Pregenerated sensors for FAM131C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006218Ensembl transcript IDs: ENSMUST00000006380.5
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | AGTCCTGGAGCAGGCTGTGAGCAGGTCCATGGAGGCACTGAGCGGTaGACAGGAGTAACAGCCAGCCTCCTCACCACGATCCACCCTGTG | + |
Preference number: 1 (lower is better) Translates to: SPGAGCEQVHGGTER*TGVTASLLTTIHPV Trigger: CACAGGGTGGATCGTGGTGAGGAGGCTGGCTGTTACTCCTGTGCACCGCTCAGTGCCTCCATGGACCTGCTCACAGCCTGCTCCAGGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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3UTR GCA 90 bp | TCCTCACCACGATCCACCCTGTGTTTGTACGGAGGAGTCGAGAGATaGCCCGTGGTACAGTGGTACAGCTGGGCTCCCAGCAGGGTGTGC | + |
Preference number: 1 (lower is better) Translates to: SSPRSTLCLYGGVER*PVVQWYSWAPSRVC Trigger: GCACACCCTGCTGGGAGCCCAGCTGTACCACTGTACCACGGGGCATCTCTCGACTCCTCCGTACAAACACAGGGTGGATCGTGGTGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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3UTR CCA 90 bp | TTGTACGGAGGAGTCGAGAGATGCCCCGTGGTACAGTGGTACAGCTaGGCTCCCAGCAGGGTGTGCAGACAACGGACTGGCCATCTTGCC | + |
Preference number: 1 (lower is better) Translates to: LYGGVERCPVVQWYS*APSRVCRQRTGHLA Trigger: GGCAAGATGGCCAGTCCGTTGTCTGCACACCCTGCTGGGAGCCCAGCTGTACCACTGTACCACGGGGCATCTCTCGACTCCTCCGTACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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3UTR CCA 90 bp | CACGATCCACCCTGTGTTTGTACGGAGGAGTCGAGAGATGCCCCGTaGTACAGTGGTACAGCTGGGCTCCCAGCAGGGTGTGCAGACAAC | + |
Preference number: 1 (lower is better) Translates to: HDPPCVCTEESRDAP*YSGTAGLPAGCADN Trigger: GTTGTCTGCACACCCTGCTGGGAGCCCAGCTGTACCACTGTACCACGGGGCATCTCTCGACTCCTCCGTACAAACACAGGGTGGATCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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3UTR-3UTR CCA 90 bp | AGAGAGGAAGGACAGACAGACAGTCCAGTGACTAGAGAGAGTCCAGGAGAAACACAGGCTGAGCCCAGGTaGAGGTTGGCTCCCCAGACC | + |
Preference number: 2 (lower is better) Translates to: REEGQTDSPVTRESPGETQAEPR*RLAPQT Trigger: GGTCTGGGGAGCCAACCTCCACCTGGGCTCAGCCTG...TGTTTCTCCTGGACTCTCTCTAGTCACTGGACTGTCTGTCTGTCCTTCCTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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3UTR CCA 72 bp | GGAGTCGAGAGATGCCCCGTGGTACAGTGGTACAGCTaGGCTCCCAGCAGGGTGTGCAGACAACGGACTGGC | + |
Preference number: 3 (lower is better) Translates to: GVERCPVVQWYS*APSRVCRQRTG Trigger: GCCAGTCCGTTGTCTGCACACCCTGCTGGGAGCCCAGCTGTACCACTGTACCACGGGGCATCTCTCGACTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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3UTR GCA 72 bp | GCAGGCTGTGAGCAGGTCCATGGAGGCACTGAGCGGTaGACAGGAGTAACAGCCAGCCTCCTCACCACGATC | + |
