Pregenerated sensors for FAM133B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058503Ensembl transcript IDs: ENSMUST00000115527.8, ENSMUST00000197082.5, ENSMUST00000199666.5
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGTAAGGGTCCTGGTCTTCATGGACGCTACGGCGAGTCTGAGCTaGAGCTGGCGGCCTTCTTTTTCTTCTTCTTGCTGTGCTTCTTAT | + |
|
Preference number: 1 (lower is better) Translates to: WVRVLVFMDATASLS*SWRPSFSSSCCASY Trigger: ATAAGAAGCACAGCAAGAAGAAGAAAAAGAAGGCCGCCAGCTCCAGCTCAGACTCGCCGTAGCGTCCATGAAGACCAGGACCCTTACCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199666.5 |
||
| 3UTR GCA 90 bp | TCTGTTGTTCTCTCACGCTCTTCACCGCTTTTCTTCCTTTTTGCTTaGACCTCTCCACAGTCTGACTCTGACAGCGACTCAGATGACAAC | + |
|
Preference number: 1 (lower is better) Translates to: SVVLSRSSPLFFLFA*TSPQSDSDSDSDDN Trigger: GTTGTCATCTGAGTCGCTGTCAGAGTCAGACTGTGGAGAGGTGCAAGCAAAAAGGAAGAAAAGCGGTGAAGAGCGTGAGAGAACAACAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199666.5 |
||
| 3UTR TCA 90 bp | AGGCAACAATCATGGCCCTTCACACAGCAGAATCCAAGTGGCTACTaGCTAGTCCAGGACAAGTCTAAGAACAAGGGAATTCATGCACGT | + |
|
Preference number: 1 (lower is better) Translates to: RQQSWPFTQQNPSGY*LVQDKSKNKGIHAR Trigger: ACGTGCATGAATTCCCTTGTTCTTAGACTTGTCCTGGACTAGTCAGTAGCCACTTGGATTCTGCTGTGTGAAGGGCCATGATTGTTGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115527.8 ENSMUST00000197082.5 ENSMUST00000199666.5 |
||
| 3UTR-3UTR TCA 90 bp | CATAACCTCAGTCGGGCAGGAATGACGGTGCCCAGCTCTGTCCTCCCAGGAAGCCGCAATCTTCACAGTTaGGCTCCTTTGACACTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: HNLSRAGMTVPSSVLPGSRNLHS*APLTLH Trigger: GTGCAGTGTCAAAGGAGCTCAACTGTGAAGATTGCG...GCTTCCTGGGAGGACAGAGCTGGGCACCGTCATTCCTGCCCGACTGAGGTTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115527.8 ENSMUST00000197082.5 ENSMUST00000199666.5 |
||
| 3UTR-3UTR CCA 90 bp | CATAACCTCAGTCGGGCAGGAATGACGGTGCCCAGCTCTGTCCTCCCAGGAAGCAGTCTGAGCTGGAGCTaGCGGCCTTCTTTTTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: HNLSRAGMTVPSSVLPGSSLSWS*RPSFSS Trigger: AGAAGAAAAAGAAGGCCGCCAGCTCCAGCTCAGACT...GCTTCCTGGGAGGACAGAGCTGGGCACCGTCATTCCTGCCCGACTGAGGTTATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199666.5 |
||
| 3UTR-3UTR TCA 90 bp | CATAACCTCAGTCGGGCAGGAATGACGGTGCCCAGCTCTGTCCTCCCAGGAAGCAATCCAAGTGGCTACTaGCTAGTCCAGGACAAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: HNLSRAGMTVPSSVLPGSNPSGY*LVQDKS Trigger: AGACTTGTCCTGGACTAGTCAGTAGCCACTTGGATT...GCTTCCTGGGAGGACAGAGCTGGGCACCGTCATTCCTGCCCGACTGAGGTTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115527.8 ENSMUST00000197082.5 ENSMUST00000199666.5 |
||
| 3UTR-3UTR TCA 90 bp | CATAACCTCAGTCGGGCAGGAATGACGGTGCCCAGCTCTGTCCTCCCAGGAAGCAAGAGGAAAAGGTGTTaGAGCAGCAGGCAACAATCA | + |
|
