Pregenerated sensors for FAM126A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028995Ensembl transcript IDs: ENSMUST00000030849.13, ENSMUST00000101513.9, ENSMUST00000115109.2, ENSMUST00000197617.5
Found 259 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCGTGTCCCAGCCATGCCAAGGGGCTTTCTCGAGGCTCCAGGAAGTaGAAGGGTAGCAGCACCCGGGCAGCTGGATCCTCTGCTTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: PCPSHAKGLSRGSRK*KGSSTRAAGSSASL Trigger: GAGAGAAGCAGAGGATCCAGCTGCCCGGGTGCTGCTACCCTTCCACTTCCTGGAGCCTCGAGAAAGCCCCTTGGCATGGCTGGGACACGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR GCA 90 bp | CAGCACCCGGGCAGCTGGATCCTCTGCTTCTCTCTTCACTTGGATTaGCGAGGTTCATGCCAGGCCCAGTGTCAGAGGCGTGCAAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: QHPGSWILCFSLHLD*RGSCQAQCQRRARV Trigger: AACCCTTGCACGCCTCTGACACTGGGCCTGGCATGAACCTCGGCAATCCAAGTGAAGAGAGAAGCAGAGGATCCAGCTGCCCGGGTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR TCA 90 bp | GGGAGCAGAGCCGTCTTTCCAGCTTCACTGGCTCCAGGAGCGAAGTaGCAGTTACTCTGCAGACAGAGTGACGCTAATACTAGGAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: GSRAVFPASLAPGAK*QLLCRQSDANTRRS Trigger: GGACCTCCTAGTATTAGCGTCACTCTGTCTGCAGAGTAACTGTCACTTCGCTCCTGGAGCCAGTGAAGCTGGAAAGACGGCTCTGCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR GCA 90 bp | ATTCAAGACCCCAGGCTCCTGCCAGGACCAGGCATGAAGACTCAGTaGTTTCATAAGGGAGCAGAGCCGTCTTTCCAGCTTCACTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: IQDPRLLPGPGMKTQ*FHKGAEPSFQLHWL Trigger: GAGCCAGTGAAGCTGGAAAGACGGCTCTGCTCCCTTATGAAAGCACTGAGTCTTCATGCCTGGTCCTGGCAGGAGCCTGGGGTCTTGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030849.13 ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR GCA 90 bp | AGCTGGATCCTCTGCTTCTCTCTTCACTTGGATTGCCGAGGTTCATaGCAGGCCCAGTGTCAGAGGCGTGCAAGGGTTGAGTCAATCCAA | + |
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Preference number: 1 (lower is better) Translates to: SWILCFSLHLDCRGS*QAQCQRRARVESIQ Trigger: TTGGATTGACTCAACCCTTGCACGCCTCTGACACTGGGCCTGGCATGAACCTCGGCAATCCAAGTGAAGAGAGAAGCAGAGGATCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR GCA 90 bp | GAGAGAGAAGCTCAAGGTTCTCGCTCTGGGCTCTCTGGGTTTGCTTaGGAGCAAAGTGATCTCTGCAAGACTCCCCTGCAGTTTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: EREAQGSRSGLSGFA*EQSDLCKTPLQFLS Trigger: AGAGAGAAACTGCAGGGGAGTCTTGCAGAGATCACTTTGCTCGCAAGCAAACCCAGAGAGCCCAGAGCGAGAACCTTGAGCTTCTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR CCA 90 bp | TGCTCCAGCAACACAGCCAATGGCGGGAGAAGGGCTACGTGGGACTaGGGCACCACTGACTTGTTCAAAGGATTTACTAAATACAGTGGC | + |
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Preference number: 1 (lower is better) Translates to: CSSNTANGGRRATWD*GTTDLFKGFTKYSG Trigger: GCCACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGTCCCACGTAGCCCTTCTCCCGCCATTGGCTGTGTTGCTGGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR CCA 90 bp | GGCATCTGCTCCAGCAACACAGCCAATGGCGGGAGAAGGGCTACGTaGGACTGGGGCACCACTGACTTGTTCAAAGGATTTACTAAATAC | + |
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Preference number: 1 (lower is better) Translates to: GICSSNTANGGRRAT*DWGTTDLFKGFTKY Trigger: GTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGTCCCACGTAGCCCTTCTCCCGCCATTGGCTGTGTTGCTGGAGCAGATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR CCA 90 bp | ACTCAGTGCTTTCATAAGGGAGCAGAGCCGTCTTTCCAGCTTCACTaGCTCCAGGAGCGAAGTGACAGTTACTCTGCAGACAGAGTGACG | + |
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Preference number: 1 (lower is better) Translates to: TQCFHKGAEPSFQLH*LQERSDSYSADRVT Trigger: CGTCACTCTGTCTGCAGAGTAACTGTCACTTCGCTCCTGGAGCCAGTGAAGCTGGAAAGACGGCTCTGCTCCCTTATGAAAGCACTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR GCA 90 bp | GCACCAAGCCTGGGCGTCCATCTAGAGGACGCAGAGTTTAGCTTCTaGCTTACCACATTTCTTACTGCTTGGTTGGCAGGAATGGGTGAT | + |
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Preference number: 1 (lower is better) Translates to: APSLGVHLEDAEFSF*LTTFLTAWLAGMGD Trigger: ATCACCCATTCCTGCCAACCAAGCAGTAAGAAATGTGGTAAGGCAGAAGCTAAACTCTGCGTCCTCTAGATGGACGCCCAGGCTTGGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR GCA 90 bp | TCCTCTGTGTCTCATCTAACAGCTCAAGAGCAAAGAGGGCTTTCCTaGTTAAACCCGAAGTGTCTGCAGCGCTGGGCTCATTTATTGCCA | + |
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Preference number: 1 (lower is better) Translates to: SSVSHLTAQEQRGLS*LNPKCLQRWAHLLP Trigger: TGGCAATAAATGAGCCCAGCGCTGCAGACACTTCGGGTTTAAGCAGGAAAGCCCTCTTTGCTCTTGAGCTGTTAGATGAGACACAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR TCA 90 bp | GACCGTCTCTGGTTCTTTCCTACACTTGTCTTGTTACTACAATTGTaGCTACTGTTTGATAGACCCGACTGGCTGGTGCTAGACGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: DRLWFFPTLVLLLQL*LLFDRPDWLVLDAA Trigger: GGCTGCGTCTAGCACCAGCCAGTCGGGTCTATCAAACAGTAGTCACAATTGTAGTAACAAGACAAGTGTAGGAAAGAACCAGAGACGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR GCA 90 bp | TTTGTGGCTGGTTACACTTTAGACACCGAAAGGGACTTTCATGCCTaGAGTCCAGATCACACACTTCAGAAGGTCACCTACCAGCAATCT | + |
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Preference number: 1 (lower is better) Translates to: FVAGYTLDTERDFHA*SPDHTLQKVTYQQS Trigger: AGATTGCTGGTAGGTGACCTTCTGAAGTGTGTGATCTGGACTGCAGGCATGAAAGTCCCTTTCGGTGTCTAAAGTGTAACCAGCCACAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR TCA 90 bp | TGTGCAAGTTACAAAGTACAGAAGGCAGCCCACGAGTGCTCTCTGTaGAGACGAGCAGTATTAAAAAGCACACATCTCCATTTCCCAATG | + |
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Preference number: 1 (lower is better) Translates to: CASYKVQKAAHECSL*RRAVLKSTHLHFPM Trigger: CATTGGGAAATGGAGATGTGTGCTTTTTAATACTGCTCGTCTTCACAGAGAGCACTCGTGGGCTGCCTTCTGTACTTTGTAACTTGCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR CCA 90 bp | GAGACTCATTGCACTGTGCAAGCTGTTACAGAATTTGTAAGAGGATaGACGTGTGTGCAACTGTTCCTCTGTGTCTCATCTAACAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: ETHCTVQAVTEFVRG*TCVQLFLCVSSNSS Trigger: TGAGCTGTTAGATGAGACACAGAGGAACAGTTGCACACACGTCCATCCTCTTACAAATTCTGTAACAGCTTGCACAGTGCAATGAGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR TCA 90 bp | CCACACCCCAGGAAATCAATTGATGTAAATCATTTGGAGCAAACTTaGGACTCATTGCACTGTGCAAGCTGTTACAGAATTTGTAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: PHPRKSIDVNHLEQT*DSLHCASCYRICKR Trigger: CCTCTTACAAATTCTGTAACAGCTTGCACAGTGCAATGAGTCTCAAGTTTGCTCCAAATGATTTACATCAATTGATTTCCTGGGGTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR TCA 90 bp | ATCTTAATAGAAACAAGCCTACAAAGCCACACAACTTCTCACCTTTaGAAGATGAGTAGGAAAGTGACTAGAACAGCTGTTGCCACAGGT | + |
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Preference number: 1 (lower is better) Translates to: ILIETSLQSHTTSHL*KMSRKVTRTAVATG Trigger: ACCTGTGGCAACAGCTGTTCTAGTCACTTTCCTACTCATCTTTCAAAGGTGAGAAGTTGTGTGGCTTTGTAGGCTTGTTTCTATTAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR TCA 90 bp | TTATTACTGTTTCTTTCTCCTGTCACACCAGGAAACCCAGCTAGATaGGCCCGAGGTTTAATGCAAAACGAAAAGATTCCAAGTTCTTCA | + |
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Preference number: 1 (lower is better) Translates to: LLLFLSPVTPGNPAR*ARGLMQNEKIPSSS Trigger: TGAAGAACTTGGAATCTTTTCGTTTTGCATTAAACCTCGGGCTCATCTAGCTGGGTTTCCTGGTGTGACAGGAGAAAGAAACAGTAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
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| 3UTR TCA 90 bp | AAAGAACTTTACTGTTCATGTAACACCACACCCCAGGAAATCAATTaGTGTAAATCATTTGGAGCAAACTTGAGACTCATTGCACTGTGC | + |
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Preference number: 1 (lower is better) Translates to: KELYCSCNTTPQEIN*CKSFGANLRLIALC Trigger: GCACAGTGCAATGAGTCTCAAGTTTGCTCCAAATGATTTACATCAATTGATTTCCTGGGGTGTGGTGTTACATGAACAGTAAAGTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR CAA 90 bp | GCAGCACCCGGGCAGCTGGATCCTCTGCTTCTCTCTTCACTTGGATaGCCGAGGTTCATGCCAGGCCCAGTGTCAGAGGCGTGCAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: AAPGQLDPLLLSSLG*PRFMPGPVSEACKG Trigger: ACCCTTGCACGCCTCTGACACTGGGCCTGGCATGAACCTCGGCAATCCAAGTGAAGAGAGAAGCAGAGGATCCAGCTGCCCGGGTGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR-3UTR GCA 90 bp | AATACAGTGGCCGCAGTCTTAGCCAGGCCTTGGCTGCTGGGCTTGGGCAGGGACTCTGCAAGACTCCCCTaGAGTTTCTCTCTCCTTCGC | + |
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Preference number: 2 (lower is better) Translates to: NTVAAVLARPWLLGLGRDSARLP*SFSLLR Trigger: GCGAAGGAGAGAGAAACTGCAGGGGAGTCTTGCAGA...GTCCCTGCCCAAGCCCAGCAGCCAAGGCCTGGCTAAGACTGCGGCCACTGTATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR-3UTR CCA 90 bp | CTACAGGCAGAAAATCTATTGGCATCTGCTCCAGCAACACAGCCAATGGCGGGACTTGGCTGCTGGGCTTaGGCAGGGACTGGCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LQAENLLASAPATQPMAGLGCWA*AGTGWR Trigger: CCTCCAGCCAGTCCCTGCCCAAGCCCAGCAGCCAAG...TCCCGCCATTGGCTGTGTTGCTGGAGCAGATGCCAATAGATTTTCTGCCTGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTTCCTCAGCGTGCTCTCCTTTACTGAGGTCTCATGTGCCCACGGGTGTACCCACTGCTCTCACGTaGGGCTGTTTTCTCACATGC | + |
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Preference number: 2 (lower is better) Translates to: QASSACSPLLRSHVPTGVPTALT*GCFLTC Trigger: GCATGTGAGAAAACAGCCTCACGTGAGAGCAGTGGG...TACACCCGTGGGCACATGAGACCTCAGTAAAGGAGAGCACGCTGAGGAAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR-3UTR GCA 90 bp | GAAAGGCCAGAGGCAGATGGCCAGTTCCAACAAGACAGACAACTTGGGGCCCAACTCCCAGCTTCCCCTTaGAACTGTCCTGCCAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: ERPEADGQFQQDRQLGAQLPASP*NCPARQ Trigger: TTGCCTGGCAGGACAGTTGCAAGGGGAAGCTGGGAG...TTGGGCCCCAAGTTGTCTGTCTTGTTGGAACTGGCCATCTGCCTCTGGCCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGCGAAGTGACAGTTACTCTGCAGACAGAGTGACGCTAATACTAGGAGGTCTTGGCTGCTGGGCTTaGGCAGGGACTGGCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: QERSDSYSADRVTLILGGLGCWA*AGTGWR Trigger: CCTCCAGCCAGTCCCTGCCCAAGCCCAGCAGCCAAG...ACCTCCTAGTATTAGCGTCACTCTGTCTGCAGAGTAACTGTCACTTCGCTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGGCACCACTGACTTGTTCAAAGGATTTACTAAATACAGTGGCCGCAGTCCCAGGCCTTGGCTGCTaGGCTTGGGCAGGGACTGGC | + |
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Preference number: 2 (lower is better) Translates to: TGAPLTCSKDLLNTVAAVPGLGC*AWAGTG Trigger: GCCAGTCCCTGCCCAAGCCCAGCAGCCAAGGCCTGG...GACTGCGGCCACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR CAA 90 bp | GCCAATGGCGGGAGAAGGGCTACGTGGGACTGGGGCACCACTGACTaGTTCAAAGGATTTACTAAATACAGTGGCCGCAGTCTTAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: ANGGRRATWDWGTTD*FKGFTKYSGRSLSQ Trigger: CTGGCTAAGACTGCGGCCACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGTCCCACGTAGCCCTTCTCCCGCCATTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR-3UTR GCA 90 bp | GTCTGCAGCGCTGGGCTCATTTATTGCCAACAAGAGAGGCAAAAGGTGCTGCATACCCTGCTCCTCTCATaGCCCAGTGTAGCACCACAG | + |
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Preference number: 2 (lower is better) Translates to: VCSAGLIYCQQERQKVLHTLLLS*PSVAPQ Trigger: CTGTGGTGCTACACTGGGGCATGAGAGGAGCAGGGT...ATGCAGCACCTTTTGCCTCTCTTGTTGGCAATAAATGAGCCCAGCGCTGCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR-3UTR CCA 90 bp | GGGAGAAGGGCTACGTGGGACTGGGGCACCACTGACTTGTTCAAAGGATTTACTTTTGATAGACCCGACTaGCTGGTGCTAGACGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: GRRATWDWGTTDLFKGFTFDRPD*LVLDAA Trigger: GGCTGCGTCTAGCACCAGCCAGTCGGGTCTATCAAA...AGTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGTCCCACGTAGCCCTTCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR-3UTR CCA 90 bp | CTACAGGCAGAAAATCTATTGGCATCTGCTCCAGCAACACAGCCAATGGCGGGAAGGGCTACGTGGGACTaGGGCACCACTGACTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: LQAENLLASAPATQPMAGRATWD*GTTDLF Trigger: GAACAAGTCAGTGGTGCCCCAGTCCCACGTAGCCCT...TCCCGCCATTGGCTGTGTTGCTGGAGCAGATGCCAATAGATTTTCTGCCTGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR CAA 90 bp | CTTCAGAGAGAGAAGCTCAAGGTTCTCGCTCTGGGCTCTCTGGGTTaGCTTGCGAGCAAAGTGATCTCTGCAAGACTCCCCTGCAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: LQREKLKVLALGSLG*LASKVISARLPCSF Trigger: GAAACTGCAGGGGAGTCTTGCAGAGATCACTTTGCTCGCAAGCAAACCCAGAGAGCCCAGAGCGAGAACCTTGAGCTTCTCTCTCTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR-3UTR CCA 90 bp | GAAAGGCCAGAGGCAGATGGCCAGTTCCAACAAGACAGACAACTTGGGGCCCAATTTCTCACATGCCTGTaGAGCAGCATGGCTTCATGG | + |
