Pregenerated sensors for FAM124A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035184Ensembl transcript IDs: ENSMUST00000039064.8
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGGGGAAGCTGGGTGACTGTAGTGTCCGCTCTCCCCAAGGCTCCTaGGCACTAGCTGGAGGCTGGCCCTGTGGGACAGCACCACACACT | + |
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Preference number: 1 (lower is better) Translates to: MGKLGDCSVRSPQGS*ALAGGWPCGTAPHT Trigger: AGTGTGTGGTGCTGTCCCACAGGGCCAGCCTCCAGCTAGTGCGCAGGAGCCTTGGGGAGAGCGGACACTACAGTCACCCAGCTTCCCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR GCA 90 bp | GGTCCCTGTGTGACAGTGGGCACTAGGAAGGCATGCATTCTGTACTaGACACTGACGTGGGGCCAGTCCCTGGGTGTTCTTTCCCCCTTC | + |
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Preference number: 1 (lower is better) Translates to: GPCVTVGTRKACILY*TLTWGQSLGVLSPF Trigger: GAAGGGGGAAAGAACACCCAGGGACTGGCCCCACGTCAGTGTGCAGTACAGAATGCATGCCTTCCTAGTGCCCACTGTCACACAGGGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR TCA 90 bp | CCAGGCTTTCCTTGTGAGGATGGTGGACCCGAGGCTGATGGACAGTaGTGCGTAAGAGAGCTTGAAGGTCCTGCTGGAAAGGCTCCGAGA | + |
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Preference number: 1 (lower is better) Translates to: PGFPCEDGGPEADGQ*CVRELEGPAGKAPR Trigger: TCTCGGAGCCTTTCCAGCAGGACCTTCAAGCTCTCTTACGCATCACTGTCCATCAGCCTCGGGTCCACCATCCTCACAAGGAAAGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR CCA 90 bp | ACAGTGGGCACTAGGAAGGCATGCATTCTGTACTGCACACTGACGTaGGGCCAGTCCCTGGGTGTTCTTTCCCCCTTCAACACTTTGGCC | + |
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Preference number: 1 (lower is better) Translates to: TVGTRKACILYCTLT*GQSLGVLSPFNTLA Trigger: GGCCAAAGTGTTGAAGGGGGAAAGAACACCCAGGGACTGGCCCCACGTCAGTGTGCAGTACAGAATGCATGCCTTCCTAGTGCCCACTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR GCA 90 bp | CAGGCCATGAATCCCCTTATACAAATCAGTCCAGAAGGGACGGTCTaGAGGCTTGCTTACCAACATGAGTCGGCTGAGGAAGAGTGTGCA | + |
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Preference number: 1 (lower is better) Translates to: QAMNPLIQISPEGTV*RLAYQHESAEEECA Trigger: TGCACACTCTTCCTCAGCCGACTCATGTTGGTAAGCAAGCCTGCAGACCGTCCCTTCTGGACTGATTTGTATAAGGGGATTCATGGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR TCA 90 bp | ATCCAGAATCAGGACAGTCCACGTTTTTATTTATTTACACCGAGATaGCCTCAGAGTCCTGCAAAGTCCAAAGAGAGAGGCCCAGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: IQNQDSPRFYLFTPR*PQSPAKSKERGPGF Trigger: AAAGCCTGGGCCTCTCTCTTTGGACTTTGCAGGACTCTGAGGTCATCTCGGTGTAAATAAATAAAAACGTGGACTGTCCTGATTCTGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR CCA 90 bp | TTTTCTGAACCTCTAGAAATATGGCACCTGTCAGCTAAGGATAGGTaGCATGGTCAACATGCCAACAGTCTCCCAAGACAGATAATTAAG | + |
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Preference number: 1 (lower is better) Translates to: FSEPLEIWHLSAKDR*HGQHANSLPRQIIK Trigger: CTTAATTATCTGTCTTGGGAGACTGTTGGCATGTTGACCATGCCACCTATCCTTAGCTGACAGGTGCCATATTTCTAGAGGTTCAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCAAAGTCCAAAGAGAGAGGCCCAGGCTTTCCTTGTGAGGATGGTGGACCCGCGTGGGGCCAGTCCCTaGGTGTTCTTTCCCCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LQSPKREAQAFLVRMVDPRGASP*VFFPPS Trigger: TGAAGGGGGAAAGAACACCCAGGGACTGGCCCCACG...CGGGTCCACCATCCTCACAAGGAAAGCCTGGGCCTCTCTCTTTGGACTTTGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCTTGAAGGTCCTGCTGGAAAGGCTCCGAGAGTGCATCTGAGCTGGTGTAGGCACACTTTCCTACTTTaGGGCATGGGGCACTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: ELEGPAGKAPRVHLSWCRHTFLL*GMGHWL Trigger: GAGCCAGTGCCCCATGCCCCAAAGTAGGAAAGTGTG...CCTACACCAGCTCAGATGCACTCTCGGAGCCTTTCCAGCAGGACCTTCAAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR GCA 90 bp | GGCACTAGGAAGGCATGCATTCTGTACTGCACACTGACGTGGGGCCAGTCCCTGGTGGCATGGTCAACATaGCAACAGTCTCCCAAGACA | + |
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Preference number: 2 (lower is better) Translates to: GTRKACILYCTLTWGQSLVAWST*QQSPKT Trigger: TGTCTTGGGAGACTGTTGGCATGTTGACCATGCCAC...CAGGGACTGGCCCCACGTCAGTGTGCAGTACAGAATGCATGCCTTCCTAGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGCTGGCCCTGTGGGACAGCACCACACACTTTCCTACTTTGGGGCATGGGGGCTCTGGTCATTTATaGAGAGATATATGTAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: WRLALWDSTTHFPTLGHGGSGHL*RDICSP Trigger: AGGGCTACATATATCTCTCCATAAATGACCAGAGCC...CCCATGCCCCAAAGTAGGAAAGTGTGTGGTGCTGTCCCACAGGGCCAGCCTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGTCCTGCAAAGTCCAAAGAGAGAGGCCCAGGCTTTCCTTGTGAGGATGGTGCCCAATGCCAGAAGTTaGCATTTGGTGAGGTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: RVLQSPKREAQAFLVRMVPNARS*HLVRWG Trigger: ACCCCACCTCACCAAATGCCAACTTCTGGCATTGGG...CACCATCCTCACAAGGAAAGCCTGGGCCTCTCTCTTTGGACTTTGCAGGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAGGCTGGCCCTGTGGGACAGCACCACACACTTTCCTACTTTGGGGCATGGGCCTTCTTCCTTTTTCTaGACCTCTAGAAATATGGCA | + |
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Preference number: 2 (lower is better) Translates to: WRLALWDSTTHFPTLGHGPSSFF*TSRNMA Trigger: TGCCATATTTCTAGAGGTTCAGAAAAAGGAAGAAGG...CCCATGCCCCAAAGTAGGAAAGTGTGTGGTGCTGTCCCACAGGGCCAGCCTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR CCA 90 bp | TGCGTAAGAGAGCTTGAAGGTCCTGCTGGAAAGGCTCCGAGAGTGCATCTGAGCTGGCATTTGGTGAGGTaGGGTTGTAAACATAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: CVRELEGPAGKAPRVHLSWHLVR*GCKHSL Trigger: GAGGCTATGTTTACAACCCCACCTCACCAAATGCCA...GCTCAGATGCACTCTCGGAGCCTTTCCAGCAGGACCTTCAAGCTCTCTTACGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCAAAGTCCAAAGAGAGAGGCCCAGGCTTTCCTTGTGAGGATGGTGGACCCGTGTAACTGCAGGCCATaGATCCCCTTATACAAATCA | + |
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Preference number: 2 (lower is better) Translates to: LQSPKREAQAFLVRMVDPCNCRP*IPLYKS Trigger: TGATTTGTATAAGGGGATTCATGGCCTGCAGTTACA...CGGGTCCACCATCCTCACAAGGAAAGCCTGGGCCTCTCTCTTTGGACTTTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGTCCTGCAAAGTCCAAAGAGAGAGGCCCAGGCTTTCCTTGTGAGGATGGTGTCAGCTAAGGATAGGTaGCATGGTCAACATGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: RVLQSPKREAQAFLVRMVSAKDR*HGQHAN Trigger: GTTGGCATGTTGACCATGCCACCTATCCTTAGCTGA...CACCATCCTCACAAGGAAAGCCTGGGCCTCTCTCTTTGGACTTTGCAGGACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR CCA 90 bp | GGCACTAGGAAGGCATGCATTCTGTACTGCACACTGACGTGGGGCCAGTCCCTGTTGTCAAGTCAGCTCTaGCTATGTCTTCTTTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: GTRKACILYCTLTWGQSLLSSQL*LCLLFQ Trigger: CTGAAAAAGAAGACATAGCCAGAGCTGACTTGACAA...CAGGGACTGGCCCCACGTCAGTGTGCAGTACAGAATGCATGCCTTCCTAGTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR TCA 90 bp | GCACTGGCTCACATGGACAATCAAAAGGACAGCCAAAAATGTTCCAAGCATTTTTTCTGTACTGCACACTaGCGTGGGGCCAGTCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: ALAHMDNQKDSQKCSKHFFCTAH*RGASPW Trigger: CCAGGGACTGGCCCCACGTCAGTGTGCAGTACAGAA...AAAATGCTTGGAACATTTTTGGCTGTCCTTTTGATTGTCCATGTGAGCCAGTGC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTGTGCAAAGGTAGCTTTCATACTCAGAGTATTTTGTAAGTGTGCAAGGCATTCCTGGGTCCCTGTGTaGCAGTGGGCACTAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: ECAKVAFILRVFCKCARHSWVPV*QWALGR Trigger: CCTTCCTAGTGCCCACTGTCACACAGGGACCCAGGA...ATGCCTTGCACACTTACAAAATACTCTGAGTATGAAAGCTACCTTTGCACACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCAAAGTCCAAAGAGAGAGGCCCAGGCTTTCCTTGTGAGGATGGTGGACCCGCCCTTTCGAAACGTGTaGTTTTTAAAGTCAGAGATT | + |
