCGCATTATTCCTGGAACATAGATAGTGGTAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 90 bp AACTTGTACAGACAGAGGACAGTAGCTCAGGATGCTCTGGAGGCTTaGGGATATGCTGTAAGTTTTCTAATTCTCTGGTTAGAGACTCCA +
Preference number: 2 (lower is better)
Translates to: NLYRQRTVAQDALEA*GYAVSFLILWLETP
Trigger: TGGAGTCTCTAACCAGAGAATTAGAAAACTTACAGCATATCCCAAAGCCTCCAGAGCATCCTGAGCTACTGTCCTCTGTCTGTACAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 90 bp AGAAGCAAGAGTGGAAAAGCTTTACAGTTTAAGGATTCTAGGAACTaGTACAGACAGAGGACAGTAGCTCAGGATGCTCTGGAGGCTTTG +
Preference number: 2 (lower is better)
Translates to: RSKSGKALQFKDSRN*YRQRTVAQDALEAL
Trigger: CAAAGCCTCCAGAGCATCCTGAGCTACTGTCCTCTGTCTGTACAAGTTCCTAGAATCCTTAAACTGTAAAGCTTTTCCACTCTTGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTTTCTCATGGGATCAGTaGGCTAGGTTTCTATACAGT +
Preference number: 2 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPFSWDQ*ARFLYS
Trigger: ACTGTATAGAAACCTAGCTCACTGATCCCATGAGAA...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGAGACCAGGCTGGCCTTaGACTCAGAAATCCACCTGC +
Preference number: 2 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRRPGWP*TQKSTC
Trigger: GCAGGTGGATTTCTGAGTTCAAGGCCAGCCTGGTCT...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGAAATTTGAGAACAGGTaGCTACGAAAGGTTTTGGTG +
Preference number: 2 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWKFENR*LRKVLV
Trigger: CACCAAAACCTTTCGTAGGCACCTGTTCTCAAATTT...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGTGGAATGAATCCTTATaGCAGAAGACAGCTAGTTAC +
Preference number: 2 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWWNESL*QKTASY
Trigger: GTAACTAGCTGTCTTCTGGCATAAGGATTCATTCCA...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGTGGCCTGAATTAGAATaGACTCATTACTCTGTAGAC +
Preference number: 2 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWWPELE*THYSVD
Trigger: GTCTACAGAGTAATGAGTGCATTCTAATTCAGGCCA...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACATTGGATCATTATCTTaGCAGGCATTTTGCTTATCA +
Preference number: 2 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHIGSLS*QAFCLS
Trigger: TGATAAGCAAAATGCCTGCCAAGATAATGATCCAAT...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGTTCTTGCTCATCCTCTaGCACTTCCCTATTAGGACC +
Preference number: 2 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVFLLIL*HFPIRT
Trigger: GGTCCTAATAGGGAAGTGCCAGAGGATGAGCAAGAA...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGATTCCCATAGTCTTTTaGGGTGCACTTTTTGCAAAC +
Preference number: 2 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWIPIVF*GALFAN
Trigger: GTTTGCAAAAAGTGCACCCCAAAAGACTATGGGAAT...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 90 bp CAAGGAGAGGAGCAGCAGCTGGCCATGTTAATGGTTTTGAATTTTTaGCTCTTGCATTCAAGGCTAATCCAGCATTTCTTTGGAAGTGCA +
Preference number: 2 (lower is better)
Translates to: QGEEQQLAMLMVLNF*LLHSRLIQHFFGSA
Trigger: TGCACTTCCAAAGAAATGCTGGATTAGCCTTGAATGCAAGAGCAAAAAATTCAAAACCATTAACATGGCCAGCTGCTGCTCCTCTCCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 90 bp ACTGTCCTGCAAAGTACTATCTGGATGCATTTCTCGTGGTCTGAATaGACTGCATGTGTGTGGGTTTATAGTTTGTTACATGCACCCATG +
Preference number: 2 (lower is better)
Translates to: TVLQSTIWMHFSWSE*TACVWVYSLLHAPM
Trigger: CATGGGTGCATGTAACAAACTATAAACCCACACACATGCAGTCAATTCAGACCACGAGAAATGCATCCAGATAGTACTTTGCAGGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 90 bp ACAGCAGGACACCTAAAAGAGGTGTGCCATGACGCTGGACAGTTATaGCCTTTAGTTCTCACTATGTCCAGACAGCATATTGAAGTTAAA +
Preference number: 2 (lower is better)
Translates to: TAGHLKEVCHDAGQL*PLVLTMSRQHIEVK
Trigger: TTTAACTTCAATATGCTGTCTGGACATAGTGAGAACTAAAGGCAATAACTGTCCAGCGTCATGGCACACCTCTTTTAGGTGTCCTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 90 bp TGGAACCCAGTTGAGTCTCTGTGTGAAGGAAAACATCACACAAACTaGGTTCAGGATCAACAGGTAATTCAATCACTGGGCTCAACAACT +
Preference number: 2 (lower is better)
Translates to: WNPVESLCEGKHHTN*VQDQQVIQSLGSTT
Trigger: AGTTGTTGAGCCCAGTGATTGAATTACCTGTTGATCCTGAACCAAGTTTGTGTGATGTTTTCCTTCACACAGAGACTCAACTGGGTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 90 bp TGCAAACCTAGACTTTGCCAATGTACCTTTCTCTATGGAACCCAGTaGAGTCTCTGTGTGAAGGAAAACATCACACAAACTTGGTTCAGG +
Preference number: 2 (lower is better)
Translates to: CKPRLCQCTFLYGTQ*SLCVKENITQTWFR
Trigger: CCTGAACCAAGTTTGTGTGATGTTTTCCTTCACACAGAGACTCAACTGGGTTCCATAGAGAAAGGTACATTGGCAAAGTCTAGGTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 90 bp TTCTTTTTATTCTCTACCACTATCTATGTTCCAGGAATAATGCGATaGGGCGGTTTGAGAAAAGTGAAGGATGACAGGGACCAGGGTCCT +
Preference number: 2 (lower is better)
Translates to: FFLFSTTIYVPGIMR*GGLRKVKDDRDQGP
Trigger: AGGACCCTGGTCCCTGTCATCCTTCACTTTTCTCAAACCGCCCAATCGCATTATTCCTGGAACATAGATAGTGGTAGAGAATAAAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 90 bp GGTCAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTaGGGTAGATGGACCATTTCTAATGTTTTCTGCATCTACTTGTTG +
Preference number: 2 (lower is better)
Translates to: GQDGSLFSTWSSAQL*GRWTISNVFCIYLL
Trigger: CAACAAGTAGATGCAGAAAACATTAGAAATGGTCCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTAGATTCTCTCCCTCCTaGCATGTAAATAATGGTGAA +
Preference number: 2 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPRFSPS*HVNNGE
Trigger: TTCACCATTATTTACATGTCAGGAGGGAGAGAATCT...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp TTTGCTCTTGCATTCAAGGCTAATCCAGCATTTCTTTGGAAGTGCATCAGCAGGCTATTTACAGGAAGATaGCTCACTTCCACACAGAAG +
Preference number: 2 (lower is better)
Translates to: FALAFKANPAFLWKCISRLFTGR*LTSTQK
Trigger: CTTCTGTGTGGAAGTGAGGCATCTTCCTGTAAATAG...CCTGCTGATGCACTTCCAAAGAAATGCTGGATTAGCCTTGAATGCAAGAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGTCTACCATTCTTTCTTaGTCATCCTCTGGCACTTCC +
Preference number: 2 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVSTILS*SSSGTS
Trigger: GGAAGTGCCAGAGGATGAGCAAGAAAGAATGGTAGA...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp TTTGCTCTTGCATTCAAGGCTAATCCAGCATTTCTTTGGAAGTGCATCAGCAGGAGCTGGGCTCACCAATaGCAAATGTCTGTTTCTTAT +
Preference number: 2 (lower is better)
Translates to: FALAFKANPAFLWKCISRSWAHQ*QMSVSY
Trigger: ATAAGAAACAGACATTTGCCATTGGTGAGCCCAGCT...CCTGCTGATGCACTTCCAAAGAAATGCTGGATTAGCCTTGAATGCAAGAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp GAACTGTTGTCTTCAGGACACATCATGTCCATGTATTCACATCAATTATGGTCAGTCTGTGACTACTCATaGGTTTCCCATGCTCTGATG +
Preference number: 2 (lower is better)
Translates to: ELLSSGHIMSMYSHQLWSVCDYS*VSHALM
Trigger: CATCAGAGCATGGGAAACTCATGAGTAGTCACAGAC...TGACCATAATTGATGTGAATACATGGACATGATGTGTCCTGAAGACAACAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCAGCATTTCTTTGGAAGTaGATCAGCAGGAGTTCCACA +
Preference number: 2 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSAFLWK*ISRSST
Trigger: TGTGGAACTCCTGCTGATGCACTTCCAAAGAAATGC...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCAATACACACCCATCCCTaGCCCTTAATGTCTTTGGTT +
Preference number: 2 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSIHTHP*PLMSLV
Trigger: AACCAAAGACATTAAGGGGCAGGGATGGGTGTGTAT...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGCAGTTGCTAACTTCTTaGGGAAGGGAGAATTCTTCT +
Preference number: 2 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVQLLTS*GRENSS
Trigger: AGAAGAATTCTCCCTTCCCCAAGAAGTTAGCAACTG...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGTCATGGACACTAAGATaGAATCCACAGGTTTATTTT +
Preference number: 2 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWSWTLR*NPQVYF
Trigger: AAAATAAACCTGTGGATTCCATCTTAGTGTCCATGA...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTCAATATATTGGGGCTTaGATTTATTATGCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPQYIGA*IYYAEG
Trigger: TCCCTCTGCATAATAAATCCAAGCCCCAATATATTG...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp GAACTGTTGTCTTCAGGACACATCATGTCCATGTATTCACATCAATTATGGTCACAGGAGTTCCACACATaGATACATTCATCTGACTGC +
Preference number: 2 (lower is better)
Translates to: ELLSSGHIMSMYSHQLWSQEFHT*IHSSDC
Trigger: GCAGTCAGATGAATGTATTCATGTGTGGAACTCCTG...TGACCATAATTGATGTGAATACATGGACATGATGTGTCCTGAAGACAACAGTTC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCAACAGAGGTCATTGGTTaGTTCCAAACTGCTTTAGGT +
Preference number: 2 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSTEVIG*FQTALG
Trigger: ACCTAAAGCAGTTTGGAATCAACCAATGACCTCTGT...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGAGGATTAAGGGGCATTaGAGAAATACAGGGAAACAA +
Preference number: 2 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVRIKGH*RNTGKQ
Trigger: TTGTTTCCCTGTATTTCTTCAATGCCCCTTAATCCT...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGTGTTACATGCACCCATaGTCCCATGGCTTTCTTCTC +
Preference number: 2 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRCYMHP*SHGFLL
Trigger: GAGAAGAAAGCCATGGGAGCATGGGTGCATGTAACA...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCACCTTCTACTCCACTCTaGAATACAGAGATGTGGAAA +
Preference number: 2 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSPSTPL*NTEMWK
Trigger: TTTCCACATCTCTGTATTCCAGAGTGGAGTAGAAGG...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCAAATCCAGCATTTCTTTaGAAGTGCATCAGCAGGAGT +
Preference number: 2 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSNPAFL*KCISRS
Trigger: ACTCCTGCTGATGCACTTCCAAAGAAATGCTGGATT...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCATCTTCTATAAGTCTGTaGCTACTCATGAGTTTCCCA +
Preference number: 2 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSSSISL*LLMSFP
Trigger: TGGGAAACTCATGAGTAGTCACAGACTTATAGAAGA...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGGTTTTGGTGAGCTTCTaGCTTTGTACGGATATCCAG +
Preference number: 2 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRVLVSF*LCTDIQ
Trigger: CTGGATATCCGTACAAAGTCAGAAGCTCACCAAAAC...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGCAGCCAAACATTGCATaGTATCATGGGGTGAAGATG +
Preference number: 2 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRQPNIA*YHGVKM
Trigger: CATCTTCACCCCATGATAGCATGCAATGTTTGGCTG...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGTCAAATGACAAGAGGTaGAGAAACGCTGATGACGAG +
Preference number: 2 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRSNDKR*RNADDE
Trigger: CTCGTCATCAGCGTTTCTCCACCTCTTGTCATTTGA...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGATTGGGGATAGGATATaGTCATATTCCATTGTATGC +
Preference number: 2 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVIGDRI*SYSIVC
Trigger: GCATACAATGGAATATGACCATATCCTATCCCCAAT...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCAAAAGTACTATCTGGATaGATTTCTCGTGGTCTGAAT +
Preference number: 2 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSKVLSG*ISRGLN
Trigger: ATTCAGACCACGAGAAATGCATCCAGATAGTACTTT...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGCATAGGATTGGCATTTaGTGCCTGGGATTATATACC +
Preference number: 2 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRHRIGI*CLGLYT
Trigger: GGTATATAATCCCAGGCAGCAAATGCCAATCCTATG...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGCTGCAAAGTACTATCTaGATGCATTTCTCGTGGTCT +
Preference number: 2 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRLQSTI*MHFSWS
Trigger: AGACCACGAGAAATGCATCCAGATAGTACTTTGCAG...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGGTGTCCAAGAATCAATaGAGAAGAACCCCAGATTCA +
Preference number: 2 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRVSKNQ*RRTPDS
Trigger: TGAATCTGGGGTTCTTCTCCATTGATTCTTGGACAC...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR TCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGCCCTCTTTGAGACCATaGCAAAATACTTTACCTTTC +
Preference number: 2 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRPSLRP*QNTLPF
Trigger: GAAAGGTAAAGTATTTTGTCATGGTCTCAAAGAGGG...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCACAAGAATATAAGAGCTaGGGAATAGGAAGAATTTGT +
Preference number: 2 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSQEYKS*GIGRIC
Trigger: ACAAATTCTTCCTATTCCCCAGCTCTTATATTCTTG...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp GAACTGTTGTCTTCAGGACACATCATGTCCATGTATTCACATCAATTATGGTCAACCTGGTTCATGCATTaGTTCTATACAGCTAATTTT +
Preference number: 2 (lower is better)
Translates to: ELLSSGHIMSMYSHQLWSTWFMH*FYTANF
Trigger: AAAATTAGCTGTATAGAAGCAATGCATGAACCAGGT...TGACCATAATTGATGTGAATACATGGACATGATGTGTCCTGAAGACAACAGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp GAACTGTTGTCTTCAGGACACATCATGTCCATGTATTCACATCAATTATGGTCAATCTCATCTTTAATATaGCCTCTTGCCTTTATACAC +
Preference number: 2 (lower is better)
Translates to: ELLSSGHIMSMYSHQLWSISSLI*PLAFIH
Trigger: GTGTATAAAGGCAAGAGGGCATATTAAAGATGAGAT...TGACCATAATTGATGTGAATACATGGACATGATGTGTCCTGAAGACAACAGTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 90 bp TGGTTAGATGAAATTAGTGCTAGATTTGTCTTGACTTTGTCCAATTaGAACAGGGAACTATTCATTCATCTTTGCAGAATCTCAGCTTCA +
Preference number: 2 (lower is better)
Translates to: WLDEISARFVLTLSN*NRELFIHLCRISAS
Trigger: TGAAGCTGAGATTCTGCAAAGATGAATGAATAGTTCCCTGTTCAAATTGGACAAAGTCAAGACAAATCTAGCACTAATTTCATCTAACCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR GCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGTGGTTGATTCCAAACTaGTTTAGGTTTCTATCTCTT +
Preference number: 2 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRWLIPN*FRFLSL
Trigger: AAGAGATAGAAACCTAAAGCAGTTTGGAATCAACCA...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGATAAAAGGACTTGTGTaGATGAATACACATCTGCTA +
Preference number: 2 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRIKGLV*MNTHLL
Trigger: TAGCAGATGTGTATTCATCCACACAAGTCCTTTTAT...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGCATTTTCAGTTGCTCTaGCTGAGATTAAAAACTGAA +
Preference number: 2 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRHFQLL*LRLKTE
Trigger: TTCAGTTTTTAATCTCAGCCAGAGCAACTGAAAATG...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp CAGAAACCAGCTCTGTTCTGGCCTTGTTATCTCCTCTaGCCAGGAGTCCCAGGAGCTGATGCAGTGCTGGAG +
Preference number: 3 (lower is better)
Translates to: QKPALFWPCYLL*PGVPGADAVLE
Trigger: CTCCAGCACTGCATCAGCTCCTGGGACTCCTGGTCAGAGGAGATAACAAGGCCAGAACAGAGCTGGTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp GAGTCCATCTCTGTGGGAACTAGGATCCAGGAGAGATaGGGGAGGCAGTCACCAACGCTGGGGAAACAGACT +
Preference number: 3 (lower is better)
Translates to: ESISVGTRIQER*GRQSPTLGKQT
Trigger: AGTCTGTTTCCCCAGCGTTGGTGACTGCCTCCCTCATCTCTCCTGGATCCTAGTTCCCACAGAGATGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp GGAGAGCCCTCTGCAGGTCATGGGTGGCCATGCCTCTaGTACCTACTTGGTACTAGGCATGTGAAGTCCAGA +
Preference number: 3 (lower is better)
Translates to: GEPSAGHGWPCL*YLLGTRHVKSR
Trigger: TCTGGACTTCACATGCCTAGTACCAAGTAGGTATCAGAGGCATGGCCACCCATGACCTGCAGAGGGCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp CTCTCTCCTCTGGGCACTCATATATTTAGGACAGATTaGCAGCCTCCCTCATTGTCCACCGGGCCCCACTCA +
Preference number: 3 (lower is better)
Translates to: LSPLGTHIFRTD*QPPSLSTGPHS
Trigger: TGAGTGGGGCCCGGTGGACAATGAGGGAGGCTGCCAATCTGTCCTAAATATATGAGTGCCCAGAGGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp CTAACCAGGGACACAACACTAGGAAGAGGGAATGCATaGTCAGAGGCCTCAGGGACCTGTAGACTCGGGTAC +
Preference number: 3 (lower is better)
Translates to: LTRDTTLGRGNA*SEASGTCRLGY