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Preference number: 2 (lower is better) Translates to: ERPEADGQFQQDRQLGAQFLTCL*SSMASW Trigger: CCATGAAGCCATGCTGCTCCACAGGCATGTGAGAAA...TTGGGCCCCAAGTTGTCTGTCTTGTTGGAACTGGCCATCTGCCTCTGGCCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR-3UTR CCA 90 bp | GATTTACTAAATACAGTGGCCGCAGTCTTAGCCAGGCCTTGGCTGCTGGGCTTGCCTCCCGACCGTCTCTaGTTCTTTCCTACACTTGTC | + |
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Preference number: 2 (lower is better) Translates to: DLLNTVAAVLARPWLLGLPPDRL*FFPTLV Trigger: GACAAGTGTAGGAAAGAACCAGAGACGGTCGGGAGG...CAAGCCCAGCAGCCAAGGCCTGGCTAAGACTGCGGCCACTGTATTTAGTAAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR-3UTR CCA 90 bp | GGGAGAAGGGCTACGTGGGACTGGGGCACCACTGACTTGTTCAAAGGATTTACTTCAAGGTTCTCGCTCTaGGCTCTCTGGGTTTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: GRRATWDWGTTDLFKGFTSRFSL*ALWVCL Trigger: CAAGCAAACCCAGAGAGCCCAGAGCGAGAACCTTGA...AGTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGTCCCACGTAGCCCTTCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR-3UTR GCA 90 bp | TCATGCCCCAGTGTAGCACCACAGCACGTGCACCTCACAGGAGCGTCAGCCAACGCAGAGTTTAGCTTCTaGCTTACCACATTTCTTACT | + |
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Preference number: 2 (lower is better) Translates to: SCPSVAPQHVHLTGASANAEFSF*LTTFLT Trigger: AGTAAGAAATGTGGTAAGGCAGAAGCTAAACTCTGC...GTTGGCTGACGCTCCTGTGAGGTGCACGTGCTGTGGTGCTACACTGGGGCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR-3UTR GCA 90 bp | CTCGAGGCTCCAGGAAGTGGAAGGGTAGCAGCACCCGGGCAGCTGGATCCTCTGAAGAGAGGCAAAAGGTaGTGCATTTTTATTACAGAA | + |
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Preference number: 2 (lower is better) Translates to: LEAPGSGRVAAPGQLDPLKRGKR*CIFITE Trigger: TTCTGTAATAAAAATGCAGCACCTTTTGCCTCTCTT...CAGAGGATCCAGCTGCCCGGGTGCTGCTACCCTTCCACTTCCTGGAGCCTCGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR-3UTR CCA 90 bp | AGTGACAGTTACTCTGCAGACAGAGTGACGCTAATACTAGGAGGTCCCTGCTGGTCTTTCCAGCTTCACTaGCTCCAGGAGCGAAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: SDSYSADRVTLILGGPCWSFQLH*LQERSD Trigger: GTCACTTCGCTCCTGGAGCCAGTGAAGCTGGAAAGA...CCAGCAGGGACCTCCTAGTATTAGCGTCACTCTGTCTGCAGAGTAACTGTCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR-3UTR TCA 90 bp | CTACAGGCAGAAAATCTATTGGCATCTGCTCCAGCAACACAGCCAATGGCGGGAGGACTGGGGCACCACTaGCTTGTTCAAAGGATTTAC | + |
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Preference number: 2 (lower is better) Translates to: LQAENLLASAPATQPMAGGLGHH*LVQRIY Trigger: GTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGTCC...TCCCGCCATTGGCTGTGTTGCTGGAGCAGATGCCAATAGATTTTCTGCCTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR-3UTR CCA 90 bp | AAGTGTCTGCAGCGCTGGGCTCATTTATTGCCAACAAGAGAGGCAAAAGGTGCTTCTTTCCAGCTTCACTaGCTCCAGGAGCGAAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: KCLQRWAHLLPTREAKGASFQLH*LQERSD Trigger: GTCACTTCGCTCCTGGAGCCAGTGAAGCTGGAAAGA...AGCACCTTTTGCCTCTCTTGTTGGCAATAAATGAGCCCAGCGCTGCAGACACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGGCACCACTGACTTGTTCAAAGGATTTACTAAATACAGTGGCCGCAGTCTTTGATAGACCCGACTaGCTGGTGCTAGACGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: TGAPLTCSKDLLNTVAAVFDRPD*LVLDAA Trigger: GGCTGCGTCTAGCACCAGCCAGTCGGGTCTATCAAA...GACTGCGGCCACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR-3UTR CCA 90 bp | GGGGAAAAGAGTTCCCAAGAAATAACACGACCACATCTCAGCTTACTGCAAACTAGGGCTACGTGGGACTaGGGCACCACTGACTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: GEKSSQEITRPHLSLLQTRATWD*GTTDLF Trigger: GAACAAGTCAGTGGTGCCCCAGTCCCACGTAGCCCT...AGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTCTTGGGAACTCTTTTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR-3UTR GCA 90 bp | CGTGGGACTGGGGCACCACTGACTTGTTCAAAGGATTTACTAAATACAGTGGCCGGCATGAAGACTCAGTaGTTTCATAAGGGAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: RGTGAPLTCSKDLLNTVAGMKTQ*FHKGAE Trigger: CTCTGCTCCCTTATGAAAGCACTGAGTCTTCATGCC...GGCCACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGTCCCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| 3UTR-3UTR GCA 90 bp | GGACGTGTGTGCAACTGTTCCTCTGTGTCTCATCTAACAGCTCAAGAGCAAAGACGAAAGGGACTTTCATaGCTGCAGTCCAGATCACAC | + |
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Preference number: 2 (lower is better) Translates to: GRVCNCSSVSHLTAQEQRRKGLS*LQSRSH Trigger: GTGTGATCTGGACTGCAGGCATGAAAGTCCCTTTCG...TCTTTGCTCTTGAGCTGTTAGATGAGACACAGAGGAACAGTTGCACACACGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR-3UTR GCA 90 bp | TCAGTTACAATACTTAGCACAGGCTTCCTCAGCGTGCTCTCCTTTACTGAGGTCGGCAGCTGGATCCTCTaGTTCTCTCTTCACTTGGAT | + |
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Preference number: 2 (lower is better) Translates to: SVTILSTGFLSVLSFTEVGSWIL*FSLHLD Trigger: ATCCAAGTGAAGAGAGAAGCAGAGGATCCAGCTGCC...GACCTCAGTAAAGGAGAGCACGCTGAGGAAGCCTGTGCTAAGTATTGTAACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR-3UTR CCA 90 bp | AGTGACAGTTACTCTGCAGACAGAGTGACGCTAATACTAGGAGGTCCCTGCTGGAGGCAGAAAATCTATTaGCATCTGCTCCAGCAACAC | + |
|
Preference number: 2 (lower is better) Translates to: SDSYSADRVTLILGGPCWRQKIY*HLLQQH Trigger: GTGTTGCTGGAGCAGATGCCAATAGATTTTCTGCCT...CCAGCAGGGACCTCCTAGTATTAGCGTCACTCTGTCTGCAGAGTAACTGTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR-3UTR TCA 90 bp | CTCCTTCGCTCCAGCTTTGCTTCCTCCCGACCGTCTCTGGTTCTTTCCTACACTTTGTTACTACAATTGTaGCTACTGTTTGATAGACCC | + |
|
Preference number: 2 (lower is better) Translates to: LLRSSFASSRPSLVLSYTLLLQL*LLFDRP Trigger: GGGTCTATCAAACAGTAGTCACAATTGTAGTAACAA...AGTGTAGGAAAGAACCAGAGACGGTCGGGAGGAAGCAAAGCTGGAGCGAAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR-3UTR GCA 90 bp | CCACGAGTGCTCTCTGTGAAGACGAGCAGTATTAAAAAGCACACATCTCCATTTCAGGCTTCCTCAGCGTaGTCTCCTTTACTGAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: PRVLSVKTSSIKKHTSPFQASSA*SPLLRS Trigger: AGACCTCAGTAAAGGAGAGCACGCTGAGGAAGCCTG...AAATGGAGATGTGTGCTTTTTAATACTGCTCGTCTTCACAGAGAGCACTCGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR-3UTR CCA 90 bp | GGGGAAAAGAGTTCCCAAGAAATAACACGACCACATCTCAGCTTACTGCAAACTTCTTTCCAGCTTCACTaGCTCCAGGAGCGAAGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: GEKSSQEITRPHLSLLQTSFQLH*LQERSD Trigger: GTCACTTCGCTCCTGGAGCCAGTGAAGCTGGAAAGA...AGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTCTTGGGAACTCTTTTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030849.13 ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGGCCAGAGGCAGATGGCCAGTTCCAACAAGACAGACAACTTGGGGCCCAATTTCACCACATTTTGTaGATGAAACATGACCTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: ERPEADGQFQQDRQLGAQFHHIL*MKHDLV Trigger: AACCAGGTCATGTTTCATCCACAAAATGTGGTGAAA...TTGGGCCCCAAGTTGTCTGTCTTGTTGGAACTGGCCATCTGCCTCTGGCCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR-3UTR CCA 90 bp | GGGGAAAAGAGTTCCCAAGAAATAACACGACCACATCTCAGCTTACTGCAAACTCCTCCCGACCGTCTCTaGTTCTTTCCTACACTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: GEKSSQEITRPHLSLLQTPPDRL*FFPTLV Trigger: GACAAGTGTAGGAAAGAACCAGAGACGGTCGGGAGG...AGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTCTTGGGAACTCTTTTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR CAA 90 bp | CTCCAGCTTTGCTTCCTCCCGACCGTCTCTGGTTCTTTCCTACACTaGTCTTGTTACTACAATTGTGACTACTGTTTGATAGACCCGACT | + |
|
Preference number: 2 (lower is better) Translates to: LQLCFLPTVSGSFLH*SCYYNCDYCLIDPT Trigger: AGTCGGGTCTATCAAACAGTAGTCACAATTGTAGTAACAAGACAAGTGTAGGAAAGAACCAGAGACGGTCGGGAGGAAGCAAAGCTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR-3UTR TCA 90 bp | GGGAGAAGGGCTACGTGGGACTGGGGCACCACTGACTTGTTCAAAGGATTTACTTCCATCAGTTCTTCTTaGCCTGTTAATTCTGTATCT | + |
|
Preference number: 2 (lower is better) Translates to: GRRATWDWGTTDLFKGFTSISSS*PVNSVS Trigger: AGATACAGAATTAACAGGTCAAGAAGAACTGATGGA...AGTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGTCCCACGTAGCCCTTCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR-3UTR GCA 90 bp | CCACGAGTGCTCTCTGTGAAGACGAGCAGTATTAAAAAGCACACATCTCCATTTGCACTCTGCAACCCATaGAGCTTTCTCATCTCCATG | + |
|
Preference number: 2 (lower is better) Translates to: PRVLSVKTSSIKKHTSPFALCNP*SFLISM Trigger: CATGGAGATGAGAAAGCTGCATGGGTTGCAGAGTGC...AAATGGAGATGTGTGCTTTTTAATACTGCTCGTCTTCACAGAGAGCACTCGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR-3UTR TCA 90 bp | CTGGGTTTGCTTGCGAGCAAAGTGATCTCTGCAAGACTCCCCTGCAGTTTCTCTTTGTTACTACAATTGTaGCTACTGTTTGATAGACCC | + |
|
Preference number: 2 (lower is better) Translates to: LGLLASKVISARLPCSFSLLLQL*LLFDRP Trigger: GGGTCTATCAAACAGTAGTCACAATTGTAGTAACAA...AGAGAAACTGCAGGGGAGTCTTGCAGAGATCACTTTGCTCGCAAGCAAACCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR-3UTR GCA 90 bp | GGGGAAAAGAGTTCCCAAGAAATAACACGACCACATCTCAGCTTACTGCAAACTGGCATGAAGACTCAGTaGTTTCATAAGGGAGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: GEKSSQEITRPHLSLLQTGMKTQ*FHKGAE Trigger: CTCTGCTCCCTTATGAAAGCACTGAGTCTTCATGCC...AGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTCTTGGGAACTCTTTTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030849.13 ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR-3UTR GCA 90 bp | ACAAATGAGAAGTGGGGATTTGAAATGAGAGTCTCTAAGAAGTCACATGTCAATTCCTGCCAGGCAACTTaGGGTGTGGAGCACACTGTC | + |
|
Preference number: 2 (lower is better) Translates to: TNEKWGFEMRVSKKSHVNSCQAT*GVEHTV Trigger: GACAGTGTGCTCCACACCGCAAGTTGCCTGGCAGGA...ATTGACATGTGACTTCTTAGAGACTCTCATTTCAAATCCCCACTTCTCATTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR-3UTR CCA 90 bp | TCAGTTACAATACTTAGCACAGGCTTCCTCAGCGTGCTCTCCTTTACTGAGGTCACATTTCTTACTGCTTaGTTGGCAGGAATGGGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: SVTILSTGFLSVLSFTEVTFLTA*LAGMGD Trigger: ATCACCCATTCCTGCCAACCAAGCAGTAAGAAATGT...GACCTCAGTAAAGGAGAGCACGCTGAGGAAGCCTGTGCTAAGTATTGTAACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR-3UTR CCA 90 bp | GAAATAACACGACCACATCTCAGCTTACTGCAAACTAGACATTATTCCCTTCATTGGGCAGGGACTGGCTaGAGGTTAAGGTCAGTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: EITRPHLSLLQTRHYSLHWAGTG*RLRSVS Trigger: AGAGACTGACCTTAACCTCCAGCCAGTCCCTGCCCA...ATGAAGGGAATAATGTCTAGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR CAA 90 bp | CTTTCCTGCTTAAACCCGAAGTGTCTGCAGCGCTGGGCTCATTTATaGCCAACAAGAGAGGCAAAAGGTGCTGCATTTTTATTACAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LSCLNPKCLQRWAHL*PTREAKGAAFLLQK Trigger: TTTCTGTAATAAAAATGCAGCACCTTTTGCCTCTCTTGTTGGCAATAAATGAGCCCAGCGCTGCAGACACTTCGGGTTTAAGCAGGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR-3UTR TCA 90 bp | GGACGTGTGTGCAACTGTTCCTCTGTGTCTCATCTAACAGCTCAAGAGCAAAGATTTGTGGATGAAACATaGCCTGGTTTCCTTCATTCA | + |
|
Preference number: 2 (lower is better) Translates to: GRVCNCSSVSHLTAQEQRFVDET*PGFLHS Trigger: TGAATGAAGGAAACCAGGTCATGTTTCATCCACAAA...TCTTTGCTCTTGAGCTGTTAGATGAGACACAGAGGAACAGTTGCACACACGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR-3UTR TCA 90 bp | CTGTCAGTTACAATACTTAGCACAGGCTTCCTCAGCGTGCTCTCCTTTACTGAGCCCCAGGAAATCAATTaGTGTAAATCATTTGGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LSVTILSTGFLSVLSFTEPQEIN*CKSFGA Trigger: TGCTCCAAATGATTTACATCAATTGATTTCCTGGGG...CTCAGTAAAGGAGAGCACGCTGAGGAAGCCTGTGCTAAGTATTGTAACTGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR-3UTR GCA 90 bp | CCACGAGTGCTCTCTGTGAAGACGAGCAGTATTAAAAAGCACACATCTCCATTTTACCACATTTCTTACTaGTTGGTTGGCAGGAATGGG | + |
|