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Preference number: 2 (lower is better) Translates to: LQSPKREAQAFLVRMVDPPFRNV*FLKSEI Trigger: AATCTCTGACTTTAAAAAGCACACGTTTCGAAAGGG...CGGGTCCACCATCCTCACAAGGAAAGCCTGGGCCTCTCTCTTTGGACTTTGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR CCA 90 bp | TGCGTAAGAGAGCTTGAAGGTCCTGCTGGAAAGGCTCCGAGAGTGCATCTGAGCTACAAAAGATGGCTCTaGTCATTTATGGAGAGATAT | + |
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Preference number: 2 (lower is better) Translates to: CVRELEGPAGKAPRVHLSYKRWL*SFMERY Trigger: ATATCTCTCCATAAATGACCAGAGCCATCTTTTGTA...GCTCAGATGCACTCTCGGAGCCTTTCCAGCAGGACCTTCAAGCTCTCTTACGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR TCA 90 bp | GTTGTGTGTAGACCCAGATTTTCAAGTGCTGAATGGTTTCAAAGCAAGGCTTTCGTACCCGAGTTTCTGTaGCTGAGTCTGTCTGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: VVCRPRFSSAEWFQSKAFVPEFL*LSLSES Trigger: GCTTTCAGACAGACTCAGTCACAGAAACTCGGGTAC...GAAAGCCTTGCTTTGAAACCATTCAGCACTTGAAAATCTGGGTCTACACACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR GCA 90 bp | GTTGTGTGTAGACCCAGATTTTCAAGTGCTGAATGGTTTCAAAGCAAGGCTTTCGGCACTAGGAAGGCATaGATTCTGTACTGCACACTG | + |
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Preference number: 2 (lower is better) Translates to: VVCRPRFSSAEWFQSKAFGTRKA*ILYCTL Trigger: CAGTGTGCAGTACAGAATGCATGCCTTCCTAGTGCC...GAAAGCCTTGCTTTGAAACCATTCAGCACTTGAAAATCTGGGTCTACACACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR CCA 90 bp | GTTGTGTGTAGACCCAGATTTTCAAGTGCTGAATGGTTTCAAAGCAAGGCTTTCAAGAGCTGGTCACAGTaGTACCCGAGTTTCTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: VVCRPRFSSAEWFQSKAFKSWSQ*YPSFCD Trigger: GTCACAGAAACTCGGGTACCACTGTGACCAGCTCTT...GAAAGCCTTGCTTTGAAACCATTCAGCACTTGAAAATCTGGGTCTACACACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGTCCTGCAAAGTCCAAAGAGAGAGGCCCAGGCTTTCCTTGTGAGGATGGTGACAAATTACAAAAGATaGCTCTGGTCATTTATGGAG | + |
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Preference number: 2 (lower is better) Translates to: RVLQSPKREAQAFLVRMVTNYKR*LWSFME Trigger: CTCCATAAATGACCAGAGCCATCTTTTGTAATTTGT...CACCATCCTCACAAGGAAAGCCTGGGCCTCTCTCTTTGGACTTTGCAGGACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR TCA 90 bp | GATCCAGAATCAGGACAGTCCACGTTTTTATTTATTTACACCGAGATGACCTCACCGAGTTTCTGTGACTaGGTCTGTCTGAAAGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: DPESGQSTFLFIYTEMTSPSFCD*VCLKAK Trigger: CTTGGCTTTCAGACAGACTCAGTCACAGAAACTCGG...TGAGGTCATCTCGGTGTAAATAAATAAAAACGTGGACTGTCCTGATTCTGGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR GCA 90 bp | CATTTTAACTGTTTACTGGGCACAGTGCTACAAATTACAAAAGATGGCTCTGGTCTGTCTGCTGTAGGTTaGTGGCTGTTCTATGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: HFNCLLGTVLQITKDGSGLSAVG*WLFYEA Trigger: TGCTTCATAGAACAGCCAGCAACCTACAGCAGACAG...ACCAGAGCCATCTTTTGTAATTTGTAGCACTGTGCCCAGTAAACAGTTAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGATATATGTAGCCCTTTCGAAACGTGTGCTTTTTAAAGTCAGAGATTCTGAACCTCTAGAAATATaGCACCTGTCAGCTAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: GEIYVALSKRVLFKVRDSEPLEI*HLSAKD Trigger: ATCCTTAGCTGACAGGTGCCATATTTCTAGAGGTTC...AGAATCTCTGACTTTAAAAAGCACACGTTTCGAAAGGGCTACATATATCTCTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR CCA 72 bp | CGCTCTCCCCAAGGCTCCTGCGCACTAGCTGGAGGCTaGCCCTGTGGGACAGCACCACACACTTTCCTACTT | + |
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Preference number: 3 (lower is better) Translates to: RSPQGSCALAGG*PCGTAPHTFLL Trigger: AAGTAGGAAAGTGTGTGGTGCTGTCCCACAGGGCCAGCCTCCAGCTAGTGCGCAGGAGCCTTGGGGAGAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR CCA 72 bp | CCAAGGCTCCTGCGCACTAGCTGGAGGCTGGCCCTGTaGGACAGCACCACACACTTTCCTACTTTGGGGCAT | + |
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Preference number: 3 (lower is better) Translates to: PRLLRTSWRLAL*DSTTHFPTLGH Trigger: ATGCCCCAAAGTAGGAAAGTGTGTGGTGCTGTCCCACAGGGCCAGCCTCCAGCTAGTGCGCAGGAGCCTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR GCA 72 bp | CTGGGTCCCTGTGTGACAGTGGGCACTAGGAAGGCATaGATTCTGTACTGCACACTGACGTGGGGCCAGTCC | + |
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Preference number: 3 (lower is better) Translates to: LGPCVTVGTRKA*ILYCTLTWGQS Trigger: GGACTGGCCCCACGTCAGTGTGCAGTACAGAATGCATGCCTTCCTAGTGCCCACTGTCACACAGGGACCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR TCA 72 bp | TGGGCACTAGGAAGGCATGCATTCTGTACTGCACACTaGCGTGGGGCCAGTCCCTGGGTGTTCTTTCCCCCT | + |
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Preference number: 3 (lower is better) Translates to: WALGRHAFCTAH*RGASPWVFFPP Trigger: AGGGGGAAAGAACACCCAGGGACTGGCCCCACGTCAGTGTGCAGTACAGAATGCATGCCTTCCTAGTGCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR TCA 72 bp | CCTTGTGAGGATGGTGGACCCGAGGCTGATGGACAGTaGTGCGTAAGAGAGCTTGAAGGTCCTGCTGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: PCEDGGPEADGQ*CVRELEGPAGK Trigger: CTTTCCAGCAGGACCTTCAAGCTCTCTTACGCATCACTGTCCATCAGCCTCGGGTCCACCATCCTCACAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR CCA 72 bp | ACTAGGAAGGCATGCATTCTGTACTGCACACTGACGTaGGGCCAGTCCCTGGGTGTTCTTTCCCCCTTCAAC | + |
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Preference number: 3 (lower is better) Translates to: TRKACILYCTLT*GQSLGVLSPFN Trigger: GTTGAAGGGGGAAAGAACACCCAGGGACTGGCCCCACGTCAGTGTGCAGTACAGAATGCATGCCTTCCTAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR CCA 72 bp | TGGCCCTGTGGGACAGCACCACACACTTTCCTACTTTaGGGCATGGGGCACTGGCTCACATGGACAATCAAA | + |
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Preference number: 3 (lower is better) Translates to: WPCGTAPHTFLL*GMGHWLTWTIK Trigger: TTTGATTGTCCATGTGAGCCAGTGCCCCATGCCCCAAAGTAGGAAAGTGTGTGGTGCTGTCCCACAGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR CAA 90 bp | GAGCTTGAAGGTCCTGCTGGAAAGGCTCCGAGAGTGCATCTGAGCTGGTGTAGGGCCAGAAGTTGGCATTaGGTGAGGTGGGGTTGTAAA | + |
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Preference number: 3 (lower is better) Translates to: ELEGPAGKAPRVHLSWCRARSWH*VRWGCK Trigger: TTTACAACCCCACCTCACCAAATGCCAACTTCTGGC...CCTACACCAGCTCAGATGCACTCTCGGAGCCTTTCCAGCAGGACCTTCAAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR CCA 72 bp | GTGGGACAGCACCACACACTTTCCTACTTTGGGGCATaGGGCACTGGCTCACATGGACAATCAAAAGGACAG | + |
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Preference number: 3 (lower is better) Translates to: VGQHHTLSYFGA*GTGSHGQSKGQ Trigger: CTGTCCTTTTGATTGTCCATGTGAGCCAGTGCCCCATGCCCCAAAGTAGGAAAGTGTGTGGTGCTGTCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR CAA 90 bp | GGCACTAGGAAGGCATGCATTCTGTACTGCACACTGACGTGGGGCCAGTCCCTGTCTGAGTGTGAACAATaGTCAAGTCAGCTCTGGCTA | + |
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Preference number: 3 (lower is better) Translates to: GTRKACILYCTLTWGQSLSECEQ*SSQLWL Trigger: TAGCCAGAGCTGACTTGACAATTGTTCACACTCAGA...CAGGGACTGGCCCCACGTCAGTGTGCAGTACAGAATGCATGCCTTCCTAGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR CCA 72 bp | TCAAAGCAAGGCTTTCTGCTGTCTGCTGTAGGTTGCTaGCTGTTCTATGAAGCACCCACCGGAAGCAGCACT | + |
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Preference number: 3 (lower is better) Translates to: SKQGFLLSAVGC*LFYEAPTGSST Trigger: AGTGCTGCTTCCGGTGGGTGCTTCATAGAACAGCCAGCAACCTACAGCAGACAGCAGAAAGCCTTGCTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR TCA 72 bp | CTTTCTGCTGTCTGCTGTAGGTTGCTGGCTGTTCTATaGAGCACCCACCGGAAGCAGCACTTCTGGATTCTA | + |
