Pregenerated sensors for FAM131A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050821Ensembl transcript IDs: ENSMUST00000056518.13, ENSMUST00000118919.9, ENSMUST00000128273.2, ENSMUST00000149543.9, ENSMUST00000232207.2
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGCCCTCTGAAAGCTTCAGAGCCCACATTTGGCCACAGAGGCTCTaGCCCAGGCAGCAGCCTGGGGAGACACGCCCCCACCGGGCATGT | + |
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Preference number: 1 (lower is better) Translates to: KPSESFRAHIWPQRL*PRQQPGETRPHRAC Trigger: ACATGCCCGGTGGGGGCGTGTCTCCCCAGGCTGCTGCCTGGGGCAGAGCCTCTGTGGCCAAATGTGGGCTCTGAAGCTTTCAGAGGGCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR CCA 90 bp | CACTTACCAACCCCAGTGTCCTCGCAATCTGCCAGCGGCCTCCACTaGCTGATCAGCAACGCCCTGCCTGGGACAGGGCCCCCTATCACT | + |
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Preference number: 1 (lower is better) Translates to: HLPTPVSSQSASGLH*LISNALPGTGPPIT Trigger: AGTGATAGGGGGCCCTGTCCCAGGCAGGGCGTTGCTGATCAGCCAGTGGAGGCCGCTGGCAGATTGCGAGGACACTGGGGTTGGTAAGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR CCA 90 bp | CTGCATGTGCTCGCACAACCTTGCCATGCTGGGAAAGGGCCAGGGTaGAGGAGCAGCGAAGGGGGCAAGGGCACACTCTTTCATCTTTTC | + |
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Preference number: 1 (lower is better) Translates to: LHVLAQPCHAGKGPG*RSSEGGKGTLFHLF Trigger: GAAAAGATGAAAGAGTGTGCCCTTGCCCCCTTCGCTGCTCCTCCACCCTGGCCCTTTCCCAGCATGGCAAGGTTGTGCGAGCACATGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR GCA 90 bp | AGAGCCCTTACTTTTTCCAGTTCCGCCCTACTGAGTCTCTGCATGTaGTCGCACAACCTTGCCATGCTGGGAAAGGGCCAGGGTGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: RALTFSSSALLSLCM*SHNLAMLGKGQGGG Trigger: TCCTCCACCCTGGCCCTTTCCCAGCATGGCAAGGTTGTGCGAGCACATGCAGAGACTCAGTAGGGCGGAACTGGAAAAAGTAAGGGCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR CCA 90 bp | CAGCCCAGCCACAACCCTCTCAGGTTCACATCCCAGGAGGAAATGTaGCATTTTGGATTCAAGAAACATGAACGTCACTGTCTGCCACAG | + |
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Preference number: 1 (lower is better) Translates to: QPSHNPLRFTSQEEM*HFGFKKHERHCLPQ Trigger: CTGTGGCAGACAGTGACGTTCATGTTTCTTGAATCCAAAATGCCACATTTCCTCCTGGGATGTGAACCTGAGAGGGTTGTGGCTGGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR GCA 90 bp | TCCTCTCCAAACACTTTCATGCAAAACACACAATGGAGAAGTGAGTaGTCCCAGAAGCCCTCTGAAAGCTTCAGAGCCCACATTTGGCCA | + |
|
Preference number: 1 (lower is better) Translates to: SSPNTFMQNTQWRSE*SQKPSESFRAHIWP Trigger: TGGCCAAATGTGGGCTCTGAAGCTTTCAGAGGGCTTCTGGGAGCACTCACTTCTCCATTGTGTGTTTTGCATGAAAGTGTTTGGAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGCCAGCCCCACAGGTGGTGGTTCAGTCACGCACTGCACATGGACTCGGATGAGTGGAAGCAGGACATaGGCCCCTAGCCTGGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: GASPTGGGSVTHCTWTRMSGSRT*APSLAP Trigger: AGGGGCCAGGCTAGGGGCGCATGTCCTGCTTCCACT...CATCCGAGTCCATGTGCAGTGCGTGACTGAACCACCACCTGTGGGGCTGGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR CCA 90 bp | TCGCAATCTGCCAGCGGCCTCCACTGGCTGATCAGCAACGCCCTGCCTGGGACAACAACCTTGCCATGCTaGGAAAGGGCCAGGGTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SQSASGLHWLISNALPGTTTLPC*ERARVE Trigger: CTCCACCCTGGCCCTTTCCCAGCATGGCAAGGTTGT...TGTCCCAGGCAGGGCGTTGCTGATCAGCCAGTGGAGGCCGCTGGCAGATTGCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR CCA 90 bp | GGACAGCTACTCCCTCATGACTGTCCATTCATTGGCACAAATCTGGCTCCCCGGGGGAAAGGGCCAGGGTaGAGGAGCAGCGAAGGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: GQLLPHDCPFIGTNLAPRGKGPG*RSSEGG Trigger: GCCCCCTTCGCTGCTCCTCCACCCTGGCCCTTTCCC...CCGGGGAGCCAGATTTGTGCCAATGAATGGACAGTCATGAGGGAGTAGCTGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTGGGCAAAGGGGACCCTTAGGGGATGGCTCAATCTGTAGACTCCAGGAGGGCAAACCCCATGAGTaGAAGCAGGACATGCGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: PAGQRGPLGDGSICRLQEGKPHE*KQDMRP Trigger: GGGGCGCATGTCCTGCTTCCACTCATGGGGTTTGCC...CTCCTGGAGTCTACAGATTGAGCCATCCCCTAAGGGTCCCCTTTGCCCAGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR TCA 90 bp | GGACAGCTACTCCCTCATGACTGTCCATTCATTGGCACAAATCTGGCTCCCCGGCCAGTTCCGCCCTACTaGGTCTCTGCATGTGCTCGC | + |
|
Preference number: 2 (lower is better) Translates to: GQLLPHDCPFIGTNLAPRPVPPY*VSACAR Trigger: GCGAGCACATGCAGAGACTCAGTAGGGCGGAACTGG...CCGGGGAGCCAGATTTGTGCCAATGAATGGACAGTCATGAGGGAGTAGCTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR GCA 90 bp | TTCAGTCACGCACTGCACATGGACTCGGATGAAGAGAAAAGCAGAGGAGAGGGGAGTGGAAGCAGGACATaGGCCCCTAGCCTGGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: FSHALHMDSDEEKSRGEGSGSRT*APSLAP Trigger: AGGGGCCAGGCTAGGGGCGCATGTCCTGCTTCCACT...CCCCTCTCCTCTGCTTTTCTCTTCATCCGAGTCCATGTGCAGTGCGTGACTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR TCA 90 bp | TCCTCAGCCCAGCCACAACCCTCTCAGGTTCACATCCCAGGAGGAAATGTGGCACTCCCAGAAGCCCTCTaGAAGCTTCAGAGCCCACAT | + |