Preference number: 2 (lower is better) Translates to: HNLSRAGMTVPSSVLPGSKRKRC*SSRQQS Trigger: TGATTGTTGCCTGCTGCTTCAACACCTTTTCCTCTT...GCTTCCTGGGAGGACAGAGCTGGGCACCGTCATTCCTGCCCGACTGAGGTTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115527.8 ENSMUST00000197082.5 ENSMUST00000199666.5 |
||
| 3UTR-3UTR TCA 90 bp | CTATCAAGCTCAGAAAGTACCTGCGTCTACTCAACAGTCCCTCTCCAAAGCCCACGCAATCTTCACAGTTaGGCTCCTTTGACACTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: LSSSESTCVYSTVPLQSPRNLHS*APLTLH Trigger: GTGCAGTGTCAAAGGAGCTCAACTGTGAAGATTGCG...TGGGCTTTGGAGAGGGACTGTTGAGTAGACGCAGGTACTTTCTGAGCTTGATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197082.5 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTGTTGTTCTCTCACGCTCTTCACCGCTTTTCTTCCTTTTTGCTTGCACCTCGCAATCTTCACAGTTaGGCTCCTTTGACACTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: CLLFSHALHRFSSFLLAPRNLHS*APLTLH Trigger: GTGCAGTGTCAAAGGAGCTCAACTGTGAAGATTGCG...AGGTGCAAGCAAAAAGGAAGAAAAGCGGTGAAGAGCGTGAGAGAACAACAGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199666.5 |
||
| 3UTR-3UTR TCA 90 bp | TATCAAGCTCAGAAAGTACCTGCGTCTACTCAACAGTCCCTCTCCAAAGCCCAAAATCCAAGTGGCTACTaGCTAGTCCAGGACAAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: YQAQKVPASTQQSLSKAQNPSGY*LVQDKS Trigger: AGACTTGTCCTGGACTAGTCAGTAGCCACTTGGATT...TTGGGCTTTGGAGAGGGACTGTTGAGTAGACGCAGGTACTTTCTGAGCTTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197082.5 |
||
| 3UTR-3UTR TCA 90 bp | CTATCAAGCTCAGAAAGTACCTGCGTCTACTCAACAGTCCCTCTCCAAAGCCCAAAGAGGAAAAGGTGTTaGAGCAGCAGGCAACAATCA | + |
|
Preference number: 2 (lower is better) Translates to: LSSSESTCVYSTVPLQSPKRKRC*SSRQQS Trigger: TGATTGTTGCCTGCTGCTTCAACACCTTTTCCTCTT...TGGGCTTTGGAGAGGGACTGTTGAGTAGACGCAGGTACTTTCTGAGCTTGATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197082.5 |
||
| 3UTR-3UTR GCA 90 bp | TGTCTGTTGTTCTCTCACGCTCTTCACCGCTTTTCTTCCTTTTTGCTTGCACCTTTTTTGAACCATCCTTaGTGTCTGAAGCCGAATCCG | + |
|
Preference number: 2 (lower is better) Translates to: CLLFSHALHRFSSFLLAPFLNHP*CLKPNP Trigger: CGGATTCGGCTTCAGACAGCAAGGATGGTTCAAAAA...AGGTGCAAGCAAAAAGGAAGAAAAGCGGTGAAGAGCGTGAGAGAACAACAGACA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000199666.5 |
||
| 3UTR-3UTR CAA 90 bp | CATAACCTCAGTCGGGCAGGAATGACGGTGCCCAGCTCTGTCCTCCCAGGAAGCTCGCAATCTTCACAGTaGAGCTCCTTTGACACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: HNLSRAGMTVPSSVLPGSSQSSQ*SSFDTA Trigger: TGCAGTGTCAAAGGAGCTCAACTGTGAAGATTGCGA...GCTTCCTGGGAGGACAGAGCTGGGCACCGTCATTCCTGCCCGACTGAGGTTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115527.8 ENSMUST00000197082.5 ENSMUST00000199666.5 |
||
| 3UTR-3UTR CAA 90 bp | CATAACCTCAGTCGGGCAGGAATGACGGTGCCCAGCTCTGTCCTCCCAGGAAGCGAAGAGGAAAAGGTGTaGAAGCAGCAGGCAACAATC | + |
|
Preference number: 3 (lower is better) Translates to: HNLSRAGMTVPSSVLPGSEEEKV*KQQATI Trigger: GATTGTTGCCTGCTGCTTCAACACCTTTTCCTCTTC...GCTTCCTGGGAGGACAGAGCTGGGCACCGTCATTCCTGCCCGACTGAGGTTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115527.8 ENSMUST00000197082.5 ENSMUST00000199666.5 |