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Preference number: 3 (lower is better) Translates to: LSAVCCRLLAVL*STHRKQHFWIL Trigger: TAGAATCCAGAAGTGCTGCTTCCGGTGGGTGCTTCATAGAACAGCCAGCAACCTACAGCAGACAGCAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR TCA 72 bp | TTGGCATTGATCCCAATGCCAGAAGTTGGCATTTGGTaGGGTGGGGTTGTAAACATAGCCTCACTGGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: LALIPMPEVGIW*GGVVNIASLGG Trigger: ACCTCCCAGTGAGGCTATGTTTACAACCCCACCTCACCAAATGCCAACTTCTGGCATTGGGATCAATGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR CCA 72 bp | CCTCTAGAAATATGGCACCTGTCAGCTAAGGATAGGTaGCATGGTCAACATGCCAACAGTCTCCCAAGACAG | + |
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Preference number: 3 (lower is better) Translates to: PLEIWHLSAKDR*HGQHANSLPRQ Trigger: CTGTCTTGGGAGACTGTTGGCATGTTGACCATGCCACCTATCCTTAGCTGACAGGTGCCATATTTCTAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR CCA 72 bp | ATTGATCCCAATGCCAGAAGTTGGCATTTGGTGAGGTaGGGTTGTAAACATAGCCTCACTGGGAGGTCTGGT | + |
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Preference number: 3 (lower is better) Translates to: IDPNARSWHLVR*GCKHSLTGRSG Trigger: ACCAGACCTCCCAGTGAGGCTATGTTTACAACCCCACCTCACCAAATGCCAACTTCTGGCATTGGGATCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR-3UTR CAA 90 bp | GATCCAGAATCAGGACAGTCCACGTTTTTATTTATTTACACCGAGATGACCTCATCCCAATGCCAGAAGTaGGCATTTGGTGAGGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: DPESGQSTFLFIYTEMTSSQCQK*AFGEVG Trigger: CCCCACCTCACCAAATGCCAACTTCTGGCATTGGGA...TGAGGTCATCTCGGTGTAAATAAATAAAAACGTGGACTGTCCTGATTCTGGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR TCA 72 bp | CCCACGATTAAACAGAATCTGGGGATAGTTTGGCATTaGTCCCAATGCCAGAAGTTGGCATTTGGTGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: PTIKQNLGIVWH*SQCQKLAFGEV Trigger: CACCTCACCAAATGCCAACTTCTGGCATTGGGATCAATGCCAAACTATCCCCAGATTCTGTTTAATCGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR TCA 72 bp | CAGGACAGTCCACGTTTTTATTTATTTACACCGAGATaGCCTCAGAGTCCTGCAAAGTCCAAAGAGAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: QDSPRFYLFTPR*PQSPAKSKERG Trigger: GCCTCTCTCTTTGGACTTTGCAGGACTCTGAGGTCATCTCGGTGTAAATAAATAAAAACGTGGACTGTCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR GCA 72 bp | TTTTTATTTATTTACACCGAGATGACCTCAGAGTCCTaGAAAGTCCAAAGAGAGAGGCCCAGGCTTTCCTTG | + |
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Preference number: 3 (lower is better) Translates to: FLFIYTEMTSES*KVQRERPRLSL Trigger: CAAGGAAAGCCTGGGCCTCTCTCTTTGGACTTTGCAGGACTCTGAGGTCATCTCGGTGTAAATAAATAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR GCA 72 bp | AAACGTGTGCTTTTTAAAGTCAGAGATTCTCCTGCCTaGTTCCCCAGCATACCTCATAACCTGTTATTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: KRVLFKVRDSPA*FPSIPHNLLFV Trigger: TACAAATAACAGGTTATGAGGTATGCTGGGGAAGCAGGCAGGAGAATCTCTGACTTTAAAAAGCACACGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| 3UTR CCA 72 bp | GTGCTACAAATTACAAAAGATGGCTCTGGTCATTTATaGAGAGATATATGTAGCCCTTTCGAAACGTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: VLQITKDGSGHL*RDICSPFETCA Trigger: AGCACACGTTTCGAAAGGGCTACATATATCTCTCCATAAATGACCAGAGCCATCTTTTGTAATTTGTAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR CCA 90 bp | GGCACTAGGAAGGCATGCATTCTGTACTGCACACTGACGTGGGGCCAGTCCCTGGCACGGAGGAGTCGGTaGGCACTGGCTTCTGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GTRKACILYCTLTWGQSLARRSR*ALASGR Trigger: GCGACCAGAAGCCAGTGCCCACCGACTCCTCCGTGC...CAGGGACTGGCCCCACGTCAGTGTGCAGTACAGAATGCATGCCTTCCTAGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGGCTGGCCCTGTGGGACAGCACCACACACTTTCCTACTTTGGGGCATGGGTGGGGTGTGTGTGGATaGCTCTGTGAGCAAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: WRLALWDSTTHFPTLGHGWGVCG*LCEQGG Trigger: GCCTCCTTGCTCACAGAGTCATCCACACACACCCCA...CCCATGCCCCAAAGTAGGAAAGTGTGTGGTGCTGTCCCACAGGGCCAGCCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTTGAAGGTCCTGCTGGAAAGGCTCCGAGAGTGCATCTGAGCTGGTGTAGGAAGTCTGCTTTCCGCTaGCTGGGGCTCCGGCGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELEGPAGKAPRVHLSWCRKSAFR*LGLRRK Trigger: CTTGCGCCGGAGCCCCAGCCAGCGGAAAGCAGACTT...CCTACACCAGCTCAGATGCACTCTCGGAGCCTTTCCAGCAGGACCTTCAAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGGCTGGCCCTGTGGGACAGCACCACACACTTTCCTACTTTGGGGCATGGGGGGAGCCGGGCTATCTaGTTGGATGGGCTGTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: WRLALWDSTTHFPTLGHGGSRAI*LDGLSC Trigger: ACATGACAGCCCATCCAACCAGATAGCCCGGCTCCC...CCCATGCCCCAAAGTAGGAAAGTGTGTGGTGCTGTCCCACAGGGCCAGCCTCCA 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTTGAAGGTCCTGCTGGAAAGGCTCCGAGAGTGCATCTGAGCTGGTGTAGGCCCCTGGGTCTGCGATaGTGTGGATGCTCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ELEGPAGKAPRVHLSWCRPLGLR*CGCSPG Trigger: TCCTGGTGAGCATCCACATCATCGCAGACCCAGGGG...CCTACACCAGCTCAGATGCACTCTCGGAGCCTTTCCAGCAGGACCTTCAAGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR TCA 90 bp | GGCACTAGGAAGGCATGCATTCTGTACTGCACACTGACGTGGGGCCAGTCCCTGTGGGGGACCCTTTGGTaGAGAGAGGGTGGGAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: GTRKACILYCTLTWGQSLWGTLW*REGGKH Trigger: GTGTTTCCCACCCTCTCTTCACCAAAGGGTCCCCCA...CAGGGACTGGCCCCACGTCAGTGTGCAGTACAGAATGCATGCCTTCCTAGTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGGAACAGAACACGCCCATGCTTTTCTTTCCCACGATTAAACAGAATCTGGCGCTCTGTGTGGTGGTaGCGCCAGGGCGGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGNRTRPCFSFPRLNRIWRSVWW*RQGGCC Trigger: GCAGCAGCCGCCCTGGCGTCACCACCACACAGAGCG...CCAGATTCTGTTTAATCGTGGGAAAGAAAAGCATGGGCGTGTTCTGTTCCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGGCTGGCCCTGTGGGACAGCACCACACACTTTCCTACTTTGGGGCATGGGGGAGGCATCAGAAGCTaGGAGAGCAGGAGTAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: WRLALWDSTTHFPTLGHGGGIRS*ESRSSC Trigger: ACAACTACTCCTGCTCTCTCAGCTTCTGATGCCTCC...CCCATGCCCCAAAGTAGGAAAGTGTGTGGTGCTGTCCCACAGGGCCAGCCTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR GCA 90 bp | TGCGTAAGAGAGCTTGAAGGTCCTGCTGGAAAGGCTCCGAGAGTGCATCTGAGCGGGCTGTCTGGCTGCTaGCCTGTCCTGTGTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CVRELEGPAGKAPRVHLSGLSGC*PVLCLV Trigger: CACCAAACACAGGACAGGGCAGCAGCCAGACAGCCC...GCTCAGATGCACTCTCGGAGCCTTTCCAGCAGGACCTTCAAGCTCTCTTACGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTTGAAGGTCCTGCTGGAAAGGCTCCGAGAGTGCATCTGAGCTGGTGTAGGCAGGAAAGGGTCCTGTaGCTCCTCCACAGAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ELEGPAGKAPRVHLSWCRQERVL*LLHRKL Trigger: GAGCTTTCTGTGGAGGAGGCACAGGACCCTTTCCTG...CCTACACCAGCTCAGATGCACTCTCGGAGCCTTTCCAGCAGGACCTTCAAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR GCA 90 bp | TGCGTAAGAGAGCTTGAAGGTCCTGCTGGAAAGGCTCCGAGAGTGCATCTGAGCTTGTCGATGGCCTCCTaGAGTGGCTGTGACTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CVRELEGPAGKAPRVHLSLSMAS*SGCDSP Trigger: AGGGGAGTCACAGCCACTGCAGGAGGCCATCGACAA...GCTCAGATGCACTCTCGGAGCCTTTCCAGCAGGACCTTCAAGCTCTCTTACGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAAAGTCCAAAGAGAGAGGCCCAGGCTTTCCTTGTGAGGATGGTGGACCCGTGTGTGTTATACTCCTaGTTGTCCCCAGGGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LQSPKREAQAFLVRMVDPCVLYS*LSPGSR Trigger: CCGGCTCCCTGGGGACAAGCAGGAGTATAACACACA...CGGGTCCACCATCCTCACAAGGAAAGCCTGGGCCTCTCTCTTTGGACTTTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGGCTGGCCCTGTGGGACAGCACCACACACTTTCCTACTTTGGGGCATGGGACTGGGTGCAGAATATaGAGAGACCACAGACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WRLALWDSTTHFPTLGHGTGCRI*RDHRQV