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Preference number: 2 (lower is better) Translates to: SSAQPQPSQVHIPGGNVALPEAL*KLQSPH Trigger: ATGTGGGCTCTGAAGCTTTCAGAGGGCTTCTGGGAG...TGCCACATTTCCTCCTGGGATGTGAACCTGAGAGGGTTGTGGCTGGGCTGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR TCA 90 bp | AAGCCTCTGAGATTCATTCTGCTGCCACTTACCAACCCCAGTGTCCTCGCAATCGACACAATGGAGGGGTaGAGCACAGCAGAGCCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: KPLRFILLPLTNPSVLAIDTMEG*STAEPS Trigger: GCTGGGCTCTGCTGTGCTTCACCCCTCCATTGTGTC...GATTGCGAGGACACTGGGGTTGGTAAGTGGCAGCAGAATGAATCTCAGAGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR GCA 90 bp | CTACAGCCTTCCATTCAGCCAAGAAAAGCACTACCCTCTTTCCTCCCCCAAGGACGCACAACCTTGCCATaGTGGGAAAGGGCCAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LQPSIQPRKALPSFLPQGRTTLP*WERARV Trigger: CACCCTGGCCCTTTCCCAGCATGGCAAGGTTGTGCG...TCCTTGGGGGAGGAAAGAGGGTAGTGCTTTTCTTGGCTGAATGGAAGGCTGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR GCA 90 bp | AAGCCTCTGAGATTCATTCTGCTGCCACTTACCAACCCCAGTGTCCTCGCAATCCGCACAACCTTGCCATaGTGGGAAAGGGCCAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: KPLRFILLPLTNPSVLAIRTTLP*WERARV Trigger: CACCCTGGCCCTTTCCCAGCATGGCAAGGTTGTGCG...GATTGCGAGGACACTGGGGTTGGTAAGTGGCAGCAGAATGAATCTCAGAGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR CCA 90 bp | CGAAGGGGGCAAGGGCACACTCTTTCATCTTTTCCAGTGCCTCCCAAAGAAGATGGCAAACCCCATGAGTaGAAGCAGGACATGCGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: RRGQGHTLSSFPVPPKEDGKPHE*KQDMRP Trigger: GGGGCGCATGTCCTGCTTCCACTCATGGGGTTTGCC...ATCTTCTTTGGGAGGCACTGGAAAAGATGAAAGAGTGTGCCCTTGCCCCCTTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR CCA 90 bp | GTTGGCTCATATTTTCACCTTGGATCCTCTTACCTGTTGCCCAAGCCTCTGAGACAGCAACGCCCTGCCTaGGACAGGGCCCCCTATCAC | + |
|
Preference number: 2 (lower is better) Translates to: VGSYFHLGSSYLLPKPLRQQRPA*DRAPYH Trigger: GTGATAGGGGGCCCTGTCCCAGGCAGGGCGTTGCTG...TCTCAGAGGCTTGGGCAACAGGTAAGAGGATCCAAGGTGAAAATATGAGCCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGTGGTTCAGTCACGCACTGCACATGGACTCGGATGAAGAGAAAAGCAGATTCAGAGCCCACATTTaGCCACAGAGGCTCTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: RWWFSHALHMDSDEEKSRFRAHI*PQRLCP Trigger: GGGGCAGAGCCTCTGTGGCCAAATGTGGGCTCTGAA...TCTGCTTTTCTCTTCATCCGAGTCCATGTGCAGTGCGTGACTGAACCACCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR CCA 90 bp | GTTGGCTCATATTTTCACCTTGGATCCTCTTACCTGTTGCCCAAGCCTCTGAGAACAGCAGAGCCCAGCTaGGCAAAGGGGACCCTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: VGSYFHLGSSYLLPKPLRTAEPS*AKGTLR Trigger: CCTAAGGGTCCCCTTTGCCCAGCTGGGCTCTGCTGT...TCTCAGAGGCTTGGGCAACAGGTAAGAGGATCCAAGGTGAAAATATGAGCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR GCA 90 bp | GTGGCTACAGCCTTCCATTCAGCCAAGAAAAGCACTACCCTCTTTCCTCCCCCACAATGGAGAAGTGAGTaGTCCCAGAAGCCCTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: VATAFHSAKKSTTLFPPPQWRSE*SQKPSE Trigger: TTCAGAGGGCTTCTGGGAGCACTCACTTCTCCATTG...TGGGGGAGGAAAGAGGGTAGTGCTTTTCTTGGCTGAATGGAAGGCTGTAGCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR GCA 90 bp | CTACAGCCTTCCATTCAGCCAAGAAAAGCACTACCCTCTTTCCTCCCCCAAGGACTGAGTCTCTGCATGTaGTCGCACAACCTTGCCATG | + |
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Preference number: 2 (lower is better) Translates to: LQPSIQPRKALPSFLPQGLSLCM*SHNLAM Trigger: CATGGCAAGGTTGTGCGAGCACATGCAGAGACTCAG...TCCTTGGGGGAGGAAAGAGGGTAGTGCTTTTCTTGGCTGAATGGAAGGCTGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTTGGCTCATATTTTCACCTTGGATCCTCTTACCTGTTGCCCAAGCCTCTTTCAGAGCCCACATTTaGCCACAGAGGCTCTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: CCWLIFSPWILLPVAQASFRAHI*PQRLCP Trigger: GGGGCAGAGCCTCTGTGGCCAAATGTGGGCTCTGAA...AGAGGCTTGGGCAACAGGTAAGAGGATCCAAGGTGAAAATATGAGCCAACAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR GCA 90 bp | AAGCCTCTGAGATTCATTCTGCTGCCACTTACCAACCCCAGTGTCCTCGCAATCCAATGGAGAAGTGAGTaGTCCCAGAAGCCCTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: KPLRFILLPLTNPSVLAIQWRSE*SQKPSE Trigger: TTCAGAGGGCTTCTGGGAGCACTCACTTCTCCATTG...GATTGCGAGGACACTGGGGTTGGTAAGTGGCAGCAGAATGAATCTCAGAGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR CAA 90 bp | GCCACAACCCTCTCAGGTTCACATCCCAGGAGGAAATGTGGCATTTaGGATTCAAGAAACATGAACGTCACTGTCTGCCACAGCTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: ATTLSGSHPRRKCGI*DSRNMNVTVCHSCS Trigger: GCTACAGCTGTGGCAGACAGTGACGTTCATGTTTCTTGAATCCAAAATGCCACATTTCCTCCTGGGATGTGAACCTGAGAGGGTTGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR GCA 90 bp | GTTGGCTCATATTTTCACCTTGGATCCTCTTACCTGTTGCCCAAGCCTCTGAGAATGAACGTCACTGTCTaGCACAGCTGTAGCCATGCC | + |
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Preference number: 2 (lower is better) Translates to: VGSYFHLGSSYLLPKPLRMNVTV*HSCSHA Trigger: GGCATGGCTACAGCTGTGGCAGACAGTGACGTTCAT...TCTCAGAGGCTTGGGCAACAGGTAAGAGGATCCAAGGTGAAAATATGAGCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR GCA 90 bp | TGCTGTTGGCTCATATTTTCACCTTGGATCCTCTTACCTGTTGCCCAAGCCTCTCTGAGTCTCTGCATGTaGTCGCACAACCTTGCCATG | + |
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Preference number: 2 (lower is better) Translates to: CCWLIFSPWILLPVAQASLSLCM*SHNLAM Trigger: CATGGCAAGGTTGTGCGAGCACATGCAGAGACTCAG...AGAGGCTTGGGCAACAGGTAAGAGGATCCAAGGTGAAAATATGAGCCAACAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR TCA 90 bp | CTACAGCCTTCCATTCAGCCAAGAAAAGCACTACCCTCTTTCCTCCCCCAAGGATGGATTCAAGAAACATaGACGTCACTGTCTGCCACA | + |