Preference number: 2 (lower is better) Translates to: PRVLSVKTSSIKKHTSPFYHISY*LVGRNG Trigger: CCCATTCCTGCCAACCAAGCAGTAAGAAATGTGGTA...AAATGGAGATGTGTGCTTTTTAATACTGCTCGTCTTCACAGAGAGCACTCGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR-3UTR CCA 90 bp | TCAGTTACAATACTTAGCACAGGCTTCCTCAGCGTGCTCTCCTTTACTGAGGTCGAAACAAATGAGAAGTaGGGATTTGAAATGAGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SVTILSTGFLSVLSFTEVETNEK*GFEMRV Trigger: GACTCTCATTTCAAATCCCCACTTCTCATTTGTTTC...GACCTCAGTAAAGGAGAGCACGCTGAGGAAGCCTGTGCTAAGTATTGTAACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR CAA 90 bp | TCCAGATCACACACTTCAGAAGGTCACCTACCAGCAATCTCACTTTaGCTATTTAATGTTCTAAGGACTGCAACAGAAATTCTCCCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: SRSHTSEGHLPAISL*LFNVLRTATEILPA Trigger: AGCTGGGAGAATTTCTGTTGCAGTCCTTAGAACATTAAATAGCAAAAGTGAGATTGCTGGTAGGTGACCTTCTGAAGTGTGTGATCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR CAA 90 bp | CACAAATGTCCTCTGCCCACACCTACTGTTTTCTTTCACCACATTTaGTGGATGAAACATGACCTGGTTTCCTTCATTCACAGACATTTA | + |
|
Preference number: 2 (lower is better) Translates to: HKCPLPTPTVFFHHI*WMKHDLVSFIHRHL Trigger: TAAATGTCTGTGAATGAAGGAAACCAGGTCATGTTTCATCCACAAAATGTGGTGAAAGAAAACAGTAGGTGTGGGCAGAGGACATTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR-3UTR TCA 90 bp | AGGGCAATGAAACACTACCTTTTCAAAACAAGCCAGTCATTCTGGAATTCCTGCACAACTTCTCACCTTTaGAAGATGAGTAGGAAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: RAMKHYLFKTSQSFWNSCTTSHL*KMSRKV Trigger: CACTTTCCTACTCATCTTTCAAAGGTGAGAAGTTGT...GCAGGAATTCCAGAATGACTGGCTTGTTTTGAAAAGGTAGTGTTTCATTGCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR-3UTR GCA 90 bp | ACAAATGAGAAGTGGGGATTTGAAATGAGAGTCTCTAAGAAGTCACATGTCAATGGCATGAAGACTCAGTaGTTTCATAAGGGAGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: TNEKWGFEMRVSKKSHVNGMKTQ*FHKGAE Trigger: CTCTGCTCCCTTATGAAAGCACTGAGTCTTCATGCC...ATTGACATGTGACTTCTTAGAGACTCTCATTTCAAATCCCCACTTCTCATTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR-3UTR CCA 90 bp | CAAGAACAAACACAAGCTAATGCACAAATGTCCTCTGCCCACACCTACTGTTTTATAAATGCTTCATTCTaGTATCTCGGTAGCTGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: QEQTQANAQMSSAHTYCFINASF*YLGSCA Trigger: AGCACAGCTACCGAGATACCAGAATGAAGCATTTAT...AAAACAGTAGGTGTGGGCAGAGGACATTTGTGCATTAGCTTGTGTTTGTTCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR-3UTR CCA 90 bp | GAAATAACACGACCACATCTCAGCTTACTGCAAACTAGACATTATTCCCTTCATATAAGCTTTTCTTCTTaGAGACTACAGGCAGAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: EITRPHLSLLQTRHYSLHISFSS*RLQAEN Trigger: ATTTTCTGCCTGTAGTCTCCAAGAAGAAAAGCTTAT...ATGAAGGGAATAATGTCTAGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR TCA 72 bp | CCACAGCACGTGCACCTCACAGGAGCGTCAGCCAACTaGGCAGACCACAGGCACCAAGCCTGGGCGTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: PQHVHLTGASAN*ADHRHQAWASI Trigger: GATGGACGCCCAGGCTTGGTGCCTGTGGTCTGCTCAGTTGGCTGACGCTCCTGTGAGGTGCACGTGCTGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR CCA 72 bp | AGCCATGCCAAGGGGCTTTCTCGAGGCTCCAGGAAGTaGAAGGGTAGCAGCACCCGGGCAGCTGGATCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SHAKGLSRGSRK*KGSSTRAAGSS Trigger: AGAGGATCCAGCTGCCCGGGTGCTGCTACCCTTCCACTTCCTGGAGCCTCGAGAAAGCCCCTTGGCATGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR CCA 72 bp | TGGAGCAGCATGGCTTCATGGACTCGCTCCTCCCCCTaGGCTCTACAGCCCAGTCCTCTCACAGACTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: WSSMASWTRSSP*ALQPSPLTDSL Trigger: AAGAGAGTCTGTGAGAGGACTGGGCTGTAGAGCCCAGGGGGAGGAGCGAGTCCATGAAGCCATGCTGCTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR CCA 72 bp | CGTGAGGCTGTTTTCTCACATGCCTGTGGAGCAGCATaGCTTCATGGACTCGCTCCTCCCCCTGGGCTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: REAVFSHACGAA*LHGLAPPPGLY Trigger: GTAGAGCCCAGGGGGAGGAGCGAGTCCATGAAGCCATGCTGCTCCACAGGCATGTGAGAAAACAGCCTCACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR GCA 72 bp | GGCAGCTGGATCCTCTGCTTCTCTCTTCACTTGGATTaGCGAGGTTCATGCCAGGCCCAGTGTCAGAGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: GSWILCFSLHLD*RGSCQAQCQRR Trigger: ACGCCTCTGACACTGGGCCTGGCATGAACCTCGGCAATCCAAGTGAAGAGAGAAGCAGAGGATCCAGCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR CCA 72 bp | TGTTTTCTCACATGCCTGTGGAGCAGCATGGCTTCATaGACTCGCTCCTCCCCCTGGGCTCTACAGCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: CFLTCLWSSMAS*TRSSPWALQPS Trigger: ACTGGGCTGTAGAGCCCAGGGGGAGGAGCGAGTCCATGAAGCCATGCTGCTCCACAGGCATGTGAGAAAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR CCA 72 bp | ACCCGGGCAGCTGGATCCTCTGCTTCTCTCTTCACTTaGATTGCCGAGGTTCATGCCAGGCCCAGTGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TRAAGSSASLFT*IAEVHARPSVR Trigger: TCTGACACTGGGCCTGGCATGAACCTCGGCAATCCAAGTGAAGAGAGAAGCAGAGGATCCAGCTGCCCGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR-3UTR CAA 90 bp | GCCAAGGGGCTTTCTCGAGGCTCCAGGAAGTGGAAGGGTAGCAGCACCCGGGCACTGTGTGGAATCCTCTaGGTAAAAGCTATTCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AKGLSRGSRKWKGSSTRALCGIL*VKAIPL Trigger: CAGAGGAATAGCTTTTACCAAGAGGATTCCACACAG...TGCCCGGGTGCTGCTACCCTTCCACTTCCTGGAGCCTCGAGAAAGCCCCTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR GCA 72 bp | CCCAGGCTCCTGCCAGGACCAGGCATGAAGACTCAGTaGTTTCATAAGGGAGCAGAGCCGTCTTTCCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PRLLPGPGMKTQ*FHKGAEPSFQL Trigger: AAGCTGGAAAGACGGCTCTGCTCCCTTATGAAAGCACTGAGTCTTCATGCCTGGTCCTGGCAGGAGCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030849.13 ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR GCA 72 bp | CTCTGCTTCTCTCTTCACTTGGATTGCCGAGGTTCATaGCAGGCCCAGTGTCAGAGGCGTGCAAGGGTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LCFSLHLDCRGS*QAQCQRRARVE Trigger: CTCAACCCTTGCACGCCTCTGACACTGGGCCTGGCATGAACCTCGGCAATCCAAGTGAAGAGAGAAGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR CCA 72 bp | CGGTGTGGAGCACACTGTCCCATCCTAAGCATGATGTaGTCACAGCTCGTAGCATCCCCACTGCTCTCACGT | + |
|
Preference number: 3 (lower is better) Translates to: RCGAHCPILSMM*SQLVASPLLSR Trigger: ACGTGAGAGCAGTGGGGATGCTACGAGCTGTGACCACATCATGCTTAGGATGGGACAGTGTGCTCCACACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR CCA 72 bp | TCCCCTTGCAACTGTCCTGCCAGGCAACTTGCGGTGTaGAGCACACTGTCCCATCCTAAGCATGATGTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SPCNCPARQLAV*STLSHPKHDVV Trigger: GACCACATCATGCTTAGGATGGGACAGTGTGCTCCACACCGCAAGTTGCCTGGCAGGACAGTTGCAAGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR CCA 72 bp | AAAATCTATTGGCATCTGCTCCAGCAACACAGCCAATaGCGGGAGAAGGGCTACGTGGGACTGGGGCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: KIYWHLLQQHSQ*REKGYVGLGHH Trigger: GTGGTGCCCCAGTCCCACGTAGCCCTTCTCCCGCCATTGGCTGTGTTGCTGGAGCAGATGCCAATAGATTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAGCGAAGTGACAGTTACTCTGCAGACAGAGTGACGCTAATACTAGGAGGTAGTCTTAGCCAGGCCTaGGCTGCTGGGCTTGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QERSDSYSADRVTLILGGSLSQA*AAGLGQ Trigger: CTGCCCAAGCCCAGCAGCCAAGGCCTGGCTAAGACT...ACCTCCTAGTATTAGCGTCACTCTGTCTGCAGAGTAACTGTCACTTCGCTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR TCA 72 bp | TCGCTCTGGGCTCTCTGGGTTTGCTTGCGAGCAAAGTaGTCTCTGCAAGACTCCCCTGCAGTTTCTCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SLWALWVCLRAK*SLQDSPAVSLS Trigger: GGAGAGAGAAACTGCAGGGGAGTCTTGCAGAGATCACTTTGCTCGCAAGCAAACCCAGAGAGCCCAGAGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR GCA 72 bp | CTAAGGACTGCAACAGAAATTCTCCCAGCTTCCCCTTaGAACTGTCCTGCCAGGCAACTTGCGGTGTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LRTATEILPASP*NCPARQLAVWS Trigger: GCTCCACACCGCAAGTTGCCTGGCAGGACAGTTGCAAGGGGAAGCTGGGAGAATTTCTGTTGCAGTCCTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR GCA 72 bp | GGGCTCTCTGGGTTTGCTTGCGAGCAAAGTGATCTCTaGAAGACTCCCCTGCAGTTTCTCTCTCCTTCGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GLSGFACEQSDL*KTPLQFLSPSL Trigger: GAGCGAAGGAGAGAGAAACTGCAGGGGAGTCTTGCAGAGATCACTTTGCTCGCAAGCAAACCCAGAGAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR CCA 72 bp | TCCAGCAACACAGCCAATGGCGGGAGAAGGGCTACGTaGGACTGGGGCACCACTGACTTGTTCAAAGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: SSNTANGGRRAT*DWGTTDLFKGF Trigger: AAATCCTTTGAACAAGTCAGTGGTGCCCCAGTCCCACGTAGCCCTTCTCCCGCCATTGGCTGTGTTGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGGGCACCACTGACTTGTTCAAAGGATTTACTAAATACAGTGGCCGCAGTCTCCTTCGCTCCAGCTTaGCTTCCTCCCGACCGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TGAPLTCSKDLLNTVAAVSFAPA*LPPDRL Trigger: GAGACGGTCGGGAGGAAGCAAAGCTGGAGCGAAGGA...GACTGCGGCCACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR TCA 72 bp | GTGACGCTAATACTAGGAGGTCCCTGCTGGCCGGCTTaGCACTTCACTGCAAGTTCAGTCCTTTCTGACACA | + |
|
Preference number: 3 (lower is better) Translates to: VTLILGGPCWPA*HFTASSVLSDT Trigger: TGTGTCAGAAAGGACTGAACTTGCAGTGAAGTGTCAAGCCGGCCAGCAGGGACCTCCTAGTATTAGCGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR TCA 72 bp | GCCGTCTTTCCAGCTTCACTGGCTCCAGGAGCGAAGTaGCAGTTACTCTGCAGACAGAGTGACGCTAATACT | + |
|
Preference number: 3 (lower is better) Translates to: AVFPASLAPGAK*QLLCRQSDANT Trigger: AGTATTAGCGTCACTCTGTCTGCAGAGTAACTGTCACTTCGCTCCTGGAGCCAGTGAAGCTGGAAAGACGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR CCA 72 bp | TTTCATAAGGGAGCAGAGCCGTCTTTCCAGCTTCACTaGCTCCAGGAGCGAAGTGACAGTTACTCTGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: FHKGAEPSFQLH*LQERSDSYSAD Trigger: GTCTGCAGAGTAACTGTCACTTCGCTCCTGGAGCCAGTGAAGCTGGAAAGACGGCTCTGCTCCCTTATGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR GCA 72 bp | CTGGGCGTCCATCTAGAGGACGCAGAGTTTAGCTTCTaGCTTACCACATTTCTTACTGCTTGGTTGGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LGVHLEDAEFSF*LTTFLTAWLAG Trigger: TCCTGCCAACCAAGCAGTAAGAAATGTGGTAAGGCAGAAGCTAAACTCTGCGTCCTCTAGATGGACGCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR GCA 72 bp | TCTCATCTAACAGCTCAAGAGCAAAGAGGGCTTTCCTaGTTAAACCCGAAGTGTCTGCAGCGCTGGGCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SHLTAQEQRGLS*LNPKCLQRWAH Trigger: ATGAGCCCAGCGCTGCAGACACTTCGGGTTTAAGCAGGAAAGCCCTCTTTGCTCTTGAGCTGTTAGATGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR GCA 72 bp | TGTCAGTTACAATACTTAGCACAGGCTTCCTCAGCGTaGTCTCCTTTACTGAGGTCTCATGTGCCCACGGGT | + |
|
Preference number: 3 (lower is better) Translates to: CQLQYLAQASSA*SPLLRSHVPTG Trigger: ACCCGTGGGCACATGAGACCTCAGTAAAGGAGAGCACGCTGAGGAAGCCTGTGCTAAGTATTGTAACTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR CCA 72 bp | AACACAGCCAATGGCGGGAGAAGGGCTACGTGGGACTaGGGCACCACTGACTTGTTCAAAGGATTTACTAAA | + |
|
Preference number: 3 (lower is better) Translates to: NTANGGRRATWD*GTTDLFKGFTK Trigger: TTTAGTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGTCCCACGTAGCCCTTCTCCCGCCATTGGCTGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAATCTATTGGCATCTGCTCCAGCAACACAGCCAATGGCGGGAGAAGGGCTAATTGTGACTACTGTTaGATAGACCCGACTGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RKSIGICSSNTANGGRRANCDYC*IDPTGW Trigger: CCAGCCAGTCGGGTCTATCAAACAGTAGTCACAATT...AGCCCTTCTCCCGCCATTGGCTGTGTTGCTGGAGCAGATGCCAATAGATTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR-3UTR CAA 90 bp | GAGCGAAGTGACAGTTACTCTGCAGACAGAGTGACGCTAATACTAGGAGGTCCCAATTGTGACTACTGTTaGATAGACCCGACTGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ERSDSYSADRVTLILGGPNCDYC*IDPTGW Trigger: CCAGCCAGTCGGGTCTATCAAACAGTAGTCACAATT...GGGACCTCCTAGTATTAGCGTCACTCTGTCTGCAGAGTAACTGTCACTTCGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR CCA 72 bp | GATTTCCAGAGCAGCACAGCCCAACAGCTTTGTGGCTaGTTACACTTTAGACACCGAAAGGGACTTTCATGC | + |
|
Preference number: 3 (lower is better) Translates to: DFQSSTAQQLCG*LHFRHRKGLSC Trigger: GCATGAAAGTCCCTTTCGGTGTCTAAAGTGTAACCAGCCACAAAGCTGTTGGGCTGTGCTGCTCTGGAAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR CCA 72 bp | TCCTTCGCTCCAGCTTTGCTTCCTCCCGACCGTCTCTaGTTCTTTCCTACACTTGTCTTGTTACTACAATTG | + |
|
Preference number: 3 (lower is better) Translates to: SFAPALLPPDRL*FFPTLVLLLQL Trigger: CAATTGTAGTAACAAGACAAGTGTAGGAAAGAACCAGAGACGGTCGGGAGGAAGCAAAGCTGGAGCGAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR-3UTR CAA 90 bp | GAGCGAAGTGACAGTTACTCTGCAGACAGAGTGACGCTAATACTAGGAGGTCCCTGGGGCACCACTGACTaGTTCAAAGGATTTACTAAA | + |
|
