Pregenerated sensors for FAM122B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036022Ensembl transcript IDs: ENSMUST00000071023.12, ENSMUST00000114838.8, ENSMUST00000114841.2
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGAAAAAGACAAGAATGTGATAAGGGAATCTGTAAGAAGAAGTGGTaGCTGATGGTTGGGACAGAGATGCAGGAGGGTAGGGGGCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: RKRQECDKGICKKKW*LMVGTEMQEGRGQE Trigger: CTCTTGCCCCCTACCCTCCTGCATCTCTGTCCCAACCATCAGTCACCACTTCTTCTTACAGATTCCCTTATCACATTCTTGTCTTTTTCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| 3UTR TCA 90 bp | AAAGACAAGAATGTGATAAGGGAATCTGTAAGAAGAAGTGGTGACTaGTGGTTGGGACAGAGATGCAGGAGGGTAGGGGGCAAGAGTAAT | + |
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Preference number: 1 (lower is better) Translates to: KDKNVIRESVRRSGD*WLGQRCRRVGGKSN Trigger: ATTACTCTTGCCCCCTACCCTCCTGCATCTCTGTCCCAACCATCAGTCACCACTTCTTCTTACAGATTCCCTTATCACATTCTTGTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| 3UTR GCA 90 bp | AGAGAGATGCCCAGAAATAGGAGCATCATCGGAATGGTTGCAATCTaGCAAACTTTAATCCCCATTGTGGATCAAAGTTCTCCGCATTCC | + |
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Preference number: 1 (lower is better) Translates to: REMPRNRSIIGMVAI*QTLIPIVDQSSPHS Trigger: GGAATGCGGAGAACTTTGATCCACAATGGGGATTAAAGTTTGGCAGATTGCAACCATTCCGATGATGCTCCTATTTCTGGGCATCTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR CCA 90 bp | TCAAACAGTAAAGGGAATCCTGCCTCTTTGATCTCATCATACCATTaGGACAGTTTCAGTTTTCTGCTCTGGTTTTACCTTACCATTGAG | + |
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Preference number: 1 (lower is better) Translates to: SNSKGNPASLISSYH*DSFSFLLWFYLTIE Trigger: CTCAATGGTAAGGTAAAACCAGAGCAGAAAACTGAAACTGTCCCAATGGTATGATGAGATCAAAGAGGCAGGATTCCCTTTACTGTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| 3UTR TCA 90 bp | GAGGCACTAGGGAAAAAGTCCTCCAAGCAATCAGAAATGTGTATTTaGGATTTAGTCATCAAACGCAAAATGAGATCAGCCCAAACAGAT | + |
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Preference number: 1 (lower is better) Translates to: EALGKKSSKQSEMCI*DLVIKRKMRSAQTD Trigger: ATCTGTTTGGGCTGATCTCATTTTGCGTTTGATGACTAAATCTCAAATACACATTTCTGATTGCTTGGAGGACTTTTTCCCTAGTGCCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR TCA 90 bp | GTAAACTTAAGACCTGATTCTATAATGGAACTGCAGCAAGCTAAGTaGTGGTCTCTGATAATTAGAAGAGAGGTTTTGCTTCAAGCTCAC | + |
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Preference number: 1 (lower is better) Translates to: VNLRPDSIMELQQAK*WSLIIRREVLLQAH Trigger: GTGAGCTTGAAGCAAAACCTCTCTTCTAATTATCAGAGACCATCACTTAGCTTGCTGCAGTTCCATTATAGAATCAGGTCTTAAGTTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| 3UTR GCA 90 bp | CTCATAATACTACCCAAGACACTGACAGCTTCATGGACGCTTGCTTaGTTTTGTACAGTGGTTTGTGTAAATAACTATTCGTTCATTTGT | + |
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Preference number: 1 (lower is better) Translates to: LIILPKTLTASWTLA*FCTVVCVNNYSFIC Trigger: ACAAATGAACGAATAGTTATTTACACAAACCACTGTACAAAAGCAAGCAAGCGTCCATGAAGCTGTCAGTGTCTTGGGTAGTATTATGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR CCA 90 bp | ATCATTACGAAGGCAAGAGCCTTTGAATACGGTTCATTAACAGAGTaGATACACCGAGTGCTATCAAAGAATTGTTTCTTTAAAATAGCA | + |