Trigger: GTACCCGAGTCTACAGGTCCCTGAGGCCTCTGACCATGCATTCCCTCTTCCTAGTGTTGTGTCCCTGGTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp GTTCTGCTCCTCATTGGCTCATGGAGTCCATCTCTGTaGGAACTAGGATCCAGGAGAGATGAGGGAGGCAGT +
Preference number: 3 (lower is better)
Translates to: VLLLIGSWSPSL*ELGSRRDEGGS
Trigger: ACTGCCTCCCTCATCTCTCCTGGATCCTAGTTCCCACAGAGATGGACTCCATGAGCCAATGAGGAGCAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp AAGAGACACGGGACCGTTCTGCTCCTCATTGGCTCATaGAGTCCATCTCTGTGGGAACTAGGATCCAGGAGA +
Preference number: 3 (lower is better)
Translates to: KRHGTVLLLIGS*SPSLWELGSRR
Trigger: TCTCCTGGATCCTAGTTCCCACAGAGATGGACTCCATGAGCCAATGAGGAGCAGAACGGTCCCGTGTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp TGTCTGCAAGAGACACGGGACCGTTCTGCTCCTCATTaGCTCATGGAGTCCATCTCTGTGGGAACTAGGATC +
Preference number: 3 (lower is better)
Translates to: CLQETRDRSAPH*LMESISVGTRI
Trigger: GATCCTAGTTCCCACAGAGATGGACTCCATGAGCCAATGAGGAGCAGAACGGTCCCGTGTCTCTTGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp CCCATGCCAGCAAATACACTCCATCCCCAGTGTGCCTaGGATCCTCACAGGTCTTCAAAGTACCTGTGTTCC +
Preference number: 3 (lower is better)
Translates to: PMPANTLHPQCA*DPHRSSKYLCS
Trigger: GGAACACAGGTACTTTGAAGACCTGTGAGGATCTCAGGCACACTGGGGATGGAGTGTATTTGCTGGCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp GAATGTTTTGCTAGTTTCCAGGCTTGGAGAGCCCTCTaGAGGTCATGGGTGGCCATGCCTCTGATACCTACT +
Preference number: 3 (lower is better)
Translates to: ECFASFQAWRAL*RSWVAMPLIPT
Trigger: AGTAGGTATCAGAGGCATGGCCACCCATGACCTGCAGAGGGCTCTCCAAGCCTGGAAACTAGCAAAACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp AAGCCCCATGCCAGCAAATACACTCCATCCCCAGTGTaGCTGAGATCCTCACAGGTCTTCAAAGTACCTGTG +
Preference number: 3 (lower is better)
Translates to: KPHASKYTPSPV*LRSSQVFKVPV
Trigger: CACAGGTACTTTGAAGACCTGTGAGGATCTCAGGCACACTGGGGATGGAGTGTATTTGCTGGCATGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp CTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATaGAGGGTCACTACCACACCAGCCCCACCCTTCAAA +
Preference number: 3 (lower is better)
Translates to: LQNLFTQLTKLL*RVTTTPAPPFK
Trigger: TTTGAAGGGTGGGGCTGGTGTGGTAGTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp AGACAACCAGGAGACAGAGGGATGGACCAACATAAGTaGTCTGCCAGTCATGGAACACTCCAACTATCCCCC +
Preference number: 3 (lower is better)
Translates to: RQPGDRGMDQHK*SASHGTLQLSP
Trigger: GGGGGATAGTTGGAGTGTTCCATGACTGGCAGATCACTTATGTTGGTCCATCCCTCTGTCTCCTGGTTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp CCCTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTaGAGCCACCTATCATGCCTCTGGGCTGGAAGAGCT +
Preference number: 3 (lower is better)
Translates to: PLESLEHSKAIY*SHLSCLWAGRA
Trigger: AGCTCTTCCAGCCCAGAGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp AATGCAAGAGTCAAAGCAGTCCTCAAACAGACCCTGTaGCTTGATGAAGGGAGCAGTGTCGTAAGGAGGGAG +
Preference number: 3 (lower is better)
Translates to: NARVKAVLKQTL*LDEGSSVVRRE
Trigger: CTCCCTCCTTACGACACTGCTCCCTTCATCAAGGCACAGGGTCTGTTTGAGGACTGCTTTGACTCTTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp TCCCCCTATGCTTTCAAGGATATAGCATTAAGAGCCTaGGAAGTTATGGGGGTGATTCCTCTCCCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: SPYAFKDIALRA*EVMGVIPLPGL
Trigger: CAGCCCAGGGAGAGGAATCACCCCCATAACTTCCCAGGCTCTTAATGCTATATCCTTGAAAGCATAGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp TACTCACTGTTTCTCCATCCTCCACCCGGAAATCCCTaGATCTTTGTCAACAACCCTACAAAGCCCCATGCC +
Preference number: 3 (lower is better)
Translates to: YSLFLHPPPGNP*IFVNNPTKPHA
Trigger: GGCATGGGGCTTTGTAGGGTTGTTGACAAAGATCCAGGGATTTCCGGGTGGAGGATGGAGAAACAGTGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CAA 90 bp TCCTATTCCCCAGCCAGATCCTCTTGGTGCCCATCTAGGGGGTTTCTTAACTGTTTCTCGTGGTCTGAATaGACTGCATGTGTGTGGGTT +
Preference number: 3 (lower is better)
Translates to: SYSPARSSWCPSRGFLNCFSWSE*TACVWV
Trigger: AACCCACACACATGCAGTCAATTCAGACCACGAGAA...ACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CAA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACGGCTGGAAGAGCTCCTaGACAGACTGGATTTTATCA +
Preference number: 3 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHGWKSS*TDWILS
Trigger: TGATAAAATCCAGTCTGTCAAGGAGCTCTTCCAGCC...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp AGCCACCTATCATGCCTCTGGGCTGGAAGAGCTCCTTaGCAGACTGGATTTTATCATGGACCATTCACCTCT +
Preference number: 3 (lower is better)
Translates to: SHLSCLWAGRAP*QTGFYHGPFTS
Trigger: AGAGGTGAATGGTCCATGATAAAATCCAGTCTGTCAAGGAGCTCTTCCAGCCCAGAGGCATGATAGGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp TATGCTATGTCCTATTCCCCAGCCAGATCCTCTTGGTaGCCATCTAGGGGGTTTCTTAACTGTAATGTCGGG +
Preference number: 3 (lower is better)
Translates to: YAMSYSPARSSW*PSRGFLNCNVG
Trigger: CCCGACATTACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGACATAGCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp TTCATTAGGGGCCTATTGCACAGCCTGACTCAGGAATaGAAGAGTCAAAGCAGTCCTCAAACAGACCCTGTG +
Preference number: 3 (lower is better)
Translates to: FIRGLLHSLTQE*KSQSSPQTDPV
Trigger: CACAGGGTCTGTTTGAGGACTGCTTTGACTCTTGCATTCCTGAGTCAGGCTGTGCAATAGGCCCCTAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp ATTATGCCAGAAATAGGTGCACACCCTCAACAGTCATaGGCCCTCACAAATCTCACCTCCTTGCCCCTAATC +
Preference number: 3 (lower is better)
Translates to: IMPEIGAHPQQS*ALTNLTSLPLI
Trigger: GATTAGGGGCAAGGAGGTGAGATTTGTGAGGGCCCATGACTGTTGAGGGTGTGCACCTATTTCTGGCATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CAA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACGACGCTGGACAGTTATaGCCTTTAGTTCTCACTATG +
Preference number: 3 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHDAGQL*PLVLTM
Trigger: CATAGTGAGAACTAAAGGCAATAACTGTCCAGCGTC...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CAA 90 bp TCCTATTCCCCAGCCAGATCCTCTTGGTGCCCATCTAGGGGGTTTCTTAACTGTCTATACTTAATGAGGTaGGGAGGAGATGAACAGCAG +
Preference number: 3 (lower is better)
Translates to: SYSPARSSWCPSRGFLNCLYLMR*GGDEQQ
Trigger: CTGCTGTTCATCTCCTCCCAACCTCATTAAGTATAG...ACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CAA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTAGGAGCTACTGGCAGTaGCTAACTTCTTGGGGAAGG +
Preference number: 3 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPRSYWQ*LTSWGR
Trigger: CCTTCCCCAAGAAGTTAGCAACTGCCAGTAGCTCCT...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CAA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGCTGATTCCAACAACATaGCCCCCACCCCCAGCAACC +
Preference number: 3 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVLIPTT*PPPPAT
Trigger: GGTTGCTGGGGGTGGGGGCAATGTTGTTGGAATCAG...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp ACCCATGCTCCCATGGCTTTCTTCTCATGGGATCAGTaGGCTAGGTTTCTATACAGTGCAGTGTACTTCTGC +
Preference number: 3 (lower is better)
Translates to: THAPMAFFSWDQ*ARFLYSAVYFC
Trigger: GCAGAAGTACACTGCACTGTATAGAAACCTAGCTCACTGATCCCATGAGAAGAAAGCCATGGGAGCATGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp TCTTTACCTCAGTTGTTCAGCTGTGGTCCTCTGAGCTaGGATAGAGATACTATGGGCAAGAGGCAGAGAGAG +
Preference number: 3 (lower is better)
Translates to: SLPQLFSCGPLS*DRDTMGKRQRE
Trigger: CTCTCTCTGCCTCTTGCCCATAGTATCTCTATCTCAGCTCAGAGGACCACAGCTGAACAACTGAGGTAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp CTCTGTCTTTACCTCAGTTGTTCAGCTGTGGTCCTCTaGGCTGAGATAGAGATACTATGGGCAAGAGGCAGA +
Preference number: 3 (lower is better)
Translates to: LCLYLSCSAVVL*AEIEILWARGR
Trigger: TCTGCCTCTTGCCCATAGTATCTCTATCTCAGCTCAGAGGACCACAGCTGAACAACTGAGGTAAAGACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp GGGCTTACAAAGACAGCAGGACACCTAAAAGAGGTGTaGCATGACGCTGGACAGTTATTGCCTTTAGTTCTC +
Preference number: 3 (lower is better)
Translates to: GLTKTAGHLKEV*HDAGQLLPLVL
Trigger: GAGAACTAAAGGCAATAACTGTCCAGCGTCATGGCACACCTCTTTTAGGTGTCCTGCTGTCTTTGTAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp GGGTTGCTCTCAACTTCAGTCAGAGCTGCTTCTTTTTaGAGTGGCACTAGTCTGAGTGCCAAACCAAAATGG +
Preference number: 3 (lower is better)
Translates to: GLLSTSVRAASF*SGTSLSAKPKW
Trigger: CCATTTTGGTTTGGCACTCAGACTAGTGCCACTGCAAAAAGAAGCAGCTCTGACTGAAGTTGAGAGCAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp TTGATCTCTGGGCCTCACTCATTACCAAGGAGCTACTaGCAGTTGCTAACTTCTTGGGGAAGGGAGAATTCT +
Preference number: 3 (lower is better)
Translates to: LISGPHSLPRSY*QLLTSWGRENS
Trigger: AGAATTCTCCCTTCCCCAAGAAGTTAGCAACTGCCAGTAGCTCCTTGGTAATGAGTGAGGCCCAGAGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp GGCTATATATTGCAGCCACCTATCATGCCTCTGGGCTaGAAGAGCTCCTTGACAGACTGGATTTTATCATGG +
Preference number: 3 (lower is better)
Translates to: GYILQPPIMPLG*KSSLTDWILSW
Trigger: CCATGATAAAATCCAGTCTGTCAAGGAGCTCTTCCAGCCCAGAGGCATGATAGGTGGCTGCAATATATAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp CTGTATGCTATGTCCTATTCCCCAGCCAGATCCTCTTaGTGCCCATCTAGGGGGTTTCTTAACTGTAATGTC +
Preference number: 3 (lower is better)
Translates to: LYAMSYSPARSS*CPSRGFLNCNV
Trigger: GACATTACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGACATAGCATACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp GAGGCTTTGGGATATGCTGTAAGTTTTCTAATTCTCTaGTTAGAGACTCCAGGCTCTGTGGCATGGGGAGTG +
Preference number: 3 (lower is better)
Translates to: EALGYAVSFLIL*LETPGSVAWGV
Trigger: CACTCCCCATGCCACAGAGCCTGGAGTCTCTAACCAGAGAATTAGAAAACTTACAGCATATCCCAAAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CAA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACTTCAAAGGCTATATATaGCAGCCACCTATCATGCCT +
Preference number: 3 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHFKGYI*QPPIMP
Trigger: AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAA...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CAA 90 bp TCCTATTCCCCAGCCAGATCCTCTTGGTGCCCATCTAGGGGGTTTCTTAACTGTTCTTCGGTCTGGCTTTaGTTTCTCATTCTGATCTTA +
Preference number: 3 (lower is better)
Translates to: SYSPARSSWCPSRGFLNCSSVWL*FLILIL
Trigger: TAAGATCAGAATGAGAAACAAAAGCCAGACCGAAGA...ACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CAA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTGCAGTTGCTAACTTCTaGGGGAAGGGAGAATTCTTC +
Preference number: 3 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPAVANF*GKGEFF
Trigger: GAAGAATTCTCCCTTCCCCAAGAAGTTAGCAACTGC...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp AGGTCCCTCTCAATACTACTCACAAGTCCACTGTCCTaGAAAGTACTATCTGGATGCATTTCTCGTGGTCTG +
Preference number: 3 (lower is better)
Translates to: RSLSILLTSPLS*KVLSGCISRGL
Trigger: CAGACCACGAGAAATGCATCCAGATAGTACTTTGCAGGACAGTGGACTTGTGAGTAGTATTGAGAGGGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp GGTGGGAGAACTGAGGCTTCAGAAGCAGCCAAACATTaGATGCTATCATGGGGTGAAGATGAAGAATTCATC +
Preference number: 3 (lower is better)
Translates to: GGRTEASEAAKH*MLSWGEDEEFI
Trigger: GATGAATTCTTCATCTTCACCCCATGATAGCATGCAATGTTTGGCTGCTTCTGAAGCCTCAGTTCTCCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp AGAATGCACTCATGCACTCATTATGCCAGAAATAGGTaGACACCCTCAACAGTCATGGGCCCTCACAAATCT +
Preference number: 3 (lower is better)
Translates to: RMHSCTHYARNR*TPSTVMGPHKS
Trigger: AGATTTGTGAGGGCCCATGACTGTTGAGGGTGTGCACCTATTTCTGGCATAATGAGTGCATGAGTGCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp CATGCAACACTGCATGATAACAGCATGACTGGGTTCTaGACCTTCTCCACAGAAAGGAATTCTGTGCATAGC +
Preference number: 3 (lower is better)
Translates to: HATLHDNSMTGF*TFSTERNSVHS
Trigger: GCTATGCACAGAATTCCTTTCTGTGGAGAAGGTCCAGAACCCAGTCATGCTGTTATCATGCAGTGTTGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp CCTGTTGTGAGGGGAAGTTGGCTTATGAGAGCCCTTTaGAATGAATCCTTATGCCAGAAGACAGCTAGTTAC +
Preference number: 3 (lower is better)
Translates to: PVVRGSWLMRAL*NESLCQKTASY
Trigger: GTAACTAGCTGTCTTCTGGCATAAGGATTCATTCCAAAGGGCTCTCATAAGCCAACTTCCCCTCACAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp TATGCCCCTTTCTCTTCTATCTGGAGTGCAGACTCTTaGATGGTGCTGACCTCATTTAAGGCAGGTCTCATT +
Preference number: 3 (lower is better)
Translates to: YAPFSSIWSADS*MVLTSFKAGLI
Trigger: AATGAGACCTGCCTTAAATGAGGTCAGCACCATCCAAGAGTCTGCACTCCAGATAGAAGAGAAAGGGGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp AGGGCTATGATAACAGAAAGGAGCAGGCTTGCAACCTaGGCATTTCATTTCCAAGTAGATTCTCTCCCTCCT +
Preference number: 3 (lower is better)
Translates to: RAMITERSRLAT*AFHFQVDSLPP
Trigger: AGGAGGGAGAGAATCTACTTGGAAATGAAATGCTCAGGTTGCAAGCCTGCTCCTTTCTGTTATCATAGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp CGCTGGGGAAACAGACTCCTGAGACTCCTGAGGTGCTaGTCTAGTATATTGTACAGCAGTAAGCATTTTGTT +
Preference number: 3 (lower is better)
Translates to: RWGNRLLRLLRC*SSILYSSKHFV
Trigger: AACAAAATGCTTACTGCTGTACAATATACTAGATCAGCACCTCAGGAGTCTCAGGAGTCTGTTTCCCCAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp ATGAGTTGTTCTGAGCCAATCTCCAGACCAACATTCTaGCACATCTGCACCTTTGTAAGGCTCCTTTCTCCA +
Preference number: 3 (lower is better)
Translates to: MSCSEPISRPTF*HICTFVRLLSP
Trigger: TGGAGAAAGGAGCCTTACAAAGGTGCAGATGTGTCAGAATGTTGGTCTGGAGATTGGCTCAGAACAACTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp ATCCTTCCCCATTTTCTCAGCACTGCACCTGATTTCTaGTATCACAGAGGTCATTGGTTGATTCCAAACTGC +
Preference number: 3 (lower is better)
Translates to: ILPHFLSTAPDF*YHRGHWLIPNC
Trigger: GCAGTTTGGAATCAACCAATGACCTCTGTGATAGCAGAAATCAGGTGCAGTGCTGAGAAAATGGGGAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp AGACTCTCTGGAGACACTCAACATGATCTCCCCCTATaGTTTCAAGGATATAGCATTAAGAGCCTGGGAAGT +
Preference number: 3 (lower is better)
Translates to: RLSGDTQHDLPL*FQGYSIKSLGS
Trigger: ACTTCCCAGGCTCTTAATGCTATATCCTTGAAAGCATAGGGGGAGATCATGTTGAGTGTCTCCAGAGAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp GACAGTAGCTCAGGATGCTCTGGAGGCTTTGGGATATaGTGTAAGTTTTCTAATTCTCTGGTTAGAGACTCC +
Preference number: 3 (lower is better)
Translates to: DSSSGCSGGFGI*CKFSNSLVRDS
Trigger: GGAGTCTCTAACCAGAGAATTAGAAAACTTACAGCATATCCCAAAGCCTCCAGAGCATCCTGAGCTACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp TGGGTTTATAGTTTGTTACATGCACCCATGCTCCCATaGCTTTCTTCTCATGGGATCAGTGAGCTAGGTTTC +
Preference number: 3 (lower is better)
Translates to: WVYSLLHAPMLP*LSSHGISELGF
Trigger: GAAACCTAGCTCACTGATCCCATGAGAAGAAAGCCATGGGAGCATGGGTGCATGTAACAAACTATAAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp GAGGCTTCAGAAGCAGCCAAACATTGCATGCTATCATaGGGTGAAGATGAAGAATTCATCCAGTGTGAACTC +
Preference number: 3 (lower is better)
Translates to: EASEAAKHCMLS*GEDEEFIQCEL
Trigger: GAGTTCACACTGGATGAATTCTTCATCTTCACCCCATGATAGCATGCAATGTTTGGCTGCTTCTGAAGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp TTCACAGGTGTGAGTTTTCCTGTTGTGAGGGGAAGTTaGCTTATGAGAGCCCTTTGGAATGAATCCTTATGC +
Preference number: 3 (lower is better)
Translates to: FTGVSFPVVRGS*LMRALWNESLC
Trigger: GCATAAGGATTCATTCCAAAGGGCTCTCATAAGCCAACTTCCCCTCACAACAGGAAAACTCACACCTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CAA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGAACAGACCCTGTGCCTaGATGAAGGGAGCAGTGTCG +
Preference number: 3 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRNRPCA*MKGAVS
Trigger: CGACACTGCTCCCTTCATCAAGGCACAGGGTCTGTT...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp TACAAAGACAGCAGGACACCTAAAAGAGGTGTGCCATaGCGCTGGACAGTTATTGCCTTTAGTTCTCACTAT +
Preference number: 3 (lower is better)
Translates to: YKDSRTPKRGVP*RWTVIAFSSHY