Preference number: 3 (lower is better) Translates to: ERSDSYSADRVTLILGGPWGTTD*FKGFTK Trigger: TTTAGTAAATCCTTTGAACAAGTCAGTGGTGCCCCA...GGGACCTCCTAGTATTAGCGTCACTCTGTCTGCAGAGTAACTGTCACTTCGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR TCA 72 bp | TACAAAGTACAGAAGGCAGCCCACGAGTGCTCTCTGTaGAGACGAGCAGTATTAAAAAGCACACATCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: YKVQKAAHECSL*RRAVLKSTHLH Trigger: ATGGAGATGTGTGCTTTTTAATACTGCTCGTCTTCACAGAGAGCACTCGTGGGCTGCCTTCTGTACTTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR CCA 72 bp | TGCACTGTGCAAGCTGTTACAGAATTTGTAAGAGGATaGACGTGTGTGCAACTGTTCCTCTGTGTCTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: CTVQAVTEFVRG*TCVQLFLCVSS Trigger: AGATGAGACACAGAGGAACAGTTGCACACACGTCCATCCTCTTACAAATTCTGTAACAGCTTGCACAGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR TCA 72 bp | TTTCTTTCTCCTGTCACACCAGGAAACCCAGCTAGATaGGCCCGAGGTTTAATGCAAAACGAAAAGATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: FLSPVTPGNPAR*ARGLMQNEKIP Trigger: TGGAATCTTTTCGTTTTGCATTAAACCTCGGGCTCATCTAGCTGGGTTTCCTGGTGTGACAGGAGAAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
||
| 3UTR TCA 72 bp | TGGTTCTTTCCTACACTTGTCTTGTTACTACAATTGTaGCTACTGTTTGATAGACCCGACTGGCTGGTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: WFFPTLVLLLQL*LLFDRPDWLVL Trigger: TAGCACCAGCCAGTCGGGTCTATCAAACAGTAGTCACAATTGTAGTAACAAGACAAGTGTAGGAAAGAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR-3UTR CAA 90 bp | GAAATAACACGACCACATCTCAGCTTACTGCAAACTAGACATTATTCCCTTCATTCTCACAGACTCTCTTaGACTTCCCAGGGCAAATAC | + |
|
Preference number: 3 (lower is better) Translates to: EITRPHLSLLQTRHYSLHSHRLS*TSQGKY Trigger: GTATTTGCCCTGGGAAGTCAAAGAGAGTCTGTGAGA...ATGAAGGGAATAATGTCTAGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR TCA 72 bp | GAAACAAGCCTACAAAGCCACACAACTTCTCACCTTTaGAAGATGAGTAGGAAAGTGACTAGAACAGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ETSLQSHTTSHL*KMSRKVTRTAV Trigger: AACAGCTGTTCTAGTCACTTTCCTACTCATCTTTCAAAGGTGAGAAGTTGTGTGGCTTTGTAGGCTTGTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR CCA 72 bp | GCCTTACCACATTTCTTACTGCTTGGTTGGCAGGAATaGGTGATAGCTGAATTCTTTCTACAACATAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: ALPHFLLLGWQE*VIAEFFLQHNK Trigger: CTTGTTATGTTGTAGAAAGAATTCAGCTATCACCCATTCCTGCCAACCAAGCAGTAAGAAATGTGGTAAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR CCA 72 bp | TTAGCTTCTGCCTTACCACATTTCTTACTGCTTGGTTaGCAGGAATGGGTGATAGCTGAATTCTTTCTACAA | + |
|
Preference number: 3 (lower is better) Translates to: LASALPHFLLLG*QEWVIAEFFLQ Trigger: TTGTAGAAAGAATTCAGCTATCACCCATTCCTGCCAACCAAGCAGTAAGAAATGTGGTAAGGCAGAAGCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR-3UTR CAA 90 bp | GAAATAACACGACCACATCTCAGCTTACTGCAAACTAGACATTATTCCCTTCATTGGGGCACCACTGACTaGTTCAAAGGATTTACTAAA | + |
|
Preference number: 3 (lower is better) Translates to: EITRPHLSLLQTRHYSLHWGTTD*FKGFTK Trigger: TTTAGTAAATCCTTTGAACAAGTCAGTGGTGCCCCA...ATGAAGGGAATAATGTCTAGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR TCA 72 bp | CCACACCTACTGTTTTCTTTCACCACATTTTGTGGATaGAACATGACCTGGTTTCCTTCATTCACAGACATT | + |
|
Preference number: 3 (lower is better) Translates to: PHLLFSFTTFCG*NMTWFPSFTDI Trigger: AATGTCTGTGAATGAAGGAAACCAGGTCATGTTTCATCCACAAAATGTGGTGAAAGAAAACAGTAGGTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR TCA 72 bp | GGAATCCTCTTGGTAAAAGCTATTCCTCTGGATCCATaGGATGACTACACTAGCATCTTAATAGAAACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: GILLVKAIPLDP*DDYTSILIETS Trigger: GCTTGTTTCTATTAAGATGCTAGTGTAGTCATCTCATGGATCCAGAGGAATAGCTTTTACCAAGAGGATTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR TCA 72 bp | AGGAAATCAATTGATGTAAATCATTTGGAGCAAACTTaGGACTCATTGCACTGTGCAAGCTGTTACAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: RKSIDVNHLEQT*DSLHCASCYRI Trigger: AATTCTGTAACAGCTTGCACAGTGCAATGAGTCTCAAGTTTGCTCCAAATGATTTACATCAATTGATTTCCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR CCA 72 bp | TGTCTACAACAATATCAAAATGAGGTTTCAATATGGTaGCTGAACATTATTCTGATCTCTTGTTTGTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CLQQYQNEVSIW*LNIILISCLCQ Trigger: CTGGCACAAACAAGAGATCAGAATAATGTTCAGCCACCATATTGAAACCTCATTTTGATATTGTTGTAGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR CCA 72 bp | AGTTTTATTAAGATACTAGGTGATACCAGTGGTCTTTaGACCACACAAGTAGCAAATGTCTACAACAATATC | + |
|
Preference number: 3 (lower is better) Translates to: SFIKILGDTSGL*TTQVANVYNNI Trigger: GATATTGTTGTAGACATTTGCTACTTGTGTGGTCCAAAGACCACTGGTATCACCTAGTATCTTAATAAAACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR CCA 90 bp | CTCGAGGCTCCAGGAAGTGGAAGGGTAGCAGCACCCGGGCAGCTGGATCCTCTGCCAGGCCTTGGCTGCTaGGCTTGGGCAGGGACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LEAPGSGRVAAPGQLDPLPGLGC*AWAGTG Trigger: GCCAGTCCCTGCCCAAGCCCAGCAGCCAAGGCCTGG...CAGAGGATCCAGCTGCCCGGGTGCTGCTACCCTTCCACTTCCTGGAGCCTCGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR CCA 90 bp | CTTAAAGGGGTCAGGCCGTGTCCCAGCCATGCCAAGGGGCTTTCTCGAGGCTCCGTCTTAGCCAGGCCTTaGCTGCTGGGCTTGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKGVRPCPSHAKGLSRGSVLARP*LLGLGR Trigger: CCTGCCCAAGCCCAGCAGCCAAGGCCTGGCTAAGAC...GGAGCCTCGAGAAAGCCCCTTGGCATGGCTGGGACACGGCCTGACCCCTTTAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR CCA 90 bp | CTCGAGGCTCCAGGAAGTGGAAGGGTAGCAGCACCCGGGCAGCTGGATCCTCTGAGGGCTACGTGGGACTaGGGCACCACTGACTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LEAPGSGRVAAPGQLDPLRATWD*GTTDLF Trigger: GAACAAGTCAGTGGTGCCCCAGTCCCACGTAGCCCT...CAGAGGATCCAGCTGCCCGGGTGCTGCTACCCTTCCACTTCCTGGAGCCTCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR CAA 72 bp | GGGCAGCTGGATCCTCTGCTTCTCTCTTCACTTGGATaGCCGAGGTTCATGCCAGGCCCAGTGTCAGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GQLDPLLLSSLG*PRFMPGPVSEA Trigger: CGCCTCTGACACTGGGCCTGGCATGAACCTCGGCAATCCAAGTGAAGAGAGAAGCAGAGGATCCAGCTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR CAA 72 bp | CACCCGGGCAGCTGGATCCTCTGCTTCTCTCTTCACTaGGATTGCCGAGGTTCATGCCAGGCCCAGTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HPGSWILCFSLH*DCRGSCQAQCQ Trigger: CTGACACTGGGCCTGGCATGAACCTCGGCAATCCAAGTGAAGAGAGAAGCAGAGGATCCAGCTGCCCGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR GCA 90 bp | CTCGAGGCTCCAGGAAGTGGAAGGGTAGCAGCACCCGGGCAGCTGGATCCTCTGCTCTCTGGGTTTGCTTaGGAGCAAAGTGATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEAPGSGRVAAPGQLDPLLSGFA*EQSDLC Trigger: GCAGAGATCACTTTGCTCGCAAGCAAACCCAGAGAG...CAGAGGATCCAGCTGCCCGGGTGCTGCTACCCTTCCACTTCCTGGAGCCTCGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR CAA 72 bp | TCCCAGCTTCCCCTTGCAACTGTCCTGCCAGGCAACTaGCGGTGTGGAGCACACTGTCCCATCCTAAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SQLPLATVLPGN*RCGAHCPILSM Trigger: CATGCTTAGGATGGGACAGTGTGCTCCACACCGCAAGTTGCCTGGCAGGACAGTTGCAAGGGGAAGCTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR TCA 90 bp | CTTAAAGGGGTCAGGCCGTGTCCCAGCCATGCCAAGGGGCTTTCTCGAGGCTCCTCATCCAGTGCTTTCTaGGCTAGATCCCATTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKGVRPCPSHAKGLSRGSSSSAF*ARSHSP Trigger: TGGAGAATGGGATCTAGCTCAGAAAGCACTGGATGA...GGAGCCTCGAGAAAGCCCCTTGGCATGGCTGGGACACGGCCTGACCCCTTTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR TCA 90 bp | TCATGCCCCAGTGTAGCACCACAGCACGTGCACCTCACAGGAGCGTCAGCCAACGGACTGGGGCACCACTaGCTTGTTCAAAGGATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SCPSVAPQHVHLTGASANGLGHH*LVQRIY Trigger: GTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGTCC...GTTGGCTGACGCTCCTGTGAGGTGCACGTGCTGTGGTGCTACACTGGGGCATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR TCA 90 bp | TCATGCCCCAGTGTAGCACCACAGCACGTGCACCTCACAGGAGCGTCAGCCAACGGTGTGATCTCCACTTaGATACACCTTGTACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SCPSVAPQHVHLTGASANGVIST*IHLVPS Trigger: GGAAGGTACAAGGTGTATTCAAGTGGAGATCACACC...GTTGGCTGACGCTCCTGTGAGGTGCACGTGCTGTGGTGCTACACTGGGGCATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR TCA 90 bp | CTCCTTCGCTCCAGCTTTGCTTCCTCCCGACCGTCTCTGGTTCTTTCCTACACTCAGATTTTTGCCTCCTaGGTTCGGGCAAGCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLRSSFASSRPSLVLSYTQIFAS*VRASLC Trigger: GCAGAGGCTTGCCCGAACTCAGGAGGCAAAAATCTG...AGTGTAGGAAAGAACCAGAGACGGTCGGGAGGAAGCAAAGCTGGAGCGAAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR CAA 72 bp | GAGAAGCTCAAGGTTCTCGCTCTGGGCTCTCTGGGTTaGCTTGCGAGCAAAGTGATCTCTGCAAGACTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: EKLKVLALGSLG*LASKVISARLP Trigger: GGGGAGTCTTGCAGAGATCACTTTGCTCGCAAGCAAACCCAGAGAGCCCAGAGCGAGAACCTTGAGCTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR GCA 90 bp | CAGGAGCGAAGTGACAGTTACTCTGCAGACAGAGTGACGCTAATACTAGGAGGTATGCAGCCGCTGCTGTaGACATCTCTGCTGGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: QERSDSYSADRVTLILGGMQPLL*TSLLAD Trigger: GTCGGCCAGCAGAGATGTGCACAGCAGCGGCTGCAT...ACCTCCTAGTATTAGCGTCACTCTGTCTGCAGAGTAACTGTCACTTCGCTCCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR GCA 90 bp | GCGGGAGAAGGGCTACGTGGGACTGGGGCACCACTGACTTGTTCAAAGGATTTATGTCTCCTAGAGCTCTaGCTTTTTCCCCATTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AGEGLRGTGAPLTCSKDLCLLEL*LFPHSR Trigger: CCGGGAATGGGGAAAAAGGCAGAGCTCTAGGAGACA...TAAATCCTTTGAACAAGTCAGTGGTGCCCCAGTCCCACGTAGCCCTTCTCCCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR GCA 90 bp | TCTCCTTCGCTCCAGCTTTGCTTCCTCCCGACCGTCTCTGGTTCTTTCCTACACTGCACACCCTGCATATaGTGGGCGTCAATGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPSLQLCFLPTVSGSFLHCTPCI*WASMSP Trigger: AGGAGACATTGACGCCCAGCATATGCAGGGTGTGCA...GTGTAGGAAAGAACCAGAGACGGTCGGGAGGAAGCAAAGCTGGAGCGAAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR CCA 90 bp | GAAAGGCCAGAGGCAGATGGCCAGTTCCAACAAGACAGACAACTTGGGGCCCAACCTCCCGACCGTCTCTaGTTCTTTCCTACACTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ERPEADGQFQQDRQLGAQPPDRL*FFPTLV Trigger: GACAAGTGTAGGAAAGAACCAGAGACGGTCGGGAGG...TTGGGCCCCAAGTTGTCTGTCTTGTTGGAACTGGCCATCTGCCTCTGGCCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR CCA 90 bp | GAAAGGCCAGAGGCAGATGGCCAGTTCCAACAAGACAGACAACTTGGGGCCCAATCAAGGTTCTCGCTCTaGGCTCTCTGGGTTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ERPEADGQFQQDRQLGAQSRFSL*ALWVCL Trigger: CAAGCAAACCCAGAGAGCCCAGAGCGAGAACCTTGA...TTGGGCCCCAAGTTGTCTGTCTTGTTGGAACTGGCCATCTGCCTCTGGCCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| 3UTR CAA 72 bp | TCTAAGGACTGCAACAGAAATTCTCCCAGCTTCCCCTaGCAACTGTCCTGCCAGGCAACTTGCGGTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SKDCNRNSPSFP*QLSCQATCGVE Trigger: CTCCACACCGCAAGTTGCCTGGCAGGACAGTTGCAAGGGGAAGCTGGGAGAATTTCTGTTGCAGTCCTTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR GCA 90 bp | AAGCTCAAGGTTCTCGCTCTGGGCTCTCTGGGTTTGCTTGCGAGCAAAGTGATCGTTTCCTGCACACCCTaGATATGCTGGGCGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: KLKVLALGSLGLLASKVIVSCTP*ICWASM Trigger: CATTGACGCCCAGCATATGCAGGGTGTGCAGGAAAC...GATCACTTTGCTCGCAAGCAAACCCAGAGAGCCCAGAGCGAGAACCTTGAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR CCA 90 bp | AAGCTCAAGGTTCTCGCTCTGGGCTCTCTGGGTTTGCTTGCGAGCAAAGTGATCGCACTCTGCCAGCTGTaGACATTCCATCCTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KLKVLALGSLGLLASKVIALCQL*TFHPPS Trigger: TGATGGAGGATGGAATGTCCACAGCTGGCAGAGTGC...GATCACTTTGCTCGCAAGCAAACCCAGAGAGCCCAGAGCGAGAACCTTGAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR CAA 72 bp | GGGAGAAGGGCTACGTGGGACTGGGGCACCACTGACTaGTTCAAAGGATTTACTAAATACAGTGGCCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GRRATWDWGTTD*FKGFTKYSGRS Trigger: ACTGCGGCCACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGTCCCACGTAGCCCTTCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR TCA 90 bp | TCTCCTTCGCTCCAGCTTTGCTTCCTCCCGACCGTCTCTGGTTCTTTCCTACACACAAATCTGACACAGTaGCTGAAGAGAGACACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPSLQLCFLPTVSGSFLHTNLTQ*LKRDTG Trigger: CCCAGTGTCTCTCTTCAGTCACTGTGTCAGATTTGT...GTGTAGGAAAGAACCAGAGACGGTCGGGAGGAAGCAAAGCTGGAGCGAAGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR TCA 90 bp | CTCCTTCGCTCCAGCTTTGCTTCCTCCCGACCGTCTCTGGTTCTTTCCTACACTGGCACCATGAGGCAATaGAGCCTTTATTGCATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLRSSFASSRPSLVLSYTGTMRQ*SLYCIS Trigger: GCTAATGCAATAAAGGCTTCATTGCCTCATGGTGCC...AGTGTAGGAAAGAACCAGAGACGGTCGGGAGGAAGCAAAGCTGGAGCGAAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR TCA 90 bp | TCAAAGGATTTACTAAATACAGTGGCCGCAGTCTTAGCCAGGCCTTGGCTGCTGCAGATTTTTGCCTCCTaGGTTCGGGCAAGCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKDLLNTVAAVLARPWLLQIFAS*VRASLC Trigger: GCAGAGGCTTGCCCGAACTCAGGAGGCAAAAATCTG...CAGCAGCCAAGGCCTGGCTAAGACTGCGGCCACTGTATTTAGTAAATCCTTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR CCA 90 bp | AAGTGTCTGCAGCGCTGGGCTCATTTATTGCCAACAAGAGAGGCAAAAGGTGCTTGGGCAGGGACTGGCTaGAGGTTAAGGTCAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KCLQRWAHLLPTREAKGAWAGTG*RLRSVS Trigger: AGAGACTGACCTTAACCTCCAGCCAGTCCCTGCCCA...AGCACCTTTTGCCTCTCTTGTTGGCAATAAATGAGCCCAGCGCTGCAGACACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR TCA 90 bp | CAGGCTTCCTCAGCGTGCTCTCCTTTACTGAGGTCTCATGTGCCCACGGGTGTAGGTAACTGCATTTCTTaGTATTCTAGAGGAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QASSACSPLLRSHVPTGVGNCIS*YSRGGW Trigger: CCAACCTCCTCTAGAATATCAAGAAATGCAGTTACC...TACACCCGTGGGCACATGAGACCTCAGTAAAGGAGAGCACGCTGAGGAAGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR TCA 90 bp | GATTTACTAAATACAGTGGCCGCAGTCTTAGCCAGGCCTTGGCTGCTGGGCTTGTGTCTTTTCCACCTGTaGCCTCGTATTGACATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DLLNTVAAVLARPWLLGLCLFHL*PRIDML Trigger: CAGCATGTCAATACGAGGTCACAGGTGGAAAAGACA...CAAGCCCAGCAGCCAAGGCCTGGCTAAGACTGCGGCCACTGTATTTAGTAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR GCA 90 bp | GGGGAAAAGAGTTCCCAAGAAATAACACGACCACATCTCAGCTTACTGCAAACTATGCAGCCGCTGCTGTaGACATCTCTGCTGGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: GEKSSQEITRPHLSLLQTMQPLL*TSLLAD Trigger: GTCGGCCAGCAGAGATGTGCACAGCAGCGGCTGCAT...AGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTCTTGGGAACTCTTTTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030849.13 ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR GCA 90 bp | CGTGGGACTGGGGCACCACTGACTTGTTCAAAGGATTTACTAAATACAGTGGCCTGTCTCCTAGAGCTCTaGCTTTTTCCCCATTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RGTGAPLTCSKDLLNTVACLLEL*LFPHSR Trigger: CCGGGAATGGGGAAAAAGGCAGAGCTCTAGGAGACA...GGCCACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGTCCCACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR CCA 90 bp | GAAAGGCCAGAGGCAGATGGCCAGTTCCAACAAGACAGACAACTTGGGGCCCAAAGGCAGAAAATCTATTaGCATCTGCTCCAGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: ERPEADGQFQQDRQLGAQRQKIY*HLLQQH Trigger: GTGTTGCTGGAGCAGATGCCAATAGATTTTCTGCCT...TTGGGCCCCAAGTTGTCTGTCTTGTTGGAACTGGCCATCTGCCTCTGGCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR TCA 90 bp | GGGGAAAAGAGTTCCCAAGAAATAACACGACCACATCTCAGCTTACTGCAAACTGTCAGCATCTCCCGTTaGGGATGGGGTCCACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GEKSSQEITRPHLSLLQTVSISR*GWGPLY Trigger: GTACAGTGGACCCCATCCTCAACGGGAGATGCTGAC...AGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTCTTGGGAACTCTTTTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030849.13 ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR TCA 90 bp | AGAAAATCTATTGGCATCTGCTCCAGCAACACAGCCAATGGCGGGAGAAGGGCTACAAATCTGACACAGTaGCTGAAGAGAGACACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RKSIGICSSNTANGGRRATNLTQ*LKRDTG Trigger: CCCAGTGTCTCTCTTCAGTCACTGTGTCAGATTTGT...AGCCCTTCTCCCGCCATTGGCTGTGTTGCTGGAGCAGATGCCAATAGATTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR TCA 90 bp | AAAGGATTTACTAAATACAGTGGCCGCAGTCTTAGCCAGGCCTTGGCTGCTGGGGGTGTGATCTCCACTTaGATACACCTTGTACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGFTKYSGRSLSQALAAGGVIST*IHLVPS Trigger: GGAAGGTACAAGGTGTATTCAAGTGGAGATCACACC...CCCAGCAGCCAAGGCCTGGCTAAGACTGCGGCCACTGTATTTAGTAAATCCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR TCA 90 bp | AGTGACAGTTACTCTGCAGACAGAGTGACGCTAATACTAGGAGGTCCCTGCTGGTGTCTTTTCCACCTGTaGCCTCGTATTGACATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SDSYSADRVTLILGGPCWCLFHL*PRIDML Trigger: CAGCATGTCAATACGAGGTCACAGGTGGAAAAGACA...CCAGCAGGGACCTCCTAGTATTAGCGTCACTCTGTCTGCAGAGTAACTGTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR GCA 90 bp | CAAGAACAAACACAAGCTAATGCACAAATGTCCTCTGCCCACACCTACTGTTTTATGCAGCCGCTGCTGTaGACATCTCTGCTGGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: QEQTQANAQMSSAHTYCFMQPLL*TSLLAD Trigger: GTCGGCCAGCAGAGATGTGCACAGCAGCGGCTGCAT...AAAACAGTAGGTGTGGGCAGAGGACATTTGTGCATTAGCTTGTGTTTGTTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR GCA 90 bp | CTGTCAGTTACAATACTTAGCACAGGCTTCCTCAGCGTGCTCTCCTTTACTGAGTCTGCAAGACTCCCCTaGAGTTTCTCTCTCCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSVTILSTGFLSVLSFTESARLP*SFSLLR Trigger: GCGAAGGAGAGAGAAACTGCAGGGGAGTCTTGCAGA...CTCAGTAAAGGAGAGCACGCTGAGGAAGCCTGTGCTAAGTATTGTAACTGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR CCA 90 bp | GAAATAACACGACCACATCTCAGCTTACTGCAAACTAGACATTATTCCCTTCATCTTGGCTGCTGGGCTTaGGCAGGGACTGGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EITRPHLSLLQTRHYSLHLGCWA*AGTGWR Trigger: CCTCCAGCCAGTCCCTGCCCAAGCCCAGCAGCCAAG...ATGAAGGGAATAATGTCTAGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR TCA 90 bp | CGTGGGACTGGGGCACCACTGACTTGTTCAAAGGATTTACTAAATACAGTGGCCGGTGTGATCTCCACTTaGATACACCTTGTACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGTGAPLTCSKDLLNTVAGVIST*IHLVPS Trigger: GGAAGGTACAAGGTGTATTCAAGTGGAGATCACACC...GGCCACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGTCCCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR TCA 90 bp | TTCAGAGAGAGAAGCTCAAGGTTCTCGCTCTGGGCTCTCTGGGTTTGCTTGCGAGGTAACTGCATTTCTTaGTATTCTAGAGGAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FRERSSRFSLWALWVCLRGNCIS*YSRGGW Trigger: CCAACCTCCTCTAGAATATCAAGAAATGCAGTTACC...TCGCAAGCAAACCCAGAGAGCCCAGAGCGAGAACCTTGAGCTTCTCTCTCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR TCA 90 bp | GGGAGAAGGGCTACGTGGGACTGGGGCACCACTGACTTGTTCAAAGGATTTACTGGTAACTGCATTTCTTaGTATTCTAGAGGAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRRATWDWGTTDLFKGFTGNCIS*YSRGGW Trigger: CCAACCTCCTCTAGAATATCAAGAAATGCAGTTACC...AGTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGTCCCACGTAGCCCTTCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR CCA 90 bp | CGTGGGACTGGGGCACCACTGACTTGTTCAAAGGATTTACTAAATACAGTGGCCACTGAAGAGAGACACTaGGCATGTAGGTTAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGTGAPLTCSKDLLNTVATEERH*ACRLRQ Trigger: CTGCCTTAACCTACATGCCCAGTGTCTCTCTTCAGT...GGCCACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGTCCCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR CCA 90 bp | CCACGAGTGCTCTCTGTGAAGACGAGCAGTATTAAAAAGCACACATCTCCATTTTTTGATAGACCCGACTaGCTGGTGCTAGACGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRVLSVKTSSIKKHTSPFFDRPD*LVLDAA Trigger: GGCTGCGTCTAGCACCAGCCAGTCGGGTCTATCAAA...AAATGGAGATGTGTGCTTTTTAATACTGCTCGTCTTCACAGAGAGCACTCGTGG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR TCA 90 bp | ACTGGGGCACCACTGACTTGTTCAAAGGATTTACTAAATACAGTGGCCGCAGTCTCATCCAGTGCTTTCTaGGCTAGATCCCATTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGAPLTCSKDLLNTVAAVSSSAF*ARSHSP Trigger: TGGAGAATGGGATCTAGCTCAGAAAGCACTGGATGA...GACTGCGGCCACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR TCA 90 bp | CTGGGTTTGCTTGCGAGCAAAGTGATCTCTGCAAGACTCCCCTGCAGTTTCTCTGATTTCATGGCACCATaGGGCAATGAAGCCTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: LGLLASKVISARLPCSFSDFMAP*GNEAFI Trigger: AATAAAGGCTTCATTGCCTCATGGTGCCATGAAATC...AGAGAAACTGCAGGGGAGTCTTGCAGAGATCACTTTGCTCGCAAGCAAACCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR GCA 90 bp | AACGAAAAGATTCCAAGTTCTTCAAAATTGGCATCCTTAGAGCTGTCATCTTGCATGCAGCCGCTGCTGTaGACATCTCTGCTGGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: NEKIPSSSKLASLELSSCMQPLL*TSLLAD Trigger: GTCGGCCAGCAGAGATGTGCACAGCAGCGGCTGCAT...GCAAGATGACAGCTCTAAGGATGCCAATTTTGAAGAACTTGGAATCTTTTCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
||
| CDS-3UTR GCA 90 bp | AAAGGATTTACTAAATACAGTGGCCGCAGTCTTAGCCAGGCCTTGGCTGCTGGGATGAAATCGGTATCCTaGTGCTCACACCTCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: KGFTKYSGRSLSQALAAGMKSVS*CSHLCI Trigger: AATACAGAGGTGTGAGCAGCAGGATACCGATTTCAT...CCCAGCAGCCAAGGCCTGGCTAAGACTGCGGCCACTGTATTTAGTAAATCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR GCA 90 bp | GGGGAAAAGAGTTCCCAAGAAATAACACGACCACATCTCAGCTTACTGCAAACTTGCACACCCTGCATATaGTGGGCGTCAATGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GEKSSQEITRPHLSLLQTCTPCI*WASMSP Trigger: AGGAGACATTGACGCCCAGCATATGCAGGGTGTGCA...AGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTCTTGGGAACTCTTTTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR CCA 90 bp | GGTGCTAGACGCAGCCCTGGAATAAAATCCCTCGTCAACTTCAGTTATGTCCATACTGAAGAGAGACACTaGGCATGTAGGTTAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GARRSPGIKSLVNFSYVHTEERH*ACRLRQ Trigger: CTGCCTTAACCTACATGCCCAGTGTCTCTCTTCAGT...ATGGACATAACTGAAGTTGACGAGGGATTTTATTCCAGGGCTGCGTCTAGCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR TCA 90 bp | CTGGGTTTGCTTGCGAGCAAAGTGATCTCTGCAAGACTCCCCTGCAGTTTCTCTATGCTGGAAGGTTCATaGTATACAGATGGTTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LGLLASKVISARLPCSFSMLEGS*YTDGLD Trigger: ATCCAAACCATCTGTATATCATGAACCTTCCAGCAT...AGAGAAACTGCAGGGGAGTCTTGCAGAGATCACTTTGCTCGCAAGCAAACCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR TCA 90 bp | CGTGGGACTGGGGCACCACTGACTTGTTCAAAGGATTTACTAAATACAGTGGCCATGCTGGAAGGTTCATaGTATACAGATGGTTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGTGAPLTCSKDLLNTVAMLEGS*YTDGLD Trigger: ATCCAAACCATCTGTATATCATGAACCTTCCAGCAT...GGCCACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGTCCCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR TCA 90 bp | GGGGAAAAGAGTTCCCAAGAAATAACACGACCACATCTCAGCTTACTGCAAACTGGCACCATGAGGCAATaGAGCCTTTATTGCATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GEKSSQEITRPHLSLLQTGTMRQ*SLYCIS Trigger: GCTAATGCAATAAAGGCTTCATTGCCTCATGGTGCC...AGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTCTTGGGAACTCTTTTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030849.13 ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR GCA 90 bp | GAAGCCATATTTTATTACTGTTTCTTTCTCCTGTCACACCAGGAAACCCAGCTATCTGCCGACTGCCCTTaGTTCCTCCATGTCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EAIFYYCFFLLSHQETQLSADCP*FLHVFS Trigger: GGAAAAGACATGGAGGAAGCAAGGGCAGTCGGCAGA...TAGCTGGGTTTCCTGGTGTGACAGGAGAAAGAAACAGTAATAAAATATGGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
||