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Preference number: 1 (lower is better) Translates to: IITKARAFEYGSLTE*IHRVLSKNCFFKIA Trigger: TGCTATTTTAAAGAAACAATTCTTTGATAGCACTCGGTGTATCCACTCTGTTAATGAACCGTATTCAAAGGCTCTTGCCTTCGTAATGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGGGCAACAAGGACAAGAAGAGGGTTCTGACTCTAGCACAGCACAAAAACCACCTAAGACCCTGAGGTaGCTAATGCAGGCATCCTGT | + |
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Preference number: 2 (lower is better) Translates to: IGQQGQEEGSDSSTAQKPPKTLR*LMQASC Trigger: ACAGGATGCCTGCATTAGTCACCTCAGGGTCTTAGG...TGGTTTTTGTGCTGTGCTAGAGTCAGAACCCTCTTCTTGTCCTTGTTGCCCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGGGCAACAAGGACAAGAAGAGGGTTCTGACTCTAGCACAGCACAAAAACCACACCCGGTCACCACATaGCAGAACAAACTCAAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: IGQQGQEEGSDSSTAQKPHPVTT*QNKLKD Trigger: GTCCTTGAGTTTGTTCTGTCATGTGGTGACCGGGTG...TGGTTTTTGTGCTGTGCTAGAGTCAGAACCCTCTTCTTGTCCTTGTTGCCCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTTAGAGCTCAAAACACTTCTGGAAGCAGAGGGCACAGCAGTACTGACCTTTGGAGCATCATCGGAATaGTTGCAATCTGCCAAACTT | + |
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Preference number: 2 (lower is better) Translates to: CLELKTLLEAEGTAVLTFGASSE*LQSAKL Trigger: AAGTTTGGCAGATTGCAACCATTCCGATGATGCTCC...AAAGGTCAGTACTGCTGTGCCCTCTGCTTCCAGAAGTGTTTTGAGCTCTAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR-3UTR TCA 90 bp | ACTATTCGTTCATTTGTAGATGCTCCACACATCTGGTCAAGGCAGGAATTTCTTGTTTCTTCCCCTTGGTaGGAAATGGCAAGGAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: TIRSFVDAPHIWSRQEFLVSSPW*EMARSR Trigger: CCTGCTCCTTGCCATTTCTCACCAAGGGGAAGAAAC...AAGAAATTCCTGCCTTGACCAGATGTGTGGAGCATCTACAAATGAACGAATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR-3UTR TCA 90 bp | AATCCTGCCTCTTTGATCTCATCATACCATTGGGACAGTTTCAGTTTTCTGCTCTACTACCCAAGACACTaGCAGCTTCATGGACGCTTG | + |
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Preference number: 2 (lower is better) Translates to: NPASLISSYHWDSFSFLLYYPRH*QLHGRL Trigger: CAAGCGTCCATGAAGCTGTCAGTGTCTTGGGTAGTA...GAGCAGAAAACTGAAACTGTCCCAATGGTATGATGAGATCAAAGAGGCAGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGGGCAACAAGGACAAGAAGAGGGTTCTGACTCTAGCACAGCACAAAAACCAAGCTTCATGGACGCTTaGTTGCTTTTGTACAGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: IGQQGQEEGSDSSTAQKPSFMDA*LLLYSG Trigger: ACCACTGTACAAAAGCAAGCAAGCGTCCATGAAGCT...TGGTTTTTGTGCTGTGCTAGAGTCAGAACCCTCTTCTTGTCCTTGTTGCCCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAGCTTTTCACAGGCTAAAGAAACATGGGAACTCAGGCCAGTAATAGCTTTTCCCCTTGGTGAGAAATaGCAAGGAGCAGGTCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: RSFSQAKETWELRPVIAFPLGEK*QGAGQT Trigger: TGTTTGACCTGCTCCTTGCCATTTCTCACCAAGGGG...AAAAGCTATTACTGGCCTGAGTTCCCATGTTTCTTTAGCCTGTGAAAAGCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGTTGAACATTAAAAGAAACCTAACCGCACAGACATCGCACTATTACACCAGCTCAAAACACTTCTaGAAGCAGAGGGCACAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: TRLNIKRNLTAQTSHYYTSSKHF*KQRAQQ Trigger: CTGCTGTGCCCTCTGCTTCCAGAAGTGTTTTGAGCT...GGTGTAATAGTGCGATGTCTGTGCGGTTAGGTTTCTTTTAATGTTCAACCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCACATTTATGTTAGGTTTGGAGGATTAGGAGCTTTTCACAGGCTAAAGAAACCTAAGACCCTGAGGTaGCTAATGCAGGCATCCTGT | + |
