Pregenerated sensors for FAM122C (Mus musculus)

Ensembl gene IDs: ENSMUSG00000036013

Ensembl transcript IDs: ENSMUST00000114835.8, ENSMUST00000124137.8, ENSMUST00000186314.2

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TTGGCAGATGTACGACTGCGGGAAGGTAGAAACAGCAATCCATGCTaGTTCAGAAAGGGGGAGCCGTTCCTTCTCATTCTTGTGGGGCCA	+
Preference number: 5 (lower is better) Translates to: LADVRLREGRNSNPC*FRKGEPFLLILVGP Trigger: TGGCCCCACAAGAATGAGAAGGAACGGCTCCCCCTTTCTGAATCAGCATGGATTGCTGTTTCTACCTTCCCGCAGTCGTACATCTGCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114835.8 ENSMUST00000124137.8 ENSMUST00000186314.2
CDS CCA 90 bp	TTCAGAAAGGGGGAGCCGTTCCTTCTCATTCTTGTGGGGCCAACTTaGAATCCCTGTGAATTATCACCAAATCCATTGACCGAAGGGATG	+
Preference number: 5 (lower is better) Translates to: FRKGEPFLLILVGPT*NPCELSPNPLTEGM Trigger: CATCCCTTCGGTCAATGGATTTGGTGATAATTCACAGGGATTCCAAGTTGGCCCCACAAGAATGAGAAGGAACGGCTCCCCCTTTCTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114835.8 ENSMUST00000124137.8 ENSMUST00000186314.2
CDS GCA 90 bp	AGATTTAGACATTGTTCCGTACTCCGACTTATCTGCATTGCAGTATaGATGTCCCTCTCATGCATTGCTTCTCTAATTGCCATATCCATC	+
Preference number: 5 (lower is better) Translates to: RFRHCSVLRLICIAV*MSLSCIASLIAISI Trigger: GATGGATATGGCAATTAGAGAAGCAATGCATGAGAGGGACATGCATACTGCAATGCAGATAAGTCGGAGTACGGAACAATGTCTAAATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114835.8 ENSMUST00000124137.8 ENSMUST00000186314.2
CDS TCA 72 bp	GTACGACTGCGGGAAGGTAGAAACAGCAATCCATGCTaGTTCAGAAAGGGGGAGCCGTTCCTTCTCATTCTT	+
Preference number: 6 (lower is better) Translates to: VRLREGRNSNPC*FRKGEPFLLIL Trigger: AAGAATGAGAAGGAACGGCTCCCCCTTTCTGAATCAGCATGGATTGCTGTTTCTACCTTCCCGCAGTCGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114835.8 ENSMUST00000124137.8 ENSMUST00000186314.2
CDS CCA 72 bp	GGGGAGCCGTTCCTTCTCATTCTTGTGGGGCCAACTTaGAATCCCTGTGAATTATCACCAAATCCATTGACC	+
Preference number: 6 (lower is better) Translates to: GEPFLLILVGPT*NPCELSPNPLT Trigger: GGTCAATGGATTTGGTGATAATTCACAGGGATTCCAAGTTGGCCCCACAAGAATGAGAAGGAACGGCTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114835.8 ENSMUST00000124137.8 ENSMUST00000186314.2
CDS CAA 72 bp	GCTGATTCAGAAAGGGGGAGCCGTTCCTTCTCATTCTaGTGGGGCCAACTTGGAATCCCTGTGAATTATCAC	+
Preference number: 6 (lower is better) Translates to: ADSERGSRSFSF*WGQLGIPVNYH Trigger: GTGATAATTCACAGGGATTCCAAGTTGGCCCCACAAGAATGAGAAGGAACGGCTCCCCCTTTCTGAATCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114835.8 ENSMUST00000124137.8 ENSMUST00000186314.2
CDS CCA 72 bp	GATTCAGAAAGGGGGAGCCGTTCCTTCTCATTCTTGTaGGGCCAACTTGGAATCCCTGTGAATTATCACCAA	+
Preference number: 6 (lower is better) Translates to: DSERGSRSFSFL*GQLGIPVNYHQ Trigger: TTGGTGATAATTCACAGGGATTCCAAGTTGGCCCCACAAGAATGAGAAGGAACGGCTCCCCCTTTCTGAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114835.8 ENSMUST00000124137.8 ENSMUST00000186314.2