||
| 3UTR CCA 72 bp | GTCCTGGTCTTCATGGACGCTACGGCGAGTCTGAGCTaGAGCTGGCGGCCTTCTTTTTCTTCTTCTTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VLVFMDATASLS*SWRPSFSSSCC Trigger: ACAGCAAGAAGAAGAAAAAGAAGGCCGCCAGCTCCAGCTCAGACTCGCCGTAGCGTCCATGAAGACCAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199666.5 |
||
| 3UTR-3UTR CAA 90 bp | CGCTACGGCGAGTCTGAGCTGGAGCTGGCGGCCTTCTTTTTCTTCTTCTTGCTGTTTTGGCTTTGTCTGTaGTTCTCTCACGCTCTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: RYGESELELAAFFFFFLLFWLCL*FSHALH Trigger: GTGAAGAGCGTGAGAGAACAACAGACAAAGCCAAAA...CAGCAAGAAGAAGAAAAAGAAGGCCGCCAGCTCCAGCTCAGACTCGCCGTAGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199666.5 |
||
| 3UTR GCA 72 bp | CTCTCACGCTCTTCACCGCTTTTCTTCCTTTTTGCTTaGACCTCTCCACAGTCTGACTCTGACAGCGACTCA | + |
|
Preference number: 3 (lower is better) Translates to: LSRSSPLFFLFA*TSPQSDSDSDS Trigger: TGAGTCGCTGTCAGAGTCAGACTGTGGAGAGGTGCAAGCAAAAAGGAAGAAAAGCGGTGAAGAGCGTGAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199666.5 |
||
| 3UTR-3UTR CAA 90 bp | TATCAAGCTCAGAAAGTACCTGCGTCTACTCAACAGTCCCTCTCCAAAGCCCAATCGCAATCTTCACAGTaGAGCTCCTTTGACACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: YQAQKVPASTQQSLSKAQSQSSQ*SSFDTA Trigger: TGCAGTGTCAAAGGAGCTCAACTGTGAAGATTGCGA...TTGGGCTTTGGAGAGGGACTGTTGAGTAGACGCAGGTACTTTCTGAGCTTGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197082.5 |
||
| 3UTR-3UTR CAA 90 bp | TATCAAGCTCAGAAAGTACCTGCGTCTACTCAACAGTCCCTCTCCAAAGCCCAAGAAGAGGAAAAGGTGTaGAAGCAGCAGGCAACAATC | + |
|
Preference number: 3 (lower is better) Translates to: YQAQKVPASTQQSLSKAQEEEKV*KQQATI Trigger: GATTGTTGCCTGCTGCTTCAACACCTTTTCCTCTTC...TTGGGCTTTGGAGAGGGACTGTTGAGTAGACGCAGGTACTTTCTGAGCTTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197082.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTGTTGTTCTCTCACGCTCTTCACCGCTTTTCTTCCTTTTTGCTTGCACCTTCGCAATCTTCACAGTaGAGCTCCTTTGACACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: CLLFSHALHRFSSFLLAPSQSSQ*SSFDTA Trigger: TGCAGTGTCAAAGGAGCTCAACTGTGAAGATTGCGA...AGGTGCAAGCAAAAAGGAAGAAAAGCGGTGAAGAGCGTGAGAGAACAACAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199666.5 |
||
| 3UTR TCA 72 bp | TCATGGCCCTTCACACAGCAGAATCCAAGTGGCTACTaGCTAGTCCAGGACAAGTCTAAGAACAAGGGAATT | + |
|
Preference number: 3 (lower is better) Translates to: SWPFTQQNPSGY*LVQDKSKNKGI Trigger: AATTCCCTTGTTCTTAGACTTGTCCTGGACTAGTCAGTAGCCACTTGGATTCTGCTGTGTGAAGGGCCATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115527.8 ENSMUST00000197082.5 ENSMUST00000199666.5 |
||
| CDS-3UTR TCA 90 bp | CATAACCTCAGTCGGGCAGGAATGACGGTGCCCAGCTCTGTCCTCCCAGGAAGCAGTGTCCTTGCTGTCTaGAGCCGAATCCGACCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HNLSRAGMTVPSSVLPGSSVLAV*SRIRPR Trigger: TCGGGGTCGGATTCGGCTTCAGACAGCAAGGACACT...GCTTCCTGGGAGGACAGAGCTGGGCACCGTCATTCCTGCCCGACTGAGGTTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197082.5 |