Trigger: ATAGTGAGAACTAAAGGCAATAACTGTCCAGCGTCATGGCACACCTCTTTTAGGTGTCCTGCTGTCTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp TATAAGTCTGTGACTACTCATGAGTTTCCCATGCTCTaGTGGATGACTGCACATCCAGGCATATATGGGTAC +
Preference number: 3 (lower is better)
Translates to: YKSVTTHEFPML*WMTAHPGIYGY
Trigger: GTACCCATATATGCCTGGATGTGCAGTCATCCATCAGAGCATGGGAAACTCATGAGTAGTCACAGACTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp GAGAACAGGTGCCTACGAAAGGTTTTGGTGAGCTTCTaGCTTTGTACGGATATCCAGGTGAAAGATAGAAAG +
Preference number: 3 (lower is better)
Translates to: ENRCLRKVLVSF*LCTDIQVKDRK
Trigger: CTTTCTATCTTTCACCTGGATATCCGTACAAAGTCAGAAGCTCACCAAAACCTTTCGTAGGCACCTGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp AGGGAGCAGTGTCGTAAGGAGGGAGGATCTGTAAGATaGATGGATGAAACAGGTAATAAACTGTACCATGGT +
Preference number: 3 (lower is better)
Translates to: REQCRKEGGSVR*MDETGNKLYHG
Trigger: ACCATGGTACAGTTTATTACCTGTTTCATCCATTCATCTTACAGATCCTCCCTCCTTACGACACTGCTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp GGACCATGTGGCACAGAAAGATCAACAAGAAAGGAATaGGTATGTACATGTGTTGGCTTTCTCTTATGCCCC +
Preference number: 3 (lower is better)
Translates to: GPCGTERSTRKE*VCTCVGFLLCP
Trigger: GGGGCATAAGAGAAAGCCAACACATGTACATACTCATTCCTTTCTTGTTGATCTTTCTGTGCCACATGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp CATAGCCATCTGCAAACTAACCCATCTTCAAAGGCATaGGTTGTTCTGAGCCAATCTCCAGACCAACATTCT +
Preference number: 3 (lower is better)
Translates to: HSHLQTNPSSKA*VVLSQSPDQHS
Trigger: AGAATGTTGGTCTGGAGATTGGCTCAGAACAACTCATGCCTTTGAAGATGGGTTAGTTTGCAGATGGCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp ACTACTCACAAGTCCACTGTCCTGCAAAGTACTATCTaGATGCATTTCTCGTGGTCTGAATTGACTGCATGT +
Preference number: 3 (lower is better)
Translates to: TTHKSTVLQSTI*MHFSWSELTAC
Trigger: ACATGCAGTCAATTCAGACCACGAGAAATGCATCCAGATAGTACTTTGCAGGACAGTGGACTTGTGAGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CAA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGGAAGAATTCATAGGATaGGCATTTGCTGCCTGGGAT +
Preference number: 3 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVEEFIG*AFAAWD
Trigger: ATCCCAGGCAGCAAATGCCAATCCTATGAATTCTTC...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp AGACTTTCCAGAATGTGGGTAGGAAACCATGAAATTTaGGAACAGGTGCCTACGAAAGGTTTTGGTGAGCTT +
Preference number: 3 (lower is better)
Translates to: RLSRMWVGNHEI*EQVPTKGFGEL
Trigger: AAGCTCACCAAAACCTTTCGTAGGCACCTGTTCTCAAATTTCATGGTTTCCTACCCACATTCTGGAAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp CTGCTAGCTCAGAGTATGGCTTTCACTAAATACTTCTaGGTCAGTCTGTGGCCTGAATTAGAATGCACTCAT +
Preference number: 3 (lower is better)
Translates to: LLAQSMAFTKYF*VSLWPELECTH
Trigger: ATGAGTGCATTCTAATTCAGGCCACAGACTGACTCAGAAGTATTTAGTGAAAGCCATACTCTGAGCTAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp ATAGGAGAGGGCTATGATAACAGAAAGGAGCAGGCTTaGAACCTGAGCATTTCATTTCCAAGTAGATTCTCT +
Preference number: 3 (lower is better)
Translates to: IGEGYDNRKEQA*NLSISFPSRFS
Trigger: AGAGAATCTACTTGGAAATGAAATGCTCAGGTTGCAAGCCTGCTCCTTTCTGTTATCATAGCCCTCTCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp AAGGCAAAGAGAGTTTATTCTGCAGAAATTACAGCATaGAGGGGTCAACCATTCTTCAAAATGCCAACCCAC +
Preference number: 3 (lower is better)
Translates to: KAKRVYSAEITA*RGQPFFKMPTH
Trigger: GTGGGTTGGCATTTTGAAGAATGGTTGACCCCTGCATGCTGTAATTTCTGCAGAATAAACTCTCTTTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp ACTGTCCTGCAAAGTACTATCTGGATGCATTTCTCGTaGTCTGAATTGACTGCATGTGTGTGGGTTTATAGT +
Preference number: 3 (lower is better)
Translates to: TVLQSTIWMHFS*SELTACVWVYS
Trigger: ACTATAAACCCACACACATGCAGTCAATTCAGACCACGAGAAATGCATCCAGATAGTACTTTGCAGGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp TTCCAAGCAAGGGGTCAAGCTTCAGGTTTTCATGAATaGATTACACATGGTGCTTTCCGTAAGGTACATAAC +
Preference number: 3 (lower is better)
Translates to: FQARGQASGFHE*ITHGAFRKVHN
Trigger: GTTATGTACCTTACGGAAAGCACCATGTGTAATCCATTCATGAAAACCTGAAGCTTGACCCCTTGCTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp ATCATGCCTCTGGGCTGGAAGAGCTCCTTGACAGACTaGATTTTATCATGGACCATTCACCTCTTAAAAATT +
Preference number: 3 (lower is better)
Translates to: IMPLGWKSSLTD*ILSWTIHLLKI
Trigger: AATTTTTAAGAGGTGAATGGTCCATGATAAAATCCAGTCTGTCAAGGAGCTCTTCCAGCCCAGAGGCATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp CTAACGTTATCTAACTTAGCTCTTGCTGAGCATGGCTaGGTTTCCCCTGCAAATACTATTGTTAGTGTCCAA +
Preference number: 3 (lower is better)
Translates to: LTLSNLALAEHG*VSPANTIVSVQ
Trigger: TTGGACACTAACAATAGTATTTGCAGGGGAAACCCAGCCATGCTCAGCAAGAGCTAAGTTAGATAACGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CAA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCACACAGAGGTCATTGGTaGATTCCAAACTGCTTTAGG +
Preference number: 3 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSHRGHW*IPNCFR
Trigger: CCTAAAGCAGTTTGGAATCAACCAATGACCTCTGTG...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp GTACTTCTGCAAAAATTATGGGCTTTATCTCCAATGTaGTCATCTGTGCGACCTGGTTCATGCATTGCTTCT +
Preference number: 3 (lower is better)
Translates to: VLLQKLWALSPM*SSVRPGSCIAS
Trigger: AGAAGCAATGCATGAACCAGGTCGCACAGATGATCACATTGGAGATAAAGCCCATAATTTTTGCAGAAGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp CTGCACCTGATTTCTGCTATCACAGAGGTCATTGGTTaGTTCCAAACTGCTTTAGGTTTCTATCTCTTTCTC +
Preference number: 3 (lower is better)
Translates to: LHLISAITEVIG*FQTALGFYLFL
Trigger: GAGAAAGAGATAGAAACCTAAAGCAGTTTGGAATCAACCAATGACCTCTGTGATAGCAGAAATCAGGTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp TATCAATACTCCACCCTGACCAGGATTAAGGGGCATTaGAGAAATACAGGGAAACAAGAATATAAGAGCTGG +
Preference number: 3 (lower is better)
Translates to: YQYSTLTRIKGH*RNTGKQEYKSW
Trigger: CCAGCTCTTATATTCTTGTTTCCCTGTATTTCTTCAATGCCCCTTAATCCTGGTCAGGGTGGAGTATTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp CAGTCAGAGCTGCTTCTTTTTGCAGTGGCACTAGTCTaGGTGCCAAACCAAAATGGAACATCTATATCAATA +
Preference number: 3 (lower is better)
Translates to: QSELLLFAVALV*VPNQNGTSISI
Trigger: TATTGATATAGATGTTCCATTTTGGTTTGGCACTCAGACTAGTGCCACTGCAAAAAGAAGCAGCTCTGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp GGTCCTGTAGTTATACTGAAGAAATGTGAATCTCCCTaGCATCTTGTTCATCCTGCCACTGTTATACATGCA +
Preference number: 3 (lower is better)
Translates to: GPVVILKKCESP*HLVHPATVIHA
Trigger: TGCATGTATAACAGTGGCAGGATGAACAAGATGTCAGGGAGATTCACATTTCTTCAGTATAACTACAGGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp GGCCATGCTTGTGGAAGCCATTATGTGCCTCTTATTTaGTCACACAACTATATTTATCTGCTAAGAGGGAAA +
Preference number: 3 (lower is better)
Translates to: GHACGSHYVPLI*SHNYIYLLRGK
Trigger: TTTCCCTCTTAGCAGATAAATATAGTTGTGTGAGCAAATAAGAGGCACATAATGGCTTCCACAAGCATGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp AGCACTGCACCTGATTTCTGCTATCACAGAGGTCATTaGTTGATTCCAAACTGCTTTAGGTTTCTATCTCTT +
Preference number: 3 (lower is better)
Translates to: STAPDFCYHRGH*LIPNCFRFLSL
Trigger: AAGAGATAGAAACCTAAAGCAGTTTGGAATCAACCAATGACCTCTGTGATAGCAGAAATCAGGTGCAGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp CATGCTCTGATGGATGACTGCACATCCAGGCATATATaGGTACTACTATTAACTATACTTAATGAGGTTGGG +
Preference number: 3 (lower is better)
Translates to: HALMDDCTSRHI*VLLLTILNEVG
Trigger: CCCAACCTCATTAAGTATAGTTAATAGTAGTACCCATATATGCCTGGATGTGCAGTCATCCATCAGAGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp TTCTCTATAGTCTACCATTCTTTCTTGCTCATCCTCTaGCACTTCCCTATTAGGACCCTATTGCTGAAGAAT +
Preference number: 3 (lower is better)
Translates to: FSIVYHSFLLIL*HFPIRTLLLKN
Trigger: ATTCTTCAGCAATAGGGTCCTAATAGGGAAGTGCCAGAGGATGAGCAAGAAAGAATGGTAGACTATAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CAA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCATGCCCCTTAATGTCTTaGGTTATTCTCTTCCCTTTG +
Preference number: 3 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSCPLMS*VILFPL
Trigger: CAAAGGGAAGAGAATAACCAAAGACATTAAGGGGCA...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CAA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGCCAAACCTGTATTTATaGACAGTACTACCTTTAGCT +
Preference number: 3 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVPNLYL*TVLPLA
Trigger: AGCTAAAGGTAGTACTGTCAATAAATACAGGTTTGG...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CAA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGAGACAATCTGCAAGGTaGTTTAGGAAACTGATTGTT +
Preference number: 3 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVRQSAR*FRKLIV
Trigger: AACAATCAGTTTCCTAAACAACCTTGCAGATTGTCT...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CAA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGTTAGCCACCCATCTTTaGGATAATTTGAGAAGTCAT +
Preference number: 3 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVLATHL*DNLRSH
Trigger: ATGACTTCTCAAATTATCCAAAAGATGGGTGGCTAA...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp AAACCAAAATGGAACATCTATATCAATACTCCACCCTaGCCAGGATTAAGGGGCATTGAAGAAATACAGGGA +
Preference number: 3 (lower is better)
Translates to: KPKWNIYINTPP*PGLRGIEEIQG
Trigger: TCCCTGTATTTCTTCAATGCCCCTTAATCCTGGTCAGGGTGGAGTATTGATATAGATGTTCCATTTTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp GGCTTGGATTTATTATGCAGAGGGATATCTCCTCTGTaGATACTTGAGTTGTGGTTCAAGCCCCTTTATAAA +
Preference number: 3 (lower is better)
Translates to: GLDLLCRGISPL*ILELWFKPLYK
Trigger: TTTATAAAGGGGCTTGAACCACAACTCAAGTATTCACAGAGGAGATATCCCTCTGCATAATAAATCCAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp GTTCCTGAAGTCCATGGTACATTACATAACCTTGTATaGTCTGGGAGGCTGATTTTATCTCTATCTTCACAG +
Preference number: 3 (lower is better)
Translates to: VPEVHGTLHNLV*SGRLILSLSSQ
Trigger: CTGTGAAGATAGAGATAAAATCAGCCTCCCAGATCATACAAGGTTATGTAATGTACCATGGACTTCAGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp TCCCTGACATCTTGTTCATCCTGCCACTGTTATACATaGAAGGGAAGTAGAAAGCTGATCAATATCTATCAT +
Preference number: 3 (lower is better)
Translates to: SLTSCSSCHCYT*KGSRKLINIYH
Trigger: ATGATAGATATTGATCAGCTTTCTACTTCCCTTGCATGTATAACAGTGGCAGGATGAACAAGATGTCAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp CTTGTTTTACAATCACACTCTATGCCAGCTGAAGCTTaGTCTGCCTCAGTGGAAATAAATGCAGAAATAAGA +
Preference number: 3 (lower is better)
Translates to: LVLQSHSMPAEA*SASVEINAEIR
Trigger: TCTTATTTCTGCATTTATTTCCACTGAGGCAGAGCAAGCTTCAGCTGGCATAGAGTGTGATTGTAAAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp GCAATGCTAGTCAAAATCAGATGTCAGGAGAGGTCATaGACACTAAGATGGAATCCACAGGTTTATTTTAGT +
Preference number: 3 (lower is better)
Translates to: AMLVKIRCQERS*TLRWNPQVYFS
Trigger: ACTAAAATAAACCTGTGGATTCCATCTTAGTGTCCATGACCTCTCCTGACATCTGATTTTGACTAGCATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CAA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGCTATCACAGAGGTCATaGGTTGATTCCAAACTGCTT +
Preference number: 3 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRLSQRS*VDSKLL
Trigger: AAGCAGTTTGGAATCAACCAATGACCTCTGTGATAG...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp AAAGTACTATCTGGATGCATTTCTCGTGGTCTGAATTaGCTGCATGTGTGTGGGTTTATAGTTTGTTACATG +
Preference number: 3 (lower is better)
Translates to: KVLSGCISRGLN*LHVCGFIVCYM
Trigger: CATGTAACAAACTATAAACCCACACACATGCAGTCAATTCAGACCACGAGAAATGCATCCAGATAGTACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp CTCAGGTTACTTATTAGGAAATGCAACAGATATTTCTaGCATGTATCTCCAAAAGAAAAGCTCAGTGACGAG +
Preference number: 3 (lower is better)
Translates to: LRLLIRKCNRYF*HVSPKEKLSDE
Trigger: CTCGTCACTGAGCTTTTCTTTTGGAGATACATGGCAGAAATATCTGTTGCATTTCCTAATAAGTAACCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp CTTCTAAATATTTATATCTATACCCATAGGCAGGGTTaGTCTCAACTTCAGTCAGAGCTGCTTCTTTTTGCA +
Preference number: 3 (lower is better)
Translates to: LLNIYIYTHRQG*SQLQSELLLFA
Trigger: TGCAAAAAGAAGCAGCTCTGACTGAAGTTGAGAGCAACCCTGCCTATGGGTATAGATATAAATATTTAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp ATTTTATCCATTCCTTATACGGATTTAGCAGTACACTaGATTCCTGGGAATGTTTTGCTAGTTTCCAGGCTT +
Preference number: 3 (lower is better)
Translates to: ILSIPYTDLAVH*IPGNVLLVSRL
Trigger: AAGCCTGGAAACTAGCAAAACATTCCCAGGAATGCAGTGTACTGCTAAATCCGTATAAGGAATGGATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp TTTTCCTGTTTTACTTCTAGACAGTACATAGCCATCTaGAAACTAACCCATCTTCAAAGGCATGAGTTGTTC +
Preference number: 3 (lower is better)
Translates to: FSCFTSRQYIAI*KLTHLQRHELF
Trigger: GAACAACTCATGCCTTTGAAGATGGGTTAGTTTGCAGATGGCTATGTACTGTCTAGAAGTAAAACAGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR-3UTR CAA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGCTTCTTTTGTCATTCTaGCTCAGATTCTCCATCTCA +
Preference number: 3 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRLLLSF*LRFSIS
Trigger: TGAGATGGAGAATCTGAGCAAGAATGACAAAAGAAG...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp TATTTACTTGAGGTATGTCATCATGAAAGCATGCAATaGTATCTGGGGATGTGGATGAATAGTCTCCTCTTT +
Preference number: 3 (lower is better)
Translates to: YLLEVCHHESMQ*YLGMWMNSLLF
Trigger: AAAGAGGAGACTATTCATCCACATCCCCAGATATCATTGCATGCTTTCATGATGACATACCTCAAGTAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp GATTGTTTCCAGTTCTTTGTTATAGCATTGGAATGCTaGCTTACACAAAGTCCATCTATACTCCCAAAGAGT +
Preference number: 3 (lower is better)
Translates to: DCFQFFVIALEC*LTQSPSILPKS
Trigger: ACTCTTTGGGAGTATAGATGGACTTTGTGTAAGTCAGCATTCCAATGCTATAACAAAGAACTGGAAACAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp TTCTGCATCTACTTGTTGTATTCCTTTGAGCTTTGTTaGGTATCTAATAATCACATTGTAGGATCTGCCTTC +
Preference number: 3 (lower is better)
Translates to: FCIYLLYSFELC*VSNNHIVGSAF
Trigger: GAAGGCAGATCCTACAATGTGATTATTAGATACTCAACAAAGCTCAAAGGAATACAACAAGTAGATGCAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR GCA 72 bp TCAGCTTCATTCTCTCTAAATATAGAGGATAATGTCTaGATCCTTGTCTGGAGCAAAATATGTAAAAGATCC +
Preference number: 3 (lower is better)
Translates to: SASFSLNIEDNV*ILVWSKICKRS
Trigger: GGATCTTTTACATATTTTGCTCCAGACAAGGATGCAGACATTATCCTCTATATTTAGAGAGAATGAAGCTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp TCAGGACACATCATGTCCATGTATTCACATCAATTATaGTCATTTCTGCAAGACCTACATAATATAAAGCCA +
Preference number: 3 (lower is better)
Translates to: SGHIMSMYSHQL*SFLQDLHNIKP
Trigger: TGGCTTTATATTATGTAGGTCTTGCAGAAATGACCATAATTGATGTGAATACATGGACATGATGTGTCCTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR TCA 72 bp AGTATTCCCACTAGTATCCATGCTGCACATGTTCTTTaGCCAACTATGAAAAGAAATTCTTCAGCTTTAAAA +
Preference number: 3 (lower is better)
Translates to: SIPTSIHAAHVL*PTMKRNSSALK
Trigger: TTTTAAAGCTGAAGAATTTCTTTTCATAGTTGGTCAAAGAACATGTGCAGCATGGATACTAGTGGGAATACT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp GTTAATGAAAAATATCTTCCATGTCATCTCACTTGTTaGTTAGGCAGGTGTTTTACACAGGACATCATAATA +
Preference number: 3 (lower is better)
Translates to: VNEKYLPCHLTC*LGRCFTQDIII
Trigger: TATTATGATGTCCTGTGTAAAACACCTGCCTAACCAACAAGTGAGATGACATGGAAGATATTTTTCATTAAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CCA 72 bp TCTCTAAATATAGAGGATAATGTCTGCATCCTTGTCTaGAGCAAAATATGTAAAAGATCCTTGGAAACAGAA +
Preference number: 3 (lower is better)
Translates to: SLNIEDNVCILV*SKICKRSLETE
Trigger: TTCTGTTTCCAAGGATCTTTTACATATTTTGCTCCAGACAAGGATGCAGACATTATCCTCTATATTTAGAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp TCCTATTCCCCAGCCAGATCCTCTTGGTGCCCATCTAGGGGGTTTCTTAACTGTATGACAGGGACCTGGTaGTGCAGACCCCTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: SYSPARSSWCPSRGFLNCMTGTW*CRPLLG