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Preference number: 2 (lower is better) Translates to: QHIYVRFGGLGAFHRLKKPKTLR*LMQASC Trigger: ACAGGATGCCTGCATTAGTCACCTCAGGGTCTTAGG...TTTCTTTAGCCTGTGAAAAGCTCCTAATCCTCCAAACCTAACATAAATGTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGAGCTCAAAACACTTCTGGAAGCAGAGGGCACAGCAGTACTGACCTTTTTAGGAGCATCATCGGAATaGTTGCAATCTGCCAAACTT | + |
|
Preference number: 2 (lower is better) Translates to: LELKTLLEAEGTAVLTFLGASSE*LQSAKL Trigger: AAGTTTGGCAGATTGCAACCATTCCGATGATGCTCC...TAAAAAGGTCAGTACTGCTGTGCCCTCTGCTTCCAGAAGTGTTTTGAGCTCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR-3UTR CCA 90 bp | CAACAAGGACAAGAAGAGGGTTCTGACTCTAGCACAGCACAAAAACCAACAACAGATGCTCCACACATCTaGTCAAGGCAGGAATTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: QQGQEEGSDSSTAQKPTTDAPHI*SRQEFL Trigger: AAGAAATTCCTGCCTTGACCAGATGTGTGGAGCATC...TGTTGTTGGTTTTTGTGCTGTGCTAGAGTCAGAACCCTCTTCTTGTCCTTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTCTTTGATCTCATCATACCATTGGGACAGTTTCAGTTTTCTGCTCTGGTTTAAGCAAGAATGGTGGTaGTGGAAGCAACTATGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: ASLISSYHWDSFSFLLWFKQEWW*WKQLWV Trigger: AACCCATAGTTGCTTCCATCACCACCATTCTTGCTT...AAACCAGAGCAGAAAACTGAAACTGTCCCAATGGTATGATGAGATCAAAGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTATGTTAGGTTTGGAGGATTAGGAGCTTTTCACAGGCTAAAGAAACATGGGTACTACCCAAGACACTaGCAGCTTCATGGACGCTTG | + |
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Preference number: 2 (lower is better) Translates to: IYVRFGGLGAFHRLKKHGYYPRH*QLHGRL Trigger: CAAGCGTCCATGAAGCTGTCAGTGTCTTGGGTAGTA...CCCATGTTTCTTTAGCCTGTGAAAAGCTCCTAATCCTCCAAACCTAACATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGGGCAACAAGGACAAGAAGAGGGTTCTGACTCTAGCACAGCACAAAAACCAAACTTTAGAGAGAGATaGCCAGAAATAGGAGCATCA | + |
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Preference number: 2 (lower is better) Translates to: IGQQGQEEGSDSSTAQKPNFRER*PEIGAS Trigger: TGATGCTCCTATTTCTGGGCATCTCTCTCTAAAGTT...TGGTTTTTGTGCTGTGCTAGAGTCAGAACCCTCTTCTTGTCCTTGTTGCCCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTATGTTAGGTTTGGAGGATTAGGAGCTTTTCACAGGCTAAAGAAACATGGGCCCCTTGGTGAGAAATaGCAAGGAGCAGGTCAAACA | + |
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Preference number: 2 (lower is better) Translates to: IYVRFGGLGAFHRLKKHGPLGEK*QGAGQT Trigger: TGTTTGACCTGCTCCTTGCCATTTCTCACCAAGGGG...CCCATGTTTCTTTAGCCTGTGAAAAGCTCCTAATCCTCCAAACCTAACATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGTCTCAAACAGTAAAGGGAATCCTGCCTCTTTGATCTCATCATACCATTGGACACTGACAGCTTCATaGACGCTTGCTTGCTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: LVSNSKGNPASLISSYHWTLTAS*TLACFC Trigger: ACAAAAGCAAGCAAGCGTCCATGAAGCTGTCAGTGT...CCAATGGTATGATGAGATCAAAGAGGCAGGATTCCCTTTACTGTTTGAGACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| 3UTR CAA 90 bp | AGATCAGCCCAAACAGATGTTAGTAAGGTGACTCTGCTTGCAAAATaGAACTTTAGAGAGAGATGCCCAGAAATAGGAGCATCATCGGAA | + |