||
| CDS-3UTR GCA 90 bp | CATAACCTCAGTCGGGCAGGAATGACGGTGCCCAGCTCTGTCCTCCCAGGAAGCTTTTTGAACCATCCTTaGTGTCTGAAGCCGAATCCG | + |
|
Preference number: 4 (lower is better) Translates to: HNLSRAGMTVPSSVLPGSFLNHP*CLKPNP Trigger: CGGATTCGGCTTCAGACAGCAAGGATGGTTCAAAAA...GCTTCCTGGGAGGACAGAGCTGGGCACCGTCATTCCTGCCCGACTGAGGTTATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115527.8 |
||
| CDS-3UTR GCA 90 bp | CATAACCTCAGTCGGGCAGGAATGACGGTGCCCAGCTCTGTCCTCCCAGGAAGCTTCTTCCTTTTTGCTTaGACCTCTCCACAGTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HNLSRAGMTVPSSVLPGSFFLFA*TSPQSD Trigger: GTCAGACTGTGGAGAGGTGCAAGCAAAAAGGAAGAA...GCTTCCTGGGAGGACAGAGCTGGGCACCGTCATTCCTGCCCGACTGAGGTTATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115527.8 ENSMUST00000197082.5 |
||
| CDS-3UTR CCA 90 bp | CATAACCTCAGTCGGGCAGGAATGACGGTGCCCAGCTCTGTCCTCCCAGGAAGCACTCAGCCAAAGCCTTaGAGCCCTTCTTTTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HNLSRAGMTVPSSVLPGSTQPKP*SPSFSF Trigger: AAAAGAAAAAGAAGGGCTCCAAGGCTTTGGCTGAGT...GCTTCCTGGGAGGACAGAGCTGGGCACCGTCATTCCTGCCCGACTGAGGTTATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115527.8 ENSMUST00000197082.5 ENSMUST00000199666.5 |
||
| CDS-3UTR GCA 90 bp | CATAACCTCAGTCGGGCAGGAATGACGGTGCCCAGCTCTGTCCTCCCAGGAAGCTTGCTGTGCTTCTTATaGTTCCTTCTCTTTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HNLSRAGMTVPSSVLPGSLLCFL*FLLFLA Trigger: AGCCAAAAAGAGAAGGAAGCATAAGAAGCACAGCAA...GCTTCCTGGGAGGACAGAGCTGGGCACCGTCATTCCTGCCCGACTGAGGTTATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115527.8 ENSMUST00000197082.5 |
||
| CDS-3UTR GCA 90 bp | CATAACCTCAGTCGGGCAGGAATGACGGTGCCCAGCTCTGTCCTCCCAGGAAGCTTCTTCTTCTTGCTGTaGTTCTTATGCTTCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HNLSRAGMTVPSSVLPGSFFFLL*FLCFLL Trigger: GAGAAGGAAGCATAAGAAGCACAGCAAGAAGAAGAA...GCTTCCTGGGAGGACAGAGCTGGGCACCGTCATTCCTGCCCGACTGAGGTTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115527.8 ENSMUST00000197082.5 |
||
| CDS-3UTR CCA 90 bp | CATAACCTCAGTCGGGCAGGAATGACGGTGCCCAGCTCTGTCCTCCCAGGAAGCGCTTCCTTCTCTTTTTaGCTTTGTCTGTTGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HNLSRAGMTVPSSVLPGSASFSF*LCLLFS Trigger: AGAGAACAACAGACAAAGCCAAAAAGAGAAGGAAGC...GCTTCCTGGGAGGACAGAGCTGGGCACCGTCATTCCTGCCCGACTGAGGTTATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115527.8 ENSMUST00000197082.5 |
||
| 3UTR CAA 72 bp | TCATGCACGTTACTAAGTGTGTCGCAATCTTCACAGTaGAGCTCCTTTGACACTGCACTGGGTAAGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SCTLLSVSQSSQ*SSFDTALGKGP Trigger: AGGACCCTTACCCAGTGCAGTGTCAAAGGAGCTCAACTGTGAAGATTGCGACACACTTAGTAACGTGCATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115527.8 ENSMUST00000197082.5 ENSMUST00000199666.5 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTTGTTCTCTCACGCTCTTCACCGCTTTTCTTCCTTTTTGCTTGCACCTACTCAGCCAAAGCCTTaGAGCCCTTCTTTTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLLFSHALHRFSSFLLAPTQPKP*SPSFSF Trigger: AAAAGAAAAAGAAGGGCTCCAAGGCTTTGGCTGAGT...AGGTGCAAGCAAAAAGGAAGAAAAGCGGTGAAGAGCGTGAGAGAACAACAGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000199666.5 |