| CDS-3UTR CCA 90 bp | CCGTCTCTGGTTCTTTCCTACACTTGTCTTGTTACTACAATTGTGACTACTGTTGCACTCTGCCAGCTGTaGACATTCCATCCTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PSLVLSYTCLVTTIVTTVALCQL*TFHPPS Trigger: TGATGGAGGATGGAATGTCCACAGCTGGCAGAGTGC...AACAGTAGTCACAATTGTAGTAACAAGACAAGTGTAGGAAAGAACCAGAGACGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR TCA 90 bp | GGACGTGTGTGCAACTGTTCCTCTGTGTCTCATCTAACAGCTCAAGAGCAAAGAATGCTGGAAGGTTCATaGTATACAGATGGTTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GRVCNCSSVSHLTAQEQRMLEGS*YTDGLD Trigger: ATCCAAACCATCTGTATATCATGAACCTTCCAGCAT...TCTTTGCTCTTGAGCTGTTAGATGAGACACAGAGGAACAGTTGCACACACGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR TCA 90 bp | CAAGAACAAACACAAGCTAATGCACAAATGTCCTCTGCCCACACCTACTGTTTTACAAATCTGACACAGTaGCTGAAGAGAGACACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QEQTQANAQMSSAHTYCFTNLTQ*LKRDTG Trigger: CCCAGTGTCTCTCTTCAGTCACTGTGTCAGATTTGT...AAAACAGTAGGTGTGGGCAGAGGACATTTGTGCATTAGCTTGTGTTTGTTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR TCA 90 bp | AGGGCAATGAAACACTACCTTTTCAAAACAAGCCAGTCATTCTGGAATTCCTGCGGCACCATGAGGCAATaGAGCCTTTATTGCATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RAMKHYLFKTSQSFWNSCGTMRQ*SLYCIS Trigger: GCTAATGCAATAAAGGCTTCATTGCCTCATGGTGCC...GCAGGAATTCCAGAATGACTGGCTTGTTTTGAAAAGGTAGTGTTTCATTGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR GCA 90 bp | AGGGCAATGAAACACTACCTTTTCAAAACAAGCCAGTCATTCTGGAATTCCTGCTTCAAACCTGTTCTGTaGTGTCAGCATCTCCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RAMKHYLFKTSQSFWNSCFKPVL*CQHLPL Trigger: CAACGGGAGATGCTGACAGCACAGAACAGGTTTGAA...GCAGGAATTCCAGAATGACTGGCTTGTTTTGAAAAGGTAGTGTTTCATTGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR GCA 90 bp | GAAATAACACGACCACATCTCAGCTTACTGCAAACTAGACATTATTCCCTTCATGTTTCCTGCACACCCTaGATATGCTGGGCGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: EITRPHLSLLQTRHYSLHVSCTP*ICWASM Trigger: CATTGACGCCCAGCATATGCAGGGTGTGCAGGAAAC...ATGAAGGGAATAATGTCTAGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR CAA 72 bp | CCTCTGCCCACACCTACTGTTTTCTTTCACCACATTTaGTGGATGAAACATGACCTGGTTTCCTTCATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLPTPTVFFHHI*WMKHDLVSFIH Trigger: GTGAATGAAGGAAACCAGGTCATGTTTCATCCACAAAATGTGGTGAAAGAAAACAGTAGGTGTGGGCAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR TCA 90 bp | GAAGCCATATTTTATTACTGTTTCTTTCTCCTGTCACACCAGGAAACCCAGCTAGGCACCATGAGGCAATaGAGCCTTTATTGCATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: EAIFYYCFFLLSHQETQLGTMRQ*SLYCIS Trigger: GCTAATGCAATAAAGGCTTCATTGCCTCATGGTGCC...TAGCTGGGTTTCCTGGTGTGACAGGAGAAAGAAACAGTAATAAAATATGGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
||
| CDS-3UTR TCA 90 bp | GAAGCCATATTTTATTACTGTTTCTTTCTCCTGTCACACCAGGAAACCCAGCTAGGTGTGATCTCCACTTaGATACACCTTGTACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EAIFYYCFFLLSHQETQLGVIST*IHLVPS Trigger: GGAAGGTACAAGGTGTATTCAAGTGGAGATCACACC...TAGCTGGGTTTCCTGGTGTGACAGGAGAAAGAAACAGTAATAAAATATGGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
||
| CDS-3UTR TCA 90 bp | TCAGTTACAATACTTAGCACAGGCTTCCTCAGCGTGCTCTCCTTTACTGAGGTCTCCATCAGTTCTTCTTaGCCTGTTAATTCTGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SVTILSTGFLSVLSFTEVSISSS*PVNSVS Trigger: AGATACAGAATTAACAGGTCAAGAAGAACTGATGGA...GACCTCAGTAAAGGAGAGCACGCTGAGGAAGCCTGTGCTAAGTATTGTAACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
||
| CDS-3UTR GCA 90 bp | GGGGAAAAGAGTTCCCAAGAAATAACACGACCACATCTCAGCTTACTGCAAACTATGAAATCGGTATCCTaGTGCTCACACCTCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: GEKSSQEITRPHLSLLQTMKSVS*CSHLCI Trigger: AATACAGAGGTGTGAGCAGCAGGATACCGATTTCAT...AGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTCTTGGGAACTCTTTTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030849.13 ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| 3UTR CAA 72 bp | TGCTTCCTCCCGACCGTCTCTGGTTCTTTCCTACACTaGTCTTGTTACTACAATTGTGACTACTGTTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: CFLPTVSGSFLH*SCYYNCDYCLI Trigger: TATCAAACAGTAGTCACAATTGTAGTAACAAGACAAGTGTAGGAAAGAACCAGAGACGGTCGGGAGGAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR TCA 90 bp | AACGAAAAGATTCCAAGTTCTTCAAAATTGGCATCCTTAGAGCTGTCATCTTGCACAAATCTGACACAGTaGCTGAAGAGAGACACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NEKIPSSSKLASLELSSCTNLTQ*LKRDTG Trigger: CCCAGTGTCTCTCTTCAGTCACTGTGTCAGATTTGT...GCAAGATGACAGCTCTAAGGATGCCAATTTTGAAGAACTTGGAATCTTTTCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
||
| CDS-3UTR TCA 90 bp | AACGAAAAGATTCCAAGTTCTTCAAAATTGGCATCCTTAGAGCTGTCATCTTGCTCATCCAGTGCTTTCTaGGCTAGATCCCATTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NEKIPSSSKLASLELSSCSSSAF*ARSHSP Trigger: TGGAGAATGGGATCTAGCTCAGAAAGCACTGGATGA...GCAAGATGACAGCTCTAAGGATGCCAATTTTGAAGAACTTGGAATCTTTTCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
||
| CDS-3UTR TCA 90 bp | GAAATAACACGACCACATCTCAGCTTACTGCAAACTAGACATTATTCCCTTCATTGTCTTTTCCACCTGTaGCCTCGTATTGACATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EITRPHLSLLQTRHYSLHCLFHL*PRIDML Trigger: CAGCATGTCAATACGAGGTCACAGGTGGAAAAGACA...ATGAAGGGAATAATGTCTAGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030849.13 ENSMUST00000115109.2 ENSMUST00000197617.5 |
||
| CDS-3UTR TCA 90 bp | AACGAAAAGATTCCAAGTTCTTCAAAATTGGCATCCTTAGAGCTGTCATCTTGCTGTCTTTTCCACCTGTaGCCTCGTATTGACATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NEKIPSSSKLASLELSSCCLFHL*PRIDML Trigger: CAGCATGTCAATACGAGGTCACAGGTGGAAAAGACA...GCAAGATGACAGCTCTAAGGATGCCAATTTTGAAGAACTTGGAATCTTTTCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
||
| CDS-3UTR CCA 90 bp | GAAATAACACGACCACATCTCAGCTTACTGCAAACTAGACATTATTCCCTTCATACTGAAGAGAGACACTaGGCATGTAGGTTAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EITRPHLSLLQTRHYSLHTEERH*ACRLRQ Trigger: CTGCCTTAACCTACATGCCCAGTGTCTCTCTTCAGT...ATGAAGGGAATAATGTCTAGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030849.13 ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS-3UTR CCA 90 bp | AACGAAAAGATTCCAAGTTCTTCAAAATTGGCATCCTTAGAGCTGTCATCTTGCACTGAAGAGAGACACTaGGCATGTAGGTTAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NEKIPSSSKLASLELSSCTEERH*ACRLRQ Trigger: CTGCCTTAACCTACATGCCCAGTGTCTCTCTTCAGT...GCAAGATGACAGCTCTAAGGATGCCAATTTTGAAGAACTTGGAATCTTTTCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
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| CDS-3UTR TCA 90 bp | GAAGCCATATTTTATTACTGTTTCTTTCTCCTGTCACACCAGGAAACCCAGCTAGATTTCATGGCACCATaGGGCAATGAAGCCTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: EAIFYYCFFLLSHQETQLDFMAP*GNEAFI Trigger: AATAAAGGCTTCATTGCCTCATGGTGCCATGAAATC...TAGCTGGGTTTCCTGGTGTGACAGGAGAAAGAAACAGTAATAAAATATGGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
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| CDS-3UTR TCA 90 bp | GAAGCCATATTTTATTACTGTTTCTTTCTCCTGTCACACCAGGAAACCCAGCTAGGTAACTGCATTTCTTaGTATTCTAGAGGAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EAIFYYCFFLLSHQETQLGNCIS*YSRGGW Trigger: CCAACCTCCTCTAGAATATCAAGAAATGCAGTTACC...TAGCTGGGTTTCCTGGTGTGACAGGAGAAAGAAACAGTAATAAAATATGGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
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| CDS-3UTR TCA 90 bp | GGGGAAAAGAGTTCCCAAGAAATAACACGACCACATCTCAGCTTACTGCAAACTTTGTTACTACAATTGTaGCTACTGTTTGATAGACCC | + |
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Preference number: 4 (lower is better) Translates to: GEKSSQEITRPHLSLLQTLLLQL*LLFDRP Trigger: GGGTCTATCAAACAGTAGTCACAATTGTAGTAACAA...AGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTCTTGGGAACTCTTTTCCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| CDS-3UTR GCA 90 bp | GAAGCCATATTTTATTACTGTTTCTTTCTCCTGTCACACCAGGAAACCCAGCTAATGAAATCGGTATCCTaGTGCTCACACCTCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: EAIFYYCFFLLSHQETQLMKSVS*CSHLCI Trigger: AATACAGAGGTGTGAGCAGCAGGATACCGATTTCAT...TAGCTGGGTTTCCTGGTGTGACAGGAGAAAGAAACAGTAATAAAATATGGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
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| CDS-3UTR CCA 90 bp | CCACGAGTGCTCTCTGTGAAGACGAGCAGTATTAAAAAGCACACATCTCCATTTGGATACAATTCTAGCTaGGCTCTGTATATAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PRVLSVKTSSIKKHTSPFGYNSS*ALYIMS Trigger: TGACATTATATACAGAGCCCAGCTAGAATTGTATCC...AAATGGAGATGTGTGCTTTTTAATACTGCTCGTCTTCACAGAGAGCACTCGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| CDS-3UTR TCA 90 bp | GAAATAACACGACCACATCTCAGCTTACTGCAAACTAGACATTATTCCCTTCATGATTTCATGGCACCATaGGGCAATGAAGCCTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: EITRPHLSLLQTRHYSLHDFMAP*GNEAFI Trigger: AATAAAGGCTTCATTGCCTCATGGTGCCATGAAATC...ATGAAGGGAATAATGTCTAGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030849.13 ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS-3UTR GCA 90 bp | GAAGCCATATTTTATTACTGTTTCTTTCTCCTGTCACACCAGGAAACCCAGCTATATTTAAACCGGCTCTaGAAATTCCAGCAGGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: EAIFYYCFFLLSHQETQLYLNRL*KFQQVI Trigger: AATCACCTGCTGGAATTTGCAGAGCCGGTTTAAATA...TAGCTGGGTTTCCTGGTGTGACAGGAGAAAGAAACAGTAATAAAATATGGCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
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| CDS-3UTR CCA 90 bp | GGGGAAAAGAGTTCCCAAGAAATAACACGACCACATCTCAGCTTACTGCAAACTATAAGCTTTTCTTCTTaGAGACTACAGGCAGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GEKSSQEITRPHLSLLQTISFSS*RLQAEN Trigger: ATTTTCTGCCTGTAGTCTCCAAGAAGAAAAGCTTAT...AGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTCTTGGGAACTCTTTTCCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| CDS-3UTR TCA 90 bp | AACGAAAAGATTCCAAGTTCTTCAAAATTGGCATCCTTAGAGCTGTCATCTTGCATGCTGGAAGGTTCATaGTATACAGATGGTTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NEKIPSSSKLASLELSSCMLEGS*YTDGLD Trigger: ATCCAAACCATCTGTATATCATGAACCTTCCAGCAT...GCAAGATGACAGCTCTAAGGATGCCAATTTTGAAGAACTTGGAATCTTTTCGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
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| CDS-3UTR TCA 90 bp | ACAAATGAGAAGTGGGGATTTGAAATGAGAGTCTCTAAGAAGTCACATGTCAATGATTTCATGGCACCATaGGGCAATGAAGCCTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: TNEKWGFEMRVSKKSHVNDFMAP*GNEAFI Trigger: AATAAAGGCTTCATTGCCTCATGGTGCCATGAAATC...ATTGACATGTGACTTCTTAGAGACTCTCATTTCAAATCCCCACTTCTCATTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| CDS-3UTR GCA 90 bp | ACAAATGAGAAGTGGGGATTTGAAATGAGAGTCTCTAAGAAGTCACATGTCAATATGAAATCGGTATCCTaGTGCTCACACCTCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: TNEKWGFEMRVSKKSHVNMKSVS*CSHLCI Trigger: AATACAGAGGTGTGAGCAGCAGGATACCGATTTCAT...ATTGACATGTGACTTCTTAGAGACTCTCATTTCAAATCCCCACTTCTCATTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR CAA 72 bp | CACACTTCAGAAGGTCACCTACCAGCAATCTCACTTTaGCTATTTAATGTTCTAAGGACTGCAACAGAAATT | + |
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Preference number: 4 (lower is better) Translates to: HTSEGHLPAISL*LFNVLRTATEI Trigger: AATTTCTGTTGCAGTCCTTAGAACATTAAATAGCAAAAGTGAGATTGCTGGTAGGTGACCTTCTGAAGTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| 3UTR CAA 72 bp | ACATTAATTTCTATCTACAGTGCCTTAGTGCCAACATaGTGCGTTTTCGCATTGTCTGTCAGTTACAATACT | + |
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Preference number: 4 (lower is better) Translates to: TLISIYSALVPT*CVFALSVSYNT Trigger: AGTATTGTAACTGACAGACAATGCGAAAACGCACAATGTTGGCACTAAGGCACTGTAGATAGAAATTAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| CDS GCA 90 bp | CCCCCAGCAGGAGAGCCTCAATGCAGCCGCTGCTGTGCACATCTCTaGTGGCCGACACGGCGAGGTAGCACCACATCAGCTCCGGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: PPAGEPQCSRCCAHL*WPTRRGSTTSAPGG Trigger: TCCTCCCGGAGCTGATGTGGTGCTACCTCGCCGTGTCGGCCAGCAGAGATGTGCACAGCAGCGGCTGCATTGAGGCTCTCCTGCTGGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030849.13 ENSMUST00000101513.9 ENSMUST00000115109.2 |
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| CDS-3UTR CAA 90 bp | TCATGCCCCAGTGTAGCACCACAGCACGTGCACCTCACAGGAGCGTCAGCCAACCCTTGGCTGCTGGGCTaGGGCAGGGACTGGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SCPSVAPQHVHLTGASANPWLLG*GRDWLE Trigger: CTCCAGCCAGTCCCTGCCCAAGCCCAGCAGCCAAGG...GTTGGCTGACGCTCCTGTGAGGTGCACGTGCTGTGGTGCTACACTGGGGCATGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| CDS CCA 90 bp | CCAGCAGGAGAGCCTCAATGCAGCCGCTGCTGTGCACATCTCTGCTaGCCGACACGGCGAGGTAGCACCACATCAGCTCCGGGAGGAACT | + |
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Preference number: 5 (lower is better) Translates to: PAGEPQCSRCCAHLC*PTRRGSTTSAPGGT Trigger: AGTTCCTCCCGGAGCTGATGTGGTGCTACCTCGCCGTGTCGGCCAGCAGAGATGTGCACAGCAGCGGCTGCATTGAGGCTCTCCTGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030849.13 ENSMUST00000101513.9 ENSMUST00000115109.2 |
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| CDS GCA 90 bp | TTTCCAGGTTGTAAACCCCCAGCAGGAGAGCCTCAATGCAGCCGCTaGTGTGCACATCTCTGCTGGCCGACACGGCGAGGTAGCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: FPGCKPPAGEPQCSR*CAHLCWPTRRGSTT Trigger: TGTGGTGCTACCTCGCCGTGTCGGCCAGCAGAGATGTGCACAGCAGCGGCTGCATTGAGGCTCTCCTGCTGGGGGTTTACAACCTGGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030849.13 ENSMUST00000101513.9 ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS-3UTR CAA 90 bp | TCATGCCCCAGTGTAGCACCACAGCACGTGCACCTCACAGGAGCGTCAGCCAACCTGGGCTCTCTGGGTTaGCTTGCGAGCAAAGTGATC | + |