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Preference number: 2 (lower is better) Translates to: LQPSIQPRKALPSFLPQGWIQET*TSLSAT Trigger: TGTGGCAGACAGTGACGTTCATGTTTCTTGAATCCA...TCCTTGGGGGAGGAAAGAGGGTAGTGCTTTTCTTGGCTGAATGGAAGGCTGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR TCA 90 bp | AAGCCTCTGAGATTCATTCTGCTGCCACTTACCAACCCCAGTGTCCTCGCAATCTGGATTCAAGAAACATaGACGTCACTGTCTGCCACA | + |
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Preference number: 2 (lower is better) Translates to: KPLRFILLPLTNPSVLAIWIQET*TSLSAT Trigger: TGTGGCAGACAGTGACGTTCATGTTTCTTGAATCCA...GATTGCGAGGACACTGGGGTTGGTAAGTGGCAGCAGAATGAATCTCAGAGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTTGGCTCATATTTTCACCTTGGATCCTCTTACCTGTTGCCCAAGCCTCTGTCACGCACTGCACATaGACTCGGATGAAGAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: CCWLIFSPWILLPVAQASVTHCT*TRMKRK Trigger: TTTTCTCTTCATCCGAGTCCATGTGCAGTGCGTGAC...AGAGGCTTGGGCAACAGGTAAGAGGATCCAAGGTGAAAATATGAGCCAACAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR GCA 90 bp | TGCTGTTGGCTCATATTTTCACCTTGGATCCTCTTACCTGTTGCCCAAGCCTCTTTTCATCTTTTCCAGTaGCTCCCAAAGAAGATCGGC | + |
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Preference number: 2 (lower is better) Translates to: CCWLIFSPWILLPVAQASFHLFQ*LPKKIG Trigger: GCCGATCTTCTTTGGGAGGCACTGGAAAAGATGAAA...AGAGGCTTGGGCAACAGGTAAGAGGATCCAAGGTGAAAATATGAGCCAACAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR CCA 72 bp | ACCCCAGTGTCCTCGCAATCTGCCAGCGGCCTCCACTaGCTGATCAGCAACGCCCTGCCTGGGACAGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: TPVSSQSASGLH*LISNALPGTGP Trigger: GGGCCCTGTCCCAGGCAGGGCGTTGCTGATCAGCCAGTGGAGGCCGCTGGCAGATTGCGAGGACACTGGGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR CCA 72 bp | CAGCGGCCTCCACTGGCTGATCAGCAACGCCCTGCCTaGGACAGGGCCCCCTATCACTGTGGCTACAGCCTT | + |
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Preference number: 3 (lower is better) Translates to: QRPPLADQQRPA*DRAPYHCGYSL Trigger: AAGGCTGTAGCCACAGTGATAGGGGGCCCTGTCCCAGGCAGGGCGTTGCTGATCAGCCAGTGGAGGCCGCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR GCA 72 bp | CGCCCTACTGAGTCTCTGCATGTGCTCGCACAACCTTaGCATGCTGGGAAAGGGCCAGGGTGGAGGAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: RPTESLHVLAQP*HAGKGPGWRSS Trigger: GCTGCTCCTCCACCCTGGCCCTTTCCCAGCATGGCAAGGTTGTGCGAGCACATGCAGAGACTCAGTAGGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR CCA 72 bp | CTCGCACAACCTTGCCATGCTGGGAAAGGGCCAGGGTaGAGGAGCAGCGAAGGGGGCAAGGGCACACTCTTT | + |
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Preference number: 3 (lower is better) Translates to: LAQPCHAGKGPG*RSSEGGKGTLF Trigger: AAAGAGTGTGCCCTTGCCCCCTTCGCTGCTCCTCCACCCTGGCCCTTTCCCAGCATGGCAAGGTTGTGCGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR CAA 90 bp | AGGCCCTCCCAGCTCTGTAACAAGCAGAGCCCTTACTTTTTCCAGTTCCGCCCTCTTCAGAGCCCACATTaGGCCACAGAGGCTCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: RPSQLCNKQSPYFFQFRPLQSPH*ATEALP Trigger: GGGCAGAGCCTCTGTGGCCAAATGTGGGCTCTGAAG...AGGGCGGAACTGGAAAAAGTAAGGGCTCTGCTTGTTACAGAGCTGGGAGGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR GCA 72 bp | GGAGCCAGCCCCACAGGTGGTGGTTCAGTCACGCACTaGACATGGACTCGGATGAAGAGAAAAGCAGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: GASPTGGGSVTH*TWTRMKRKAEE Trigger: CTCCTCTGCTTTTCTCTTCATCCGAGTCCATGTGCAGTGCGTGACTGAACCACCACCTGTGGGGCTGGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR CCA 72 bp | GCAACGCCCTGCCTGGGACAGGGCCCCCTATCACTGTaGCTACAGCCTTCCATTCAGCCAAGAAAAGCACTA | + |
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Preference number: 3 (lower is better) Translates to: ATPCLGQGPLSL*LQPSIQPRKAL Trigger: TAGTGCTTTTCTTGGCTGAATGGAAGGCTGTAGCCACAGTGATAGGGGGCCCTGTCCCAGGCAGGGCGTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR GCA 72 bp | ACTTTTTCCAGTTCCGCCCTACTGAGTCTCTGCATGTaGTCGCACAACCTTGCCATGCTGGGAAAGGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: TFSSSALLSLCM*SHNLAMLGKGQ Trigger: CTGGCCCTTTCCCAGCATGGCAAGGTTGTGCGAGCACATGCAGAGACTCAGTAGGGCGGAACTGGAAAAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR CAA 90 bp | GTTGGCTCATATTTTCACCTTGGATCCTCTTACCTGTTGCCCAAGCCTCTGAGACTTCAGAGCCCACATTaGGCCACAGAGGCTCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: VGSYFHLGSSYLLPKPLRLQSPH*ATEALP Trigger: GGGCAGAGCCTCTGTGGCCAAATGTGGGCTCTGAAG...TCTCAGAGGCTTGGGCAACAGGTAAGAGGATCCAAGGTGAAAATATGAGCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR CAA 90 bp | GGAGCCAGCCCCACAGGTGGTGGTTCAGTCACGCACTGCACATGGACTCGGATGAGGAAATGTGGCATTTaGGATTCAAGAAACATGAAC | + |
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Preference number: 3 (lower is better) Translates to: GASPTGGGSVTHCTWTRMRKCGI*DSRNMN Trigger: GTTCATGTTTCTTGAATCCAAAATGCCACATTTCCT...CATCCGAGTCCATGTGCAGTGCGTGACTGAACCACCACCTGTGGGGCTGGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR-3UTR CAA 90 bp | CCAGCTGGGCAAAGGGGACCCTTAGGGGATGGCTCAATCTGTAGACTCCAGGAGAGGAAATGTGGCATTTaGGATTCAAGAAACATGAAC | + |
|