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Preference number: 2 (lower is better) Translates to: RSAQTDVSKVTLLAK*NFRERCPEIGASSE Trigger: TTCCGATGATGCTCCTATTTCTGGGCATCTCTCTCTAAAGTTCAATTTTGCAAGCAGAGTCACCTTACTAACATCTGTTTGGGCTGATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTCTTTGATCTCATCATACCATTGGGACAGTTTCAGTTTTCTGCTCTGGTTTCTCTGCTTGCAAAATTaGACTTTAGAGAGAGATGCC | + |
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Preference number: 2 (lower is better) Translates to: ASLISSYHWDSFSFLLWFLCLQN*TLERDA Trigger: GGCATCTCTCTCTAAAGTTCAATTTTGCAAGCAGAG...AAACCAGAGCAGAAAACTGAAACTGTCCCAATGGTATGATGAGATCAAAGAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGGGCAACAAGGACAAGAAGAGGGTTCTGACTCTAGCACAGCACAAAAACCAAAGCAAGAGAATTTCTaGTTAACTCTGTTTTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: IGQQGQEEGSDSSTAQKPKQENF*LTLFCH Trigger: GTGGCAAAACAGAGTTAATCAGAAATTCTCTTGCTT...TGGTTTTTGTGCTGTGCTAGAGTCAGAACCCTCTTCTTGTCCTTGTTGCCCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGTCTCAAACAGTAAAGGGAATCCTGCCTCTTTGATCTCATCATACCATTGGAATAAGACAGAAGAGTaGAGGCAGACAAATCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LVSNSKGNPASLISSYHWNKTEE*RQTNLL Trigger: CAGGAGATTTGTCTGCCTTCACTCTTCTGTCTTATT...CCAATGGTATGATGAGATCAAAGAGGCAGGATTCCCTTTACTGTTTGAGACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| 3UTR-3UTR GCA 90 bp | CAACAAGGACAAGAAGAGGGTTCTGACTCTAGCACAGCACAAAAACCAACAACAGGAATGGTTGCAATCTaGCAAACTTTAATCCCCATT | + |
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Preference number: 2 (lower is better) Translates to: QQGQEEGSDSSTAQKPTTGMVAI*QTLIPI Trigger: AATGGGGATTAAAGTTTGGCAGATTGCAACCATTCC...TGTTGTTGGTTTTTGTGCTGTGCTAGAGTCAGAACCCTCTTCTTGTCCTTGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR-3UTR TCA 90 bp | ACATCTGGTCAAGGCAGGAATTTCTTCTCCTTGATAACACCACCTAGAAATATCCTCTGCTTGCAAAATTaGACTTTAGAGAGAGATGCC | + |
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Preference number: 2 (lower is better) Translates to: TSGQGRNFFSLITPPRNILCLQN*TLERDA Trigger: GGCATCTCTCTCTAAAGTTCAATTTTGCAAGCAGAG...GATATTTCTAGGTGGTGTTATCAAGGAGAAGAAATTCCTGCCTTGACCAGATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGTCTCAAACAGTAAAGGGAATCCTGCCTCTTTGATCTCATCATACCATTGGGGAATGGTTGCAATCTaGCAAACTTTAATCCCCATT | + |
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Preference number: 2 (lower is better) Translates to: LVSNSKGNPASLISSYHWGMVAI*QTLIPI Trigger: AATGGGGATTAAAGTTTGGCAGATTGCAACCATTCC...CCAATGGTATGATGAGATCAAAGAGGCAGGATTCCCTTTACTGTTTGAGACCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR-3UTR GCA 90 bp | ATTTATGTTAGGTTTGGAGGATTAGGAGCTTTTCACAGGCTAAAGAAACATGGGAACTTTAGAGAGAGATaGCCAGAAATAGGAGCATCA | + |