CDS CAA 72 bp	TCCATCCCTTCTTCCTGTTTGATTTGGAAAATCCGGTaGGCAGATGTACGACTGCGGGAAGGTAGAAACAGC	+
Preference number: 6 (lower is better) Translates to: SIPSSCLIWKIR*ADVRLREGRNS Trigger: GCTGTTTCTACCTTCCCGCAGTCGTACATCTGCCAACCGGATTTTCCAAATCAAACAGGAAGAAGGGATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114835.8 ENSMUST00000124137.8 ENSMUST00000186314.2
CDS CAA 90 bp	GCAATCCATGCTGATTCAGAAAGGGGGAGCCGTTCCTTCTCATTCTaGTGGGGCCAACTTGGAATCCCTGTGAATTATCACCAAATCCAT	+
Preference number: 6 (lower is better) Translates to: AIHADSERGSRSFSF*WGQLGIPVNYHQIH Trigger: ATGGATTTGGTGATAATTCACAGGGATTCCAAGTTGGCCCCACAAGAATGAGAAGGAACGGCTCCCCCTTTCTGAATCAGCATGGATTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114835.8 ENSMUST00000124137.8 ENSMUST00000186314.2
CDS GCA 72 bp	CATTGTTCCGTACTCCGACTTATCTGCATTGCAGTATaGATGTCCCTCTCATGCATTGCTTCTCTAATTGCC	+
Preference number: 6 (lower is better) Translates to: HCSVLRLICIAV*MSLSCIASLIA Trigger: GGCAATTAGAGAAGCAATGCATGAGAGGGACATGCATACTGCAATGCAGATAAGTCGGAGTACGGAACAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114835.8 ENSMUST00000124137.8 ENSMUST00000186314.2
CDS CAA 72 bp	TCTAATTGCCATATCCATCCCTTCTTCCTGTTTGATTaGGAAAATCCGGTTGGCAGATGTACGACTGCGGGA	+
Preference number: 6 (lower is better) Translates to: SNCHIHPFFLFD*ENPVGRCTTAG Trigger: TCCCGCAGTCGTACATCTGCCAACCGGATTTTCCAAATCAAACAGGAAGAAGGGATGGATATGGCAATTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114835.8 ENSMUST00000124137.8 ENSMUST00000186314.2
CDS GCA 72 bp	TATCTGCATTGCAGTATGCATGTCCCTCTCATGCATTaGTTCTCTAATTGCCATATCCATCCCTTCTTCCTG	+
Preference number: 6 (lower is better) Translates to: YLHCSMHVPLMH*FSNCHIHPFFL Trigger: CAGGAAGAAGGGATGGATATGGCAATTAGAGAAGCAATGCATGAGAGGGACATGCATACTGCAATGCAGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114835.8 ENSMUST00000124137.8 ENSMUST00000186314.2
CDS CAA 72 bp	GCTTCTCTAATTGCCATATCCATCCCTTCTTCCTGTTaGATTTGGAAAATCCGGTTGGCAGATGTACGACTG	+
Preference number: 6 (lower is better) Translates to: ASLIAISIPSSC*IWKIRLADVRL Trigger: CAGTCGTACATCTGCCAACCGGATTTTCCAAATCAAACAGGAAGAAGGGATGGATATGGCAATTAGAGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114835.8 ENSMUST00000124137.8 ENSMUST00000186314.2
CDS CAA 72 bp	GATTTAGACATTGTTCCGTACTCCGACTTATCTGCATaGCAGTATGCATGTCCCTCTCATGCATTGCTTCTC	+
Preference number: 6 (lower is better) Translates to: DLDIVPYSDLSA*QYACPSHALLL Trigger: GAGAAGCAATGCATGAGAGGGACATGCATACTGCAATGCAGATAAGTCGGAGTACGGAACAATGTCTAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114835.8 ENSMUST00000124137.8 ENSMUST00000186314.2

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