Trigger: CCCGAGGAGGGGTCTGCACCACCAGGTCCCTGTCAT...ACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp ACTCATATATTTAGGACAGATTGGCAGCCTCCCTCATaGTCCACCGGGCCCCACTCAGGGGTGCCAGCACTC +
Preference number: 4 (lower is better)
Translates to: THIFRTDWQPPS*STGPHSGVPAL
Trigger: GAGTGCTGGCACCCCTGAGTGGGGCCCGGTGGACAATGAGGGAGGCTGCCAATCTGTCCTAAATATATGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACACTCCTCAGGGCTGCTaGTCTGGGGTGCAGACACAG +
Preference number: 4 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHTPQGC*SGVQTQ
Trigger: CTGTGTCTGCACCCCAGATCAGCAGCCCTGAGGAGT...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp TCCTATTCCCCAGCCAGATCCTCTTGGTGCCCATCTAGGGGGTTTCTTAACTGTAAACTGATCAGGGGCTaGTGCAGAGCCACCAGCGCA +
Preference number: 4 (lower is better)
Translates to: SYSPARSSWCPSRGFLNCKLIRG*CRATSA
Trigger: TGCGCTGGTGGCTCTGCAGCAGCCCCTGATCAGTTT...ACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp TCCTATTCCCCAGCCAGATCCTCTTGGTGCCCATCTAGGGGGTTTCTTAACTGTAAGAGAGTCCAGCCCTaGCAGGTGTCTCCTTGGGTA +
Preference number: 4 (lower is better)
Translates to: SYSPARSSWCPSRGFLNCKRVQP*QVSPWV
Trigger: TACCCAAGGAGACACCTGCCAGGGCTGGACTCTCTT...ACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGGCTGGTGAGGTACTCTaGGTTCCGGATGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWAGEVL*VPDVQG
Trigger: TCCCTGGACATCCGGAACTCAGAGTACCTCACCAGC...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp TCCTATTCCCCAGCCAGATCCTCTTGGTGCCCATCTAGGGGGTTTCTTAACTGTTGTCTGGGCCACCTTTaGCTAACCAGGAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: SYSPARSSWCPSRGFLNCCLGHL*LTRNLF
Trigger: GAAGAGGTTCCTGGTTAGGCAAAGGTGGCCCAGACA...ACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGCAGTGGGGCACACGGTaGCTGCTTCATGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWQWGTR*LLHVWP
Trigger: AGGCCAAACATGAAGCAGGCACCGTGTGCCCCACTG...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGGGAAGTAGTCGAACATaGCAGGGACCTGGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWGSSRT*QGPGGA
Trigger: TGCACCACCAGGTCCCTGTCATGTTCGACTACTTCC...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp TCCTATTCCCCAGCCAGATCCTCTTGGTGCCCATCTAGGGGGTTTCTTAACTGTGATCAGCATTATCCCTaGAGGTCAGCTGCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: SYSPARSSWCPSRGFLNCDQHYP*RSAAKG
Trigger: CCCTTTTGCAGCTGACCTTCAGGGATAATGCTGATC...ACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTAACATGACAGGGACCTaGTGGTGCAGACCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPNMTGT*WCRPLL
Trigger: GAGGAGGGGTCTGCACCACCAGGTCCCTGTCATGTT...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTAATGGTGGGCTGTTCTaGTCCTGTGTCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPNGGLF*SCVWAT
Trigger: GGTGGCCCAGACACAGGACCAGAACAGCCCACCATT...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp TCCTATTCCCCAGCCAGATCCTCTTGGTGCCCATCTAGGGGGTTTCTTAACTGTGGGTGTTGGCAGTGTTaGGTAGAGCATGGAACACAT +
Preference number: 4 (lower is better)
Translates to: SYSPARSSWCPSRGFLNCGCWQC*VEHGTH
Trigger: ATGTGTTCCATGCTCTACCCAACACTGCCAACACCC...ACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp TCCCTTGGAGTCTCTGGAGCATTCAAAGGCTATATATaGCAGCCACCTATCATGCCTCTGGGCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SLGVSGAFKGYI*QPPIMPLGWKS
Trigger: GCTCTTCCAGCCCAGAGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACATAGAAGCTTCCCTCTaGGGAAGTTGGCTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHIEASL*GSWLAV
Trigger: TACTGCAAGCCAACTTCCTCAGAGGGAAGCTTCTAT...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTCAGAGCCATCAGATGTaGAGCCAGCCAGGCAAGATC +
Preference number: 4 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPQSHQM*SQPGKI
Trigger: GATCTTGCCTGGCTGGCTTCACATCTGATGGCTCTG...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp TTTGCTCTTGCATTCAAGGCTAATCCAGCATTTCTTTGGAAGTGCATCAGCAGGGAGGAAAGAGAAGCCTaGATGCCACTGGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: FALAFKANPAFLWKCISREEREA*MPLGRL
Trigger: GAGCCTGCCCAGTGGCATTCAGGCTTCTCTTTCCTC...CCTGCTGATGCACTTCCAAAGAAATGCTGGATTAGCCTTGAATGCAAGAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACCTGTGTGTCTGTCCTTaGGGGCGGTTTTACACATTT +
Preference number: 4 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHLCVCP*GRFYTF
Trigger: AAATGTGTAAAACCGCCCTCAAGGACAGACACACAG...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACAGATCCTTGCTGATCTaGTCTGCTATCTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHRSLLI*SAIFSG
Trigger: CCCAGAGAAGATAGCAGAGCAGATCAGCAAGGATCT...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTGTGGTGACTTGGGAGTaGAGGGTTACTGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPVVTWE*RVTVSR
Trigger: CCTGGACACAGTAACCCTGCACTCCCAAGTCACCAC...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp TCCTATTCCCCAGCCAGATCCTCTTGGTGCCCATCTAGGGGGTTTCTTAACTGTTGCAGTTTCCCCTGCTaGTCTATGAAAAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: SYSPARSSWCPSRGFLNCCSFPC*SMKRPG
Trigger: TCCAGGTCTTTTCATAGAGCAGCAGGGGAAACTGCA...ACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp CAATTATCCCATTGTCACTATGGGAGAGGTGCCAGGTaGCCAGTACTCAGGGGGACTTCTATAAAGATGGGG +
Preference number: 4 (lower is better)
Translates to: QLSHCHYGRGAR*PVLRGTSIKMG
Trigger: CCCCATCTTTATAGAAGTCCCCCTGAGTACTGGCAACCTGGCACCTCTCCCATAGTGACAATGGGATAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp TGTTTCTCCATCCTCCACCCGGAAATCCCTGGATCTTaGTCAACAACCCTACAAAGCCCCATGCCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: CFSILHPEIPGS*STTLQSPMPAN
Trigger: ATTTGCTGGCATGGGGCTTTGTAGGGTTGTTGACAAAGATCCAGGGATTTCCGGGTGGAGGATGGAGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACTGTATCAGGTTTTCCTaGAAGGTCAAGACTGCGAGT +
Preference number: 4 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHCIRFS*KVKTAS
Trigger: ACTCGCAGTCTTGACCTTTCAGGAAAACCTGATACA...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCAAGGGCTCAGCAGGGGTaGGCTTCAGGCTTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSRAQQG*ASGLAG
Trigger: TCCTGCTAAGCCTGAAGCTCACCCCTGCTGAGCCCT...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTGGTGAGACGCAGCCCTaGCTTCAGAGATGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPGETQP*LQRCCY
Trigger: ATAACAGCATCTCTGAAGTCAGGGCTGCGTCTCACC...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp TCCTATTCCCCAGCCAGATCCTCTTGGTGCCCATCTAGGGGGTTTCTTAACTGTGTGAGGTCCAGACAATaGCAAGAATGTGTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: SYSPARSSWCPSRGFLNCVRSRQ*QECVEF
Trigger: AAACTCCACACATTCTTGTCATTGTCTGGACCTCAC...ACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTAAAGAGAAGCCTGAATaGCACTGGGCAGGCTCGTGT +
Preference number: 4 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPKEKPE*HWAGSC
Trigger: ACACGAGCCTGCCCAGTGGCATTCAGGCTTCTCTTT...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CCTCCTTCTGCTAGGGAGAGTTTCTCTCAGTCTTCTCTATTTCAGAGAGGAATTAGACGTCACGATCACTaGGTAACTCCAGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PPSARESFSQSSLFQRGIRRHDH*VTPGLC
Trigger: GCAGAGCCCTGGAGTTACCCAGTGATCGTGACGTCT...AATTCCTCTCTGAAATAGAGAAGACTGAGAGAAACTCTCCCTAGCAGAAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACATGTTGCCAAGAGAATaGCCGATGAAGCTAATTCGG +
Preference number: 4 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHMLPRE*PMKLIR
Trigger: CCGAATTAGCTTCATCGGCCATTCTCTTGGCAACAT...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGAGTGCAGGTCCACCTTaGGCTGAAACTCGACCTCAC +
Preference number: 4 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVSAGPP*AETRPH
Trigger: GTGAGGTCGAGTTTCAGCTCAAGGTGGACCTGCACT...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp TTTGCTCTTGCATTCAAGGCTAATCCAGCATTTCTTTGGAAGTGCATCAGCAGGAGGGACAGCTGGCTGTaGGTCTGTATCAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: FALAFKANPAFLWKCISRRDSWL*VCIRFS
Trigger: GGAAAACCTGATACAGACTCACAGCCAGCTGTCCCT...CCTGCTGATGCACTTCCAAAGAAATGCTGGATTAGCCTTGAATGCAAGAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGATGGAGGCATGCTGGTaGGGTACTCTGAGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVMEACW*GTLSSG
Trigger: TCCGGAACTCAGAGTACCTCACCAGCATGCCTCCAT...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGTCCCCTGCTGCTCTATaGAAAGACCTGGACTTAGAA +
Preference number: 4 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWSPAAL*KDLDLE
Trigger: TTCTAAGTCCAGGTCTTTTCATAGAGCAGCAGGGGA...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp TTTGCTCTTGCATTCAAGGCTAATCCAGCATTTCTTTGGAAGTGCATCAGCAGGTACAGAGTCCCCAGGTaGGGTCCAGACAATGACAAG +
Preference number: 4 (lower is better)
Translates to: FALAFKANPAFLWKCISRYRVPR*GPDNDK
Trigger: CTTGTCATTGTCTGGACCTCACCTGGGGACTCTGTA...CCTGCTGATGCACTTCCAAAGAAATGCTGGATTAGCCTTGAATGCAAGAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp CCTCCTTCTGCTAGGGAGAGTTTCTCTCAGTCTTCTCTATTTCAGAGAGGAATTAGGCTGAATGCAGACTaGTGCTCTCTGACTGTCCGA +
Preference number: 4 (lower is better)
Translates to: PPSARESFSQSSLFQRGIRLNAD*CSLTVR
Trigger: TCGGACAGTCAGAGAGCAGCAGTCTGCATTCAGCCT...AATTCCTCTCTGAAATAGAGAAGACTGAGAGAAACTCTCCCTAGCAGAAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGAATGTCCAGGCACTCTaGGGGCAATGGAGGCATGCT +
Preference number: 4 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVNVQAL*GQWRHA
Trigger: AGCATGCCTCCATTGCCCGCAGAGTGCCTGGACATT...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGTTCGGGTTTACCTTTTaGAGTTTCCCCTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWFGFTF*SFPCCS
Trigger: AGAGCAGCAGGGGAAACTGCAAAAGGTAAACCCGAA...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCACCTCCAGCTCCATGGTaGGCAGCTCAGGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSPPAPW*AAQECL
Trigger: GAGACATTCCTGAGCTGCCCACCATGGAGCTGGAGG...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCAGAGCCTCCAGCTCCATaGTGGGCAGCTCAGGAATGT +
Preference number: 4 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSEPPAP*WAAQEC
Trigger: ACATTCCTGAGCTGCCCACCATGGAGCTGGAGGCTC...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp TTTGCTCTTGCATTCAAGGCTAATCCAGCATTTCTTTGGAAGTGCATCAGCAGGACAGGCTTTCCATCCTaGTTGACTCCCCTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: FALAFKANPAFLWKCISRTGFPS*LTPLPR
Trigger: TCTAGGGAGGGGAGTCAACCAGGATGGAAAGCCTGT...CCTGCTGATGCACTTCCAAAGAAATGCTGGATTAGCCTTGAATGCAAGAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGCTCCTTGGGTACAGATaGGAAAGGGAGACATGTGGC +
Preference number: 4 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVLLGYR*ERETCG
Trigger: GCCACATGTCTCCCTTTCTCATCTGTACCCAAGGAG...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CCTCCTTCTGCTAGGGAGAGTTTCTCTCAGTCTTCTCTATTTCAGAGAGGAATTATGTGTGGAGTTTGTTaGGGTAATACCGGAACCGGG +
Preference number: 4 (lower is better)
Translates to: PPSARESFSQSSLFQRGIMCGVC*GNTGTG
Trigger: CCCGGTTCCGGTATTACCTCAACAAACTCCACACAT...AATTCCTCTCTGAAATAGAGAAGACTGAGAGAAACTCTCCCTAGCAGAAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGTGGAAGACACGACTGTaGACAGCACTCTCGTGGACA +
Preference number: 4 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVWKTRL*TALSWT
Trigger: TGTCCACGAGAGTGCTGTGCACAGTCGTGTCTTCCA...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGCTCCTCGGGTGGAAGTaGAGACCAAGTGTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRLLGWK*RPSVRL
Trigger: CAGCCGCACACTTGGTCTGCACTTCCACCCGAGGAG...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGCTGAAAGGTCAAGACTaGGAGTTTTTGGTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWLKGQD*EFLVLH
Trigger: ATGGAGCACCAAAAACTCGCAGTCTTGACCTTTCAG...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACATCTTCAGGTATGCCTaGTCTGTTTTGAAATTCACC +
Preference number: 4 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHIFRYA*SVLKFT
Trigger: GGTGAATTTCAAAACAGAGCAGGCATACCTGAAGAT...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGAAAGAGTTCCTGTGGTaGGCATGCCTTCGAACCACC +
Preference number: 4 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVKEFLW*ACLRTT
Trigger: GGTGGTTCGAAGGCATGCGCACCACAGGAACTCTTT...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp GAACTGTTGTCTTCAGGACACATCATGTCCATGTATTCACATCAATTATGGTCAGGAGGTCTGCACTGTTaGCATCCAGGCCATGGACAC +
Preference number: 4 (lower is better)
Translates to: ELLSSGHIMSMYSHQLWSGGLHC*HPGHGH
Trigger: GTGTCCATGGCCTGGATGGCAACAGTGCAGACCTCC...TGACCATAATTGATGTGAATACATGGACATGATGTGTCCTGAAGACAACAGTTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGGAAGCACTCAGCCTGTaGGGGATCCTTGAAGACACT +
Preference number: 4 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVEALSL*GILEDT
Trigger: AGTGTCTTCAAGGATCCCCCACAGGCTGAGTGCTTC...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACTTTCTGTATAAGATCTaGAAGACACGACTGTGCACA +
Preference number: 4 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHFLYKI*KTRLCT
Trigger: TGTGCACAGTCGTGTCTTCCAGATCTTATACAGAAA...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp TTTGCTCTTGCATTCAAGGCTAATCCAGCATTTCTTTGGAAGTGCATCAGCAGGACTGTGTCCAGGAATTaGGTCCACAGAGCCATCAGA +
Preference number: 4 (lower is better)
Translates to: FALAFKANPAFLWKCISRTVSRN*VHRAIR
Trigger: TCTGATGGCTCTGTGGACCCAATTCCTGGACACAGT...CCTGCTGATGCACTTCCAAAGAAATGCTGGATTAGCCTTGAATGCAAGAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CCTCCTTCTGCTAGGGAGAGTTTCTCTCAGTCTTCTCTATTTCAGAGAGGAATTTCTGGCTCTTCAGCATaGTCAGGCTGGGAAGGTTTA +
Preference number: 4 (lower is better)
Translates to: PPSARESFSQSSLFQRGISGSSA*SGWEGL
Trigger: TAAACCTTCCCAGCCTGACCATGCTGAAGAGCCAGA...AATTCCTCTCTGAAATAGAGAAGACTGAGAGAAACTCTCCCTAGCAGAAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTTCTGTGGAGTTCAAGTaGGACCCAGAGATGGAAGTT +
Preference number: 4 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPSVEFK*DPEMEV
Trigger: AACTTCCATCTCTGGGTCCCACTTGAACTCCACAGA...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp TTTGCTCTTGCATTCAAGGCTAATCCAGCATTTCTTTGGAAGTGCATCAGCAGGTGGCAGGTGTCTCCTTaGGTACAGATGAGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: FALAFKANPAFLWKCISRWQVSP*VQMRKG
Trigger: TCCCTTTCTCATCTGTACCCAAGGAGACACCTGCCA...CCTGCTGATGCACTTCCAAAGAAATGCTGGATTAGCCTTGAATGCAAGAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGGAGCTGGGTTTTGTTTaGAAGAGAGTCCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVELGFV*KRVQPW
Trigger: CCAGGGCTGGACTCTCTTCCAAACAAAACCCAGCTC...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGTCAAAGTGCAGTCCTTaGCTTCTACCAGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVSKCSP*LLPEGP
Trigger: TGGGCCCTCTGGTAGAAGCCAAGGACTGCACTTTGA...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp ACTATCTATGTTCCAGGAATAATGCGATTGGGCGGTTaGAGAAAAGTGAAGGATGACAGGGACCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TIYVPGIMRLGG*RKVKDDRDQGP
Trigger: AGGACCCTGGTCCCTGTCATCCTTCACTTTTCTCAAACCGCCCAATCGCATTATTCCTGGAACATAGATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTATGCCTGCTCTGTTTTaGAATTCACCAATGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPMPALF*NSPMVR
Trigger: CCTGACCATTGGTGAATTTCAAAACAGAGCAGGCAT...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCAACCATAGCTCTCCCTTaGGCTCCTGTGTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSTIALP*APVFML