Preference number: 3 (lower is better) Translates to: PAGQRGPLGDGSICRLQERKCGI*DSRNMN Trigger: GTTCATGTTTCTTGAATCCAAAATGCCACATTTCCT...CTCCTGGAGTCTACAGATTGAGCCATCCCCTAAGGGTCCCCTTTGCCCAGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| 3UTR GCA 72 bp | AACACTTTCATGCAAAACACACAATGGAGAAGTGAGTaGTCCCAGAAGCCCTCTGAAAGCTTCAGAGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: NTFMQNTQWRSE*SQKPSESFRAH Trigger: GTGGGCTCTGAAGCTTTCAGAGGGCTTCTGGGAGCACTCACTTCTCCATTGTGTGTTTTGCATGAAAGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| CDS-3UTR CCA 90 bp | TCGCAATCTGCCAGCGGCCTCCACTGGCTGATCAGCAACGCCCTGCCTGGGACAGAGCTCTCCGGGACTTaGGCAGCATCGCGACTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SQSASGLHWLISNALPGTELSGT*AASRLC Trigger: ACACAGTCGCGATGCTGCCCAAGTCCCGGAGAGCTC...TGTCCCAGGCAGGGCGTTGCTGATCAGCCAGTGGAGGCCGCTGGCAGATTGCGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056518.13 |
||
| CDS-3UTR CCA 90 bp | GGAGCCAGCCCCACAGGTGGTGGTTCAGTCACGCACTGCACATGGACTCGGATGCCTGGGCCATGGCTGTaGGCTTGGTCACGTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GASPTGGGSVTHCTWTRMPGPWL*AWSRGP Trigger: AGGACCACGTGACCAAGCCCACAGCCATGGCCCAGG...CATCCGAGTCCATGTGCAGTGCGTGACTGAACCACCACCTGTGGGGCTGGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR GCA 90 bp | TCGCAATCTGCCAGCGGCCTCCACTGGCTGATCAGCAACGCCCTGCCTGGGACACCGGAGCTTGGCTTCTaGAATAGCAAACTGCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQSASGLHWLISNALPGTPELGF*NSKLLG Trigger: GCCGAGCAGTTTGCTATTGCAGAAGCCAAGCTCCGG...TGTCCCAGGCAGGGCGTTGCTGATCAGCCAGTGGAGGCCGCTGGCAGATTGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR CCA 90 bp | TCGCAATCTGCCAGCGGCCTCCACTGGCTGATCAGCAACGCCCTGCCTGGGACAAGTGCAGCGATCTCCTaGATGGTTAGAGCTCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SQSASGLHWLISNALPGTSAAIS*MVRALR Trigger: CCGGAGAGCTCTAACCATCCAGGAGATCGCTGCACT...TGTCCCAGGCAGGGCGTTGCTGATCAGCCAGTGGAGGCCGCTGGCAGATTGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCAGCCCAGCCACAACCCTCTCAGGTTCACATCCCAGGAGGAAATGTGGCACCAAAGGACCCAGGCTaGGGAAGGCACTTTCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSAQPQPSQVHIPGGNVAPKDPG*GRHFPG Trigger: GCCGGGAAAGTGCCTTCCGCAGCCTGGGTCCTTTGG...TGCCACATTTCCTCCTGGGATGTGAACCTGAGAGGGTTGTGGCTGGGCTGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR CCA 90 bp | GGACAGCTACTCCCTCATGACTGTCCATTCATTGGCACAAATCTGGCTCCCCGGCCTGTGAAGAGGTCCTaGAGGTGGGACCCCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQLLPHDCPFIGTNLAPRPVKRS*RWDPRG Trigger: GCCTCTGGGGTCCCACCTCCAGGACCTCTTCACAGG...CCGGGGAGCCAGATTTGTGCCAATGAATGGACAGTCATGAGGGAGTAGCTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCAGCCCAGCCACAACCCTCTCAGGTTCACATCCCAGGAGGAAATGTGGCAGGACGATCTGGCCAGTaGAGCGATCTCCTGGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSAQPQPSQVHIPGGNVAGRSGQ*SDLLDG Trigger: ACCATCCAGGAGATCGCTGCACTGGCCAGATCGTCC...TGCCACATTTCCTCCTGGGATGTGAACCTGAGAGGGTTGTGGCTGGGCTGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCTGGGCAAAGGGGACCCTTAGGGGATGGCTCAATCTGTAGACTCCAGGAGCAGCGATCTCCTGGATaGTTAGAGCTCTCCGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PAGQRGPLGDGSICRLQEQRSPG*LELSGT Trigger: AGTCCCGGAGAGCTCTAACCATCCAGGAGATCGCTG...CTCCTGGAGTCTACAGATTGAGCCATCCCCTAAGGGTCCCCTTTGCCCAGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCTGGGCAAAGGGGACCCTTAGGGGATGGCTCAATCTGTAGACTCCAGGAGAGTGCAGCGATCTCCTaGATGGTTAGAGCTCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PAGQRGPLGDGSICRLQESAAIS*MVRALR Trigger: CCGGAGAGCTCTAACCATCCAGGAGATCGCTGCACT...CTCCTGGAGTCTACAGATTGAGCCATCCCCTAAGGGTCCCCTTTGCCCAGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR CCA 90 bp | GGAGCCAGCCCCACAGGTGGTGGTTCAGTCACGCACTGCACATGGACTCGGATGTGGTCCTTCACTACCTaGGAAATACCATGCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GASPTGGGSVTHCTWTRMWSFTT*EIPCRD Trigger: GTCCCTGCATGGTATTTCCCAGGTAGTGAAGGACCA...CATCCGAGTCCATGTGCAGTGCGTGACTGAACCACCACCTGTGGGGCTGGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGCCACAACCCTCTCAGGTTCACATCCCAGGAGGAAATGTGGCATTTTGGACCTGTGAAGAGGTCCTaGAGGTGGGACCCCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSHNPLRFTSQEEMWHFGPVKRS*RWDPRG Trigger: GCCTCTGGGGTCCCACCTCCAGGACCTCTTCACAGG...TCCAAAATGCCACATTTCCTCCTGGGATGTGAACCTGAGAGGGTTGTGGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGCCACAACCCTCTCAGGTTCACATCCCAGGAGGAAATGTGGCATTTTGGATTTCCCAGCTGCCTGTaGGCAGCGGGCAGAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSHNPLRFTSQEEMWHFGFPSCL*AAGRAA Trigger: AGCTGCTCTGCCCGCTGCCCACAGGCAGCTGGGAAA...TCCAAAATGCCACATTTCCTCCTGGGATGTGAACCTGAGAGGGTTGTGGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR GCA 90 bp | AGGCCCTCCCAGCTCTGTAACAAGCAGAGCCCTTACTTTTTCCAGTTCCGCCCTCTCGGCCACTCCTGCTaGAAAGCGAGCCTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RPSQLCNKQSPYFFQFRPLGHSC*KASLLF Trigger: GAACAAGAGGCTCGCTTTGCAGCAGGAGTGGCCGAG...AGGGCGGAACTGGAAAAAGTAAGGGCTCTGCTTGTTACAGAGCTGGGAGGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR GCA 90 bp | CTACAGCCTTCCATTCAGCCAAGAAAAGCACTACCCTCTTTCCTCCCCCAAGGACCAAAGGACCCAGGCTaGGGAAGGCACTTTCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQPSIQPRKALPSFLPQGPKDPG*GRHFPG