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Preference number: 2 (lower is better) Translates to: IYVRFGGLGAFHRLKKHGNFRER*PEIGAS Trigger: TGATGCTCCTATTTCTGGGCATCTCTCTCTAAAGTT...CCCATGTTTCTTTAGCCTGTGAAAAGCTCCTAATCCTCCAAACCTAACATAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR TCA 72 bp | AATGTGATAAGGGAATCTGTAAGAAGAAGTGGTGACTaGTGGTTGGGACAGAGATGCAGGAGGGTAGGGGGC | + |
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Preference number: 3 (lower is better) Translates to: NVIRESVRRSGD*WLGQRCRRVGG Trigger: GCCCCCTACCCTCCTGCATCTCTGTCCCAACCATCAGTCACCACTTCTTCTTACAGATTCCCTTATCACATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| 3UTR TCA 72 bp | GCACAGCACAAAAACCAACAACACCCGGTCACCACATaGCAGAACAAACTCAAGGACAACAGGGAATCAGGA | + |
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Preference number: 3 (lower is better) Translates to: AQHKNQQHPVTT*QNKLKDNRESG Trigger: TCCTGATTCCCTGTTGTCCTTGAGTTTGTTCTGTCATGTGGTGACCGGGTGTTGTTGGTTTTTGTGCTGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| 3UTR-3UTR CAA 90 bp | AATCCTGCCTCTTTGATCTCATCATACCATTGGGACAGTTTCAGTTTTCTGCTCATGGGTTTCTTCCCCTaGGTGAGAAATGGCAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: NPASLISSYHWDSFSFLLMGFFP*VRNGKE Trigger: CTCCTTGCCATTTCTCACCAAGGGGAAGAAACCCAT...GAGCAGAAAACTGAAACTGTCCCAATGGTATGATGAGATCAAAGAGGCAGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR-3UTR CAA 90 bp | ATAGGGCAACAAGGACAAGAAGAGGGTTCTGACTCTAGCACAGCACAAAAACCACTTAAGGCACCAGGTTaGGGGAGAAAAATAGCAACT | + |
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Preference number: 3 (lower is better) Translates to: IGQQGQEEGSDSSTAQKPLKAPG*GRKIAT Trigger: AGTTGCTATTTTTCTCCCCAAACCTGGTGCCTTAAG...TGGTTTTTGTGCTGTGCTAGAGTCAGAACCCTCTTCTTGTCCTTGTTGCCCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR TCA 72 bp | AATGCTCCCCTTAAATGTTTGAAAGTAGGTGCTCTTTaGGGCACTAGGGAAAAAGTCCTCCAAGCAATCAGA | + |
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Preference number: 3 (lower is better) Translates to: NAPLKCLKVGAL*GTREKVLQAIR Trigger: TCTGATTGCTTGGAGGACTTTTTCCCTAGTGCCTCAAAGAGCACCTACTTTCAAACATTTAAGGGGAGCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR GCA 72 bp | CCCAGAAATAGGAGCATCATCGGAATGGTTGCAATCTaGCAAACTTTAATCCCCATTGTGGATCAAAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: PRNRSIIGMVAI*QTLIPIVDQSS Trigger: AGAACTTTGATCCACAATGGGGATTAAAGTTTGGCAGATTGCAACCATTCCGATGATGCTCCTATTTCTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR GCA 72 bp | GTGACTCTGCTTGCAAAATTGAACTTTAGAGAGAGATaGCCAGAAATAGGAGCATCATCGGAATGGTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: VTLLAKLNFRER*PEIGASSEWLQ Trigger: TTGCAACCATTCCGATGATGCTCCTATTTCTGGGCATCTCTCTCTAAAGTTCAATTTTGCAAGCAGAGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR-3UTR CAA 90 bp | ATAGGGCAACAAGGACAAGAAGAGGGTTCTGACTCTAGCACAGCACAAAAACCAAGGAATTTCTTCTCCTaGATAACACCACCTAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: IGQQGQEEGSDSSTAQKPRNFFS*ITPPRN Trigger: ATTTCTAGGTGGTGTTATCAAGGAGAAGAAATTCCT...TGGTTTTTGTGCTGTGCTAGAGTCAGAACCCTCTTCTTGTCCTTGTTGCCCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR TCA 72 bp | AGTTGGTCTCAAACAGTAAAGGGAATCCTGCCTCTTTaGTCTCATCATACCATTGGGACAGTTTCAGTTTTC | + |