Trigger: CAGCATGAACACAGGAGCTCAAGGGAGAGCTATGGT...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTCTCTTCAAAAGGCAATaGGCTGATGGAGGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPLFKRQ*ADGGKR
Trigger: TCTCTTTCCTCCATCAGCTCATTGCCTTTTGAAGAG...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp CCTCCTTCTGCTAGGGAGAGTTTCTCTCAGTCTTCTCTATTTCAGAGAGGAATTACATCTCTCAGCTGCTaGTCACTATCGGTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: PPSARESFSQSSLFQRGITSLSC*SLSVKC
Trigger: GCACTTTACCGATAGTGAGCAGCAGCTGAGAGATGT...AATTCCTCTCTGAAATAGAGAAGACTGAGAGAAACTCTCCCTAGCAGAAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGCCGGTGCCACTTGTGTaGATGTTGTATGCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVPVPLV*MLYAVL
Trigger: GAGAACTGCATACAACATGCACACAAGTGGCACCGG...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGGGTAAAGGAAACATTTaGGCAGATCAGCATTATCCC +
Preference number: 4 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWGKGNI*ADQHYP
Trigger: GGGATAATGCTGATCTGCGCAAATGTTTCCTTTACC...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CCTCCTTCTGCTAGGGAGAGTTTCTCTCAGTCTTCTCTATTTCAGAGAGGAATTTGCCTGCTTCATGTTTaGCCTCCAGAGAGGCATTAT +
Preference number: 4 (lower is better)
Translates to: PPSARESFSQSSLFQRGICLLHV*PPERHY
Trigger: ATAATGCCTCTCTGGAGGCCAAACATGAAGCAGGCA...AATTCCTCTCTGAAATAGAGAAGACTGAGAGAAACTCTCCCTAGCAGAAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTCTCCTCTTCCTCTGGTaGGAAATATGGTATGTCAGA +
Preference number: 4 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPLLFLW*EIWYVR
Trigger: TCTGACATACCATATTTCCCACCAGAGGAAGAGGAG...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACTACACATTTCAATCCTaGCTGAATGAAATGGCACAT +
Preference number: 4 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHYTFQS*LNEMAH
Trigger: ATGTGCCATTTCATTCAGCCAGGATTGAAATGTGTA...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp TTTGCTCTTGCATTCAAGGCTAATCCAGCATTTCTTTGGAAGTGCATCAGCAGGCATTTCTGCATACACTaGCCCTGTGTGTCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: FALAFKANPAFLWKCISRHFCIH*PCVSVL
Trigger: AAGGACAGACACACAGGGCCAGTGTATGCAGAAATG...CCTGCTGATGCACTTCCAAAGAAATGCTGGATTAGCCTTGAATGCAAGAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp TTGCTGAGCATGGCTGGGTTTCCCCTGCAAATACTATaGTTAGTGTCCAAGAATCAATGGAGAAGAACCCCA +
Preference number: 4 (lower is better)
Translates to: LLSMAGFPLQIL*LVSKNQWRRTP
Trigger: TGGGGTTCTTCTCCATTGATTCTTGGACACTAACAATAGTATTTGCAGGGGAAACCCAGCCATGCTCAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTAACTCTGAGCACAGCTaGGAAAGTGTTTCTTCAACA +
Preference number: 4 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPNSEHS*ESVSST
Trigger: TGTTGAAGAAACACTTTCTCAGCTGTGCTCAGAGTT...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGTTCACTTTCAATGCCTaGATCAGATATTATGGAGGC +
Preference number: 4 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWFTFNA*IRYYGG
Trigger: GCCTCCATAATATCTGATTCAGGCATTGAAAGTGAA...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp GAACTGTTGTCTTCAGGACACATCATGTCCATGTATTCACATCAATTATGGTCACAGCTGGTGAACAACTaGTTTCAGGCACCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: ELLSSGHIMSMYSHQLWSQLVNN*FQAPCG
Trigger: ACCACAGGGTGCCTGAAATCAGTTGTTCACCAGCTG...TGACCATAATTGATGTGAATACATGGACATGATGTGTCCTGAAGACAACAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp GAACTGTTGTCTTCAGGACACATCATGTCCATGTATTCACATCAATTATGGTCAGGAGTCCCAGTTCTATaGATGTCTTCACCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: ELLSSGHIMSMYSHQLWSGVPVL*MSSPAG
Trigger: TCCGGCTGGTGAAGACATTCATAGAACTGGGACTCC...TGACCATAATTGATGTGAATACATGGACATGATGTGTCCTGAAGACAACAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CCTCCTTCTGCTAGGGAGAGTTTCTCTCAGTCTTCTCTATTTCAGAGAGGAATTCATTTCAATCCTGGCTaGATGAAATGGCACATAGCG +
Preference number: 4 (lower is better)
Translates to: PPSARESFSQSSLFQRGIHFNPG*MKWHIA
Trigger: CGCTATGTGCCATTTCATTCAGCCAGGATTGAAATG...AATTCCTCTCTGAAATAGAGAAGACTGAGAGAAACTCTCCCTAGCAGAAGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CCTCCTTCTGCTAGGGAGAGTTTCTCTCAGTCTTCTCTATTTCAGAGAGGAATTGGAACACATTATGTCTaGTCAAAGTGCAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PPSARESFSQSSLFQRGIGTHYV*SKCSPW
Trigger: CCAAGGACTGCACTTTGATCAGACATAATGTGTTCC...AATTCCTCTCTGAAATAGAGAAGACTGAGAGAAACTCTCCCTAGCAGAAGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp GAACTGTTGTCTTCAGGACACATCATGTCCATGTATTCACATCAATTATGGTCACTGAATGCAGACTGCTaGTCTCTGACTGTCCGACGA +
Preference number: 4 (lower is better)
Translates to: ELLSSGHIMSMYSHQLWSLNADC*SLTVRR
Trigger: TCGTCGGACAGTCAGAGAGCAGCAGTCTGCATTCAG...TGACCATAATTGATGTGAATACATGGACATGATGTGTCCTGAAGACAACAGTTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGCTGAGGAAGTTGGCTTaGAGTATCCAGCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVLRKLA*SIQLQR
Trigger: TCTTTGGAGCTGGATACTGCAAGCCAACTTCCTCAG...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGATCAATATAGGTCAGTaGTGGGGTCTGCCCTTCATC +
Preference number: 4 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVINIGQ*WGLPFI
Trigger: GATGAAGGGCAGACCCCAGCACTGACCTATATTGAT...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp TCCTATTCCCCAGCCAGATCCTCTTGGTGCCCATCTAGGGGGTTTCTTAACTGTCATGGTATCAAAATCTaGAAATGTATCCGTCTGATT +
Preference number: 4 (lower is better)
Translates to: SYSPARSSWCPSRGFLNCHGIKI*KCIRLI
Trigger: AATCAGACGGATACATTTGCAGATTTTGATACCATG...ACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTCAGAGATGCTGTTATTaGAGAGCACGCATTTACTCA +
Preference number: 4 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPQRCCY*RARIYS
Trigger: TGAGTAAATGCGTGCTCTCCAATAACAGCATCTCTG...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCAAGTGGGACCCAGAGATaGAAGTTCCTGTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSSGTQR*KFLSSA
Trigger: AGCTGAAGACAGGAACTTCCATCTCTGGGTCCCACT...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGATGAGTAATAGGAGCTaGGTTTTGTTTGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWMSNRS*VLFGRE
Trigger: CTCTCTTCCAAACAAAACCCAGCTCCTATTACTCAT...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp CACCTAAAAGAGGTGTGCCATGACGCTGGACAGTTATaGCCTTTAGTTCTCACTATGTCCAGACAGCATATT +
Preference number: 4 (lower is better)
Translates to: HLKEVCHDAGQL*PLVLTMSRQHI
Trigger: AATATGCTGTCTGGACATAGTGAGAACTAAAGGCAATAACTGTCCAGCGTCATGGCACACCTCTTTTAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTaGTGTGTATTGTGCAAAGAGAGAGAGTTATGCACC +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCVCVY*CVLCKERELCT
Trigger: GGTGCATAACTCTCTCTCTTTGCACAATACACACAAATACACACACACACACACACACACACACACACACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp CTATGGGCAAGAGGCAGAGAGAGTATGCCAAGGCTATaGTTACTGGTAATTTCTCCTAGGAATGGAAATGGA +
Preference number: 4 (lower is better)
Translates to: LWARGRESMPRL*LLVISPRNGNG
Trigger: TCCATTTCCATTCCTAGGAGAAATTACCAGTAACAATAGCCTTGGCATACTCTCTCTGCCTCTTGCCCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp TTCTCTACCACTATCTATGTTCCAGGAATAATGCGATaGGGCGGTTTGAGAAAAGTGAAGGATGACAGGGAC +
Preference number: 4 (lower is better)
Translates to: FSTTIYVPGIMR*GGLRKVKDDRD
Trigger: GTCCCTGTCATCCTTCACTTTTCTCAAACCGCCCAATCGCATTATTCCTGGAACATAGATAGTGGTAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp GGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTaGGGTAGATGGACCATTTCTAATGTTTTCTGCATC +
Preference number: 4 (lower is better)
Translates to: GSLFSTWSSAQL*GRWTISNVFCI
Trigger: GATGCAGAAAACATTAGAAATGGTCCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGCCTGTGGGGGATCCTTaGAGACACTTTCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRPVGDP*RHFQGH
Trigger: GTGACCTTGAAAGTGTCTTCAAGGATCCCCCACAGG...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGTGCACAGCACTCTCGTaGACACAGGCTGAATGCAGA +
Preference number: 4 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRCTALS*TQAECR
Trigger: TCTGCATTCAGCCTGTGTCCACGAGAGTGCTGTGCA...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTGCATGGCGTCATTTATaGAAACTTCTTCGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPAWRHL*KLLRFC
Trigger: ACAGAAACGAAGAAGTTTCCATAAATGACGCCATGC...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp GAACTGTTGTCTTCAGGACACATCATGTCCATGTATTCACATCAATTATGGTCAAAGCCTGAATGCCACTaGGCAGGCTCGTGTTACTTT +
Preference number: 4 (lower is better)
Translates to: ELLSSGHIMSMYSHQLWSKPECH*AGSCYF
Trigger: AAAGTAACACGAGCCTGCCCAGTGGCATTCAGGCTT...TGACCATAATTGATGTGAATACATGGACATGATGTGTCCTGAAGACAACAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CCTCCTTCTGCTAGGGAGAGTTTCTCTCAGTCTTCTCTATTTCAGAGAGGAATTAGAAGTGTGTCTGGGTaGACTGTTTTCTTTGCTAGA +
Preference number: 4 (lower is better)
Translates to: PPSARESFSQSSLFQRGIRSVSG*TVFFAR
Trigger: TCTAGCAAAGAAAACAGTCCACCCAGACACACTTCT...AATTCCTCTCTGAAATAGAGAAGACTGAGAGAAACTCTCCCTAGCAGAAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCAAGAAAGGGAGACATGTaGCAGTGCAAGACACAGACA +
Preference number: 4 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSRKGDM*QCKTQT
Trigger: TGTCTGTGTCTTGCACTGCCACATGTCTCCCTTTCT...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp AGTGGAAAAGCTTTACAGTTTAAGGATTCTAGGAACTaGTACAGACAGAGGACAGTAGCTCAGGATGCTCTG +
Preference number: 4 (lower is better)
Translates to: SGKALQFKDSRN*YRQRTVAQDAL
Trigger: CAGAGCATCCTGAGCTACTGTCCTCTGTCTGTACAAGTTCCTAGAATCCTTAAACTGTAAAGCTTTTCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCAGTACACCTGAGATTCTaGGCACACATCGATAGGATT +
Preference number: 4 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSVHLRF*AHIDRI
Trigger: AATCCTATCGATGTGTGCTCAGAATCTCAGGTGTAC...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCAATTCTGGCTTGTTCCTaGTACAACTTTGCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSILACS*YNFAWH
Trigger: GTGCCAAGCAAAGTTGTAGCAGGAACAAGCCAGAAT...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGGTCCAATCAGGGTGTTaGCAGTGTTGGGTAGAGCAT +
Preference number: 4 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRVQSGC*QCWVEH
Trigger: ATGCTCTACCCAACACTGCCAACACCCTGATTGGAC...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp TACTGTTCATGGAGCCTTGAATTACCCAGTACTGAGTaGTTCTTACATCATTTTCAGTTGCTCTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: YCSWSLELPSTE*FLHHFQLLWLR
Trigger: TCTCAGCCAGAGCAACTGAAAATGATGTAAGAACAACTCAGTACTGGGTAATTCAAGGCTCCATGAACAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp TGGCCATGCTTGTGGAAGCCATTATGTGCCTCTTATTaGCTCACACAACTATATTTATCTGCTAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: WPCLWKPLCASY*LTQLYLSAKRE
Trigger: TTCCCTCTTAGCAGATAAATATAGTTGTGTGAGCAAATAAGAGGCACATAATGGCTTCCACAAGCATGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGAGGCAAGATCCTTGCTaGTCTGCTCTGCTATCTTCT +
Preference number: 4 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRRQDPC*SALLSS
Trigger: AGAAGATAGCAGAGCAGATCAGCAAGGATCTTGCCT...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR TCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGGTGTTACTTTCTGTGTaGCCACCCTCCAAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRVLLSV*PPSKEF
Trigger: GAACTCTTTGGAGGGTGGTCACACAGAAAGTAACAC...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTTTGGTTCACTTTCAATaGCTGAATCAGATATTATGG +
Preference number: 4 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPLVHFQ*LNQILW
Trigger: CCATAATATCTGATTCAGGCATTGAAAGTGAACCAA...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp TTTGCTCTTGCATTCAAGGCTAATCCAGCATTTCTTTGGAAGTGCATCAGCAGGATCTTCAGAAAAACCTaGTGTGTTCTTTATGGTGTC +
Preference number: 4 (lower is better)
Translates to: FALAFKANPAFLWKCISRIFRKT*CVLYGV
Trigger: GACACCATAAAGAACACAGCAGGTTTTTCTGAAGAT...CCTGCTGATGCACTTCCAAAGAAATGCTGGATTAGCCTTGAATGCAAGAGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp GAACTGTTGTCTTCAGGACACATCATGTCCATGTATTCACATCAATTATGGTCAGTTGTTGATCATTTCTaGATACACTGGCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: ELLSSGHIMSMYSHQLWSVVDHF*IHWPCV
Trigger: CACACAGGGCCAGTGTATGCAGAAATGATCAACAAC...TGACCATAATTGATGTGAATACATGGACATGATGTGTCCTGAAGACAACAGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGAGTTTTCCAGAGAAATaGTGGGCTGTTCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRSFPEK*WAVLVL
Trigger: CAGGACCAGAACAGCCCACCATTTCTCTGGAAAACT...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCAGATTTCTTCAGTTTCTaGATGAGCCACAAACCAGTA +
Preference number: 4 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSDFFSF*MSHKPV
Trigger: TACTGGTTTGTGGCTCATGCAGAAACTGAAGAAATC...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGTTTGAAATTCACCAATaGTCAGGTACACCTGAGATT +
Preference number: 4 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVFEIHQ*SGTPEI
Trigger: AATCTCAGGTGTACCTGACCATTGGTGAATTTCAAA...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCATGCTACAACTTTGCTTaGCACAGTCTTAACAATACC +
Preference number: 4 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSCYNFA*HSLNNT
Trigger: GGTATTGTTAAGACTGTGCCAAGCAAAGTTGTAGCA...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp TTTGCTCTTGCATTCAAGGCTAATCCAGCATTTCTTTGGAAGTGCATCAGCAGGTTTGGTTTAAAGAGGTaGAATTATTCTGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: FALAFKANPAFLWKCISRFGLKR*NYSGLF
Trigger: GAACAAGCCAGAATAATTCCACCTCTTTAAACCAAA...CCTGCTGATGCACTTCCAAAGAAATGCTGGATTAGCCTTGAATGCAAGAGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGTTCCTCCTCTTCCTCTaGTGGGAAATATGGTATGTC +
Preference number: 4 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRFLLFL*WEIWYV
Trigger: GACATACCATATTTCCCACCAGAGGAAGAGGAGGAA...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp GAGCAGCAGCTGGCCATGTTAATGGTTTTGAATTTTTaGCTCTTGCATTCAAGGCTAATCCAGCATTTCTTT +
Preference number: 4 (lower is better)
Translates to: EQQLAMLMVLNF*LLHSRLIQHFF
Trigger: AAAGAAATGCTGGATTAGCCTTGAATGCAAGAGCAAAAAATTCAAAACCATTAACATGGCCAGCTGCTGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp ACTGCACCTGATTTCTGCTATCACAGAGGTCATTGGTaGATTCCAAACTGCTTTAGGTTTCTATCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TAPDFCYHRGHW*IPNCFRFLSLS
Trigger: AGAAAGAGATAGAAACCTAAAGCAGTTTGGAATCAACCAATGACCTCTGTGATAGCAGAAATCAGGTGCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGGCACGCATTTACTCATaGTCAATTCTTCGGGTTTAC +
Preference number: 4 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRARIYS*SILRVY
Trigger: GTAAACCCGAAGAATTGAGCATGAGTAAATGCGTGC...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGAAAGAGAAGTGTGTCTaGGTGGACTGTTTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRKEKCV*VDCFLC
Trigger: GCAAAGAAAACAGTCCACCCAGACACACTTCTCTTT...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp CAAAGTACTATCTGGATGCATTTCTCGTGGTCTGAATaGACTGCATGTGTGTGGGTTTATAGTTTGTTACAT +
Preference number: 4 (lower is better)
Translates to: QSTIWMHFSWSE*TACVWVYSLLH
Trigger: ATGTAACAAACTATAAACCCACACACATGCAGTCAATTCAGACCACGAGAAATGCATCCAGATAGTACTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp TATAAGAGCTGGGGAATAGGAAGAATTTGTGAACTGTaGTCTTCAGGACACATCATGTCCATGTATTCACAT +
Preference number: 4 (lower is better)
Translates to: YKSWGIGRICEL*SSGHIMSMYSH