Trigger: GCCGGGAAAGTGCCTTCCGCAGCCTGGGTCCTTTGG...TCCTTGGGGGAGGAAAGAGGGTAGTGCTTTTCTTGGCTGAATGGAAGGCTGTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR CCA 90 bp | AAGCCTCTGAGATTCATTCTGCTGCCACTTACCAACCCCAGTGTCCTCGCAATCCCTGGGCCATGGCTGTaGGCTTGGTCACGTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KPLRFILLPLTNPSVLAIPGPWL*AWSRGP Trigger: AGGACCACGTGACCAAGCCCACAGCCATGGCCCAGG...GATTGCGAGGACACTGGGGTTGGTAAGTGGCAGCAGAATGAATCTCAGAGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| 3UTR CAA 72 bp | CCCAAGGACAGCTACTCCCTCATGACTGTCCATTCATaGGCACAAATCTGGCTCCCCGGGTTGCCCCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PKDSYSLMTVHS*AQIWLPGLPPC Trigger: ACAAGGGGGCAACCCGGGGAGCCAGATTTGTGCCAATGAATGGACAGTCATGAGGGAGTAGCTGTCCTTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR TCA 90 bp | TTCAGTCACGCACTGCACATGGACTCGGATGAAGAGAAAAGCAGAGGAGAGGGGTTCCATTCAATAAGGTaGGCCACACGGCCCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSHALHMDSDEEKSRGEGFHSIR*ATRPWA Trigger: GGCCCAGGGCCGTGTGGCTCACCTTATTGAATGGAA...CCCCTCTCCTCTGCTTTTCTCTTCATCCGAGTCCATGTGCAGTGCGTGACTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR TCA 90 bp | GTGGCTACAGCCTTCCATTCAGCCAAGAAAAGCACTACCCTCTTTCCTCCCCCATTCCAGAGCAGCCGGTaGGTCACTAGGCTTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VATAFHSAKKSTTLFPPPFQSSR*VTRLAP Trigger: TGGAGCAAGCCTAGTGACTCACCGGCTGCTCTGGAA...TGGGGGAGGAAAGAGGGTAGTGCTTTTCTTGGCTGAATGGAAGGCTGTAGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR TCA 90 bp | CGAAGGGGGCAAGGGCACACTCTTTCATCTTTTCCAGTGCCTCCCAAAGAAGATTTCCATTCAATAAGGTaGGCCACACGGCCCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRGQGHTLSSFPVPPKEDFHSIR*ATRPWA Trigger: GGCCCAGGGCCGTGTGGCTCACCTTATTGAATGGAA...ATCTTCTTTGGGAGGCACTGGAAAAGATGAAAGAGTGTGCCCTTGCCCCCTTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR TCA 90 bp | AGGTGGTGGTTCAGTCACGCACTGCACATGGACTCGGATGAAGAGAAAAGCAGATTCCAGAGCAGCCGGTaGGTCACTAGGCTTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RWWFSHALHMDSDEEKSRFQSSR*VTRLAP Trigger: TGGAGCAAGCCTAGTGACTCACCGGCTGCTCTGGAA...TCTGCTTTTCTCTTCATCCGAGTCCATGTGCAGTGCGTGACTGAACCACCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR TCA 90 bp | CCAGCTGGGCAAAGGGGACCCTTAGGGGATGGCTCAATCTGTAGACTCCAGGAGCTTGTTCACCCTCACTaGGGTCTGAATAGGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PAGQRGPLGDGSICRLQELVHPH*GLNRRK Trigger: TTTCCTCCTATTCAGACCTCAGTGAGGGTGAACAAG...CTCCTGGAGTCTACAGATTGAGCCATCCCCTAAGGGTCCCCTTTGCCCAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR TCA 90 bp | GTGGCTACAGCCTTCCATTCAGCCAAGAAAAGCACTACCCTCTTTCCTCCCCCAGTCATCACCATCCACTaGAGACCATGCCCGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VATAFHSAKKSTTLFPPPVITIH*RPCPEL Trigger: AAGCTCCGGGCATGGTCTTCAGTGGATGGTGATGAC...TGGGGGAGGAAAGAGGGTAGTGCTTTTCTTGGCTGAATGGAAGGCTGTAGCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR GCA 90 bp | CTACAGCCTTCCATTCAGCCAAGAAAAGCACTACCCTCTTTCCTCCCCCAAGGACCAGGCCCTTCGCGCTaGCACAGAAACATTTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LQPSIQPRKALPSFLPQGPGPSR*HRNILP Trigger: GGGCAAAATGTTTCTGTGGCAGCGCGAAGGGCCTGG...TCCTTGGGGGAGGAAAGAGGGTAGTGCTTTTCTTGGCTGAATGGAAGGCTGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056518.13 |
||
| CDS-3UTR GCA 90 bp | GTGGCTACAGCCTTCCATTCAGCCAAGAAAAGCACTACCCTCTTTCCTCCCCCAGGTCCGAAGCCACTCTaGGACTTGTCTGACAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VATAFHSAKKSTTLFPPPGPKPL*DLSDKS Trigger: GGACTTGTCAGACAAGTCGCAGAGTGGCTTCGGACC...TGGGGGAGGAAAGAGGGTAGTGCTTTTCTTGGCTGAATGGAAGGCTGTAGCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056518.13 |
||
| CDS-3UTR GCA 90 bp | CCCAGCCACAACCCTCTCAGGTTCACATCCCAGGAGGAAATGTGGCATTTTGGACCGGAGCTTGGCTTCTaGAATAGCAAACTGCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSHNPLRFTSQEEMWHFGPELGF*NSKLLG Trigger: GCCGAGCAGTTTGCTATTGCAGAAGCCAAGCTCCGG...TCCAAAATGCCACATTTCCTCCTGGGATGTGAACCTGAGAGGGTTGTGGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGCCACAACCCTCTCAGGTTCACATCCCAGGAGGAAATGTGGCATTTTGGAACCTCTGGCAAGTCCTaGCTGTCCACGGAAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSHNPLRFTSQEEMWHFGTSGKS*LSTEEG Trigger: TCCTTCTTCCGTGGACAGCCAGGACTTGCCAGAGGT...TCCAAAATGCCACATTTCCTCCTGGGATGTGAACCTGAGAGGGTTGTGGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056518.13 |
||
| CDS-3UTR CCA 90 bp | CTACAGCCTTCCATTCAGCCAAGAAAAGCACTACCCTCTTTCCTCCCCCAAGGACATGCAGGGACGATCTaGCCAGTGCAGCGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQPSIQPRKALPSFLPQGHAGTI*PVQRSP Trigger: AGGAGATCGCTGCACTGGCCAGATCGTCCCTGCATG...TCCTTGGGGGAGGAAAGAGGGTAGTGCTTTTCTTGGCTGAATGGAAGGCTGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGCCCAGCCACAACCCTCTCAGGTTCACATCCCAGGAGGAAATGTGGCATGGTCCTTCACTACCTaGGAAATACCATGCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSAQPQPSQVHIPGGNVAWSFTT*EIPCRD Trigger: GTCCCTGCATGGTATTTCCCAGGTAGTGAAGGACCA...TGCCACATTTCCTCCTGGGATGTGAACCTGAGAGGGTTGTGGCTGGGCTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR CCA 90 bp | GTTGGCTCATATTTTCACCTTGGATCCTCTTACCTGTTGCCCAAGCCTCTGAGATTTCCCAGCTGCCTGTaGGCAGCGGGCAGAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGSYFHLGSSYLLPKPLRFPSCL*AAGRAA Trigger: AGCTGCTCTGCCCGCTGCCCACAGGCAGCTGGGAAA...TCTCAGAGGCTTGGGCAACAGGTAAGAGGATCCAAGGTGAAAATATGAGCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR TCA 90 bp | GTGGCTACAGCCTTCCATTCAGCCAAGAAAAGCACTACCCTCTTTCCTCCCCCAACTCTGCGACTTGTCTaGCAAGTCCATCGTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VATAFHSAKKSTTLFPPPTLRLV*QVHRPP Trigger: TGGAGGACGATGGACTTGTCAGACAAGTCGCAGAGT...TGGGGGAGGAAAGAGGGTAGTGCTTTTCTTGGCTGAATGGAAGGCTGTAGCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056518.13 |