||
| CDS-3UTR CCA 90 bp | TATCAAGCTCAGAAAGTACCTGCGTCTACTCAACAGTCCCTCTCCAAAGCCCAAGCTTCCTTCTCTTTTTaGCTTTGTCTGTTGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YQAQKVPASTQQSLSKAQASFSF*LCLLFS Trigger: AGAGAACAACAGACAAAGCCAAAAAGAGAAGGAAGC...TTGGGCTTTGGAGAGGGACTGTTGAGTAGACGCAGGTACTTTCTGAGCTTGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197082.5 |
||
| CDS-3UTR CAA 90 bp | CATAACCTCAGTCGGGCAGGAATGACGGTGCCCAGCTCTGTCCTCCCAGGAAGCTTTTCCAGCTGTTCCTaGACTTCCTCCCAGGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HNLSRAGMTVPSSVLPGSFSSCS*TSSQVG Trigger: GCCTACCTGGGAGGAAGTCAAGGAACAGCTGGAAAA...GCTTCCTGGGAGGACAGAGCTGGGCACCGTCATTCCTGCCCGACTGAGGTTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115527.8 ENSMUST00000197082.5 ENSMUST00000199666.5 |
||
| CDS-3UTR CAA 90 bp | CATAACCTCAGTCGGGCAGGAATGACGGTGCCCAGCTCTGTCCTCCCAGGAAGCCGCTTTTCTTCCTTTTaGCTTGCACCTCTCCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: HNLSRAGMTVPSSVLPGSRFSSF*LAPLHS Trigger: ACTGTGGAGAGGTGCAAGCAAAAAGGAAGAAAAGCG...GCTTCCTGGGAGGACAGAGCTGGGCACCGTCATTCCTGCCCGACTGAGGTTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115527.8 ENSMUST00000197082.5 |
||
| CDS-3UTR CAA 90 bp | CATAACCTCAGTCGGGCAGGAATGACGGTGCCCAGCTCTGTCCTCCCAGGAAGCAACTCAGCCAAAGCCTaGGAGCCCTTCTTTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HNLSRAGMTVPSSVLPGSNSAKA*EPFFFF Trigger: AAAGAAAAAGAAGGGCTCCAAGGCTTTGGCTGAGTT...GCTTCCTGGGAGGACAGAGCTGGGCACCGTCATTCCTGCCCGACTGAGGTTATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115527.8 ENSMUST00000197082.5 ENSMUST00000199666.5 |
||
| CDS-3UTR CAA 90 bp | CATAACCTCAGTCGGGCAGGAATGACGGTGCCCAGCTCTGTCCTCCCAGGAAGCTTTTGGCTTTGTCTGTaGTTCTCTCACGCTCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: HNLSRAGMTVPSSVLPGSFWLCL*FSHALH Trigger: GTGAAGAGCGTGAGAGAACAACAGACAAAGCCAAAA...GCTTCCTGGGAGGACAGAGCTGGGCACCGTCATTCCTGCCCGACTGAGGTTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115527.8 ENSMUST00000197082.5 |
||
| CDS-3UTR CAA 90 bp | CATAACCTCAGTCGGGCAGGAATGACGGTGCCCAGCTCTGTCCTCCCAGGAAGCCTTCTCTTTTTGGCTTaGTCTGTTGTTCTCTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: HNLSRAGMTVPSSVLPGSLLFLA*SVVLSR Trigger: GCGTGAGAGAACAACAGACAAAGCCAAAAAGAGAAG...GCTTCCTGGGAGGACAGAGCTGGGCACCGTCATTCCTGCCCGACTGAGGTTATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115527.8 ENSMUST00000197082.5 |
||