Trigger: ATGTGAATACATGGACATGATGTGTCCTGAAGACAACAGTTCACAAATTCTTCCTATTCCCCAGCTCTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp AAAGATCAACAAGAAAGGAATGAGTATGTACATGTGTaGGCTTTCTCTTATGCCCCTTTCTCTTCTATCTGG +
Preference number: 4 (lower is better)
Translates to: KDQQERNEYVHV*AFSYAPFSSIW
Trigger: CCAGATAGAAGAGAAAGGGGCATAAGAGAAAGCCAACACATGTACATACTCATTCCTTTCTTGTTGATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp ATTTATTATGCAGAGGGATATCTCCTCTGTGAATACTaGAGTTGTGGTTCAAGCCCCTTTATAAAAGGACTT +
Preference number: 4 (lower is better)
Translates to: IYYAEGYLLCEY*SCGSSPFIKGL
Trigger: AAGTCCTTTTATAAAGGGGCTTGAACCACAACTCAAGTATTCACAGAGGAGATATCCCTCTGCATAATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR GCA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGATTCATCTTCAGGTATaGCTGCTCTGTTTTGAAATT +
Preference number: 4 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRIHLQV*LLCFEI
Trigger: AATTTCAAAACAGAGCAGGCATACCTGAAGATGAAT...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp ATTTGCAGAAGGCAAAGCCATGACATTAGTACAATTTaGATTGGCTACTATGTTAGTTTCTCCATATTTGGT +
Preference number: 4 (lower is better)
Translates to: ICRRQSHDISTI*IGYYVSFSIFG
Trigger: ACCAAATATGGAGAAACTAACATAGTAGCCAATCAAAATTGTACTAATGTCATGGCTTTGCCTTCTGCAAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp GAAATTAGTGCTAGATTTGTCTTGACTTTGTCCAATTaGAACAGGGAACTATTCATTCATCTTTGCAGAATC +
Preference number: 4 (lower is better)
Translates to: EISARFVLTLSN*NRELFIHLCRI
Trigger: GATTCTGCAAAGATGAATGAATAGTTCCCTGTTCAAATTGGACAAAGTCAAGACAAATCTAGCACTAATTTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
3UTR CAA 72 bp GGTGCTGATCTAGTATATTGTACAGCAGTAAGCATTTaGTTGTTGTTGTTATTGTTGTTTGCTGTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: GADLVYCTAVSI*LLLLLLFAVCL
Trigger: CAAACAAACAGCAAACAACAATAACAACAACAACAAAATGCTTACTGCTGTACAATATACTAGATCAGCACC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 90 bp AACATGACAGGGACCTGGTGGTGCAGACCCCTCCTCGGGTGGAAGTaGAGACCAAGTGTGCGGCTGCTGATCATCGGTGTCCCAGTCACA +
Preference number: 5 (lower is better)
Translates to: NMTGTWWCRPLLGWK*RPSVRLLIIGVPVT
Trigger: TGTGACTGGGACACCGATGATCAGCAGCCGCACACTTGGTCTGCACTTCCACCCGAGGAGGGGTCTGCACCACCAGGTCCCTGTCATGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022953.10
ENSMUST00000229189.2
CDS TCA 90 bp GCAGACCCCTCCTCGGGTGGAAGTGCAGACCAAGTGTGCGGCTGCTaGTCATCGGTGTCCCAGTCACATCTCTCAGCTGCTGCTCACTAT +
Preference number: 5 (lower is better)
Translates to: ADPSSGGSADQVCGC*SSVSQSHLSAAAHY
Trigger: ATAGTGAGCAGCAGCTGAGAGATGTGACTGGGACACCGATGATCAGCAGCCGCACACTTGGTCTGCACTTCCACCCGAGGAGGGGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022953.10
ENSMUST00000229189.2
CDS TCA 90 bp GTCCAGGCACTCTGCGGGCAATGGAGGCATGCTGGTGAGGTACTCTaGGTTCCGGATGTCCAGGGACAGCTGGCTGTGAGTCTGTATCAG +
Preference number: 5 (lower is better)
Translates to: VQALCGQWRHAGEVL*VPDVQGQLAVSLYQ
Trigger: CTGATACAGACTCACAGCCAGCTGTCCCTGGACATCCGGAACTCAGAGTACCTCACCAGCATGCCTCCATTGCCCGCAGAGTGCCTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 90 bp CACCATCAATGTCCAGGCACTCTGCGGGCAATGGAGGCATGCTGGTaGGGTACTCTGAGTTCCGGATGTCCAGGGACAGCTGGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: HHQCPGTLRAMEACW*GTLSSGCPGTAGCE
Trigger: CTCACAGCCAGCTGTCCCTGGACATCCGGAACTCAGAGTACCTCACCAGCATGCCTCCATTGCCCGCAGAGTGCCTGGACATTGATGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 90 bp CTCTGGCTCTTCAGCATGGTCAGGCTGGGAAGGTTTAGTGTCCAATaGTTCCCTCAGAGCAGTGCTCGGTGGGTCACAGGGCTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LWLFSMVRLGRFSVQ*FPQSSARWVTGLSR
Trigger: CCTGCTGAGCCCTGTGACCCACCGAGCACTGCTCTGAGGGAAGCATTGGACACTAAACCTTCCCAGCCTGACCATGCTGAAGAGCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 90 bp CATGTATGGCCACTGAGATCACTGACAGGTGGAAGTAGTCGAACATaGCAGGGACCTGGTGGTGCAGACCCCTCCTCGGGTGGAAGTGCA +
Preference number: 5 (lower is better)
Translates to: HVWPLRSLTGGSSRT*QGPGGADPSSGGSA
Trigger: TGCACTTCCACCCGAGGAGGGGTCTGCACCACCAGGTCCCTGTCATGTTCGACTACTTCCACCTGTCAGTGATCTCAGTGGCCATACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CCA 90 bp TCAGCAGGGGTGAGCTTCAGGCTTAGCAGGACAGGCTTTCCATCCTaGTTGACTCCCCTCCCTAGAGTCCTCAACTCAAGAGCAGCCGTT +
Preference number: 5 (lower is better)
Translates to: SAGVSFRLSRTGFPS*LTPLPRVLNSRAAV
Trigger: AACGGCTGCTCTTGAGTTGAGGACTCTAGGGAGGGGAGTCAACCAGGATGGAAAGCCTGTCCTGCTAAGCCTGAAGCTCACCCCTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 90 bp CCACCCTCCAAAGAGTTCCTGTGGTGCGCATGCCTTCGAACCACCTaGTGTAAGACGTCACGATCACTGGGTAACTCCAGGGCTCTGCTA +
Preference number: 5 (lower is better)
Translates to: PPSKEFLWCACLRTT*CKTSRSLGNSRALL
Trigger: TAGCAGAGCCCTGGAGTTACCCAGTGATCGTGACGTCTTACATCAGGTGGTTCGAAGGCATGCGCACCACAGGAACTCTTTGGAGGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 90 bp CCTGTCTTCAGCTCTTGGTTTCGTGACACTTGGGAGGCAATAGTGTaGGTCACAGTGGGGCACACGGTGCCTGCTTCATGTTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PVFSSWFRDTWEAIV*VTVGHTVPASCLAS
Trigger: GGAGGCCAAACATGAAGCAGGCACCGTGTGCCCCACTGTGACTCACACTATTGCCTCCCAAGTGTCACGAAACCAAGAGCTGAAGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 90 bp TGGAAGACACGACTGTGCACAGCACTCTCGTGGACACAGGCTGAATaGAGACTGCTGCTCTCTGACTGTCCGACGATAGAAGCACTCAGC +
Preference number: 5 (lower is better)
Translates to: WKTRLCTALSWTQAE*RLLLSDCPTIEALS
Trigger: GCTGAGTGCTTCTATCGTCGGACAGTCAGAGAGCAGCAGTCTGCATTCAGCCTGTGTCCACGAGAGTGCTGTGCACAGTCGTGTCTTCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022953.10
ENSMUST00000229189.2
CDS TCA 90 bp GTGGGACCCAGAGATGGAAGTTCCTGTCTTCAGCTCTTGGTTTCGTaGCACTTGGGAGGCAATAGTGTGAGTCACAGTGGGGCACACGGT +
Preference number: 5 (lower is better)
Translates to: VGPRDGSSCLQLLVS*HLGGNSVSHSGAHG
Trigger: ACCGTGTGCCCCACTGTGACTCACACTATTGCCTCCCAAGTGTCACGAAACCAAGAGCTGAAGACAGGAACTTCCATCTCTGGGTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 90 bp CCACCTGATGTAAGACGTCACGATCACTGGGTAACTCCAGGGCTCTaGTACGGGCCTCAGACCAGGCAACTGAGCTTGGTTCACTTTCAA +
Preference number: 5 (lower is better)
Translates to: PPDVRRHDHWVTPGL*YGPQTRQLSLVHFQ
Trigger: TTGAAAGTGAACCAAGCTCAGTTGCCTGGTCTGAGGCCCGTAGCAGAGCCCTGGAGTTACCCAGTGATCGTGACGTCTTACATCAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 90 bp CTCAGCTGCTGCTCACTATCGGTAAAGTGCAGGTCCACCTTGAGCTaGAACTCGACCTCACTCAGCGCATCTTCTACCCTCTCACCATCT +
Preference number: 5 (lower is better)
Translates to: LSCCSLSVKCRSTLS*NSTSLSASSTLSPS
Trigger: AGATGGTGAGAGGGTAGAAGATGCGCTGAGTGAGGTCGAGTTTCAGCTCAAGGTGGACCTGCACTTTACCGATAGTGAGCAGCAGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022953.10
ENSMUST00000229189.2
CDS TCA 90 bp AGGTCTGCACTGTTGCCATCCAGGCCATGGACACAGACCACCAGGTaGATCCCATCTTCCAAGTTTTCCTCCTCTTCCTCTGGTGGGAAA +
Preference number: 5 (lower is better)
Translates to: RSALLPSRPWTQTTR*IPSSKFSSSSSGGK
Trigger: TTTCCCACCAGAGGAAGAGGAGGAAAACTTGGAAGATGGGATTCACCTGGTGGTCTGTGTCCATGGCCTGGATGGCAACAGTGCAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CCA 90 bp GCACACATCGATAGGATTCCATGTGGAGACATTCTCCTGCACCTCTaGACGCCTAGTAACATCTTCATCAGAGCCCAGCTGGGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: AHIDRIPCGDILLHL*TPSNIFIRAQLGCF
Trigger: GAAGCACCCCAGCTGGGCTCTGATGAAGATGTTACTAGGCGTCCAGAGGTGCAGGAGAATGTCTCCACATGGAATCCTATCGATGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CCA 90 bp CTGGGTTTTGTTTGGAAGAGAGTCCAGCCCTGGCAGGTGTCTCCTTaGGTACAGATGAGAAAGGGAGACATGTGGCAGTGCAAGACACAG +
Preference number: 5 (lower is better)
Translates to: LGFVWKRVQPWQVSP*VQMRKGDMWQCKTQ
Trigger: CTGTGTCTTGCACTGCCACATGTCTCCCTTTCTCATCTGTACCCAAGGAGACACCTGCCAGGGCTGGACTCTCTTCCAAACAAAACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp TCCTATTCCCCAGCCAGATCCTCTTGGTGCCCATCTAGGGGGTTTCTTAACTGTATGGAGGCTGACCTCTaGATAACGCCAGAGAGCGCT +
Preference number: 5 (lower is better)
Translates to: SYSPARSSWCPSRGFLNCMEADL*ITPESA
Trigger: AGCGCTCTCTGGCGTTATCAAGAGGTCAGCCTCCAT...ACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 90 bp CAGGGTTACTGTGTCCAGGAATTGGGTCCACAGAGCCATCAGATGTaGAGCCAGCCAGGCAAGATCCTTGCTGATCTGCTCTGCTATCTT +
Preference number: 5 (lower is better)
Translates to: QGYCVQELGPQSHQM*SQPGKILADLLCYL
Trigger: AAGATAGCAGAGCAGATCAGCAAGGATCTTGCCTGGCTGGCTTCACATCTGATGGCTCTGTGGACCCAATTCCTGGACACAGTAACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 90 bp ACAGCTTCAACAGCTGGTGAACAACTGATTTCAGGCACCCTGTGGTaGGACGCAGCCCTGACTTCAGAGATGCTGTTATTGGAGAGCACG +
Preference number: 5 (lower is better)
Translates to: TASTAGEQLISGTLW*DAALTSEMLLLEST
Trigger: CGTGCTCTCCAATAACAGCATCTCTGAAGTCAGGGCTGCGTCTCACCACAGGGTGCCTGAAATCAGTTGTTCACCAGCTGTTGAAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 90 bp AGGGTCCAGATCTTCAGAAAAACCTGCTGTGTTCTTTATGGTGTCTaGACCTTCAGCAGACTCCTCAGGGCTGCTGATCTGGGGTGCAGA +
Preference number: 5 (lower is better)
Translates to: RVQIFRKTCCVLYGV*TFSRLLRAADLGCR
Trigger: TCTGCACCCCAGATCAGCAGCCCTGAGGAGTCTGCTGAAGGTGCAGACACCATAAAGAACACAGCAGGTTTTTCTGAAGATCTGGACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CCA 90 bp TTTCTGTATAAGATCTGGAAGACACGACTGTGCACAGCACTCTCGTaGACACAGGCTGAATGCAGACTGCTGCTCTCTGACTGTCCGACG +
Preference number: 5 (lower is better)
Translates to: FLYKIWKTRLCTALS*TQAECRLLLSDCPT
Trigger: CGTCGGACAGTCAGAGAGCAGCAGTCTGCATTCAGCCTGTGTCCACGAGAGTGCTGTGCACAGTCGTGTCTTCCAGATCTTATACAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022953.10
ENSMUST00000229189.2
CDS CCA 90 bp TTGGCTTGCAGTATCCAGCTCCAAAGACCAAGTTTTCCAGAGAAATaGTGGGCTGTTCTGGTCCTGTGTCTGGGCCACCTTTGCCTAACC +
Preference number: 5 (lower is better)
Translates to: LACSIQLQRPSFPEK*WAVLVLCLGHLCLT
Trigger: GGTTAGGCAAAGGTGGCCCAGACACAGGACCAGAACAGCCCACCATTTCTCTGGAAAACTTGGTCTTTGGAGCTGGATACTGCAAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 90 bp TTTGGAAGAGAGTCCAGCCCTGGCAGGTGTCTCCTTGGGTACAGATaGGAAAGGGAGACATGTGGCAGTGCAAGACACAGACAAGTTAAC +
Preference number: 5 (lower is better)
Translates to: FGRESSPGRCLLGYR*ERETCGSARHRQVN
Trigger: GTTAACTTGTCTGTGTCTTGCACTGCCACATGTCTCCCTTTCTCATCTGTACCCAAGGAGACACCTGCCAGGGCTGGACTCTCTTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 90 bp GGAGCAGTAGACAGAGATCCCGGTGCCACTTGTGTGCATGTTGTATaGAGTTCTCTGAGGGAACATAGAAGCTTCCCTCTGAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: GAVDRDPGATCVHVV*SSLREHRSFPLRKL
Trigger: CAACTTCCTCAGAGGGAAGCTTCTATGTTCCCTCAGAGAACTGCATACAACATGCACACAAGTGGCACCGGGATCTCTGTCTACTGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 90 bp GATTCTGAGCACACATCGATAGGATTCCATGTGGAGACATTCTCCTaGACCTCTGGACGCCTAGTAACATCTTCATCAGAGCCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: DSEHTSIGFHVETFS*TSGRLVTSSSEPSW
Trigger: CCAGCTGGGCTCTGATGAAGATGTTACTAGGCGTCCAGAGGTGCAGGAGAATGTCTCCACATGGAATCCTATCGATGTGTGCTCAGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CCA 90 bp ACTGCCTTCAGGCTATCCAGAGTAAAGGCCTCTGTGGAGTTCAAGTaGGACCCAGAGATGGAAGTTCCTGTCTTCAGCTCTTGGTTTCGT +
Preference number: 5 (lower is better)
Translates to: TAFRLSRVKASVEFK*DPEMEVPVFSSWFR
Trigger: ACGAAACCAAGAGCTGAAGACAGGAACTTCCATCTCTGGGTCCCACTTGAACTCCACAGAGGCCTTTACTCTGGATAGCCTGAAGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 90 bp TCCACAGAGCCATCAGATGTGAAGCCAGCCAGGCAAGATCCTTGCTaGTCTGCTCTGCTATCTTCTCTGGGTTGTTCAGCATCTGTAACT +
Preference number: 5 (lower is better)
Translates to: STEPSDVKPARQDPC*SALLSSLGCSASVT
Trigger: AGTTACAGATGCTGAACAACCCAGAGAAGATAGCAGAGCAGATCAGCAAGGATCTTGCCTGGCTGGCTTCACATCTGATGGCTCTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 90 bp AAGAAAAACTTCTCAAGGAAGAGTTCCGAGTCCAGCACGGCTATATaGGCTGCACGTCCAATCAGGGTGTTGGCAGTGTTGGGTAGAGCA +
Preference number: 5 (lower is better)
Translates to: KKNFSRKSSESSTAI*AARPIRVLAVLGRA
Trigger: TGCTCTACCCAACACTGCCAACACCCTGATTGGACGTGCAGCTCATATAGCCGTGCTGGACTCGGAACTCTTCCTTGAGAAGTTTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 90 bp AGAGCCATCAGATGTGAAGCCAGCCAGGCAAGATCCTTGCTGATCTaGTCTGCTATCTTCTCTGGGTTGTTCAGCATCTGTAACTCTGAG +
Preference number: 5 (lower is better)
Translates to: RAIRCEASQARSLLI*SAIFSGLFSICNSE
Trigger: CTCAGAGTTACAGATGCTGAACAACCCAGAGAAGATAGCAGAGCAGATCAGCAAGGATCTTGCCTGGCTGGCTTCACATCTGATGGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGCGGAGGTCTGCACTGTaGCCATCCAGGCCATGGACA +
Preference number: 5 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVRRSAL*PSRPWT
Trigger: TGTCCATGGCCTGGATGGCAACAGTGCAGACCTCCG...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 90 bp ATGGAAACTTCTTCGTTTCTGTATAAGATCTGGAAGACACGACTGTaGACAGCACTCTCGTGGACACAGGCTGAATGCAGACTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: METSSFLYKIWKTRL*TALSWTQAECRLLL
Trigger: GAGCAGCAGTCTGCATTCAGCCTGTGTCCACGAGAGTGCTGTGCACAGTCGTGTCTTCCAGATCTTATACAGAAACGAAGAAGTTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022953.10
ENSMUST00000229189.2
CDS GCA 90 bp AGCATCAGGCCTAGGGCCAGTCCAGCATTCATCTTCAGGTATGCCTaGTCTGTTTTGAAATTCACCAATGGTCAGGTACACCTGAGATTC +
Preference number: 5 (lower is better)
Translates to: SIRPRASPAFIFRYA*SVLKFTNGQVHLRF
Trigger: GAATCTCAGGTGTACCTGACCATTGGTGAATTTCAAAACAGAGCAGGCATACCTGAAGATGAATGCTGGACTGGCCCTAGGCCTGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CCA 90 bp TCCTGCACCTCTGGACGCCTAGTAACATCTTCATCAGAGCCCAGCTaGGGTGCTTCTGTAGTAGATAAGGGAATGTCCTTTCTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: SCTSGRLVTSSSEPS*GASVVDKGMSFLED
Trigger: ATCTTCAAGAAAGGACATTCCCTTATCTACTACAGAAGCACCCCAGCTGGGCTCTGATGAAGATGTTACTAGGCGTCCAGAGGTGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CCA 90 bp AGGGCAGTACTTATTGCTAGATTGCACATCAATATAGGTCAGTGCTaGGGTCTGCCCTTCATCAGGGCCTGGACTTCTGCTACATATGTC +
Preference number: 5 (lower is better)
Translates to: RAVLIARLHINIGQC*GLPFIRAWTSATYV
Trigger: GACATATGTAGCAGAAGTCCAGGCCCTGATGAAGGGCAGACCCCAGCACTGACCTATATTGATGTGCAATCTAGCAATAAGTACTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTTTCCCTCTGAGGAAGTaGGCTTGCAGTATCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPFPLRK*ACSIQL
Trigger: GAGCTGGATACTGCAAGCCAACTTCCTCAGAGGGAA...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp TCCTATTCCCCAGCCAGATCCTCTTGGTGCCCATCTAGGGGGTTTCTTAACTGTGATCTGATGATAATGTaGCCAAGAGAATGGCCGATG +
Preference number: 5 (lower is better)
Translates to: SYSPARSSWCPSRGFLNCDLMIM*PREWPM
Trigger: CATCGGCCATTCTCTTGGCAACATTATCATCAGATC...ACAGTTAAGAAACCCCCTAGATGGGCACCAAGAGGATCTGGCTGGGGAATAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp TTTGCTCTTGCATTCAAGGCTAATCCAGCATTTCTTTGGAAGTGCATCAGCAGGTGGCACATAGCGGTCTaGGGGAGAAGCAACCAGAAC +
Preference number: 5 (lower is better)
Translates to: FALAFKANPAFLWKCISRWHIAV*GRSNQN
Trigger: GTTCTGGTTGCTTCTCCCCAAGACCGCTATGTGCCA...CCTGCTGATGCACTTCCAAAGAAATGCTGGATTAGCCTTGAATGCAAGAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp TTTGCTCTTGCATTCAAGGCTAATCCAGCATTTCTTTGGAAGTGCATCAGCAGGATCAAAGTGCAGTCCTaGGCTTCTACCAGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: FALAFKANPAFLWKCISRIKVQS*ASTRGP
Trigger: GGGCCCTCTGGTAGAAGCCAAGGACTGCACTTTGAT...CCTGCTGATGCACTTCCAAAGAAATGCTGGATTAGCCTTGAATGCAAGAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp TTTGCTCTTGCATTCAAGGCTAATCCAGCATTTCTTTGGAAGTGCATCAGCAGGCGTCCAATCAGGGTGTaGGCAGTGTTGGGTAGAGCA +
Preference number: 5 (lower is better)
Translates to: FALAFKANPAFLWKCISRRPIRV*AVLGRA