||
| CDS-3UTR TCA 90 bp | CGAAGGGGGCAAGGGCACACTCTTTCATCTTTTCCAGTGCCTCCCAAAGAAGATGTCATCACCATCCACTaGAGACCATGCCCGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RRGQGHTLSSFPVPPKEDVITIH*RPCPEL Trigger: AAGCTCCGGGCATGGTCTTCAGTGGATGGTGATGAC...ATCTTCTTTGGGAGGCACTGGAAAAGATGAAAGAGTGTGCCCTTGCCCCCTTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR GCA 90 bp | AATGGAGAAGTGAGTGCTCCCAGAAGCCCTCTGAAAGCTTCAGAGCCCACATTTGGACGATCTGGCCAGTaGAGCGATCTCCTGGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: NGEVSAPRSPLKASEPTFGRSGQ*SDLLDG Trigger: ACCATCCAGGAGATCGCTGCACTGGCCAGATCGTCC...AAATGTGGGCTCTGAAGCTTTCAGAGGGCTTCTGGGAGCACTCACTTCTCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGCCACAACCCTCTCAGGTTCACATCCCAGGAGGAAATGTGGCATTTTGGAGCCACATCAGAGACTTaGTGCTGTCTTTCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSHNPLRFTSQEEMWHFGATSET*CCLSQL Trigger: CAGCTGGGAAAGACAGCAGCAAGTCTCTGATGTGGC...TCCAAAATGCCACATTTCCTCCTGGGATGTGAACCTGAGAGGGTTGTGGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR CCA 90 bp | GCCTCCCAAAGAAGATCGGCTCAAAGAACAGACCAGAAACCCCCTGTCTTTAGGCAGCGATCTCCTGGATaGTTAGAGCTCTCCGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: ASQRRSAQRTDQKPPVFRQRSPG*LELSGT Trigger: AGTCCCGGAGAGCTCTAACCATCCAGGAGATCGCTG...CCTAAAGACAGGGGGTTTCTGGTCTGTTCTTTGAGCCGATCTTCTTTGGGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR CCA 90 bp | CTACAGCCTTCCATTCAGCCAAGAAAAGCACTACCCTCTTTCCTCCCCCAAGGAGTGGGCTTGGTCACGTaGTCCTTCACTACCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LQPSIQPRKALPSFLPQGVGLVT*SFTTWE Trigger: TTCCCAGGTAGTGAAGGACCACGTGACCAAGCCCAC...TCCTTGGGGGAGGAAAGAGGGTAGTGCTTTTCTTGGCTGAATGGAAGGCTGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR GCA 90 bp | GTGGCTACAGCCTTCCATTCAGCCAAGAAAAGCACTACCCTCTTTCCTCCCCCAACATCAGAGACTTGCTaGTGTCTTTCCCAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VATAFHSAKKSTTLFPPPTSETC*CLSQLP Trigger: AGGCAGCTGGGAAAGACAGCAGCAAGTCTCTGATGT...TGGGGGAGGAAAGAGGGTAGTGCTTTTCTTGGCTGAATGGAAGGCTGTAGCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR GCA 90 bp | AAGCCTCTGAGATTCATTCTGCTGCCACTTACCAACCCCAGTGTCCTCGCAATCGCCACATCAGAGACTTaGTGCTGTCTTTCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KPLRFILLPLTNPSVLAIATSET*CCLSQL Trigger: CAGCTGGGAAAGACAGCAGCAAGTCTCTGATGTGGC...GATTGCGAGGACACTGGGGTTGGTAAGTGGCAGCAGAATGAATCTCAGAGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR CCA 90 bp | AAGCCTCTGAGATTCATTCTGCTGCCACTTACCAACCCCAGTGTCCTCGCAATCTCCAACATTCACCTCTaGCAAGTCCTGGCTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KPLRFILLPLTNPSVLAISNIHL*QVLAVH Trigger: GTGGACAGCCAGGACTTGCCAGAGGTGAATGTTGGA...GATTGCGAGGACACTGGGGTTGGTAAGTGGCAGCAGAATGAATCTCAGAGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056518.13 |
||
| CDS-3UTR CCA 90 bp | GTTGGCTCATATTTTCACCTTGGATCCTCTTACCTGTTGCCCAAGCCTCTGAGACATGCAGGGACGATCTaGCCAGTGCAGCGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VGSYFHLGSSYLLPKPLRHAGTI*PVQRSP Trigger: AGGAGATCGCTGCACTGGCCAGATCGTCCCTGCATG...TCTCAGAGGCTTGGGCAACAGGTAAGAGGATCCAAGGTGAAAATATGAGCCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR GCA 90 bp | CTACAGCCTTCCATTCAGCCAAGAAAAGCACTACCCTCTTTCCTCCCCCAAGGAACATCAGAGACTTGCTaGTGTCTTTCCCAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQPSIQPRKALPSFLPQGTSETC*CLSQLP Trigger: AGGCAGCTGGGAAAGACAGCAGCAAGTCTCTGATGT...TCCTTGGGGGAGGAAAGAGGGTAGTGCTTTTCTTGGCTGAATGGAAGGCTGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS-3UTR TCA 90 bp | CTACAGCCTTCCATTCAGCCAAGAAAAGCACTACCCTCTTTCCTCCCCCAAGGACTTGTTCACCCTCACTaGGGTCTGAATAGGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LQPSIQPRKALPSFLPQGLVHPH*GLNRRK Trigger: TTTCCTCCTATTCAGACCTCAGTGAGGGTGAACAAG...TCCTTGGGGGAGGAAAGAGGGTAGTGCTTTTCTTGGCTGAATGGAAGGCTGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| 3UTR CAA 72 bp | CTCTCAGGTTCACATCCCAGGAGGAAATGTGGCATTTaGGATTCAAGAAACATGAACGTCACTGTCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSGSHPRRKCGI*DSRNMNVTVCH Trigger: GTGGCAGACAGTGACGTTCATGTTTCTTGAATCCAAAATGCCACATTTCCTCCTGGGATGTGAACCTGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
||
| CDS TCA 90 bp | GCTCCACAGAGCCCTGGCGCACAGGCCTGGAGAATCGACGACCTGTaGAGAGGTCCTGGAGGTGGGACCCCAGAGGCCCAGCCATGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: APQSPGAQAWRIDDL*RGPGGGTPEAQPCL Trigger: CAGACATGGCTGGGCCTCTGGGGTCCCACCTCCAGGACCTCTTCACAGGTCGTCGATTCTCCAGGCCTGTGCGCCAGGGCTCTGTGGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 ENSMUST00000128273.2 ENSMUST00000232207.2 |