Preference number: 3 (lower is better) Translates to: AGCEQVHGGTER*TGVTASLLTTI Trigger: GATCGTGGTGAGGAGGCTGGCTGTTACTCCTGTGCACCGCTCAGTGCCTCCATGGACCTGCTCACAGCCTGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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3UTR CCA 72 bp | CCCTGTGTTTGTACGGAGGAGTCGAGAGATGCCCCGTaGTACAGTGGTACAGCTGGGCTCCCAGCAGGGTGT | + |
Preference number: 3 (lower is better) Translates to: PCVCTEESRDAP*YSGTAGLPAGC Trigger: ACACCCTGCTGGGAGCCCAGCTGTACCACTGTACCACGGGGCATCTCTCGACTCCTCCGTACAAACACAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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3UTR CCA 72 bp | TTGTACGGAGGAGTCGAGAGATGCCCCGTGGTACAGTaGTACAGCTGGGCTCCCAGCAGGGTGTGCAGACAA | + |
Preference number: 3 (lower is better) Translates to: LYGGVERCPVVQ*YSWAPSRVCRQ Trigger: TTGTCTGCACACCCTGCTGGGAGCCCAGCTGTACCACTGTACCACGGGGCATCTCTCGACTCCTCCGTACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS-3UTR GCA 90 bp | GGAGCAGGCTGTGAGCAGGTCCATGGAGGCACTGAGCGGTGCACAGGAGTAACAAGCCGCTGCCGGTGGTaGTGCTGGGTGGGGCTAGGG | + |
Preference number: 4 (lower is better) Translates to: GAGCEQVHGGTERCTGVTSRCRW*CWVGLG Trigger: CCCTAGCCCCACCCAGCAGCACCACCGGCAGCGGCT...TGTTACTCCTGTGCACCGCTCAGTGCCTCCATGGACCTGCTCACAGCCTGCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS-3UTR GCA 90 bp | AGAGATGCCCCGTGGTACAGTGGTACAGCTGGGCTCCCAGCAGGGTGTGCAGACGACGGCAGCGAGCCATaGAAGTGGGCCCTGTCATCG | + |
Preference number: 4 (lower is better) Translates to: RDAPWYSGTAGLPAGCADDGSEP*KWALSS Trigger: CGATGACAGGGCCCACTTGCATGGCTCGCTGCCGTC...GTCTGCACACCCTGCTGGGAGCCCAGCTGTACCACTGTACCACGGGGCATCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS-3UTR CCA 90 bp | CAGGTCCATGGAGGCACTGAGCGGTGCACAGGAGTAACAGCCAGCCTCCTCACCAGGAGGTCTGTGCCCTaGGGCCTGGGGCTGTTTTTG | + |
Preference number: 4 (lower is better) Translates to: QVHGGTERCTGVTASLLTRRSVP*GLGLFL Trigger: CAAAAACAGCCCCAGGCCCCAGGGCACAGACCTCCT...GGTGAGGAGGCTGGCTGTTACTCCTGTGCACCGCTCAGTGCCTCCATGGACCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS-3UTR TCA 90 bp | GGAGCAGGCTGTGAGCAGGTCCATGGAGGCACTGAGCGGTGCACAGGAGTAACAAGGGGGTTCCTCTGGTaGGGGCCAGCCATCATTCAG | + |
Preference number: 4 (lower is better) Translates to: GAGCEQVHGGTERCTGVTRGFLW*GPAIIQ Trigger: CTGAATGATGGCTGGCCCTCACCAGAGGAACCCCCT...TGTTACTCCTGTGCACCGCTCAGTGCCTCCATGGACCTGCTCACAGCCTGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS-3UTR GCA 90 bp | GGACAGACAGACAGTCCAGTGACTAGAGAGAGTCCAGGAGAAACAGTCCCACCTCGCTGCCGGTGGTGCTaGTGGGTGGGGCTAGGGGGT | + |