| CDS-3UTR CAA 90 bp | CATAACCTCAGTCGGGCAGGAATGACGGTGCCCAGCTCTGTCCTCCCAGGAAGCTGCTTCCTTCTCTTTTaGGCTTTGTCTGTTGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HNLSRAGMTVPSSVLPGSCFLLF*ALSVVL Trigger: GAGAACAACAGACAAAGCCAAAAAGAGAAGGAAGCA...GCTTCCTGGGAGGACAGAGCTGGGCACCGTCATTCCTGCCCGACTGAGGTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115527.8 ENSMUST00000197082.5 |
||
| CDS-3UTR CAA 90 bp | TATCAAGCTCAGAAAGTACCTGCGTCTACTCAACAGTCCCTCTCCAAAGCCCAATTTTCCAGCTGTTCCTaGACTTCCTCCCAGGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: YQAQKVPASTQQSLSKAQFSSCS*TSSQVG Trigger: GCCTACCTGGGAGGAAGTCAAGGAACAGCTGGAAAA...TTGGGCTTTGGAGAGGGACTGTTGAGTAGACGCAGGTACTTTCTGAGCTTGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197082.5 |
||
| CDS-3UTR CAA 90 bp | TGTCTGTTGTTCTCTCACGCTCTTCACCGCTTTTCTTCCTTTTTGCTTGCACCTTTTTCCAGCTGTTCCTaGACTTCCTCCCAGGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CLLFSHALHRFSSFLLAPFSSCS*TSSQVG Trigger: GCCTACCTGGGAGGAAGTCAAGGAACAGCTGGAAAA...AGGTGCAAGCAAAAAGGAAGAAAAGCGGTGAAGAGCGTGAGAGAACAACAGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000199666.5 |
||
| CDS-3UTR CAA 90 bp | TATCAAGCTCAGAAAGTACCTGCGTCTACTCAACAGTCCCTCTCCAAAGCCCAACGCTTTTCTTCCTTTTaGCTTGCACCTCTCCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: YQAQKVPASTQQSLSKAQRFSSF*LAPLHS Trigger: ACTGTGGAGAGGTGCAAGCAAAAAGGAAGAAAAGCG...TTGGGCTTTGGAGAGGGACTGTTGAGTAGACGCAGGTACTTTCTGAGCTTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197082.5 |
||
| CDS-3UTR CAA 90 bp | TATCAAGCTCAGAAAGTACCTGCGTCTACTCAACAGTCCCTCTCCAAAGCCCAATTTTGGCTTTGTCTGTaGTTCTCTCACGCTCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: YQAQKVPASTQQSLSKAQFWLCL*FSHALH Trigger: GTGAAGAGCGTGAGAGAACAACAGACAAAGCCAAAA...TTGGGCTTTGGAGAGGGACTGTTGAGTAGACGCAGGTACTTTCTGAGCTTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197082.5 |
||
| CDS-3UTR CAA 90 bp | TATCAAGCTCAGAAAGTACCTGCGTCTACTCAACAGTCCCTCTCCAAAGCCCAACTTCTCTTTTTGGCTTaGTCTGTTGTTCTCTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: YQAQKVPASTQQSLSKAQLLFLA*SVVLSR Trigger: GCGTGAGAGAACAACAGACAAAGCCAAAAAGAGAAG...TTGGGCTTTGGAGAGGGACTGTTGAGTAGACGCAGGTACTTTCTGAGCTTGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197082.5 |
||
| CDS-3UTR CAA 90 bp | CTATCAAGCTCAGAAAGTACCTGCGTCTACTCAACAGTCCCTCTCCAAAGCCCATGCTTCCTTCTCTTTTaGGCTTTGTCTGTTGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSSSESTCVYSTVPLQSPCFLLF*ALSVVL Trigger: GAGAACAACAGACAAAGCCAAAAAGAGAAGGAAGCA...TGGGCTTTGGAGAGGGACTGTTGAGTAGACGCAGGTACTTTCTGAGCTTGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197082.5 |
||
| CDS-3UTR CAA 90 bp | CTTTTTGGCTTTGTCTGTTGTTCTCTCACGCTCTTCACCGCTTTTCTTCCTTTTAACTCAGCCAAAGCCTaGGAGCCCTTCTTTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LFGFVCCSLTLFTAFLPFNSAKA*EPFFFF Trigger: AAAGAAAAAGAAGGGCTCCAAGGCTTTGGCTGAGTT...AAAAGGAAGAAAAGCGGTGAAGAGCGTGAGAGAACAACAGACAAAGCCAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000199666.5 |
||