Trigger: TGCTCTACCCAACACTGCCAACACCCTGATTGGACG...CCTGCTGATGCACTTCCAAAGAAATGCTGGATTAGCCTTGAATGCAAGAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 90 bp AGTTCTCTGAGGGAACATAGAAGCTTCCCTCTGAGGAAGTTGGCTTaGAGTATCCAGCTCCAAAGACCAAGTTTTCCAGAGAAATGGTGG +
Preference number: 5 (lower is better)
Translates to: SSLREHRSFPLRKLA*SIQLQRPSFPEKWW
Trigger: CCACCATTTCTCTGGAAAACTTGGTCTTTGGAGCTGGATACTGCAAGCCAACTTCCTCAGAGGGAAGCTTCTATGTTCCCTCAGAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 90 bp TCTAGGGCAGTACTTATTGCTAGATTGCACATCAATATAGGTCAGTaGTGGGGTCTGCCCTTCATCAGGGCCTGGACTTCTGCTACATAT +
Preference number: 5 (lower is better)
Translates to: SRAVLIARLHINIGQ*WGLPFIRAWTSATY
Trigger: ATATGTAGCAGAAGTCCAGGCCCTGATGAAGGGCAGACCCCAGCACTGACCTATATTGATGTGCAATCTAGCAATAAGTACTGCCCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CCA 90 bp ATCCTGGACCCTAGACCCACCATACGAAAGAGAAGTGTGTCTGGGTaGACTGTTTTCTTTGCTAGAAGGGTCCAGATCTTCAGAAAAACC +
Preference number: 5 (lower is better)
Translates to: ILDPRPTIRKRSVSG*TVFFARRVQIFRKT
Trigger: GGTTTTTCTGAAGATCTGGACCCTTCTAGCAAAGAAAACAGTCCACCCAGACACACTTCTCTTTCGTATGGTGGGTCTAGGGTCCAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp CTCAGAGCTCCAAAATCTCTTCACCCAGCTCACAAAGCTCCTATGGAGGGTCACTGGAATTATTCTGGCTaGTTCCTGCTACAACTTTGC +
Preference number: 5 (lower is better)
Translates to: LRAPKSLHPAHKAPMEGHWNYSG*FLLQLC
Trigger: GCAAAGTTGTAGCAGGAACAAGCCAGAATAATTCCA...GTGACCCTCCATAGGAGCTTTGTGAGCTGGGTGAAGAGATTTTGGAGCTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTACCAGGCAACTGAGCTaGGTTCACTTTCAATGCCTG +
Preference number: 5 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPTRQLS*VHFQCL
Trigger: CAGGCATTGAAAGTGAACCAAGCTCAGTTGCCTGGT...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CCA 90 bp AGCATGGCGTCATTTATGGAAACTTCTTCGTTTCTGTATAAGATCTaGAAGACACGACTGTGCACAGCACTCTCGTGGACACAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: SMASFMETSSFLYKI*KTRLCTALSWTQAE
Trigger: TTCAGCCTGTGTCCACGAGAGTGCTGTGCACAGTCGTGTCTTCCAGATCTTATACAGAAACGAAGAAGTTTCCATAAATGACGCCATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022953.10
ENSMUST00000229189.2
CDS-3UTR CAA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGGCCTGTGGGGGATCCTaGAAGACACTTTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVACGGS*KTLSRS
Trigger: TGACCTTGAAAGTGTCTTCAAGGATCCCCCACAGGC...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCAGTGTCTGGGCCACCTTaGCCTAACCAGGAACCTCTT +
Preference number: 5 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSVSGPP*PNQEPL
Trigger: AAGAGGTTCCTGGTTAGGCAAAGGTGGCCCAGACAC...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp CAAGATGGAAGCCTTTTCAGTACTTGGTCATCAGCACAGCTCTTGGGTAGATGGGCTATCTTCTCTGGGTaGTTCAGCATCTGTAACTCT +
Preference number: 5 (lower is better)
Translates to: QDGSLFSTWSSAQLLGRWAIFSG*FSICNS
Trigger: AGAGTTACAGATGCTGAACAACCCAGAGAAGATAGC...CCATCTACCCAAGAGCTGTGCTGATGACCAAGTACTGAAAAGGCTTCCATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTGGTGGACTGTTTTCTTaGCTAGAAGGGTCCAGATCT +
Preference number: 5 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPGGLFS*LEGSRS
Trigger: AGATCTGGACCCTTCTAGCAAAGAAAACAGTCCACC...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCAGGAGCTGGGTTTTGTTaGGAAGAGAGTCCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSGAGFC*EESPAL
Trigger: CAGGGCTGGACTCTCTTCCAAACAAAACCCAGCTCC...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 90 bp TGCTCTGTTTTGAAATTCACCAATGGTCAGGTACACCTGAGATTCTaGGCACACATCGATAGGATTCCATGTGGAGACATTCTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: CSVLKFTNGQVHLRF*AHIDRIPCGDILLH
Trigger: GTGCAGGAGAATGTCTCCACATGGAATCCTATCGATGTGTGCTCAGAATCTCAGGTGTACCTGACCATTGGTGAATTTCAAAACAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGTCTGAGGAAGTTGGCTaGCAGTATCCAGCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVSEEVG*QYPAPK
Trigger: CTTTGGAGCTGGATACTGCAAGCCAACTTCCTCAGA...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGGAGATAAGTGGTGACTaGGGAGTGCAGGGTTACTGT +
Preference number: 5 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVEISGD*GVQGYC
Trigger: ACAGTAACCCTGCACTCCCAAGTCACCACTTATCTC...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTGTTCCTGCTACAACTTaGCTTGGCACAGTCTTAACA +
Preference number: 5 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPVPATT*LGTVLT
Trigger: TGTTAAGACTGTGCCAAGCAAAGTTGTAGCAGGAAC...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp TTTGCTCTTGCATTCAAGGCTAATCCAGCATTTCTTTGGAAGTGCATCAGCAGGGGGCCCAAGAGGTTGTaGATCATTTCTGCATACACT +
Preference number: 5 (lower is better)
Translates to: FALAFKANPAFLWKCISRGPKRL*IISAYT
Trigger: AGTGTATGCAGAAATGATCAACAACCTCTTGGGCCC...CCTGCTGATGCACTTCCAAAGAAATGCTGGATTAGCCTTGAATGCAAGAGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp GAACTGTTGTCTTCAGGACACATCATGTCCATGTATTCACATCAATTATGGTCATACTGTGTCCAGGAATaGGGTCCACAGAGCCATCAG +
Preference number: 5 (lower is better)
Translates to: ELLSSGHIMSMYSHQLWSYCVQE*GPQSHQ
Trigger: CTGATGGCTCTGTGGACCCAATTCCTGGACACAGTA...TGACCATAATTGATGTGAATACATGGACATGATGTGTCCTGAAGACAACAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCACAGACAACAGGGTTCTaGAAGTTCAGGGTGATTCCC +
Preference number: 5 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSQTTGF*KFRVIP
Trigger: GGGAATCACCCTGAACTTCAAGAACCCTGTTGTCTG...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGCCTGTAGAATTCAGGTaGACAGCTTCAACAGCTGGT +
Preference number: 5 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVPVEFR*TASTAG
Trigger: ACCAGCTGTTGAAGCTGTCAACCTGAATTCTACAGG...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp CAATTACAAAGAAGACTGCATGAAGAACAGGAGAAAACATGCGGAGTGTGTGTGAATAGGAGCTGGGTTTaGTTTGGAAGAGAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: QLQRRLHEEQEKTCGVCVNRSWV*FGRESS
Trigger: GCTGGACTCTCTTCCAAACAAAACCCAGCTCCTATT...CACACACACTCCGCATGTTTTCTCCTGTTCTTCATGCAGTCTTCTTTGTAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp GAACTGTTGTCTTCAGGACACATCATGTCCATGTATTCACATCAATTATGGTCACTAACCAGGGTGCTATaGTTGTACAGAGTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: ELLSSGHIMSMYSHQLWSLTRVL*LYRVPR
Trigger: CCTGGGGACTCTGTACAACAATAGCACCCTGGTTAG...TGACCATAATTGATGTGAATACATGGACATGATGTGTCCTGAAGACAACAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp TTTGCTCTTGCATTCAAGGCTAATCCAGCATTTCTTTGGAAGTGCATCAGCAGGCTGCAGCCCTGTTTTTaGGCTAAGTTGGTAAAGGAA +
Preference number: 5 (lower is better)
Translates to: FALAFKANPAFLWKCISRLQPCF*AKLVKE
Trigger: TTCCTTTACCAACTTAGCCAAAAAACAGGGCTGCAG...CCTGCTGATGCACTTCCAAAGAAATGCTGGATTAGCCTTGAATGCAAGAGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCACCTGTGTGTCTGTCCTaGAGGGCGGTTTTACACATT +
Preference number: 5 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSPVCLS*RAVLHI
Trigger: AATGTGTAAAACCGCCCTCAAGGACAGACACACAGG...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp CCTCCTTCTGCTAGGGAGAGTTTCTCTCAGTCTTCTCTATTTCAGAGAGGAATTTATGCCTGCTCTGTTTaGAAATTCACCAATGGTCAG +
Preference number: 5 (lower is better)
Translates to: PPSARESFSQSSLFQRGIYACSV*KFTNGQ
Trigger: CTGACCATTGGTGAATTTCAAAACAGAGCAGGCATA...AATTCCTCTCTGAAATAGAGAAGACTGAGAGAAACTCTCCCTAGCAGAAGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp CCTCCTTCTGCTAGGGAGAGTTTCTCTCAGTCTTCTCTATTTCAGAGAGGAATTCTTTTAGATTCATTATaGCAGGACTTGTCACTGGGA +
Preference number: 5 (lower is better)
Translates to: PPSARESFSQSSLFQRGILLDSL*QDLSLG
Trigger: TCCCAGTGACAAGTCCTGCAATAATGAATCTAAAAG...AATTCCTCTCTGAAATAGAGAAGACTGAGAGAAACTCTCCCTAGCAGAAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp CTTGGAGTCTCTGGAGCATTCAAAGGCTATATATTGCAGCCACCTATCATGCCTGTACTTATTGCTAGATaGCACATCAATATAGGTCAG +
Preference number: 5 (lower is better)
Translates to: LGVSGAFKGYILQPPIMPVLIAR*HINIGQ
Trigger: CTGACCTATATTGATGTGCAATCTAGCAATAAGTAC...AGGCATGATAGGTGGCTGCAATATATAGCCTTTGAATGCTCCAGAGACTCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp CCTCCTTCTGCTAGGGAGAGTTTCTCTCAGTCTTCTCTATTTCAGAGAGGAATTTTTAAGTTAAGACCTTaGGTTTCAACATGTAGTGGG +
Preference number: 5 (lower is better)
Translates to: PPSARESFSQSSLFQRGIFKLRP*VSTCSG
Trigger: CCCACTACATGTTGAAACCAAAGGTCTTAACTTAAA...AATTCCTCTCTGAAATAGAGAAGACTGAGAGAAACTCTCCCTAGCAGAAGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp CATCCCATAAAACTATCTGTATCCTCTCCATATTCTATTCCAAGCAAGGGGTCAGTACAACTGGATGTGTaGAATAATCTCATCCAACAA +
Preference number: 5 (lower is better)
Translates to: HPIKLSVSSPYSIPSKGSVQLDV*NNLIQQ
Trigger: TTGTTGGATGAGATTATTCAACACATCCAGTTGTAC...TGACCCCTTGCTTGGAATAGAATATGGAGAGGATACAGATAGTTTTATGGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS-3UTR CAA 90 bp ATTAAAATGTACTCACAGGCTTCCTTAGAAATGTGCTTTACTCATCTCACAAGGCTAGGGCAGTACTTATaGCTAGATTGCACATCAATA +
Preference number: 5 (lower is better)
Translates to: IKMYSQASLEMCFTHLTRLGQYL*LDCTSI
Trigger: TATTGATGTGCAATCTAGCAATAAGTACTGCCCTAG...CCTTGTGAGATGAGTAAAGCACATTTCTAAGGAAGCCTGTGAGTACATTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 72 bp GGGACCTGGTGGTGCAGACCCCTCCTCGGGTGGAAGTaGAGACCAAGTGTGCGGCTGCTGATCATCGGTGTC +
Preference number: 6 (lower is better)
Translates to: GTWWCRPLLGWK*RPSVRLLIIGV
Trigger: GACACCGATGATCAGCAGCCGCACACTTGGTCTGCACTTCCACCCGAGGAGGGGTCTGCACCACCAGGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022953.10
ENSMUST00000229189.2
CDS CCA 72 bp ATGACAGGGACCTGGTGGTGCAGACCCCTCCTCGGGTaGAAGTGCAGACCAAGTGTGCGGCTGCTGATCATC +
Preference number: 6 (lower is better)
Translates to: MTGTWWCRPLLG*KCRPSVRLLII
Trigger: GATGATCAGCAGCCGCACACTTGGTCTGCACTTCCACCCGAGGAGGGGTCTGCACCACCAGGTCCCTGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022953.10
ENSMUST00000229189.2
CDS TCA 72 bp CTCTGCGGGCAATGGAGGCATGCTGGTGAGGTACTCTaGGTTCCGGATGTCCAGGGACAGCTGGCTGTGAGT +
Preference number: 6 (lower is better)
Translates to: LCGQWRHAGEVL*VPDVQGQLAVS
Trigger: ACTCACAGCCAGCTGTCCCTGGACATCCGGAACTCAGAGTACCTCACCAGCATGCCTCCATTGCCCGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 72 bp TGTCCAGGCACTCTGCGGGCAATGGAGGCATGCTGGTaGGGTACTCTGAGTTCCGGATGTCCAGGGACAGCT +
Preference number: 6 (lower is better)
Translates to: CPGTLRAMEACW*GTLSSGCPGTA
Trigger: AGCTGTCCCTGGACATCCGGAACTCAGAGTACCTCACCAGCATGCCTCCATTGCCCGCAGAGTGCCTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 72 bp TCCTCGGGTGGAAGTGCAGACCAAGTGTGCGGCTGCTaGTCATCGGTGTCCCAGTCACATCTCTCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: SSGGSADQVCGC*SSVSQSHLSAA
Trigger: AGCAGCTGAGAGATGTGACTGGGACACCGATGATCAGCAGCCGCACACTTGGTCTGCACTTCCACCCGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022953.10
ENSMUST00000229189.2
CDS TCA 72 bp CCACTGAGATCACTGACAGGTGGAAGTAGTCGAACATaGCAGGGACCTGGTGGTGCAGACCCCTCCTCGGGT +
Preference number: 6 (lower is better)
Translates to: PLRSLTGGSSRT*QGPGGADPSSG
Trigger: ACCCGAGGAGGGGTCTGCACCACCAGGTCCCTGTCATGTTCGACTACTTCCACCTGTCAGTGATCTCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CCA 72 bp TTTAGTGTCCAATGCTTCCCTCAGAGCAGTGCTCGGTaGGTCACAGGGCTCAGCAGGGGTGAGCTTCAGGCT +
Preference number: 6 (lower is better)
Translates to: FSVQCFPQSSAR*VTGLSRGELQA
Trigger: AGCCTGAAGCTCACCCCTGCTGAGCCCTGTGACCCACCGAGCACTGCTCTGAGGGAAGCATTGGACACTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 72 bp GTAAGACGTCACGATCACTGGGTAACTCCAGGGCTCTaGTACGGGCCTCAGACCAGGCAACTGAGCTTGGTT +
Preference number: 6 (lower is better)
Translates to: VRRHDHWVTPGL*YGPQTRQLSLV
Trigger: AACCAAGCTCAGTTGCCTGGTCTGAGGCCCGTAGCAGAGCCCTGGAGTTACCCAGTGATCGTGACGTCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CAA 72 bp ATGGTGGGCTGTTCTGGTCCTGTGTCTGGGCCACCTTaGCCTAACCAGGAACCTCTTCCTGGGCGAGTGAAA +
Preference number: 6 (lower is better)
Translates to: MVGCSGPVSGPP*PNQEPLPGRVK
Trigger: TTTCACTCGCCCAGGAAGAGGTTCCTGGTTAGGCAAAGGTGGCCCAGACACAGGACCAGAACAGCCCACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CAA 90 bp TCCAGAGAAATGGTGGGCTGTTCTGGTCCTGTGTCTGGGCCACCTTaGCCTAACCAGGAACCTCTTCCTGGGCGAGTGAAACTGATCAGG +
Preference number: 6 (lower is better)
Translates to: SREMVGCSGPVSGPP*PNQEPLPGRVKLIR
Trigger: CCTGATCAGTTTCACTCGCCCAGGAAGAGGTTCCTGGTTAGGCAAAGGTGGCCCAGACACAGGACCAGAACAGCCCACCATTTCTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 72 bp GCTTCAGGCTTAGCAGGACAGGCTTTCCATCCTGGTTaGCTCCCCTCCCTAGAGTCCTCAACTCAAGAGCAG +
Preference number: 6 (lower is better)
Translates to: ASGLAGQAFHPG*LPSLESSTQEQ
Trigger: CTGCTCTTGAGTTGAGGACTCTAGGGAGGGGAGTCAACCAGGATGGAAAGCCTGTCCTGCTAAGCCTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 72 bp GAGTCCAGCCCTGGCAGGTGTCTCCTTGGGTACAGATaGGAAAGGGAGACATGTGGCAGTGCAAGACACAGA +
Preference number: 6 (lower is better)
Translates to: ESSPGRCLLGYR*ERETCGSARHR
Trigger: TCTGTGTCTTGCACTGCCACATGTCTCCCTTTCTCATCTGTACCCAAGGAGACACCTGCCAGGGCTGGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 72 bp CGACTGTGCACAGCACTCTCGTGGACACAGGCTGAATaGAGACTGCTGCTCTCTGACTGTCCGACGATAGAA +
Preference number: 6 (lower is better)
Translates to: RLCTALSWTQAE*RLLLSDCPTIE
Trigger: TTCTATCGTCGGACAGTCAGAGAGCAGCAGTCTGCATTCAGCCTGTGTCCACGAGAGTGCTGTGCACAGTCG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022953.10
ENSMUST00000229189.2
CDS CCA 72 bp GTTTGGAAGAGAGTCCAGCCCTGGCAGGTGTCTCCTTaGGTACAGATGAGAAAGGGAGACATGTGGCAGTGC +
Preference number: 6 (lower is better)
Translates to: VWKRVQPWQVSP*VQMRKGDMWQC
Trigger: GCACTGCCACATGTCTCCCTTTCTCATCTGTACCCAAGGAGACACCTGCCAGGGCTGGACTCTCTTCCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CAA 72 bp TCCTCAGGGCTGCTGATCTGGGGTGCAGACACAGACTaGGTTAGCTTGTTAAGTGCCAGCTCACGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: SSGLLIWGADTD*VSLLSASSRSS
Trigger: GGAAGAGCGTGAGCTGGCACTTAACAAGCTAACCAAGTCTGTGTCTGCACCCCAGATCAGCAGCCCTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CAA 90 bp TCGGACCCTCAAAGTGTGATGCTCCTGGGTGAGATAAGTGGTGACTaGGGAGTGCAGGGTTACTGTGTCCAGGAATTGGGTCCACAGAGC +
Preference number: 6 (lower is better)
Translates to: SDPQSVMLLGEISGD*GVQGYCVQELGPQS
Trigger: GCTCTGTGGACCCAATTCCTGGACACAGTAACCCTGCACTCCCAAGTCACCACTTATCTCACCCAGGAGCATCACACTTTGAGGGTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 72 bp TGTGTCCAGGAATTGGGTCCACAGAGCCATCAGATGTaGAGCCAGCCAGGCAAGATCCTTGCTGATCTGCTC +
Preference number: 6 (lower is better)
Translates to: CVQELGPQSHQM*SQPGKILADLL
Trigger: GAGCAGATCAGCAAGGATCTTGCCTGGCTGGCTTCACATCTGATGGCTCTGTGGACCCAATTCCTGGACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 72 bp AGCTCTTGGTTTCGTGACACTTGGGAGGCAATAGTGTaGGTCACAGTGGGGCACACGGTGCCTGCTTCATGT +
Preference number: 6 (lower is better)
Translates to: SSWFRDTWEAIV*VTVGHTVPASC
Trigger: ACATGAAGCAGGCACCGTGTGCCCCACTGTGACTCACACTATTGCCTCCCAAGTGTCACGAAACCAAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 72 bp CTGCTGATCATCGGTGTCCCAGTCACATCTCTCAGCTaGTGCTCACTATCGGTAAAGTGCAGGTCCACCTTG +
Preference number: 6 (lower is better)
Translates to: LLIIGVPVTSLS*CSLSVKCRSTL
Trigger: CAAGGTGGACCTGCACTTTACCGATAGTGAGCAGCAGCTGAGAGATGTGACTGGGACACCGATGATCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022953.10
ENSMUST00000229189.2
CDS GCA 72 bp GGCAATAGTGTGAGTCACAGTGGGGCACACGGTGCCTaGTTCATGTTTGGCCTCCAGAGAGGCATTATGTCT +
Preference number: 6 (lower is better)