Trigger: GACCTGTCTGTGGTCTCTGCATATTCTGCACCCAGT...CCCATGCCCCAAAGTAGGAAAGTGTGTGGTGCTGTCCCACAGGGCCAGCCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAAAGTCCAAAGAGAGAGGCCCAGGCTTTCCTTGTGAGGATGGTGGACCCGGGGTCTGCGATGATGTaGATGCTCACCAGGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQSPKREAQAFLVRMVDPGSAMM*MLTRKG Trigger: CCCTTTCCTGGTGAGCATCCACATCATCGCAGACCC...CGGGTCCACCATCCTCACAAGGAAAGCCTGGGCCTCTCTCTTTGGACTTTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTTGAAGGTCCTGCTGGAAAGGCTCCGAGAGTGCATCTGAGCTGGTGTAGGAACACAGGCAGTGTCTaGGCTTACCTCACTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ELEGPAGKAPRVHLSWCRNTGSV*AYLTGS Trigger: GCTGCCAGTGAGGTAAGCCCAGACACTGCCTGTGTT...CCTACACCAGCTCAGATGCACTCTCGGAGCCTTTCCAGCAGGACCTTCAAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGGCTGGCCCTGTGGGACAGCACCACACACTTTCCTACTTTGGGGCATGGGTTGGTGAAGAGAGGGTaGGAAACACAGGCAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WRLALWDSTTHFPTLGHGLVKRG*ETQAVS Trigger: AGACACTGCCTGTGTTTCCCACCCTCTCTTCACCAA...CCCATGCCCCAAAGTAGGAAAGTGTGTGGTGCTGTCCCACAGGGCCAGCCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| 3UTR CAA 72 bp | CTGGCCCTGTGGGACAGCACCACACACTTTCCTACTTaGGGGCATGGGGCACTGGCTCACATGGACAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LALWDSTTHFPT*GHGALAHMDNQ Trigger: TTGATTGTCCATGTGAGCCAGTGCCCCATGCCCCAAAGTAGGAAAGTGTGTGGTGCTGTCCCACAGGGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR TCA 90 bp | TGCGTAAGAGAGCTTGAAGGTCCTGCTGGAAAGGCTCCGAGAGTGCATCTGAGCGGCGACAGTAGATGGTaGAGCGCACGATTTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CVRELEGPAGKAPRVHLSGDSRW*SARFPC Trigger: GCAAGGAAATCGTGCGCTTCACCATCTACTGTCGCC...GCTCAGATGCACTCTCGGAGCCTTTCCAGCAGGACCTTCAAGCTCTCTTACGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTCCTGCAAAGTCCAAAGAGAGAGGCCCAGGCTTTCCTTGTGAGGATGGTGTGGTGTGTCGACCGCTaGAGGAGGAGCAGAATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVLQSPKREAQAFLVRMVWCVDR*RRSRMW Trigger: CCACATTCTGCTCCTCCTGCAGCGGTCGACACACCA...CACCATCCTCACAAGGAAAGCCTGGGCCTCTCTCTTTGGACTTTGCAGGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR CCA 90 bp | TGCGTAAGAGAGCTTGAAGGTCCTGCTGGAAAGGCTCCGAGAGTGCATCTGAGCCCAAAACCTTGTCGATaGCCTCCTGCAGTGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CVRELEGPAGKAPRVHLSPKPCR*PPAVAV Trigger: CACAGCCACTGCAGGAGGCCATCGACAAGGTTTTGG...GCTCAGATGCACTCTCGGAGCCTTTCCAGCAGGACCTTCAAGCTCTCTTACGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTCCTGCAAAGTCCAAAGAGAGAGGCCCAGGCTTTCCTTGTGAGGATGGTGGAAGATGCAGAAGTCTaGTTTCCGCTGGCTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RVLQSPKREAQAFLVRMVEDAEV*FPLAGA Trigger: AGCCCCAGCCAGCGGAAAGCAGACTTCTGCATCTTC...CACCATCCTCACAAGGAAAGCCTGGGCCTCTCTCTTTGGACTTTGCAGGACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR TCA 90 bp | GCACTGGCTCACATGGACAATCAAAAGGACAGCCAAAAATGTTCCAAGCATTTTGACCACAGACAGGTCTaGGGAGGACAGCCGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALAHMDNQKDSQKCSKHFDHRQV*GGQPQA Trigger: GGCCTGCGGCTGTCCTCCTCAGACCTGTCTGTGGTC...AAAATGCTTGGAACATTTTTGGCTGTCCTTTTGATTGTCCATGTGAGCCAGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR GCA 90 bp | CTAGAAATATGGCACCTGTCAGCTAAGGATAGGTGGCATGGTCAACATGCCAACCTGGCCAGTGGCTACTaGATCTCTCAGAGGAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LEIWHLSAKDRWHGQHANLASGY*ISQRRG Trigger: CCCTCTCCTCTGAGAGATGCAGTAGCCACTGGCCAG...GTTGGCATGTTGACCATGCCACCTATCCTTAGCTGACAGGTGCCATATTTCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR GCA 90 bp | GAGTGTGCAAAGGTAGCTTTCATACTCAGAGTATTTTGTAAGTGTGCAAGGCATTCGTGGTCCTCAGTCTaGCAGCGCCCCTCGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: ECAKVAFILRVFCKCARHSWSSV*QRPSLM Trigger: CATCAGCGAGGGGCGCTGGCAGACTGAGGACCACGA...ATGCCTTGCACACTTACAAAATACTCTGAGTATGAAAGCTACCTTTGCACACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTCCTGCAAAGTCCAAAGAGAGAGGCCCAGGCTTTCCTTGTGAGGATGGTGGTAAAACCTACTGGGTaGAGAATATGCAGAGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: RVLQSPKREAQAFLVRMVVKPTG*RICRDH Trigger: GTGGTCTCTGCATATTCTGCACCCAGTAGGTTTTAC...CACCATCCTCACAAGGAAAGCCTGGGCCTCTCTCTTTGGACTTTGCAGGACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAGATATATGTAGCCCTTTCGAAACGTGTGCTTTTTAAAGTCAGAGATTCTCTCCTGCAGTGGCTGTaGCTCCCCTGGGTCTGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: GEIYVALSKRVLFKVRDSLLQWL*LPWVCD Trigger: ATCGCAGACCCAGGGGAGTCACAGCCACTGCAGGAG...AGAATCTCTGACTTTAAAAAGCACACGTTTCGAAAGGGCTACATATATCTCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR CCA 90 bp | GATCCAGAATCAGGACAGTCCACGTTTTTATTTATTTACACCGAGATGACCTCATGGCTGTGGTTCAGTTaGGGAAGGGCCTCCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DPESGQSTFLFIYTEMTSWLWFS*GRASTG Trigger: CCCAGTGGAGGCCCTTCCCCAACTGAACCACAGCCA...TGAGGTCATCTCGGTGTAAATAAATAAAAACGTGGACTGTCCTGATTCTGGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR GCA 90 bp | GAGTGTGCAAAGGTAGCTTTCATACTCAGAGTATTTTGTAAGTGTGCAAGGCATCCACAGAAAGCTCACTaGTGGTGGAGGACAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ECAKVAFILRVFCKCARHPQKAH*WWRTGG Trigger: GCCACCTGTCCTCCACCAGCAGTGAGCTTTCTGTGG...ATGCCTTGCACACTTACAAAATACTCTGAGTATGAAAGCTACCTTTGCACACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTGTGTAGACCCAGATTTTCAAGTGCTGAATGGTTTCAAAGCAAGGCTTTCCAGAAAGCTCACTGCTaGTGGAGGACAGGTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VVCRPRFSSAEWFQSKAFQKAHC*WRTGGC Trigger: ACAGCCACCTGTCCTCCACCAGCAGTGAGCTTTCTG...GAAAGCCTTGCTTTGAAACCATTCAGCACTTGAAAATCTGGGTCTACACACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGGAACAGAACACGCCCATGCTTTTCTTTCCCACGATTAAACAGAATCTGGAGGAGGAGCAGAATGTaGTTTCTTCTCAGAGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGNRTRPCFSFPRLNRIWRRSRM*FLLRGV Trigger: CACTCCTCTGAGAAGAAACCACATTCTGCTCCTCCT...CCAGATTCTGTTTAATCGTGGGAAAGAAAAGCATGGGCGTGTTCTGTTCCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGTGCAAAGGTAGCTTTCATACTCAGAGTATTTTGTAAGTGTGCAAGGCATTCATGTAGGGCTGTCTaGCTGCTGCCCTGTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ECAKVAFILRVFCKCARHSCRAV*LLPCPV Trigger: CACAGGACAGGGCAGCAGCCAGACAGCCCTACATGA...ATGCCTTGCACACTTACAAAATACTCTGAGTATGAAAGCTACCTTTGCACACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR TCA 90 bp | CATTTTAACTGTTTACTGGGCACAGTGCTACAAATTACAAAAGATGGCTCTGGTTCCCGGGAGCCAGAGTaGAGAAGTCCTGACTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HFNCLLGTVLQITKDGSGSREPE*RSPDCK Trigger: CTTGCAGTCAGGACTTCTTCACTCTGGCTCCCGGGA...ACCAGAGCCATCTTTTGTAATTTGTAGCACTGTGCCCAGTAAACAGTTAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTAGCTTTCATACTCAGAGTATTTTGTAAGTGTGCAAGGCATTGGGTACTCCTTGGGACTCTTGTGTaGTGGCCAGTGGCTACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KVAFILRVFCKCARHWVLLGTLV*WPVATA Trigger: TGCAGTAGCCACTGGCCAGCACACAAGAGTCCCAAG...GAGTACCCAATGCCTTGCACACTTACAAAATACTCTGAGTATGAAAGCTACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR CCA 90 bp | GATCCAGAATCAGGACAGTCCACGTTTTTATTTATTTACACCGAGATGACCTCACACCCTGTGTGGCTTTaGGGTCATGACATGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DPESGQSTFLFIYTEMTSHPVWL*GHDMGC Trigger: ACACCCCATGTCATGACCCCAAAGCCACACAGGGTG...TGAGGTCATCTCGGTGTAAATAAATAAAAACGTGGACTGTCCTGATTCTGGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR GCA 90 bp | GATCCAGAATCAGGACAGTCCACGTTTTTATTTATTTACACCGAGATGACCTCAAGGCAGGGCTGGAGGTaGTCGACTGTGTGTTATACT | + |