Preference number: 4 (lower is better) Translates to: GQTDSPVTRESPGETVPPRCRWC*WVGLGG Trigger: ACCCCCTAGCCCCACCCAGCAGCACCACCGGCAGCG...AGGTGGGACTGTTTCTCCTGGACTCTCTCTAGTCACTGGACTGTCTGTCTGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS-3UTR CCA 90 bp | CCAGTGACTAGAGAGAGTCCAGGAGAAACAGTCCCACCTTCCAGGCAGATGCCCAGCTGGAAGGCACCCTaGGTACTGTCCTCGGGCTGC | + |
Preference number: 4 (lower is better) Translates to: PVTRESPGETVPPSRQMPSWKAP*VLSSGC Trigger: GCAGCCCGAGGACAGTACCCAGGGTGCCTTCCAGCT...GGGCATCTGCCTGGAAGGTGGGACTGTTTCTCCTGGACTCTCTCTAGTCACTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS-3UTR CCA 90 bp | CCTCCTCACCACGATCCACCCTGTGTTTGTACGGAGGAGTCGAGAGATGCCCCGTCGAGGTCTTGGAGCTaGAAGGCACCCTGGGTACTG | + |
Preference number: 4 (lower is better) Translates to: PPHHDPPCVCTEESRDAPSRSWS*KAPWVL Trigger: CAGTACCCAGGGTGCCTTCCAGCTCCAAGACCTCGA...CGGGGCATCTCTCGACTCCTCCGTACAAACACAGGGTGGATCGTGGTGAGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS-3UTR CCA 90 bp | CACAGGAGTAACAGCCAGCCTCCTCACCACGATCCACCCTGTGTTTGTACGGAGTGGCTGGTGAGTGGCTaGAGGGCAGGTCCCGATTCA | + |
Preference number: 4 (lower is better) Translates to: HRSNSQPPHHDPPCVCTEWLVSG*RAGPDS Trigger: TGAATCGGGACCTGCCCTCCAGCCACTCACCAGCCA...CTCCGTACAAACACAGGGTGGATCGTGGTGAGGAGGCTGGCTGTTACTCCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS-3UTR TCA 90 bp | AACAGCCAGCCTCCTCACCACGATCCACCCTGTGTTTGTACGGAGGAGTCGAGAAGCCATCATTCAGGGTaGGGCCAGGAGAGCAGGCTA | + |
Preference number: 4 (lower is better) Translates to: NSQPPHHDPPCVCTEESRSHHSG*GQESRL Trigger: TAGCCTGCTCTCCTGGCCTCACCCTGAATGATGGCT...TCTCGACTCCTCCGTACAAACACAGGGTGGATCGTGGTGAGGAGGCTGGCTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS-3UTR GCA 90 bp | GGACAGACAGACAGTCCAGTGACTAGAGAGAGTCCAGGAGAAACAGTCCCACCTGATTCAGGAGGTCTGTaGCCTGGGGCCTGGGGCTGT | + |
Preference number: 4 (lower is better) Translates to: GQTDSPVTRESPGETVPPDSGGL*PGAWGC Trigger: ACAGCCCCAGGCCCCAGGGCACAGACCTCCTGAATC...AGGTGGGACTGTTTCTCCTGGACTCTCTCTAGTCACTGGACTGTCTGTCTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS-3UTR CCA 90 bp | GGACAGACAGACAGTCCAGTGACTAGAGAGAGTCCAGGAGAAACAGTCCCACCTCATGGTCCGGAACAATaGCTGGTGAGTGGCTGGAGG | + |
Preference number: 4 (lower is better) Translates to: GQTDSPVTRESPGETVPPHGPEQ*LVSGWR Trigger: CCTCCAGCCACTCACCAGCCATTGTTCCGGACCATG...AGGTGGGACTGTTTCTCCTGGACTCTCTCTAGTCACTGGACTGTCTGTCTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS-3UTR TCA 90 bp | TGTCTGCTTAGAGTCCTGGAGCAGGCTGTGAGCAGGTCCATGGAGGCACTGAGCTTCATCTTCCTCTTCTaGAAGAGAGCCACTGTCCAC | + |