||
| CDS-3UTR CAA 90 bp | TCGCAATCTGCCAGCGGCCTCCACTGGCTGATCAGCAACGCCCTGCCTGGGACAAGAGCTCTCCGGGACTaGGGCAGCATCGCGACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SQSASGLHWLISNALPGTRALRD*GSIATV Trigger: CACAGTCGCGATGCTGCCCAAGTCCCGGAGAGCTCT...TGTCCCAGGCAGGGCGTTGCTGATCAGCCAGTGGAGGCCGCTGGCAGATTGCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056518.13 |
||
| CDS CCA 90 bp | CCCTGGCGCACAGGCCTGGAGAATCGACGACCTGTGAAGAGGTCCTaGAGGTGGGACCCCAGAGGCCCAGCCATGTCTGTGTCAATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PWRTGLENRRPVKRS*RWDPRGPAMSVSIP Trigger: GGGAATTGACACAGACATGGCTGGGCCTCTGGGGTCCCACCTCCAGGACCTCTTCACAGGTCGTCGATTCTCCAGGCCTGTGCGCCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 ENSMUST00000128273.2 ENSMUST00000232207.2 |
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| CDS CCA 90 bp | CGCACAGGCCTGGAGAATCGACGACCTGTGAAGAGGTCCTGGAGGTaGGACCCCAGAGGCCCAGCCATGTCTGTGTCAATTCCCCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: RTGLENRRPVKRSWR*DPRGPAMSVSIPPV Trigger: TACTGGGGGAATTGACACAGACATGGCTGGGCCTCTGGGGTCCCACCTCCAGGACCTCTTCACAGGTCGTCGATTCTCCAGGCCTGTGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 ENSMUST00000128273.2 ENSMUST00000232207.2 |
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| CDS CCA 90 bp | TGGGAAATACCATGCAGGGACGATCTGGCCAGTGCAGCGATCTCCTaGATGGTTAGAGCTCTCCGGGACTTGGGCAGCATCGCGACTGTG | + |
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Preference number: 5 (lower is better) Translates to: WEIPCRDDLASAAIS*MVRALRDLGSIATV Trigger: CACAGTCGCGATGCTGCCCAAGTCCCGGAGAGCTCTAACCATCCAGGAGATCGCTGCACTGGCCAGATCGTCCCTGCATGGTATTTCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056518.13 |
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| CDS CCA 90 bp | AAGAGGCCACATCAGAGACTTGCTGCTGTCTTTCCCAGCTGCCTGTaGGCAGCGGGCAGAGCAGCTGGCAGTCCTTACAGGAATCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: KRPHQRLAAVFPSCL*AAGRAAGSPYRNQA Trigger: AGCCTGATTCCTGTAAGGACTGCCAGCTGCTCTGCCCGCTGCCCACAGGCAGCTGGGAAAGACAGCAGCAAGTCTCTGATGTGGCCTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| CDS CCA 90 bp | TGGCCAGTGCAGCGATCTCCTGGATGGTTAGAGCTCTCCGGGACTTaGGCAGCATCGCGACTGTGTCTCCAACATTCACCTCTGGCAAGT | + |
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Preference number: 5 (lower is better) Translates to: WPVQRSPGWLELSGT*AASRLCLQHSPLAS Trigger: ACTTGCCAGAGGTGAATGTTGGAGACACAGTCGCGATGCTGCCCAAGTCCCGGAGAGCTCTAACCATCCAGGAGATCGCTGCACTGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056518.13 |
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| CDS CCA 90 bp | AAATACCATGCAGGGACGATCTGGCCAGTGCAGCGATCTCCTGGATaGTTAGAGCTCTCCGGGACTTGGGCAGCATCGCGACTGTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: KYHAGTIWPVQRSPG*LELSGTWAASRLCL Trigger: GAGACACAGTCGCGATGCTGCCCAAGTCCCGGAGAGCTCTAACCATCCAGGAGATCGCTGCACTGGCCAGATCGTCCCTGCATGGTATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056518.13 |
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| CDS-3UTR CAA 90 bp | TTCAGTCACGCACTGCACATGGACTCGGATGAAGAGAAAAGCAGAGGAGAGGGGGGTGAGTCACTAGGCTaGCTCCAGCCCTTCCATTCA | + |
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Preference number: 5 (lower is better) Translates to: FSHALHMDSDEEKSRGEGGESLG*LQPFHS Trigger: TGAATGGAAGGGCTGGAGCAAGCCTAGTGACTCACC...CCCCTCTCCTCTGCTTTTCTCTTCATCCGAGTCCATGTGCAGTGCGTGACTGAA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| CDS-3UTR CAA 90 bp | GCCTCCCAAAGAAGATCGGCTCAAAGAACAGACCAGAAACCCCCTGTCTTTAGGGGCCACATCAGAGACTaGCTGCTGTCTTTCCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: ASQRRSAQRTDQKPPVFRGHIRD*LLSFPA Trigger: AGCTGGGAAAGACAGCAGCAAGTCTCTGATGTGGCC...CCTAAAGACAGGGGGTTTCTGGTCTGTTCTTTGAGCCGATCTTCTTTGGGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| CDS-3UTR CAA 90 bp | GCCTCCCAAAGAAGATCGGCTCAAAGAACAGACCAGAAACCCCCTGTCTTTAGGAAGCCACTCTGCGACTaGTCTGACAAGTCCATCGTC | + |
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Preference number: 5 (lower is better) Translates to: ASQRRSAQRTDQKPPVFRKPLCD*SDKSIV Trigger: GACGATGGACTTGTCAGACAAGTCGCAGAGTGGCTT...CCTAAAGACAGGGGGTTTCTGGTCTGTTCTTTGAGCCGATCTTCTTTGGGAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056518.13 |
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| CDS-3UTR CAA 90 bp | GCAAGGGCACACTCTTTCATCTTTTCCAGTGCCTCCCAAAGAAGATCGGCTCAATGCAAAGCGAGCCTCTaGTTCACCCTCACTGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: ARAHSFIFSSASQRRSAQCKASL*FTLTEV Trigger: GACCTCAGTGAGGGTGAACAAGAGGCTCGCTTTGCA...TTGAGCCGATCTTCTTTGGGAGGCACTGGAAAAGATGAAAGAGTGTGCCCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| CDS-3UTR CAA 90 bp | GCAAGGGCACACTCTTTCATCTTTTCCAGTGCCTCCCAAAGAAGATCGGCTCAAGGCCACATCAGAGACTaGCTGCTGTCTTTCCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: ARAHSFIFSSASQRRSAQGHIRD*LLSFPA Trigger: AGCTGGGAAAGACAGCAGCAAGTCTCTGATGTGGCC...TTGAGCCGATCTTCTTTGGGAGGCACTGGAAAAGATGAAAGAGTGTGCCCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| CDS-3UTR CAA 90 bp | TGCTGTTGGCTCATATTTTCACCTTGGATCCTCTTACCTGTTGCCCAAGCCTCTGGTGAGTCACTAGGCTaGCTCCAGCCCTTCCATTCA | + |