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Preference number: 5 (lower is better) Translates to: SCPSVAPQHVHLTGASANLGSLG*LASKVI Trigger: GATCACTTTGCTCGCAAGCAAACCCAGAGAGCCCAG...GTTGGCTGACGCTCCTGTGAGGTGCACGTGCTGTGGTGCTACACTGGGGCATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| CDS GCA 90 bp | TGTCAACTATTTCCAGGTTGTAAACCCCCAGCAGGAGAGCCTCAATaGAGCCGCTGCTGTGCACATCTCTGCTGGCCGACACGGCGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CQLFPGCKPPAGEPQ*SRCCAHLCWPTRRG Trigger: ACCTCGCCGTGTCGGCCAGCAGAGATGTGCACAGCAGCGGCTGCATTGAGGCTCTCCTGCTGGGGGTTTACAACCTGGAAATAGTTGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030849.13 ENSMUST00000101513.9 ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS-3UTR CAA 90 bp | AATACAGTGGCCGCAGTCTTAGCCAGGCCTTGGCTGCTGGGCTTGGGCAGGGACCACTGTACACGACTTTaGATAAGCCATGCTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: NTVAAVLARPWLLGLGRDHCTRL*ISHAGT Trigger: TGTCCCAGCATGGCTTATCAAAAGTCGTGTACAGTG...GTCCCTGCCCAAGCCCAGCAGCCAAGGCCTGGCTAAGACTGCGGCCACTGTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS-3UTR CAA 90 bp | ATGGCTTCATGGACTCGCTCCTCCCCCTGGGCTCTACAGCCCAGTCCTCTCACAAATTGTGACTACTGTTaGATAGACCCGACTGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: MASWTRSSPWALQPSPLTNCDYC*IDPTGW Trigger: CCAGCCAGTCGGGTCTATCAAACAGTAGTCACAATT...TGTGAGAGGACTGGGCTGTAGAGCCCAGGGGGAGGAGCGAGTCCATGAAGCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| CDS-3UTR CAA 90 bp | GAGCGAAGTGACAGTTACTCTGCAGACAGAGTGACGCTAATACTAGGAGGTCCCTGTCAGCATCTCCCGTaGAGGATGGGGTCCACTGTA | + |
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Preference number: 5 (lower is better) Translates to: ERSDSYSADRVTLILGGPCQHLP*RMGSTV Trigger: TACAGTGGACCCCATCCTCAACGGGAGATGCTGACA...GGGACCTCCTAGTATTAGCGTCACTCTGTCTGCAGAGTAACTGTCACTTCGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS-3UTR CAA 90 bp | GCCAAGGGGCTTTCTCGAGGCTCCAGGAAGTGGAAGGGTAGCAGCACCCGGGCAAGATCCCATTCTCCATaGTATATGGCAAAATACACT | + |
|
Preference number: 5 (lower is better) Translates to: AKGLSRGSRKWKGSSTRARSHSP*YMAKYT Trigger: AGTGTATTTTGCCATATACAATGGAGAATGGGATCT...TGCCCGGGTGCTGCTACCCTTCCACTTCCTGGAGCCTCGAGAAAGCCCCTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| CDS-3UTR CAA 90 bp | GAAAGGCCAGAGGCAGATGGCCAGTTCCAACAAGACAGACAACTTGGGGCCCAACACTGTACACGACTTTaGATAAGCCATGCTGGGACA | + |
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Preference number: 5 (lower is better) Translates to: ERPEADGQFQQDRQLGAQHCTRL*ISHAGT Trigger: TGTCCCAGCATGGCTTATCAAAAGTCGTGTACAGTG...TTGGGCCCCAAGTTGTCTGTCTTGTTGGAACTGGCCATCTGCCTCTGGCCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| CDS-3UTR CAA 90 bp | ATGGCTTCATGGACTCGCTCCTCCCCCTGGGCTCTACAGCCCAGTCCTCTCACACACAGACACATATTCTaGAACAAATCTGACACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: MASWTRSSPWALQPSPLTHRHIF*NKSDTV Trigger: CACTGTGTCAGATTTGTTCAAGAATATGTGTCTGTG...TGTGAGAGGACTGGGCTGTAGAGCCCAGGGGGAGGAGCGAGTCCATGAAGCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| CDS-3UTR CAA 90 bp | TTCAGAGAGAGAAGCTCAAGGTTCTCGCTCTGGGCTCTCTGGGTTTGCTTGCGAACAGCTGCTCTCAGGTaGCTCATGTCTTTTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: FRERSSRFSLWALWVCLRTAALR*LMSFPP Trigger: AGGTGGAAAAGACATGAGCAACCTGAGAGCAGCTGT...TCGCAAGCAAACCCAGAGAGCCCAGAGCGAGAACCTTGAGCTTCTCTCTCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS-3UTR CAA 90 bp | GATTTACTAAATACAGTGGCCGCAGTCTTAGCCAGGCCTTGGCTGCTGGGCTTGCACTGTACACGACTTTaGATAAGCCATGCTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: DLLNTVAAVLARPWLLGLHCTRL*ISHAGT Trigger: TGTCCCAGCATGGCTTATCAAAAGTCGTGTACAGTG...CAAGCCCAGCAGCCAAGGCCTGGCTAAGACTGCGGCCACTGTATTTAGTAAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS-3UTR CAA 90 bp | ACTGGGGCACCACTGACTTGTTCAAAGGATTTACTAAATACAGTGGCCGCAGTCTGTCAGCATCTCCCGTaGAGGATGGGGTCCACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: TGAPLTCSKDLLNTVAAVCQHLP*RMGSTV Trigger: TACAGTGGACCCCATCCTCAACGGGAGATGCTGACA...GACTGCGGCCACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS-3UTR CAA 90 bp | TCTCCTTCGCTCCAGCTTTGCTTCCTCCCGACCGTCTCTGGTTCTTTCCTACACGTATTTTCTTACATGTaGTCGGGGATAGCCACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SPSLQLCFLPTVSGSFLHVFSYM*SGIATD Trigger: GTCTGTGGCTATCCCCGACAACATGTAAGAAAATAC...GTGTAGGAAAGAACCAGAGACGGTCGGGAGGAAGCAAAGCTGGAGCGAAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS-3UTR CAA 90 bp | CCACATTTCTTACTGCTTGGTTGGCAGGAATGGGTGATAGCTGAATTCTTTCTAAGTCTTAGCCAGGCCTaGGCTGCTGGGCTTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PHFLLLGWQEWVIAEFFLSLSQA*AAGLGQ Trigger: CTGCCCAAGCCCAGCAGCCAAGGCCTGGCTAAGACT...TAGAAAGAATTCAGCTATCACCCATTCCTGCCAACCAAGCAGTAAGAAATGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| CDS-3UTR CAA 90 bp | AAGCTCAAGGTTCTCGCTCTGGGCTCTCTGGGTTTGCTTGCGAGCAAAGTGATCTGGTGTGATCTCCACTaGAATACACCTTGTACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KLKVLALGSLGLLASKVIWCDLH*NTPCTF Trigger: GAAGGTACAAGGTGTATTCAAGTGGAGATCACACCA...GATCACTTTGCTCGCAAGCAAACCCAGAGAGCCCAGAGCGAGAACCTTGAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS TCA 90 bp | CGGCTCTGCCGACTGCCCTTGCTTCCTCCATGTCTTTTCCACCTGTaGCCTCGTATTGACATGCTGGTAACTGCATTTCTTGATATTCTA | + |
|
Preference number: 5 (lower is better) Translates to: RLCRLPLLPPCLFHL*PRIDMLVTAFLDIL Trigger: TAGAATATCAAGAAATGCAGTTACCAGCATGTCAATACGAGGTCACAGGTGGAAAAGACATGGAGGAAGCAAGGGCAGTCGGCAGAGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
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| CDS-3UTR CAA 90 bp | CTCCTTCGCTCCAGCTTTGCTTCCTCCCGACCGTCTCTGGTTCTTTCCTACACTCACAGACACATATTCTaGAACAAATCTGACACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLRSSFASSRPSLVLSYTHRHIF*NKSDTV Trigger: CACTGTGTCAGATTTGTTCAAGAATATGTGTCTGTG...AGTGTAGGAAAGAACCAGAGACGGTCGGGAGGAAGCAAAGCTGGAGCGAAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS-3UTR CAA 90 bp | TCAAAGGATTTACTAAATACAGTGGCCGCAGTCTTAGCCAGGCCTTGGCTGCTGTGGTGTGATCTCCACTaGAATACACCTTGTACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SKDLLNTVAAVLARPWLLWCDLH*NTPCTF Trigger: GAAGGTACAAGGTGTATTCAAGTGGAGATCACACCA...CAGCAGCCAAGGCCTGGCTAAGACTGCGGCCACTGTATTTAGTAAATCCTTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS-3UTR CAA 90 bp | AGTGACAGTTACTCTGCAGACAGAGTGACGCTAATACTAGGAGGTCCCTGCTGGTTTTCTTACAGATTTTaGCCTCCTGAGTTCGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SDSYSADRVTLILGGPCWFSYRF*PPEFGQ Trigger: TTGCCCGAACTCAGGAGGCAAAAATCTGTAAGAAAA...CCAGCAGGGACCTCCTAGTATTAGCGTCACTCTGTCTGCAGAGTAACTGTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS GCA 90 bp | TCCCATTCTCCATTGTATATGGCAAAATACACTCCTGTTAGCATCTaGACCATGAAGCCGGATGAAATCGGTATCCTGCTGCTCACACCT | + |
|
Preference number: 5 (lower is better) Translates to: SHSPLYMAKYTPVSI*TMKPDEIGILLLTP Trigger: AGGTGTGAGCAGCAGGATACCGATTTCATCCGGCTTCATGGTGCAGATGCTAACAGGAGTGTATTTTGCCATATACAATGGAGAATGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030849.13 ENSMUST00000101513.9 ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS-3UTR CAA 90 bp | TTCAGAGAGAGAAGCTCAAGGTTCTCGCTCTGGGCTCTCTGGGTTTGCTTGCGAAATTTGTGGCATAATTaGGCAAAGATGTTTCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: FRERSSRFSLWALWVCLRNLWHN*AKMFLG Trigger: TCCCAGAAACATCTTTGCCAAATTATGCCACAAATT...TCGCAAGCAAACCCAGAGAGCCCAGAGCGAGAACCTTGAGCTTCTCTCTCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115109.2 |
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| CDS-3UTR CAA 90 bp | ACTGGGGCACCACTGACTTGTTCAAAGGATTTACTAAATACAGTGGCCGCAGTCGTATTTTCTTACATGTaGTCGGGGATAGCCACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TGAPLTCSKDLLNTVAAVVFSYM*SGIATD Trigger: GTCTGTGGCTATCCCCGACAACATGTAAGAAAATAC...GACTGCGGCCACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS-3UTR CAA 90 bp | ACAAATGAGAAGTGGGGATTTGAAATGAGAGTCTCTAAGAAGTCACATGTCAATTCCTTCGCTCCAGCTTaGCTTCCTCCCGACCGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TNEKWGFEMRVSKKSHVNSFAPA*LPPDRL Trigger: GAGACGGTCGGGAGGAAGCAAAGCTGGAGCGAAGGA...ATTGACATGTGACTTCTTAGAGACTCTCATTTCAAATCCCCACTTCTCATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| CDS-3UTR CAA 90 bp | GAAGCCATATTTTATTACTGTTTCTTTCTCCTGTCACACCAGGAAACCCAGCTACTCTGCCGACTGCCCTaGCTTCCTCCATGTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: EAIFYYCFFLLSHQETQLLCRLP*LPPCLF Trigger: GAAAAGACATGGAGGAAGCAAGGGCAGTCGGCAGAG...TAGCTGGGTTTCCTGGTGTGACAGGAGAAAGAAACAGTAATAAAATATGGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
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| CDS TCA 90 bp | CTCCATTGTATATGGCAAAATACACTCCTGTTAGCATCTGCACCATaGAGCCGGATGAAATCGGTATCCTGCTGCTCACACCTCTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: LHCIWQNTLLLASAP*SRMKSVSCCSHLCI Trigger: AATACAGAGGTGTGAGCAGCAGGATACCGATTTCATCCGGCTTCATGGTGCAGATGCTAACAGGAGTGTATTTTGCCATATACAATGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030849.13 ENSMUST00000101513.9 ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS-3UTR CAA 90 bp | AACGAAAAGATTCCAAGTTCTTCAAAATTGGCATCCTTAGAGCTGTCATCTTGCTGTCAGCATCTCCCGTaGAGGATGGGGTCCACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: NEKIPSSSKLASLELSSCCQHLP*RMGSTV Trigger: TACAGTGGACCCCATCCTCAACGGGAGATGCTGACA...GCAAGATGACAGCTCTAAGGATGCCAATTTTGAAGAACTTGGAATCTTTTCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
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| CDS-3UTR CAA 90 bp | AGTGACAGTTACTCTGCAGACAGAGTGACGCTAATACTAGGAGGTCCCTGCTGGAGATCCCATTCTCCATaGTATATGGCAAAATACACT | + |
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Preference number: 5 (lower is better) Translates to: SDSYSADRVTLILGGPCWRSHSP*YMAKYT Trigger: AGTGTATTTTGCCATATACAATGGAGAATGGGATCT...CCAGCAGGGACCTCCTAGTATTAGCGTCACTCTGTCTGCAGAGTAACTGTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS-3UTR CAA 90 bp | CTACAGGCAGAAAATCTATTGGCATCTGCTCCAGCAACACAGCCAATGGCGGGAAGATCCCATTCTCCATaGTATATGGCAAAATACACT | + |
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Preference number: 5 (lower is better) Translates to: LQAENLLASAPATQPMAGRSHSP*YMAKYT Trigger: AGTGTATTTTGCCATATACAATGGAGAATGGGATCT...TCCCGCCATTGGCTGTGTTGCTGGAGCAGATGCCAATAGATTTTCTGCCTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS-3UTR CAA 90 bp | GTCTGCAGCGCTGGGCTCATTTATTGCCAACAAGAGAGGCAAAAGGTGCTGCATAATAAGCTTTTCTTCTaGGAGACTACAGGCAGAAAA | + |
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Preference number: 5 (lower is better) Translates to: VCSAGLIYCQQERQKVLHNKLFF*ETTGRK Trigger: TTTTCTGCCTGTAGTCTCCAAGAAGAAAAGCTTATT...ATGCAGCACCTTTTGCCTCTCTTGTTGGCAATAAATGAGCCCAGCGCTGCAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| CDS-3UTR CAA 90 bp | ACAAATGAGAAGTGGGGATTTGAAATGAGAGTCTCTAAGAAGTCACATGTCAATTGTCAGCATCTCCCGTaGAGGATGGGGTCCACTGTA | + |
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Preference number: 5 (lower is better) Translates to: TNEKWGFEMRVSKKSHVNCQHLP*RMGSTV Trigger: TACAGTGGACCCCATCCTCAACGGGAGATGCTGACA...ATTGACATGTGACTTCTTAGAGACTCTCATTTCAAATCCCCACTTCTCATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| CDS-3UTR CAA 90 bp | ACTGGGGCACCACTGACTTGTTCAAAGGATTTACTAAATACAGTGGCCGCAGTCCACAGACACATATTCTaGAACAAATCTGACACAGTG | + |
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Preference number: 5 (lower is better) Translates to: TGAPLTCSKDLLNTVAAVHRHIF*NKSDTV Trigger: CACTGTGTCAGATTTGTTCAAGAATATGTGTCTGTG...GACTGCGGCCACTGTATTTAGTAAATCCTTTGAACAAGTCAGTGGTGCCCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS-3UTR CAA 90 bp | GGGGAAAAGAGTTCCCAAGAAATAACACGACCACATCTCAGCTTACTGCAAACTGTATTTTCTTACATGTaGTCGGGGATAGCCACAGAC | + |