Preference number: 4 (lower is better) Translates to: CLLRVLEQAVSRSMEALSFIFLF*KRATVH Trigger: GTGGACAGTGGCTCTCTTTCAGAAGAGGAAGATGAA...GCTCAGTGCCTCCATGGACCTGCTCACAGCCTGCTCCAGGACTCTAAGCAGACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS-3UTR GCA 90 bp | GGACAGACAGACAGTCCAGTGACTAGAGAGAGTCCAGGAGAAACAGTCCCACCTTGGTCCTTGATGCTCTaGACCACCCCCACAAGGGAT | + |
Preference number: 4 (lower is better) Translates to: GQTDSPVTRESPGETVPPWSLML*TTPTRD Trigger: ATCCCTTGTGGGGGTGGTGCAGAGCATCAAGGACCA...AGGTGGGACTGTTTCTCCTGGACTCTCTCTAGTCACTGGACTGTCTGTCTGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS-3UTR GCA 90 bp | AACAGCCAGCCTCCTCACCACGATCCACCCTGTGTTTGTACGGAGGAGTCGAGACAACAGAAATCCATCTaGTTGTCCTTGCCAGCAACA | + |
Preference number: 4 (lower is better) Translates to: NSQPPHHDPPCVCTEESRQQKSI*LSLPAT Trigger: TGTTGCTGGCAAGGACAAGCAGATGGATTTCTGTTG...TCTCGACTCCTCCGTACAAACACAGGGTGGATCGTGGTGAGGAGGCTGGCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS-3UTR CCA 90 bp | CTGGGATTAACACACTACTTTAATGTCACCAGAGAACCCTGTGGGAGAGGGAGGCTGGGGCTGTTTTTGTaGGCACTTGTGAACAGATCT | + |
Preference number: 4 (lower is better) Translates to: LGLTHYFNVTREPCGRGRLGLFL*ALVNRS Trigger: AGATCTGTTCACAAGTGCCCACAAAAACAGCCCCAG...CCTCCCTCTCCCACAGGGTTCTCTGGTGACATTAAAGTAGTGTGTTAATCCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS CCA 90 bp | TCTGAAAGAGAGCCACTGTCCACCGACGGCAGCGAGCCATGCAAGTaGGCCCTGTCATCGAGCCCCTGGGCCCCTGGCAGCCGCTGCCGG | + |
Preference number: 5 (lower is better) Translates to: SEREPLSTDGSEPCK*ALSSSPWAPGSRCR Trigger: CCGGCAGCGGCTGCCAGGGGCCCAGGGGCTCGATGACAGGGCCCACTTGCATGGCTCGCTGCCGTCGGTGGACAGTGGCTCTCTTTCAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS CCA 90 bp | TGTCCTTGCCAGCAACATGGTCCGGAACAATGGCTGGTGAGTGGCTaGAGGGCAGGTCCCGATTCAGGAGGTCTGTGCCCTGGGGCCTGG | + |
Preference number: 5 (lower is better) Translates to: CPCQQHGPEQWLVSG*RAGPDSGGLCPGAW Trigger: CCAGGCCCCAGGGCACAGACCTCCTGAATCGGGACCTGCCCTCCAGCCACTCACCAGCCATTGTTCCGGACCATGTTGCTGGCAAGGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS CCA 90 bp | GGTGAGTGGCTGGAGGGCAGGTCCCGATTCAGGAGGTCTGTGCCCTaGGGCCTGGGGCTGTTTTTGTGGGCACTTGTGAACAGATCTCGC | + |
Preference number: 5 (lower is better) Translates to: GEWLEGRSRFRRSVP*GLGLFLWALVNRSR Trigger: GCGAGATCTGTTCACAAGTGCCCACAAAAACAGCCCCAGGCCCCAGGGCACAGACCTCCTGAATCGGGACCTGCCCTCCAGCCACTCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS TCA 90 bp | CATCTGCTTGTCCTTGCCAGCAACATGGTCCGGAACAATGGCTGGTaGGTGGCTGGAGGGCAGGTCCCGATTCAGGAGGTCTGTGCCCTG | + |