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Preference number: 5 (lower is better) Translates to: CCWLIFSPWILLPVAQASGESLG*LQPFHS Trigger: TGAATGGAAGGGCTGGAGCAAGCCTAGTGACTCACC...AGAGGCTTGGGCAACAGGTAAGAGGATCCAAGGTGAAAATATGAGCCAACAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 |
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| CDS TCA 72 bp | AGCCCTGGCGCACAGGCCTGGAGAATCGACGACCTGTaGAGAGGTCCTGGAGGTGGGACCCCAGAGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: SPGAQAWRIDDL*RGPGGGTPEAQ Trigger: CTGGGCCTCTGGGGTCCCACCTCCAGGACCTCTTCACAGGTCGTCGATTCTCCAGGCCTGTGCGCCAGGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 ENSMUST00000128273.2 ENSMUST00000232207.2 |
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| CDS CCA 72 bp | GGCAGCCTGGCAAGGAGCAGCTCTTCACCCAACAGCTaGGAGGTCATCCTGGCTGGGGAGCCCAGTAACCCA | + |
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Preference number: 6 (lower is better) Translates to: GSLARSSSSPNS*EVILAGEPSNP Trigger: TGGGTTACTGGGCTCCCCAGCCAGGATGACCTCCCAGCTGTTGGGTGAAGAGCTGCTCCTTGCCAGGCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 ENSMUST00000128273.2 |
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| CDS CCA 72 bp | GCAGGGACGATCTGGCCAGTGCAGCGATCTCCTGGATaGTTAGAGCTCTCCGGGACTTGGGCAGCATCGCGA | + |
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Preference number: 6 (lower is better) Translates to: AGTIWPVQRSPG*LELSGTWAASR Trigger: TCGCGATGCTGCCCAAGTCCCGGAGAGCTCTAACCATCCAGGAGATCGCTGCACTGGCCAGATCGTCCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056518.13 |
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| CDS CCA 72 bp | ACAGGCCTGGAGAATCGACGACCTGTGAAGAGGTCCTaGAGGTGGGACCCCAGAGGCCCAGCCATGTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: TGLENRRPVKRS*RWDPRGPAMSV Trigger: CACAGACATGGCTGGGCCTCTGGGGTCCCACCTCCAGGACCTCTTCACAGGTCGTCGATTCTCCAGGCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 ENSMUST00000128273.2 ENSMUST00000232207.2 |
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| CDS CCA 72 bp | CCATGCAGGGACGATCTGGCCAGTGCAGCGATCTCCTaGATGGTTAGAGCTCTCCGGGACTTGGGCAGCATC | + |
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Preference number: 6 (lower is better) Translates to: PCRDDLASAAIS*MVRALRDLGSI Trigger: GATGCTGCCCAAGTCCCGGAGAGCTCTAACCATCCAGGAGATCGCTGCACTGGCCAGATCGTCCCTGCATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056518.13 |
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| CDS CAA 90 bp | CTGGCCAGTGCAGCGATCTCCTGGATGGTTAGAGCTCTCCGGGACTaGGGCAGCATCGCGACTGTGTCTCCAACATTCACCTCTGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: LASAAISWMVRALRD*GSIATVSPTFTSGK Trigger: CTTGCCAGAGGTGAATGTTGGAGACACAGTCGCGATGCTGCCCAAGTCCCGGAGAGCTCTAACCATCCAGGAGATCGCTGCACTGGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056518.13 |
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| CDS GCA 72 bp | GACCATGCCCGGAGCTTGGCTTCTGCAATAGCAAACTaGTCGGCCACTCCTGCTGCAAAGCGAGCCTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: DHARSLASAIAN*SATPAAKRASC Trigger: ACAAGAGGCTCGCTTTGCAGCAGGAGTGGCCGAGCAGTTTGCTATTGCAGAAGCCAAGCTCCGGGCATGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 ENSMUST00000128273.2 ENSMUST00000232207.2 |
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| CDS CAA 72 bp | GCAGCGATCTCCTGGATGGTTAGAGCTCTCCGGGACTaGGGCAGCATCGCGACTGTGTCTCCAACATTCACC | + |
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Preference number: 6 (lower is better) Translates to: AAISWMVRALRD*GSIATVSPTFT Trigger: GGTGAATGTTGGAGACACAGTCGCGATGCTGCCCAAGTCCCGGAGAGCTCTAACCATCCAGGAGATCGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056518.13 |
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| CDS CCA 72 bp | CAGCGATCTCCTGGATGGTTAGAGCTCTCCGGGACTTaGGCAGCATCGCGACTGTGTCTCCAACATTCACCT | + |
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Preference number: 6 (lower is better) Translates to: QRSPGWLELSGT*AASRLCLQHSP Trigger: AGGTGAATGTTGGAGACACAGTCGCGATGCTGCCCAAGTCCCGGAGAGCTCTAACCATCCAGGAGATCGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056518.13 |
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| CDS CCA 72 bp | CCTTCACTACCTGGGAAATACCATGCAGGGACGATCTaGCCAGTGCAGCGATCTCCTGGATGGTTAGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: PSLPGKYHAGTI*PVQRSPGWLEL Trigger: GAGCTCTAACCATCCAGGAGATCGCTGCACTGGCCAGATCGTCCCTGCATGGTATTTCCCAGGTAGTGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 ENSMUST00000128273.2 ENSMUST00000149543.9 ENSMUST00000232207.2 |
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| CDS TCA 72 bp | CTCCTGCTGCAAAGCGAGCCTCTTGTTCACCCTCACTaGGGTCTGAATAGGAGGAAAAGGCTGATTCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LLLQSEPLVHPH*GLNRRKRLIPE Trigger: CTCTGGAATCAGCCTTTTCCTCCTATTCAGACCTCAGTGAGGGTGAACAAGAGGCTCGCTTTGCAGCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056518.13 ENSMUST00000118919.9 ENSMUST00000128273.2 ENSMUST00000232207.2 |
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