|
Preference number: 4 (lower is better) Translates to: DPESGQSTFLFIYTEMTSRQGWR*STVCYT Trigger: AGTATAACACACAGTCGAGCACCTCCAGCCCTGCCT...TGAGGTCATCTCGGTGTAAATAAATAAAAACGTGGACTGTCCTGATTCTGGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR CCA 90 bp | GATCCAGAATCAGGACAGTCCACGTTTTTATTTATTTACACCGAGATGACCTCAAGACACTCGGAACAGTaGGAGATCAGGGTGAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: DPESGQSTFLFIYTEMTSRHSEQ*EIRVNP Trigger: TGGGTTCACCCTGATCTCCCACTGTTCCGAGTGTCT...TGAGGTCATCTCGGTGTAAATAAATAAAAACGTGGACTGTCCTGATTCTGGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGTGCAAAGGTAGCTTTCATACTCAGAGTATTTTGTAAGTGTGCAAGGCATGTGCTCTGCTGTACTTaGGGGCCTTTTTGTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ECAKVAFILRVFCKCARHVLCCT*GPFCVS Trigger: GGACACACAAAAAGGCCCCCAAGTACAGCAGAGCAC...ATGCCTTGCACACTTACAAAATACTCTGAGTATGAAAGCTACCTTTGCACACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| 3UTR CAA 72 bp | GGCCAGTCCCTGGGTGTTCTTTCCCCCTTCAACACTTaGGCCTTAGTTATTTTACTTTCTGAGTGTGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: GQSLGVLSPFNT*ALVILLSECEQ Trigger: TTGTTCACACTCAGAAAGTAAAATAACTAAGGCCAAAGTGTTGAAGGGGGAAAGAACACCCAGGGACTGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTAGCTTTCATACTCAGAGTATTTTGTAAGTGTGCAAGGCATTGGGTACTCTGTGTCCTCTGTGCCTaGAGAAGGATCTTGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KVAFILRVFCKCARHWVLCVLCA*RRILLP Trigger: TGGCAACAAGATCCTTCTGCAGGCACAGAGGACACA...GAGTACCCAATGCCTTGCACACTTACAAAATACTCTGAGTATGAAAGCTACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR GCA 90 bp | GGAGAGATATATGTAGCCCTTTCGAAACGTGTGCTTTTTAAAGTCAGAGATTCTGCAGAAGGATCTTGTTaGCATCGTGGTCCTCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GEIYVALSKRVLFKVRDSAEGSC*HRGPQS Trigger: AGACTGAGGACCACGATGGCAACAAGATCCTTCTGC...AGAATCTCTGACTTTAAAAAGCACACGTTTCGAAAGGGCTACATATATCTCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR GCA 90 bp | GTTGTGTGTAGACCCAGATTTTCAAGTGCTGAATGGTTTCAAAGCAAGGCTTTCTTTGTGTGTCCTCTGTaGCTGCAGAAGGATCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VVCRPRFSSAEWFQSKAFFVCPL*LQKDLV Trigger: AACAAGATCCTTCTGCAGGCACAGAGGACACACAAA...GAAAGCCTTGCTTTGAAACCATTCAGCACTTGAAAATCTGGGTCTACACACAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGGCTCACATGGACAATCAAAAGGACAGCCAAAAATGTTCCAAGCATTTTCTTTTCAGGGAGAACTaGATGTCCACATCCAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: ALAHMDNQKDSQKCSKHFLFREN*MSTSRL Trigger: CAATCTGGATGTGGACATCCAGTTCTCCCTGAAAAG...AAAATGCTTGGAACATTTTTGGCTGTCCTTTTGATTGTCCATGTGAGCCAGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR TCA 90 bp | CATTTTAACTGTTTACTGGGCACAGTGCTACAAATTACAAAAGATGGCTCTGGTTTCTTCTCAGAGGAGTaGTGTGCTCTGCTGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: HFNCLLGTVLQITKDGSGFFSEE*CALLYL Trigger: CAAGTACAGCAGAGCACATCACTCCTCTGAGAAGAA...ACCAGAGCCATCTTTTGTAATTTGTAGCACTGTGCCCAGTAAACAGTTAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTAGCTTTCATACTCAGAGTATTTTGTAAGTGTGCAAGGCATTGGGTACTCAGAAAATGGGGAAGATaGAGAAGTCTGCTTTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVAFILRVFCKCARHWVLRKWGR*RSLLSA Trigger: AGCGGAAAGCAGACTTCTGCATCTTCCCCATTTTCT...GAGTACCCAATGCCTTGCACACTTACAAAATACTCTGAGTATGAAAGCTACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
||
| CDS-3UTR GCA 90 bp | GTTGTGTGTAGACCCAGATTTTCAAGTGCTGAATGGTTTCAAAGCAAGGCTTTCAACAAAACAAAGACTTaGTTCTCGGGAAAGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VVCRPRFSSAEWFQSKAFNKTKT*FSGKTR Trigger: CCTGGTCTTTCCCGAGAAGCAAGTCTTTGTTTTGTT...GAAAGCCTTGCTTTGAAACCATTCAGCACTTGAAAATCTGGGTCTACACACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS-3UTR CCA 90 bp | GAGTGTGCAAAGGTAGCTTTCATACTCAGAGTATTTTGTAAGTGTGCAAGGCATCCAGATTGGAGAAAATaGGGAAGATGCAGAAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ECAKVAFILRVFCKCARHPDWRK*GRCRSL Trigger: CAGACTTCTGCATCTTCCCCATTTTCTCCAATCTGG...ATGCCTTGCACACTTACAAAATACTCTGAGTATGAAAGCTACCTTTGCACACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS-3UTR CCA 90 bp | GCACTGGCTCACATGGACAATCAAAAGGACAGCCAAAAATGTTCCAAGCATTTTTGTTGTAAAACCTACTaGGTGCAGAATATGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALAHMDNQKDSQKCSKHFCCKTY*VQNMQR Trigger: TCTCTGCATATTCTGCACCCAGTAGGTTTTACAACA...AAAATGCTTGGAACATTTTTGGCTGTCCTTTTGATTGTCCATGTGAGCCAGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR CAA 72 bp | ACTTTAAAATACTTATCATTTAGCCCTTTCCAGAGGTaGGCTTTTTCAGAGGTTGATCCAGAATCAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: TLKYLSFSPFQR*AFSEVDPESGQ Trigger: CTGTCCTGATTCTGGATCAACCTCTGAAAAAGCCAACCTCTGGAAAGGGCTAAATGATAAGTATTTTAAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| 3UTR CAA 72 bp | TTGGCCTTAGTTATTTTACTTTCTGAGTGTGAACAATaGTCAAGTCAGCTCTGGCTATGTCTTCTTTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: LALVILLSECEQ*SSQLWLCLLFQ Trigger: CTGAAAAAGAAGACATAGCCAGAGCTGACTTGACAATTGTTCACACTCAGAAAGTAAAATAACTAAGGCCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 90 bp | GCGCACGATTTCCTTGCCGTAGTGCACCGGCCTGATTGCCCACAGTaGGGTCCCGGGAGCCAGAGTGAAGAAGTCCTGACTGCAAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AHDFLAVVHRPDCPQ*GPGSQSEEVLTARQ Trigger: CTGCCTTGCAGTCAGGACTTCTTCACTCTGGCTCCCGGGACCCCACTGTGGGCAATCAGGCCGGTGCACTACGGCAAGGAAATCGTGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 90 bp | GGGAGCCGGGCTATCTGGTTGGATGGGCTGTCATGTAGGGCTGTCTaGCTGCTGCCCTGTCCTGTGTTTGGTGTGTCGACCGCTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GSRAIWLDGLSCRAV*LLPCPVFGVSTAAG Trigger: TCCTGCAGCGGTCGACACACCAAACACAGGACAGGGCAGCAGCCAGACAGCCCTACATGACAGCCCATCCAACCAGATAGCCCGGCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS TCA 90 bp | TGTCGATGGCCTCCTGCAGTGGCTGTGACTCCCCTGGGTCTGCGATaGTGTGGATGCTCACCAGGAAAGGGTCCTGTGCCTCCTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: CRWPPAVAVTPLGLR*CGCSPGKGPVPPPQ Trigger: CTGTGGAGGAGGCACAGGACCCTTTCCTGGTGAGCATCCACATCATCGCAGACCCAGGGGAGTCACAGCCACTGCAGGAGGCCATCGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 90 bp | GTAGTTGTCTCTGCAGGCCTGGGGGACCCTTTGGTGAAGAGAGGGTaGGAAACACAGGCAGTGTCTGGGCTTACCTCACTGGCAGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VVVSAGLGDPLVKRG*ETQAVSGLTSLAAG Trigger: GCCCGCTGCCAGTGAGGTAAGCCCAGACACTGCCTGTGTTTCCCACCCTCTCTTCACCAAAGGGTCCCCCAGGCCTGCAGAGACAACTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS GCA 90 bp | GATGGTGAAGCGCACGATTTCCTTGCCGTAGTGCACCGGCCTGATTaGCCACAGTGGGGTCCCGGGAGCCAGAGTGAAGAAGTCCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: DGEAHDFLAVVHRPD*PQWGPGSQSEEVLT Trigger: AGTCAGGACTTCTTCACTCTGGCTCCCGGGACCCCACTGTGGGCAATCAGGCCGGTGCACTACGGCAAGGAAATCGTGCGCTTCACCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 90 bp | ATGGCCTCCTGCAGTGGCTGTGACTCCCCTGGGTCTGCGATGATGTaGATGCTCACCAGGAAAGGGTCCTGTGCCTCCTCCACAGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: MASCSGCDSPGSAMM*MLTRKGSCASSTES Trigger: GCTTTCTGTGGAGGAGGCACAGGACCCTTTCCTGGTGAGCATCCACATCATCGCAGACCCAGGGGAGTCACAGCCACTGCAGGAGGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 90 bp | GTGTGTTATACTCCTGCTTGTCCCCAGGGAGCCGGGCTATCTGGTTaGATGGGCTGTCATGTAGGGCTGTCTGGCTGCTGCCCTGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VCYTPACPQGAGLSG*MGCHVGLSGCCPVL Trigger: CAGGACAGGGCAGCAGCCAGACAGCCCTACATGACAGCCCATCCAACCAGATAGCCCGGCTCCCTGGGGACAAGCAGGAGTATAACACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS TCA 90 bp | CTGGTTGTGCGCCTCTCAGACACTCGGAACAGTGGGAGATCAGGGTaGACCCACGCCAAAACCTTGTCGATGGCCTCCTGCAGTGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LVVRLSDTRNSGRSG*THAKTLSMASCSGC Trigger: ACAGCCACTGCAGGAGGCCATCGACAAGGTTTTGGCGTGGGTTCACCCTGATCTCCCACTGTTCCGAGTGTCTGAGAGGCGCACAACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS GCA 90 bp | AAAGACCAGGCAGGGCTGGAGGTGCTCGACTGTGTGTTATACTCCTaGTTGTCCCCAGGGAGCCGGGCTATCTGGTTGGATGGGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KDQAGLEVLDCVLYS*LSPGSRAIWLDGLS Trigger: TGACAGCCCATCCAACCAGATAGCCCGGCTCCCTGGGGACAAGCAGGAGTATAACACACAGTCGAGCACCTCCAGCCCTGCCTGGTCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS GCA 90 bp | TACCTCACTGGCAGCGGGCATAGGTCCTTTCTTGGGACTCTTGTGTaGTGGCCAGTGGCTACTGCATCTCTCAGAGGAGAGGGGTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: YLTGSGHRSFLGTLV*WPVATASLRGEGCL Trigger: GAGGCACCCCTCTCCTCTGAGAGATGCAGTAGCCACTGGCCAGCACACAAGAGTCCCAAGAAAGGACCTATGCCCGCTGCCAGTGAGGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 90 bp | GGGGGACCCTTTGGTGAAGAGAGGGTGGGAAACACAGGCAGTGTCTaGGCTTACCTCACTGGCAGCGGGCATAGGTCCTTTCTTGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GGPFGEERVGNTGSV*AYLTGSGHRSFLGT Trigger: AGTCCCAAGAAAGGACCTATGCCCGCTGCCAGTGAGGTAAGCCCAGACACTGCCTGTGTTTCCCACCCTCTCTTCACCAAAGGGTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS-3UTR CAA 90 bp | GGCACTAGGAAGGCATGCATTCTGTACTGCACACTGACGTGGGGCCAGTCCCTGACCCACGCCAAAACCTaGTCGATGGCCTCCTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GTRKACILYCTLTWGQSLTHAKT*SMASCS Trigger: ACTGCAGGAGGCCATCGACAAGGTTTTGGCGTGGGT...CAGGGACTGGCCCCACGTCAGTGTGCAGTACAGAATGCATGCCTTCCTAGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 90 bp | TTCACTCGGAACTCCAGCACGGAGGAGTCGGTGGGCACTGGCTTCTaGTCGCAGGGTAGTCTTTTCAGGGAGAACTGGATGTCCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: FTRNSSTEESVGTGF*SQGSLFRENWMSTS Trigger: GGATGTGGACATCCAGTTCTCCCTGAAAAGACTACCCTGCGACCAGAAGCCAGTGCCCACCGACTCCTCCGTGCTGGAGTTCCGAGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 90 bp | AGGTCTGAGGAGGACAGCCGCAGGCCTGTGTCCACATCTGTCTCTTaGGCCCCTTCTAAGTCATCAATGGACATGAGGCGGCTAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSEEDSRRPVSTSVS*APSKSSMDMRRLGF Trigger: GAAGCCTAGCCGCCTCATGTCCATTGATGACTTAGAAGGGGCCCAAGAGACAGATGTGGACACAGGCCTGCGGCTGTCCTCCTCAGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS GCA 90 bp | AAAACAAAGACTTGCTTCTCGGGAAAGACCAGGCAGGGCTGGAGGTaGTCGACTGTGTGTTATACTCCTGCTTGTCCCCAGGGAGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: KTKTCFSGKTRQGWR*STVCYTPACPQGAG Trigger: CCCGGCTCCCTGGGGACAAGCAGGAGTATAACACACAGTCGAGCACCTCCAGCCCTGCCTGGTCTTTCCCGAGAAGCAAGTCTTTGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS GCA 90 bp | GTTCAGTTGGGGAAGGGCCTCCACTGGGCAAACAAAACAAAGACTTaGTTCTCGGGAAAGACCAGGCAGGGCTGGAGGTGCTCGACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VQLGKGLHWANKTKT*FSGKTRQGWRCSTV Trigger: CACAGTCGAGCACCTCCAGCCCTGCCTGGTCTTTCCCGAGAAGCAAGTCTTTGTTTTGTTTGCCCAGTGGAGGCCCTTCCCCAACTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 90 bp | GATTGGAGAAAATGGGGAAGATGCAGAAGTCTGCTTTCCGCTGGCTaGGGCTCCGGCGCAAGATCAGCTCATAGAAGCGGAGGCTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: DWRKWGRCRSLLSAG*GSGARSAHRSGGCQ Trigger: CTGACAGCCTCCGCTTCTATGAGCTGATCTTGCGCCGGAGCCCCAGCCAGCGGAAAGCAGACTTCTGCATCTTCCCCATTTTCTCCAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS-3UTR CAA 90 bp | GGCACTAGGAAGGCATGCATTCTGTACTGCACACTGACGTGGGGCCAGTCCCTGTGCAGAAGGATCTTGTaGCCATCGTGGTCCTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GTRKACILYCTLTWGQSLCRRIL*PSWSSV Trigger: GACTGAGGACCACGATGGCAACAAGATCCTTCTGCA...CAGGGACTGGCCCCACGTCAGTGTGCAGTACAGAATGCATGCCTTCCTAGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS TCA 90 bp | GTAAAACCTACTGGGTGCAGAATATGCAGAGACCACAGACAGGTCTaGGGAGGACAGCCGCAGGCCTGTGTCCACATCTGTCTCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VKPTGCRICRDHRQV*GGQPQACVHICLLG Trigger: GCCCAAGAGACAGATGTGGACACAGGCCTGCGGCTGTCCTCCTCAGACCTGTCTGTGGTCTCTGCATATTCTGCACCCAGTAGGTTTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS TCA 90 bp | GGAGGCAATAGCATGCCTTGGACACCCTGTGTGGCTTTGGGGTCATaGCATGGGGTGTGTGTGGATGACTCTGTGAGCAAGGAGGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GGNSMPWTPCVALGS*HGVCVDDSVSKEAS Trigger: TGATGCCTCCTTGCTCACAGAGTCATCCACACACACCCCATGTCATGACCCCAAAGCCACACAGGGTGTCCAAGGCATGCTATTGCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS-3UTR CAA 90 bp | GCAGGGAACAGAACACGCCCATGCTTTTCTTTCCCACGATTAAACAGAATCTGGGGCCTGGGGGACCCTTaGGTGAAGAGAGGGTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AGNRTRPCFSFPRLNRIWGLGDP*VKRGWE Trigger: TTCCCACCCTCTCTTCACCAAAGGGTCCCCCAGGCC...CCAGATTCTGTTTAATCGTGGGAAAGAAAAGCATGGGCGTGTTCTGTTCCCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS GCA 90 bp | CCATGTCATCAGTCTCAGGACCAACTGTTGTTGGAGGCAATAGCATaGCTTGGACACCCTGTGTGGCTTTGGGGTCATGACATGGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PCHQSQDQLLLEAIA*LGHPVWLWGHDMGC Trigger: ACACCCCATGTCATGACCCCAAAGCCACACAGGGTGTCCAAGGCATGCTATTGCCTCCAACAACAGTTGGTCCTGAGACTGATGACATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 90 bp | GCAAACAAAACAAAGACTTGCTTCTCGGGAAAGACCAGGCAGGGCTaGAGGTGCTCGACTGTGTGTTATACTCCTGCTTGTCCCCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ANKTKTCFSGKTRQG*RCSTVCYTPACPQG Trigger: TCCCTGGGGACAAGCAGGAGTATAACACACAGTCGAGCACCTCCAGCCCTGCCTGGTCTTTCCCGAGAAGCAAGTCTTTGTTTTGTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS GCA 90 bp | CTTGTGTGCTGGCCAGTGGCTACTGCATCTCTCAGAGGAGAGGGGTaGCTCTATTGTGTTGTAAAACCTACTGGGTGCAGAATATGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LVCWPVATASLRGEG*LYCVVKPTGCRICR Trigger: TCTGCATATTCTGCACCCAGTAGGTTTTACAACACAATAGAGGCACCCCTCTCCTCTGAGAGATGCAGTAGCCACTGGCCAGCACACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS-3UTR CAA 90 bp | GTTGTGTGTAGACCCAGATTTTCAAGTGCTGAATGGTTTCAAAGCAAGGCTTTCGTGGCTGTGGTTCAGTaGGGGAAGGGCCTCCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: VVCRPRFSSAEWFQSKAFVAVVQ*GKGLHW Trigger: CCAGTGGAGGCCCTTCCCCAACTGAACCACAGCCAC...GAAAGCCTTGCTTTGAAACCATTCAGCACTTGAAAATCTGGGTCTACACACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 90 bp | ATCTCTCAGAGGAGAGGGGTGCCTCTATTGTGTTGTAAAACCTACTaGGTGCAGAATATGCAGAGACCACAGACAGGTCTGAGGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: ISQRRGVPLLCCKTY*VQNMQRPQTGLRRT Trigger: TGTCCTCCTCAGACCTGTCTGTGGTCTCTGCATATTCTGCACCCAGTAGGTTTTACAACACAATAGAGGCACCCCTCTCCTCTGAGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS-3UTR CAA 90 bp | GCACTGGCTCACATGGACAATCAAAAGGACAGCCAAAAATGTTCCAAGCATTTTTACTTGGGGGCCTTTTaGTGTGTCCTCTGTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ALAHMDNQKDSQKCSKHFYLGAF*CVLCAC Trigger: GCAGGCACAGAGGACACACAAAAAGGCCCCCAAGTA...AAAATGCTTGGAACATTTTTGGCTGTCCTTTTGATTGTCCATGTGAGCCAGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS-3UTR CAA 90 bp | AAGGTAGCTTTCATACTCAGAGTATTTTGTAAGTGTGCAAGGCATTGGGTACTCCCTTTCTTGGGACTCTaGTGTGCTGGCCAGTGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: KVAFILRVFCKCARHWVLPFLGL*CAGQWL Trigger: TAGCCACTGGCCAGCACACAAGAGTCCCAAGAAAGG...GAGTACCCAATGCCTTGCACACTTACAAAATACTCTGAGTATGAAAGCTACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS-3UTR CAA 90 bp | CATTTTAACTGTTTACTGGGCACAGTGCTACAAATTACAAAAGATGGCTCTGGTGCCTGCAGAAGGATCTaGTTGCCATCGTGGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HFNCLLGTVLQITKDGSGACRRI*LPSWSS Trigger: TGAGGACCACGATGGCAACAAGATCCTTCTGCAGGC...ACCAGAGCCATCTTTTGTAATTTGTAGCACTGTGCCCAGTAAACAGTTAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS TCA 72 bp | GGTATGAAGCGGCCATGCACTCGCTCTGTGTGGTGGTaGCGCCAGGGCGGCTGCTGCAGCACCCTGTGTACC | + |