Translates to: GNSVSHSGAHGA*FMFGLQRGIMS
Trigger: AGACATAATGCCTCTCTGGAGGCCAAACATGAAGCAGGCACCGTGTGCCCCACTGTGACTCACACTATTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CCA 72 bp CTCTCTGACTGTCCGACGATAGAAGCACTCAGCCTGTaGGGGATCCTTGAAGACACTTTCAAGGTCACTCGG +
Preference number: 6 (lower is better)
Translates to: LSDCPTIEALSL*GILEDTFKVTR
Trigger: CCGAGTGACCTTGAAAGTGTCTTCAAGGATCCCCCACAGGCTGAGTGCTTCTATCGTCGGACAGTCAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022953.10
ENSMUST00000229189.2
CDS CCA 72 bp AAGATCTGGAAGACACGACTGTGCACAGCACTCTCGTaGACACAGGCTGAATGCAGACTGCTGCTCTCTGAC +
Preference number: 6 (lower is better)
Translates to: KIWKTRLCTALS*TQAECRLLLSD
Trigger: GTCAGAGAGCAGCAGTCTGCATTCAGCCTGTGTCCACGAGAGTGCTGTGCACAGTCGTGTCTTCCAGATCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022953.10
ENSMUST00000229189.2
CDS CAA 90 bp GCTGGGTTTTGTTTGGAAGAGAGTCCAGCCCTGGCAGGTGTCTCCTaGGGTACAGATGAGAAAGGGAGACATGTGGCAGTGCAAGACACA +
Preference number: 6 (lower is better)
Translates to: AGFCLEESPALAGVS*GTDEKGRHVAVQDT
Trigger: TGTGTCTTGCACTGCCACATGTCTCCCTTTCTCATCTGTACCCAAGGAGACACCTGCCAGGGCTGGACTCTCTTCCAAACAAAACCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 72 bp TGCTCACTATCGGTAAAGTGCAGGTCCACCTTGAGCTaGAACTCGACCTCACTCAGCGCATCTTCTACCCTC +
Preference number: 6 (lower is better)
Translates to: CSLSVKCRSTLS*NSTSLSASSTL
Trigger: GAGGGTAGAAGATGCGCTGAGTGAGGTCGAGTTTCAGCTCAAGGTGGACCTGCACTTTACCGATAGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022953.10
ENSMUST00000229189.2
CDS TCA 72 bp AAAGAGTTCCTGTGGTGCGCATGCCTTCGAACCACCTaGTGTAAGACGTCACGATCACTGGGTAACTCCAGG +
Preference number: 6 (lower is better)
Translates to: KEFLWCACLRTT*CKTSRSLGNSR
Trigger: CCTGGAGTTACCCAGTGATCGTGACGTCTTACATCAGGTGGTTCGAAGGCATGCGCACCACAGGAACTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 72 bp TTCTCAAGGAAGAGTTCCGAGTCCAGCACGGCTATATaGGCTGCACGTCCAATCAGGGTGTTGGCAGTGTTG +
Preference number: 6 (lower is better)
Translates to: FSRKSSESSTAI*AARPIRVLAVL
Trigger: CAACACTGCCAACACCCTGATTGGACGTGCAGCTCATATAGCCGTGCTGGACTCGGAACTCTTCCTTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CAA 90 bp GTAACTCCAGGGCTCTGCTACGGGCCTCAGACCAGGCAACTGAGCTaGGTTCACTTTCAATGCCTGAATCAGATATTATGGAGGCTGACC +
Preference number: 6 (lower is better)
Translates to: VTPGLCYGPQTRQLS*VHFQCLNQILWRLT
Trigger: GGTCAGCCTCCATAATATCTGATTCAGGCATTGAAAGTGAACCAAGCTCAGTTGCCTGGTCTGAGGCCCGTAGCAGAGCCCTGGAGTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CAA 90 bp TCCTCAGGGCTGCTGATCTGGGGTGCAGACACAGACTTGGTTAGCTaGTTAAGTGCCAGCTCACGCTCTTCCTCTTCAAAAGGCAATGAG +
Preference number: 6 (lower is better)
Translates to: SSGLLIWGADTDLVS*LSASSRSSSSKGNE
Trigger: CTCATTGCCTTTTGAAGAGGAAGAGCGTGAGCTGGCACTTAACAAGCTAACCAAGTCTGTGTCTGCACCCCAGATCAGCAGCCCTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CAA 90 bp TCAGCAGACTCCTCAGGGCTGCTGATCTGGGGTGCAGACACAGACTaGGTTAGCTTGTTAAGTGCCAGCTCACGCTCTTCCTCTTCAAAA +
Preference number: 6 (lower is better)
Translates to: SADSSGLLIWGADTD*VSLLSASSRSSSSK
Trigger: TTTTGAAGAGGAAGAGCGTGAGCTGGCACTTAACAAGCTAACCAAGTCTGTGTCTGCACCCCAGATCAGCAGCCCTGAGGAGTCTGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CAA 90 bp ATCAAAGTGCAGTCCTTGGCTTCTACCAGAGGGCCCAAGAGGTTGTaGATCATTTCTGCATACACTGGCCCTGTGTGTCTGTCCTTGAGG +
Preference number: 6 (lower is better)
Translates to: IKVQSLASTRGPKRL*IISAYTGPVCLSLR
Trigger: CCTCAAGGACAGACACACAGGGCCAGTGTATGCAGAAATGATCAACAACCTCTTGGGCCCTCTGGTAGAAGCCAAGGACTGCACTTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CAA 90 bp CTGATCAAAGTGCAGTCCTTGGCTTCTACCAGAGGGCCCAAGAGGTaGTTGATCATTTCTGCATACACTGGCCCTGTGTGTCTGTCCTTG +
Preference number: 6 (lower is better)
Translates to: LIKVQSLASTRGPKR*LIISAYTGPVCLSL
Trigger: CAAGGACAGACACACAGGGCCAGTGTATGCAGAAATGATCAACAACCTCTTGGGCCCTCTGGTAGAAGCCAAGGACTGCACTTTGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 72 bp TCCGACGATAGAAGCACTCAGCCTGTGGGGGATCCTTaGAGACACTTTCAAGGTCACTCGGATCTGGTAGTA +
Preference number: 6 (lower is better)
Translates to: SDDRSTQPVGDP*RHFQGHSDLVV
Trigger: TACTACCAGATCCGAGTGACCTTGAAAGTGTCTTCAAGGATCCCCCACAGGCTGAGTGCTTCTATCGTCGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022953.10
ENSMUST00000229189.2
CDS TCA 72 bp CCATCAGATGTGAAGCCAGCCAGGCAAGATCCTTGCTaGTCTGCTCTGCTATCTTCTCTGGGTTGTTCAGCA +
Preference number: 6 (lower is better)
Translates to: PSDVKPARQDPC*SALLSSLGCSA
Trigger: TGCTGAACAACCCAGAGAAGATAGCAGAGCAGATCAGCAAGGATCTTGCCTGGCTGGCTTCACATCTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 72 bp ACAGCTGGTGAACAACTGATTTCAGGCACCCTGTGGTaGGACGCAGCCCTGACTTCAGAGATGCTGTTATTG +
Preference number: 6 (lower is better)
Translates to: TAGEQLISGTLW*DAALTSEMLLL
Trigger: CAATAACAGCATCTCTGAAGTCAGGGCTGCGTCTCACCACAGGGTGCCTGAAATCAGTTGTTCACCAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CCA 72 bp GATAGGATTCCATGTGGAGACATTCTCCTGCACCTCTaGACGCCTAGTAACATCTTCATCAGAGCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: DRIPCGDILLHL*TPSNIFIRAQL
Trigger: CAGCTGGGCTCTGATGAAGATGTTACTAGGCGTCCAGAGGTGCAGGAGAATGTCTCCACATGGAATCCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CCA 72 bp AGGCTATCCAGAGTAAAGGCCTCTGTGGAGTTCAAGTaGGACCCAGAGATGGAAGTTCCTGTCTTCAGCTCT +
Preference number: 6 (lower is better)
Translates to: RLSRVKASVEFK*DPEMEVPVFSS
Trigger: AGAGCTGAAGACAGGAACTTCCATCTCTGGGTCCCACTTGAACTCCACAGAGGCCTTTACTCTGGATAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CCA 72 bp GCACGGCTATATGAGCTGCACGTCCAATCAGGGTGTTaGCAGTGTTGGGTAGAGCATGGAACACATTATGTC +
Preference number: 6 (lower is better)
Translates to: ARLYELHVQSGC*QCWVEHGTHYV
Trigger: GACATAATGTGTTCCATGCTCTACCCAACACTGCCAACACCCTGATTGGACGTGCAGCTCATATAGCCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CAA 72 bp CAAAGTGTGATGCTCCTGGGTGAGATAAGTGGTGACTaGGGAGTGCAGGGTTACTGTGTCCAGGAATTGGGT +
Preference number: 6 (lower is better)
Translates to: QSVMLLGEISGD*GVQGYCVQELG
Trigger: ACCCAATTCCTGGACACAGTAACCCTGCACTCCCAAGTCACCACTTATCTCACCCAGGAGCATCACACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CAA 72 bp TGGGGTCTCAGCCATGCCATCCAGACAACAGGGTTCTaGAAGTTCAGGGTGATTCCCTTTGTCATTGGGGAT +
Preference number: 6 (lower is better)
Translates to: WGLSHAIQTTGF*KFRVIPFVIGD
Trigger: ATCCCCAATGACAAAGGGAATCACCCTGAACTTCAAGAACCCTGTTGTCTGGATGGCATGGCTGAGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 72 bp AGAGATGGAAGTTCCTGTCTTCAGCTCTTGGTTTCGTaGCACTTGGGAGGCAATAGTGTGAGTCACAGTGGG +
Preference number: 6 (lower is better)
Translates to: RDGSSCLQLLVS*HLGGNSVSHSG
Trigger: CCCACTGTGACTCACACTATTGCCTCCCAAGTGTCACGAAACCAAGAGCTGAAGACAGGAACTTCCATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 72 bp TGGCAGTGTTGGGTAGAGCATGGAACACATTATGTCTaGTCAAAGTGCAGTCCTTGGCTTCTACCAGAGGGC +
Preference number: 6 (lower is better)
Translates to: WQCWVEHGTHYV*SKCSPWLLPEG
Trigger: GCCCTCTGGTAGAAGCCAAGGACTGCACTTTGATCAGACATAATGTGTTCCATGCTCTACCCAACACTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 72 bp AGATGTGAAGCCAGCCAGGCAAGATCCTTGCTGATCTaGTCTGCTATCTTCTCTGGGTTGTTCAGCATCTGT +
Preference number: 6 (lower is better)
Translates to: RCEASQARSLLI*SAIFSGLFSIC
Trigger: ACAGATGCTGAACAACCCAGAGAAGATAGCAGAGCAGATCAGCAAGGATCTTGCCTGGCTGGCTTCACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CAA 72 bp CTGCTGATCTGGGGTGCAGACACAGACTTGGTTAGCTaGTTAAGTGCCAGCTCACGCTCTTCCTCTTCAAAA +
Preference number: 6 (lower is better)
Translates to: LLIWGADTDLVS*LSASSRSSSSK
Trigger: TTTTGAAGAGGAAGAGCGTGAGCTGGCACTTAACAAGCTAACCAAGTCTGTGTCTGCACCCCAGATCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CAA 90 bp AATGCCCTGTACCAGTTCAGCTCTAGGGCAGTACTTATTGCTAGATaGCACATCAATATAGGTCAGTGCTGGGGTCTGCCCTTCATCAGG +
Preference number: 6 (lower is better)
Translates to: NALYQFSSRAVLIAR*HINIGQCWGLPFIR
Trigger: CCTGATGAAGGGCAGACCCCAGCACTGACCTATATTGATGTGCAATCTAGCAATAAGTACTGCCCTAGAGCTGAACTGGTACAGGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 72 bp TCTGGGTTGTTCAGCATCTGTAACTCTGAGCACAGCTaGGAAAGTGTTTCTTCAACAGCAAGAGCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: SGLFSICNSEHS*ESVSSTARASS
Trigger: GCTGGAGGCTCTTGCTGTTGAAGAAACACTTTCTCAGCTGTGCTCAGAGTTACAGATGCTGAACAACCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 72 bp CACACATCGATAGGATTCCATGTGGAGACATTCTCCTaGACCTCTGGACGCCTAGTAACATCTTCATCAGAG +
Preference number: 6 (lower is better)
Translates to: HTSIGFHVETFS*TSGRLVTSSSE
Trigger: CTCTGATGAAGATGTTACTAGGCGTCCAGAGGTGCAGGAGAATGTCTCCACATGGAATCCTATCGATGTGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 72 bp CCTAGGGCCAGTCCAGCATTCATCTTCAGGTATGCCTaGTCTGTTTTGAAATTCACCAATGGTCAGGTACAC +
Preference number: 6 (lower is better)
Translates to: PRASPAFIFRYA*SVLKFTNGQVH
Trigger: GTGTACCTGACCATTGGTGAATTTCAAAACAGAGCAGGCATACCTGAAGATGAATGCTGGACTGGCCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 72 bp GTGCTGGGGTCTGCCCTTCATCAGGGCCTGGACTTCTaGTACATATGTCCGTATCTGTTAGTGAATCTTTTA +
Preference number: 6 (lower is better)
Translates to: VLGSALHQGLDF*YICPYLLVNLL
Trigger: TAAAAGATTCACTAACAGATACGGACATATGTAGCAGAAGTCCAGGCCCTGATGAAGGGCAGACCCCAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 72 bp GTACTTATTGCTAGATTGCACATCAATATAGGTCAGTaGTGGGGTCTGCCCTTCATCAGGGCCTGGACTTCT +
Preference number: 6 (lower is better)
Translates to: VLIARLHINIGQ*WGLPFIRAWTS
Trigger: AGAAGTCCAGGCCCTGATGAAGGGCAGACCCCAGCACTGACCTATATTGATGTGCAATCTAGCAATAAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CCA 72 bp TCTGGACGCCTAGTAACATCTTCATCAGAGCCCAGCTaGGGTGCTTCTGTAGTAGATAAGGGAATGTCCTTT +
Preference number: 6 (lower is better)
Translates to: SGRLVTSSSEPS*GASVVDKGMSF
Trigger: AAAGGACATTCCCTTATCTACTACAGAAGCACCCCAGCTGGGCTCTGATGAAGATGTTACTAGGCGTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CCA 72 bp CCCCTCCCTAGAGTCCTCAACTCAAGAGCAGCCGTTTaGTTTAAAGAGGTGGAATTATTCTGGCTTGTTCCT +
Preference number: 6 (lower is better)
Translates to: PLPRVLNSRAAV*FKEVELFWLVP
Trigger: AGGAACAAGCCAGAATAATTCCACCTCTTTAAACCAAACGGCTGCTCTTGAGTTGAGGACTCTAGGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CCA 72 bp CCTAGACCCACCATACGAAAGAGAAGTGTGTCTGGGTaGACTGTTTTCTTTGCTAGAAGGGTCCAGATCTTC +
Preference number: 6 (lower is better)
Translates to: PRPTIRKRSVSG*TVFFARRVQIF
Trigger: GAAGATCTGGACCCTTCTAGCAAAGAAAACAGTCCACCCAGACACACTTCTCTTTCGTATGGTGGGTCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CAA 72 bp TACCAGTTCAGCTCTAGGGCAGTACTTATTGCTAGATaGCACATCAATATAGGTCAGTGCTGGGGTCTGCCC +
Preference number: 6 (lower is better)
Translates to: YQFSSRAVLIAR*HINIGQCWGLP
Trigger: GGGCAGACCCCAGCACTGACCTATATTGATGTGCAATCTAGCAATAAGTACTGCCCTAGAGCTGAACTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CAA 72 bp TCAATGCCTGAATCAGATATTATGGAGGCTGACCTCTaGATAACGCCAGAGAGCGCTGAAAGATCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: SMPESDIMEADL*ITPESAERSSG
Trigger: GCCAGAGGATCTTTCAGCGCTCTCTGGCGTTATCAAGAGGTCAGCCTCCATAATATCTGATTCAGGCATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CAA 90 bp GGTTCACTTTCAATGCCTGAATCAGATATTATGGAGGCTGACCTCTaGATAACGCCAGAGAGCGCTGAAAGATCCTCTGGCTCTTCAGCA +
Preference number: 6 (lower is better)
Translates to: GSLSMPESDIMEADL*ITPESAERSSGSSA
Trigger: TGCTGAAGAGCCAGAGGATCTTTCAGCGCTCTCTGGCGTTATCAAGAGGTCAGCCTCCATAATATCTGATTCAGGCATTGAAAGTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CAA 90 bp TTGGGTAGAGCATGGAACACATTATGTCTGATCAAAGTGCAGTCCTaGGCTTCTACCAGAGGGCCCAAGAGGTTGTTGATCATTTCTGCA +
Preference number: 6 (lower is better)
Translates to: LGRAWNTLCLIKVQS*ASTRGPKRLLIISA
Trigger: TGCAGAAATGATCAACAACCTCTTGGGCCCTCTGGTAGAAGCCAAGGACTGCACTTTGATCAGACATAATGTGTTCCATGCTCTACCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 72 bp GCTTGGCACAGTCTTAACAATACCATAGCTCTCCCTTaGGCTCCTGTGTTCATGCTGAACATTAATGCCCTG +
Preference number: 6 (lower is better)
Translates to: AWHSLNNTIALP*APVFMLNINAL
Trigger: CAGGGCATTAATGTTCAGCATGAACACAGGAGCTCAAGGGAGAGCTATGGTATTGTTAAGACTGTGCCAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 72 bp CATTTGCGCAGATCAGCATTATCCCTGAAGGTCAGCTaGAAAAGGGAGCCAGATTTCTTCAGTTTCTGCATG +
Preference number: 6 (lower is better)
Translates to: HLRRSALSLKVS*KREPDFFSFCM
Trigger: CATGCAGAAACTGAAGAAATCTGGCTCCCTTTTGCAGCTGACCTTCAGGGATAATGCTGATCTGCGCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CAA 72 bp AACCGGGGTCTTGTAAGGACGGATCTGATGATAATGTaGCCAAGAGAATGGCCGATGAAGCTAATTCGGGAT +
Preference number: 6 (lower is better)
Translates to: NRGLVRTDLMIM*PREWPMKLIRD
Trigger: ATCCCGAATTAGCTTCATCGGCCATTCTCTTGGCAACATTATCATCAGATCCGTCCTTACAAGACCCCGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CAA 90 bp GACCCACCATACGAAAGAGAAGTGTGTCTGGGTGGACTGTTTTCTTaGCTAGAAGGGTCCAGATCTTCAGAAAAACCTGCTGTGTTCTTT +
Preference number: 6 (lower is better)
Translates to: DPPYEREVCLGGLFS*LEGSRSSEKPAVFF
Trigger: AAAGAACACAGCAGGTTTTTCTGAAGATCTGGACCCTTCTAGCAAAGAAAACAGTCCACCCAGACACACTTCTCTTTCGTATGGTGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CCA 72 bp CTTCAGGTATGCCTGCTCTGTTTTGAAATTCACCAATaGTCAGGTACACCTGAGATTCTGAGCACACATCGA +
Preference number: 6 (lower is better)
Translates to: LQVCLLCFEIHQ*SGTPEILSTHR
Trigger: TCGATGTGTGCTCAGAATCTCAGGTGTACCTGACCATTGGTGAATTTCAAAACAGAGCAGGCATACCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS GCA 72 bp TTCTTTGCTAGAAGGGTCCAGATCTTCAGAAAAACCTaGTGTGTTCTTTATGGTGTCTGCACCTTCAGCAGA +
Preference number: 6 (lower is better)
Translates to: FFARRVQIFRKT*CVLYGVCTFSR
Trigger: TCTGCTGAAGGTGCAGACACCATAAAGAACACAGCAGGTTTTTCTGAAGATCTGGACCCTTCTAGCAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CAA 72 bp AGTCCAGCATTCATCTTCAGGTATGCCTGCTCTGTTTaGAAATTCACCAATGGTCAGGTACACCTGAGATTC +
Preference number: 6 (lower is better)
Translates to: SPAFIFRYACSV*KFTNGQVHLRF
Trigger: GAATCTCAGGTGTACCTGACCATTGGTGAATTTCAAAACAGAGCAGGCATACCTGAAGATGAATGCTGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CAA 72 bp TACGAAAGAGAAGTGTGTCTGGGTGGACTGTTTTCTTaGCTAGAAGGGTCCAGATCTTCAGAAAAACCTGCT +
Preference number: 6 (lower is better)
Translates to: YEREVCLGGLFS*LEGSRSSEKPA
Trigger: AGCAGGTTTTTCTGAAGATCTGGACCCTTCTAGCAAAGAAAACAGTCCACCCAGACACACTTCTCTTTCGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS TCA 72 bp TTGAAATTCACCAATGGTCAGGTACACCTGAGATTCTaGGCACACATCGATAGGATTCCATGTGGAGACATT +
Preference number: 6 (lower is better)
Translates to: LKFTNGQVHLRF*AHIDRIPCGDI
Trigger: AATGTCTCCACATGGAATCCTATCGATGTGTGCTCAGAATCTCAGGTGTACCTGACCATTGGTGAATTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10
CDS CCA 72 bp TCATTTATGGAAACTTCTTCGTTTCTGTATAAGATCTaGAAGACACGACTGTGCACAGCACTCTCGTGGACA +
Preference number: 6 (lower is better)
Translates to: SFMETSSFLYKI*KTRLCTALSWT
Trigger: TGTCCACGAGAGTGCTGTGCACAGTCGTGTCTTCCAGATCTTATACAGAAACGAAGAAGTTTCCATAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022953.10
ENSMUST00000229189.2
CDS CAA 72 bp GAGGCATTATGTCTTCTATTCAATGTCATGGTATCATaGACACTTAACGAACTATTTTGTACACCTGTAGAA +
Preference number: 6 (lower is better)
Translates to: EALCLLFNVMVS*TLNELFCTPVE
Trigger: TTCTACAGGTGTACAAAATAGTTCGTTAAGTGTCAATGATACCATGACATTGAATAGAAGACATAATGCCTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022953.10