Preference number: 5 (lower is better) Translates to: HLLVLASNMVRNNGW*VAGGQVPIQEVCAL Trigger: CAGGGCACAGACCTCCTGAATCGGGACCTGCCCTCCAGCCACTCACCAGCCATTGTTCCGGACCATGTTGCTGGCAAGGACAAGCAGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS-3UTR CAA 90 bp | GGAGCAGGCTGTGAGCAGGTCCATGGAGGCACTGAGCGGTGCACAGGAGTAACATCCATCTGCTTGTCCTaGCCAGCAACATGGTCCGGA | + |
Preference number: 5 (lower is better) Translates to: GAGCEQVHGGTERCTGVTSICLS*PATWSG Trigger: TCCGGACCATGTTGCTGGCAAGGACAAGCAGATGGA...TGTTACTCCTGTGCACCGCTCAGTGCCTCCATGGACCTGCTCACAGCCTGCTCC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS-3UTR CAA 90 bp | GGATTAACACACTACTTTAATGTCACCAGAGAACCCTGTGGGAGAGGGAGGGGGGGCCTGGGGCTGTTTTaGTGGGCACTTGTGAACAGA | + |
Preference number: 5 (lower is better) Translates to: GLTHYFNVTREPCGRGRGGLGLF*WALVNR Trigger: TCTGTTCACAAGTGCCCACAAAAACAGCCCCAGGCC...CCCCCTCCCTCTCCCACAGGGTTCTCTGGTGACATTAAAGTAGTGTGTTAATCC 53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS CCA 72 bp | AGCGAGCCATGCAAGTGGGCCCTGTCATCGAGCCCCTaGGCCCCTGGCAGCCGCTGCCGGTGGTGCTGCTGG | + |
Preference number: 6 (lower is better) Translates to: SEPCKWALSSSP*APGSRCRWCCW Trigger: CCAGCAGCACCACCGGCAGCGGCTGCCAGGGGCCCAGGGGCTCGATGACAGGGCCCACTTGCATGGCTCGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS CCA 72 bp | GAGCCACTGTCCACCGACGGCAGCGAGCCATGCAAGTaGGCCCTGTCATCGAGCCCCTGGGCCCCTGGCAGC | + |
Preference number: 6 (lower is better) Translates to: EPLSTDGSEPCK*ALSSSPWAPGS Trigger: GCTGCCAGGGGCCCAGGGGCTCGATGACAGGGCCCACTTGCATGGCTCGCTGCCGTCGGTGGACAGTGGCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS TCA 72 bp | GTCCTTGCCAGCAACATGGTCCGGAACAATGGCTGGTaGGTGGCTGGAGGGCAGGTCCCGATTCAGGAGGTC | + |
Preference number: 6 (lower is better) Translates to: VLASNMVRNNGW*VAGGQVPIQEV Trigger: GACCTCCTGAATCGGGACCTGCCCTCCAGCCACTCACCAGCCATTGTTCCGGACCATGTTGCTGGCAAGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS CCA 72 bp | CAGCAACATGGTCCGGAACAATGGCTGGTGAGTGGCTaGAGGGCAGGTCCCGATTCAGGAGGTCTGTGCCCT | + |
Preference number: 6 (lower is better) Translates to: QQHGPEQWLVSG*RAGPDSGGLCP Trigger: AGGGCACAGACCTCCTGAATCGGGACCTGCCCTCCAGCCACTCACCAGCCATTGTTCCGGACCATGTTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |
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CDS CCA 72 bp | TCTGCTTGTCCTTGCCAGCAACATGGTCCGGAACAATaGCTGGTGAGTGGCTGGAGGGCAGGTCCCGATTCA | + |
Preference number: 6 (lower is better) Translates to: SACPCQQHGPEQ*LVSGWRAGPDS Trigger: TGAATCGGGACCTGCCCTCCAGCCACTCACCAGCCATTGTTCCGGACCATGTTGCTGGCAAGGACAAGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006380.5 |