|
Preference number: 6 (lower is better) Translates to: GMKRPCTRSVWW*RQGGCCSTLCT Trigger: GGTACACAGGGTGCTGCAGCAGCCGCCCTGGCGTCACCACCACACAGAGCGAGTGCATGGCCGCTTCATACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 72 bp | CCGGCTGTGCACCCTTGGGAGACTTCCGCCTTCGCCTaGTTGTGCGCCTCTCAGACACTCGGAACAGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PAVHPWETSAFA*LCASQTLGTVG Trigger: TCCCACTGTTCCGAGTGTCTGAGAGGCGCACAACCAGGCGAAGGCGGAAGTCTCCCAAGGGTGCACAGCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS GCA 72 bp | GCGCACGATTTCCTTGCCGTAGTGCACCGGCCTGATTaGCCACAGTGGGGTCCCGGGAGCCAGAGTGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: AHDFLAVVHRPD*PQWGPGSQSEE Trigger: TTCTTCACTCTGGCTCCCGGGACCCCACTGTGGGCAATCAGGCCGGTGCACTACGGCAAGGAAATCGTGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS GCA 72 bp | ATGGGGCTGCAGGGGTTGGGAAGGAGCGGTACCAGTTaGCCGATGTCCTTCACTCGGAACTCCAGCACGGAG | + |
|
Preference number: 6 (lower is better) Translates to: MGLQGLGRSGTS*PMSFTRNSSTE Trigger: CTCCGTGCTGGAGTTCCGAGTGAAGGACATCGGGCAACTGGTACCGCTCCTTCCCAACCCCTGCAGCCCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 72 bp | AAGGGTCCTGTGCCTCCTCCACAGAAAGCTCACTGCTaGTGGAGGACAGGTGGCTGTAGTCGGACCCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: KGPVPPPQKAHC*WRTGGCSRTLR Trigger: CCGGAGGGTCCGACTACAGCCACCTGTCCTCCACCAGCAGTGAGCTTTCTGTGGAGGAGGCACAGGACCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 72 bp | ACTCCTGCTTGTCCCCAGGGAGCCGGGCTATCTGGTTaGATGGGCTGTCATGTAGGGCTGTCTGGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TPACPQGAGLSG*MGCHVGLSGCC Trigger: GCAGCAGCCAGACAGCCCTACATGACAGCCCATCCAACCAGATAGCCCGGCTCCCTGGGGACAAGCAGGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CAA 72 bp | GATGGGGCTGCAGGGGTTGGGAAGGAGCGGTACCAGTaGCCCGATGTCCTTCACTCGGAACTCCAGCACGGA | + |
|
Preference number: 6 (lower is better) Translates to: DGAAGVGKERYQ*PDVLHSELQHG Trigger: TCCGTGCTGGAGTTCCGAGTGAAGGACATCGGGCAACTGGTACCGCTCCTTCCCAACCCCTGCAGCCCCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS GCA 72 bp | GTGCACCCTTGGGAGACTTCCGCCTTCGCCTGGTTGTaGGCCTCTCAGACACTCGGAACAGTGGGAGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: VHPWETSAFAWL*ASQTLGTVGDQ Trigger: CTGATCTCCCACTGTTCCGAGTGTCTGAGAGGCGCACAACCAGGCGAAGGCGGAAGTCTCCCAAGGGTGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 72 bp | GGAGATCAGGGTGAACCCACGCCAAAACCTTGTCGATaGCCTCCTGCAGTGGCTGTGACTCCCCTGGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GDQGEPTPKPCR*PPAVAVTPLGL Trigger: CAGACCCAGGGGAGTCACAGCCACTGCAGGAGGCCATCGACAAGGTTTTGGCGTGGGTTCACCCTGATCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 72 bp | TTCCTTGCCGTAGTGCACCGGCCTGATTGCCCACAGTaGGGTCCCGGGAGCCAGAGTGAAGAAGTCCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: FLAVVHRPDCPQ*GPGSQSEEVLT Trigger: AGTCAGGACTTCTTCACTCTGGCTCCCGGGACCCCACTGTGGGCAATCAGGCCGGTGCACTACGGCAAGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CAA 72 bp | GCTGTGCACCCTTGGGAGACTTCCGCCTTCGCCTGGTaGTGCGCCTCTCAGACACTCGGAACAGTGGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: AVHPWETSAFAW*CASQTLGTVGD Trigger: ATCTCCCACTGTTCCGAGTGTCTGAGAGGCGCACAACCAGGCGAAGGCGGAAGTCTCCCAAGGGTGCACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CAA 72 bp | TACTCCTGCTTGTCCCCAGGGAGCCGGGCTATCTGGTaGGATGGGCTGTCATGTAGGGCTGTCTGGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: YSCLSPGSRAIW*DGLSCRAVWLL Trigger: CAGCAGCCAGACAGCCCTACATGACAGCCCATCCAACCAGATAGCCCGGCTCCCTGGGGACAAGCAGGAGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CAA 72 bp | GGGCTGGAGGTGCTCGACTGTGTGTTATACTCCTGCTaGTCCCCAGGGAGCCGGGCTATCTGGTTGGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: GLEVLDCVLYSC*SPGSRAIWLDG Trigger: CCCATCCAACCAGATAGCCCGGCTCCCTGGGGACAAGCAGGAGTATAACACACAGTCGAGCACCTCCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CAA 90 bp | GACCAGGCAGGGCTGGAGGTGCTCGACTGTGTGTTATACTCCTGCTaGTCCCCAGGGAGCCGGGCTATCTGGTTGGATGGGCTGTCATGT | + |
|
Preference number: 6 (lower is better) Translates to: DQAGLEVLDCVLYSC*SPGSRAIWLDGLSC Trigger: ACATGACAGCCCATCCAACCAGATAGCCCGGCTCCCTGGGGACAAGCAGGAGTATAACACACAGTCGAGCACCTCCAGCCCTGCCTGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS GCA 72 bp | GCAGGGCTGGAGGTGCTCGACTGTGTGTTATACTCCTaGTTGTCCCCAGGGAGCCGGGCTATCTGGTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: AGLEVLDCVLYS*LSPGSRAIWLD Trigger: ATCCAACCAGATAGCCCGGCTCCCTGGGGACAAGCAGGAGTATAACACACAGTCGAGCACCTCCAGCCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 72 bp | TCTGCAGGCCTGGGGGACCCTTTGGTGAAGAGAGGGTaGGAAACACAGGCAGTGTCTGGGCTTACCTCACTG | + |
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Preference number: 6 (lower is better) Translates to: SAGLGDPLVKRG*ETQAVSGLTSL Trigger: CAGTGAGGTAAGCCCAGACACTGCCTGTGTTTCCCACCCTCTCTTCACCAAAGGGTCCCCCAGGCCTGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CAA 90 bp | TGTGTGTTATACTCCTGCTTGTCCCCAGGGAGCCGGGCTATCTGGTaGGATGGGCTGTCATGTAGGGCTGTCTGGCTGCTGCCCTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: CVLYSCLSPGSRAIW*DGLSCRAVWLLPCP Trigger: AGGACAGGGCAGCAGCCAGACAGCCCTACATGACAGCCCATCCAACCAGATAGCCCGGCTCCCTGGGGACAAGCAGGAGTATAACACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CAA 90 bp | ATGAGGCGGCTAGGCTTCCACTCCGATGCACTGTGTCTCTGGGAATaGGTCGGTAGTGGCTGTGGTTCAGTTGGGGAAGGGCCTCCACTG | + |
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Preference number: 6 (lower is better) Translates to: MRRLGFHSDALCLWE*VGSGCGSVGEGPPL Trigger: CAGTGGAGGCCCTTCCCCAACTGAACCACAGCCACTACCGACCAATTCCCAGAGACACAGTGCATCGGAGTGGAAGCCTAGCCGCCTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS GCA 72 bp | GGCAGCGGGCATAGGTCCTTTCTTGGGACTCTTGTGTaGTGGCCAGTGGCTACTGCATCTCTCAGAGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: GSGHRSFLGTLV*WPVATASLRGE Trigger: CTCTCCTCTGAGAGATGCAGTAGCCACTGGCCAGCACACAAGAGTCCCAAGAAAGGACCTATGCCCGCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 72 bp | AACTCCAGCACGGAGGAGTCGGTGGGCACTGGCTTCTaGTCGCAGGGTAGTCTTTTCAGGGAGAACTGGATG | + |
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Preference number: 6 (lower is better) Translates to: NSSTEESVGTGF*SQGSLFRENWM Trigger: CATCCAGTTCTCCCTGAAAAGACTACCCTGCGACCAGAAGCCAGTGCCCACCGACTCCTCCGTGCTGGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 72 bp | GCTATCTGGTTGGATGGGCTGTCATGTAGGGCTGTCTaGCTGCTGCCCTGTCCTGTGTTTGGTGTGTCGACC | + |
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Preference number: 6 (lower is better) Translates to: AIWLDGLSCRAV*LLPCPVFGVST Trigger: GGTCGACACACCAAACACAGGACAGGGCAGCAGCCAGACAGCCCTACATGACAGCCCATCCAACCAGATAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 72 bp | GAGGACAGCCGCAGGCCTGTGTCCACATCTGTCTCTTaGGCCCCTTCTAAGTCATCAATGGACATGAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: EDSRRPVSTSVS*APSKSSMDMRR Trigger: CCGCCTCATGTCCATTGATGACTTAGAAGGGGCCCAAGAGACAGATGTGGACACAGGCCTGCGGCTGTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CAA 90 bp | ATGGGCTGTCATGTAGGGCTGTCTGGCTGCTGCCCTGTCCTGTGTTaGGTGTGTCGACCGCTGCAGGAGGAGCAGAATGTGGTTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: MGCHVGLSGCCPVLC*VCRPLQEEQNVVSS Trigger: AGAAGAAACCACATTCTGCTCCTCCTGCAGCGGTCGACACACCAAACACAGGACAGGGCAGCAGCCAGACAGCCCTACATGACAGCCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CAA 90 bp | GGTTCAGTTGGGGAAGGGCCTCCACTGGGCAAACAAAACAAAGACTaGCTTCTCGGGAAAGACCAGGCAGGGCTGGAGGTGCTCGACTGT | + |