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Preference number: 5 (lower is better) Translates to: GEKSSQEITRPHLSLLQTVFSYM*SGIATD Trigger: GTCTGTGGCTATCCCCGACAACATGTAAGAAAATAC...AGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTCTTGGGAACTCTTTTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000030849.13 ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS-3UTR CAA 90 bp | CCGTCTCTGGTTCTTTCCTACACTTGTCTTGTTACTACAATTGTGACTACTGTTACAGCTGCTCTCAGGTaGCTCATGTCTTTTCCACCT | + |
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Preference number: 5 (lower is better) Translates to: PSLVLSYTCLVTTIVTTVTAALR*LMSFPP Trigger: AGGTGGAAAAGACATGAGCAACCTGAGAGCAGCTGT...AACAGTAGTCACAATTGTAGTAACAAGACAAGTGTAGGAAAGAACCAGAGACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS CCA 90 bp | CACATATTCTTGAACAAATCTGACACAGTGACTGAAGAGAGACACTaGGCATGTAGGTTAAGGCAGCATTGTAACACAGCAGAAGGAATG | + |
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Preference number: 5 (lower is better) Translates to: HIFLNKSDTVTEERH*ACRLRQHCNTAEGM Trigger: CATTCCTTCTGCTGTGTTACAATGCTGCCTTAACCTACATGCCCAGTGTCTCTCTTCAGTCACTGTGTCAGATTTGTTCAAGAATATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030849.13 ENSMUST00000101513.9 ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS-3UTR CAA 90 bp | CTGTCAGTTACAATACTTAGCACAGGCTTCCTCAGCGTGCTCTCCTTTACTGAGAATTTGTGGCATAATTaGGCAAAGATGTTTCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: LSVTILSTGFLSVLSFTENLWHN*AKMFLG Trigger: TCCCAGAAACATCTTTGCCAAATTATGCCACAAATT...CTCAGTAAAGGAGAGCACGCTGAGGAAGCCTGTGCTAAGTATTGTAACTGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| CDS-3UTR CAA 90 bp | GAAGCCATATTTTATTACTGTTTCTTTCTCCTGTCACACCAGGAAACCCAGCTACACTGTACACGACTTTaGATAAGCCATGCTGGGACA | + |
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Preference number: 5 (lower is better) Translates to: EAIFYYCFFLLSHQETQLHCTRL*ISHAGT Trigger: TGTCCCAGCATGGCTTATCAAAAGTCGTGTACAGTG...TAGCTGGGTTTCCTGGTGTGACAGGAGAAAGAAACAGTAATAAAATATGGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
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| CDS-3UTR CAA 90 bp | CAAGAACAAACACAAGCTAATGCACAAATGTCCTCTGCCCACACCTACTGTTTTTGGTGTGATCTCCACTaGAATACACCTTGTACCTTC | + |
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Preference number: 5 (lower is better) Translates to: QEQTQANAQMSSAHTYCFWCDLH*NTPCTF Trigger: GAAGGTACAAGGTGTATTCAAGTGGAGATCACACCA...AAAACAGTAGGTGTGGGCAGAGGACATTTGTGCATTAGCTTGTGTTTGTTCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| CDS-3UTR CAA 90 bp | GGACGTGTGTGCAACTGTTCCTCTGTGTCTCATCTAACAGCTCAAGAGCAAAGAGGTTCTTTCCTACACTaGTCTTGTTACTACAATTGT | + |
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Preference number: 5 (lower is better) Translates to: GRVCNCSSVSHLTAQEQRGSFLH*SCYYNC Trigger: ACAATTGTAGTAACAAGACAAGTGTAGGAAAGAACC...TCTTTGCTCTTGAGCTGTTAGATGAGACACAGAGGAACAGTTGCACACACGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| CDS-3UTR CAA 90 bp | GGGGAAAAGAGTTCCCAAGAAATAACACGACCACATCTCAGCTTACTGCAAACTTGGGGCACCACTGACTaGTTCAAAGGATTTACTAAA | + |
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Preference number: 5 (lower is better) Translates to: GEKSSQEITRPHLSLLQTWGTTD*FKGFTK Trigger: TTTAGTAAATCCTTTGAACAAGTCAGTGGTGCCCCA...AGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTCTTGGGAACTCTTTTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| CDS-3UTR CAA 90 bp | GAAGCCATATTTTATTACTGTTTCTTTCTCCTGTCACACCAGGAAACCCAGCTAGTATTTTCTTACATGTaGTCGGGGATAGCCACAGAC | + |
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Preference number: 5 (lower is better) Translates to: EAIFYYCFFLLSHQETQLVFSYM*SGIATD Trigger: GTCTGTGGCTATCCCCGACAACATGTAAGAAAATAC...TAGCTGGGTTTCCTGGTGTGACAGGAGAAAGAAACAGTAATAAAATATGGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
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| CDS-3UTR CAA 90 bp | CAAGAACAAACACAAGCTAATGCACAAATGTCCTCTGCCCACACCTACTGTTTTTTACTATGTCCGTGTTaGTCAACTATTTCCAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: QEQTQANAQMSSAHTYCFLLCPC*STISRL Trigger: CAACCTGGAAATAGTTGACAAACACGGACATAGTAA...AAAACAGTAGGTGTGGGCAGAGGACATTTGTGCATTAGCTTGTGTTTGTTCTTG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| CDS-3UTR CAA 90 bp | AACGAAAAGATTCCAAGTTCTTCAAAATTGGCATCCTTAGAGCTGTCATCTTGCTGGTGTGATCTCCACTaGAATACACCTTGTACCTTC | + |
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Preference number: 5 (lower is better) Translates to: NEKIPSSSKLASLELSSCWCDLH*NTPCTF Trigger: GAAGGTACAAGGTGTATTCAAGTGGAGATCACACCA...GCAAGATGACAGCTCTAAGGATGCCAATTTTGAAGAACTTGGAATCTTTTCGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
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| CDS-3UTR CAA 90 bp | GAAGCCATATTTTATTACTGTTTCTTTCTCCTGTCACACCAGGAAACCCAGCTATTACTATGTCCGTGTTaGTCAACTATTTCCAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: EAIFYYCFFLLSHQETQLLLCPC*STISRL Trigger: CAACCTGGAAATAGTTGACAAACACGGACATAGTAA...TAGCTGGGTTTCCTGGTGTGACAGGAGAAAGAAACAGTAATAAAATATGGCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
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| CDS-3UTR CAA 90 bp | GAAATAACACGACCACATCTCAGCTTACTGCAAACTAGACATTATTCCCTTCATTTTTCTTACAGATTTTaGCCTCCTGAGTTCGGGCAA | + |
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Preference number: 5 (lower is better) Translates to: EITRPHLSLLQTRHYSLHFSYRF*PPEFGQ Trigger: TTGCCCGAACTCAGGAGGCAAAAATCTGTAAGAAAA...ATGAAGGGAATAATGTCTAGTTTGCAGTAAGCTGAGATGTGGTCGTGTTATTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS-3UTR CAA 90 bp | GAAGCCATATTTTATTACTGTTTCTTTCTCCTGTCACACCAGGAAACCCAGCTAAATTTGTGGCATAATTaGGCAAAGATGTTTCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: EAIFYYCFFLLSHQETQLNLWHN*AKMFLG Trigger: TCCCAGAAACATCTTTGCCAAATTATGCCACAAATT...TAGCTGGGTTTCCTGGTGTGACAGGAGAAAGAAACAGTAATAAAATATGGCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
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| CDS-3UTR CAA 90 bp | AACGAAAAGATTCCAAGTTCTTCAAAATTGGCATCCTTAGAGCTGTCATCTTGCCACAGACACATATTCTaGAACAAATCTGACACAGTG | + |
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Preference number: 5 (lower is better) Translates to: NEKIPSSSKLASLELSSCHRHIF*NKSDTV Trigger: CACTGTGTCAGATTTGTTCAAGAATATGTGTCTGTG...GCAAGATGACAGCTCTAAGGATGCCAATTTTGAAGAACTTGGAATCTTTTCGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
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| CDS-3UTR CAA 90 bp | AACGAAAAGATTCCAAGTTCTTCAAAATTGGCATCCTTAGAGCTGTCATCTTGCAGATCCCATTCTCCATaGTATATGGCAAAATACACT | + |
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Preference number: 5 (lower is better) Translates to: NEKIPSSSKLASLELSSCRSHSP*YMAKYT Trigger: AGTGTATTTTGCCATATACAATGGAGAATGGGATCT...GCAAGATGACAGCTCTAAGGATGCCAATTTTGAAGAACTTGGAATCTTTTCGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
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| CDS CCA 72 bp | GAGCCTCAATGCAGCCGCTGCTGTGCACATCTCTGCTaGCCGACACGGCGAGGTAGCACCACATCAGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: EPQCSRCCAHLC*PTRRGSTTSAP Trigger: CGGAGCTGATGTGGTGCTACCTCGCCGTGTCGGCCAGCAGAGATGTGCACAGCAGCGGCTGCATTGAGGCTC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030849.13 ENSMUST00000101513.9 ENSMUST00000115109.2 |
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| CDS GCA 72 bp | GGAGAGCCTCAATGCAGCCGCTGCTGTGCACATCTCTaGTGGCCGACACGGCGAGGTAGCACCACATCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GEPQCSRCCAHL*WPTRRGSTTSA Trigger: AGCTGATGTGGTGCTACCTCGCCGTGTCGGCCAGCAGAGATGTGCACAGCAGCGGCTGCATTGAGGCTCTCC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030849.13 ENSMUST00000101513.9 ENSMUST00000115109.2 |
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| CDS GCA 72 bp | TTTCCAGGTTGTAAACCCCCAGCAGGAGAGCCTCAATaGAGCCGCTGCTGTGCACATCTCTGCTGGCCGACA | + |
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Preference number: 6 (lower is better) Translates to: FPGCKPPAGEPQ*SRCCAHLCWPT Trigger: TGTCGGCCAGCAGAGATGTGCACAGCAGCGGCTGCATTGAGGCTCTCCTGCTGGGGGTTTACAACCTGGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030849.13 ENSMUST00000101513.9 ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS CCA 72 bp | TGGGGTCCACTGTACACGACTTTTGATAAGCCATGCTaGGACAGCGCACTCTCCGTCAGCGCCATAGACCCA | + |
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Preference number: 6 (lower is better) Translates to: WGPLYTTFDKPC*DSALSVSAIDP Trigger: TGGGTCTATGGCGCTGACGGAGAGTGCGCTGTCCCAGCATGGCTTATCAAAAGTCGTGTACAGTGGACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030849.13 ENSMUST00000101513.9 ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS GCA 72 bp | TCACTCCTAGGGTCTGTGGCTGTTTCCTGCACACCCTaGATATGCTGGGCGTCAATGTCTCCTAGAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SLLGSVAVSCTP*ICWASMSPRAL Trigger: CAGAGCTCTAGGAGACATTGACGCCCAGCATATGCAGGGTGTGCAGGAAACAGCCACAGACCCTAGGAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS CAA 72 bp | TCTCCCGTTGAGGATGGGGTCCACTGTACACGACTTTaGATAAGCCATGCTGGGACAGCGCACTCTCCGTCA | + |
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Preference number: 6 (lower is better) Translates to: SPVEDGVHCTRL*ISHAGTAHSPS Trigger: TGACGGAGAGTGCGCTGTCCCAGCATGGCTTATCAAAAGTCGTGTACAGTGGACCCCATCCTCAACGGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030849.13 ENSMUST00000101513.9 ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS CAA 90 bp | GCCAGCTGTGGACATTCCATCCTCCATCATTTTTCTTACAGATTTTaGCCTCCTGAGTTCGGGCAAGCCTCTGCTCTCACTCCTAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: ASCGHSILHHFSYRF*PPEFGQASALTPRV Trigger: GACCCTAGGAGTGAGAGCAGAGGCTTGCCCGAACTCAGGAGGCAAAAATCTGTAAGAAAAATGATGGAGGATGGAATGTCCACAGCTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS TCA 72 bp | ACTTCAAACCTGTTCTGTGCTGTCAGCATCTCCCGTTaGGGATGGGGTCCACTGTACACGACTTTTGATAAG | + |
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Preference number: 6 (lower is better) Translates to: TSNLFCAVSISR*GWGPLYTTFDK Trigger: CTTATCAAAAGTCGTGTACAGTGGACCCCATCCTCAACGGGAGATGCTGACAGCACAGAACAGGTTTGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030849.13 ENSMUST00000101513.9 ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS TCA 72 bp | CGACTGCCCTTGCTTCCTCCATGTCTTTTCCACCTGTaGCCTCGTATTGACATGCTGGTAACTGCATTTCTT | + |
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Preference number: 6 (lower is better) Translates to: RLPLLPPCLFHL*PRIDMLVTAFL Trigger: AAGAAATGCAGTTACCAGCATGTCAATACGAGGTCACAGGTGGAAAAGACATGGAGGAAGCAAGGGCAGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101513.9 |
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| CDS CAA 72 bp | GGACATTCCATCCTCCATCATTTTTCTTACAGATTTTaGCCTCCTGAGTTCGGGCAAGCCTCTGCTCTCACT | + |
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Preference number: 6 (lower is better) Translates to: GHSILHHFSYRF*PPEFGQASALT Trigger: AGTGAGAGCAGAGGCTTGCCCGAACTCAGGAGGCAAAAATCTGTAAGAAAAATGATGGAGGATGGAATGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115109.2 ENSMUST00000197617.5 |
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| CDS TCA 72 bp | CCTGTTAATTCTGTATCTCCATGTCTTTTCCACCTGTaGCCTCGTATTGACATGCTGGTAACTGCATTTCTT | + |
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Preference number: 6 (lower is better) Translates to: PVNSVSPCLFHL*PRIDMLVTAFL Trigger: AAGAAATGCAGTTACCAGCATGTCAATACGAGGTCACAGGTGGAAAAGACATGGAGATACAGAATTAACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030849.13 |
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| CDS TCA 72 bp | CTTGATATTCTAGAGGAGGTTGGTGTGATCTCCACTTaGATACACCTTGTACCTTCCTTACTAGATTTCATG | + |
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Preference number: 6 (lower is better) Translates to: LDILEEVGVIST*IHLVPSLLDFM Trigger: CATGAAATCTAGTAAGGAAGGTACAAGGTGTATTCAAGTGGAGATCACACCAACCTCCTCTAGAATATCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030849.13 ENSMUST00000101513.9 ENSMUST00000115109.2 ENSMUST00000197617.5 |
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