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Preference number: 6 (lower is better) Translates to: GSVGEGPPLGKQNKD*LLGKDQAGLEVLDC Trigger: ACAGTCGAGCACCTCCAGCCCTGCCTGGTCTTTCCCGAGAAGCAAGTCTTTGTTTTGTTTGCCCAGTGGAGGCCCTTCCCCAACTGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS TCA 72 bp | GGCTGTCAGTGTAGCTGTTATGGCGACAGTAGATGGTaGAGCGCACGATTTCCTTGCCGTAGTGCACCGGCC | + |
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Preference number: 6 (lower is better) Translates to: GCQCSCYGDSRW*SARFPCRSAPA Trigger: GGCCGGTGCACTACGGCAAGGAAATCGTGCGCTTCACCATCTACTGTCGCCATAACAGCTACACTGACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 72 bp | AAATGGGGAAGATGCAGAAGTCTGCTTTCCGCTGGCTaGGGCTCCGGCGCAAGATCAGCTCATAGAAGCGGA | + |
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Preference number: 6 (lower is better) Translates to: KWGRCRSLLSAG*GSGARSAHRSG Trigger: TCCGCTTCTATGAGCTGATCTTGCGCCGGAGCCCCAGCCAGCGGAAAGCAGACTTCTGCATCTTCCCCATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CAA 72 bp | TTTTTGTGTGTCCTCTGTGCCTGCAGAAGGATCTTGTaGCCATCGTGGTCCTCAGTCTGCCAGCGCCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: FLCVLCACRRIL*PSWSSVCQRPS Trigger: CGAGGGGCGCTGGCAGACTGAGGACCACGATGGCAACAAGATCCTTCTGCAGGCACAGAGGACACACAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS TCA 72 bp | TGGGGTCATGACATGGGGTGTGTGTGGATGACTCTGTaGGCAAGGAGGCATCAGAAGCTGAGAGAGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: WGHDMGCVWMTL*ARRHQKLREQE Trigger: CTCCTGCTCTCTCAGCTTCTGATGCCTCCTTGCTCACAGAGTCATCCACACACACCCCATGTCATGACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 72 bp | TTTGGTGAAGAGAGGGTGGGAAACACAGGCAGTGTCTaGGCTTACCTCACTGGCAGCGGGCATAGGTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: FGEERVGNTGSV*AYLTGSGHRSF Trigger: AAAGGACCTATGCCCGCTGCCAGTGAGGTAAGCCCAGACACTGCCTGTGTTTCCCACCCTCTCTTCACCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 72 bp | GAGGCAATAGCATGCCTTGGACACCCTGTGTGGCTTTaGGGTCATGACATGGGGTGTGTGTGGATGACTCTG | + |
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Preference number: 6 (lower is better) Translates to: EAIACLGHPVWL*GHDMGCVWMTL Trigger: CAGAGTCATCCACACACACCCCATGTCATGACCCCAAAGCCACACAGGGTGTCCAAGGCATGCTATTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS GCA 72 bp | CTTTCTTGGGACTCTTGTGTGCTGGCCAGTGGCTACTaGATCTCTCAGAGGAGAGGGGTGCCTCTATTGTGT | + |
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Preference number: 6 (lower is better) Translates to: LSWDSCVLASGY*ISQRRGVPLLC Trigger: ACACAATAGAGGCACCCCTCTCCTCTGAGAGATGCAGTAGCCACTGGCCAGCACACAAGAGTCCCAAGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CAA 72 bp | GTCTCTGGGAATTGGTCGGTAGTGGCTGTGGTTCAGTaGGGGAAGGGCCTCCACTGGGCAAACAAAACAAAG | + |
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Preference number: 6 (lower is better) Translates to: VSGNWSVVAVVQ*GKGLHWANKTK Trigger: CTTTGTTTTGTTTGCCCAGTGGAGGCCCTTCCCCAACTGAACCACAGCCACTACCGACCAATTCCCAGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS GCA 72 bp | TGGCCAGTGGCTACTGCATCTCTCAGAGGAGAGGGGTaGCTCTATTGTGTTGTAAAACCTACTGGGTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: WPVATASLRGEG*LYCVVKPTGCR Trigger: TCTGCACCCAGTAGGTTTTACAACACAATAGAGGCACCCCTCTCCTCTGAGAGATGCAGTAGCCACTGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 72 bp | GGGAGAACTGGATGTCCACATCCAGATTGGAGAAAATaGGGAAGATGCAGAAGTCTGCTTTCCGCTGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GRTGCPHPDWRK*GRCRSLLSAGW Trigger: CCAGCCAGCGGAAAGCAGACTTCTGCATCTTCCCCATTTTCTCCAATCTGGATGTGGACATCCAGTTCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 72 bp | GTTTGGTGTGTCGACCGCTGCAGGAGGAGCAGAATGTaGTTTCTTCTCAGAGGAGTGATGTGCTCTGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: VWCVDRCRRSRM*FLLRGVMCSAV Trigger: TACAGCAGAGCACATCACTCCTCTGAGAAGAAACCACATTCTGCTCCTCCTGCAGCGGTCGACACACCAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 72 bp | ACAAAGACTTGCTTCTCGGGAAAGACCAGGCAGGGCTaGAGGTGCTCGACTGTGTGTTATACTCCTGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: TKTCFSGKTRQG*RCSTVCYTPAC Trigger: ACAAGCAGGAGTATAACACACAGTCGAGCACCTCCAGCCCTGCCTGGTCTTTCCCGAGAAGCAAGTCTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CAA 72 bp | ACTCCTCCATGTCATCAGTCTCAGGACCAACTGTTGTaGGAGGCAATAGCATGCCTTGGACACCCTGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: TPPCHQSQDQLL*EAIACLGHPVW Trigger: CCACACAGGGTGTCCAAGGCATGCTATTGCCTCCAACAACAGTTGGTCCTGAGACTGATGACATGGAGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CAA 90 bp | ATGCACTGTGTCTCTGGGAATTGGTCGGTAGTGGCTGTGGTTCAGTaGGGGAAGGGCCTCCACTGGGCAAACAAAACAAAGACTTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: MHCVSGNWSVVAVVQ*GKGLHWANKTKTCF Trigger: GAAGCAAGTCTTTGTTTTGTTTGCCCAGTGGAGGCCCTTCCCCAACTGAACCACAGCCACTACCGACCAATTCCCAGAGACACAGTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CAA 90 bp | CTGGCCAGTGGCTACTGCATCTCTCAGAGGAGAGGGGTGCCTCTATaGTGTTGTAAAACCTACTGGGTGCAGAATATGCAGAGACCACAG | + |
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Preference number: 6 (lower is better) Translates to: LASGYCISQRRGVPL*CCKTYWVQNMQRPQ Trigger: CTGTGGTCTCTGCATATTCTGCACCCAGTAGGTTTTACAACACAATAGAGGCACCCCTCTCCTCTGAGAGATGCAGTAGCCACTGGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CAA 90 bp | AGATGTAGAACTCCTCCATGTCATCAGTCTCAGGACCAACTGTTGTaGGAGGCAATAGCATGCCTTGGACACCCTGTGTGGCTTTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: RCRTPPCHQSQDQLL*EAIACLGHPVWLWG Trigger: ACCCCAAAGCCACACAGGGTGTCCAAGGCATGCTATTGCCTCCAACAACAGTTGGTCCTGAGACTGATGACATGGAGGAGTTCTACATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS TCA 72 bp | GCAGGAGGAGCAGAATGTGGTTTCTTCTCAGAGGAGTaGTGTGCTCTGCTGTACTTGGGGGCCTTTTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: AGGAECGFFSEE*CALLYLGAFLC Trigger: ACACAAAAAGGCCCCCAAGTACAGCAGAGCACATCACTCCTCTGAGAAGAAACCACATTCTGCTCCTCCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CCA 72 bp | GTTTCTTCTCAGAGGAGTGATGTGCTCTGCTGTACTTaGGGGCCTTTTTGTGTGTCCTCTGTGCCTGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: VSSQRSDVLCCT*GPFCVSSVPAE Trigger: TTCTGCAGGCACAGAGGACACACAAAAAGGCCCCCAAGTACAGCAGAGCACATCACTCCTCTGAGAAGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS GCA 72 bp | CAGAATGTGGTTTCTTCTCAGAGGAGTGATGTGCTCTaGTGTACTTGGGGGCCTTTTTGTGTGTCCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: QNVVSSQRSDVL*CTWGPFCVSSV Trigger: CACAGAGGACACACAAAAAGGCCCCCAAGTACAGCAGAGCACATCACTCCTCTGAGAAGAAACCACATTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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| CDS CAA 72 bp | GGCTACTGCATCTCTCAGAGGAGAGGGGTGCCTCTATaGTGTTGTAAAACCTACTGGGTGCAGAATATGCAG | + |
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Preference number: 6 (lower is better) Translates to: GYCISQRRGVPL*CCKTYWVQNMQ Trigger: CTGCATATTCTGCACCCAGTAGGTTTTACAACACAATAGAGGCACCCCTCTCCTCTGAGAGATGCAGTAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039064.8 |
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