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Preference number: 3 (lower is better) Translates to: SWSQTVKGILPL*SHHTIGTVSVF Trigger: GAAAACTGAAACTGTCCCAATGGTATGATGAGATCAAAGAGGCAGGATTCCCTTTACTGTTTGAGACCAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| 3UTR CCA 72 bp | AAAGGGAATCCTGCCTCTTTGATCTCATCATACCATTaGGACAGTTTCAGTTTTCTGCTCTGGTTTTACCTT | + |
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Preference number: 3 (lower is better) Translates to: KGNPASLISSYH*DSFSFLLWFYL Trigger: AAGGTAAAACCAGAGCAGAAAACTGAAACTGTCCCAATGGTATGATGAGATCAAAGAGGCAGGATTCCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| 3UTR-3UTR CAA 90 bp | ACCAGGTTGAACATTAAAAGAAACCTAACCGCACAGACATCGCACTATTACACCACTCTGCTTGCAAAATaGAACTTTAGAGAGAGATGC | + |
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Preference number: 3 (lower is better) Translates to: TRLNIKRNLTAQTSHYYTTLLAK*NFRERC Trigger: GCATCTCTCTCTAAAGTTCAATTTTGCAAGCAGAGT...GGTGTAATAGTGCGATGTCTGTGCGGTTAGGTTTCTTTTAATGTTCAACCTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| 3UTR-3UTR CAA 90 bp | AATCCTGCCTCTTTGATCTCATCATACCATTGGGACAGTTTCAGTTTTCTGCTCACTCTGCTTGCAAAATaGAACTTTAGAGAGAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: NPASLISSYHWDSFSFLLTLLAK*NFRERC Trigger: GCATCTCTCTCTAAAGTTCAATTTTGCAAGCAGAGT...GAGCAGAAAACTGAAACTGTCCCAATGGTATGATGAGATCAAAGAGGCAGGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGAACTCAGGCCAGTAATAGCTTTTATGACAGTGATTACAATGTAAACTTAATGGGTTTCTTCCCCTaGGTGAGAAATGGCAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: MGTQASNSFYDSDYNVNLMGFFP*VRNGKE Trigger: CTCCTTGCCATTTCTCACCAAGGGGAAGAAACCCAT...TAAGTTTACATTGTAATCACTGTCATAAAAGCTATTACTGGCCTGAGTTCCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCTTTGATCTCATCATACCATTGGGACAGTTTCAGTTTTCTGCTCTGGTTTATCTGGACTCTAAATTaGAACTGCAAAGTGTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: ASLISSYHWDSFSFLLWFIWTLN*NCKVSL Trigger: AAGGGACACTTTGCAGTTCAAATTTAGAGTCCAGAT...AAACCAGAGCAGAAAACTGAAACTGTCCCAATGGTATGATGAGATCAAAGAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| 3UTR CCA 72 bp | ATAACTATTCGTTCATTTGTAGATGCTCCACACATCTaGTCAAGGCAGGAATTTCTTCTCCTTGATAACACC | + |
|
Preference number: 3 (lower is better) Translates to: ITIRSFVDAPHI*SRQEFLLLDNT Trigger: GGTGTTATCAAGGAGAAGAAATTCCTGCCTTGACCAGATGTGTGGAGCATCTACAAATGAACGAATAGTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR GCA 90 bp | TCTAGCACAGCACAAAAACCAACAACACCCGGTCACCACATGACAGAACAAACTTGCTACTGGAGACTCTaGGGGAGCGCTGCCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSTAQKPTTPGHHMTEQTCYWRL*GSAACS Trigger: GCTACAGGCAGCGCTCCCGCAGAGTCTCCAGTAGCA...AGTTTGTTCTGTCATGTGGTGACCGGGTGTTGTTGGTTTTTGTGCTGTGCTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR CCA 90 bp | TTAGAGCTCAAAACACTTCTGGAAGCAGAGGGCACAGCAGTACTGACCTTTTTAGAGAACAGGACTCGGTaGCATCCCGCTGCTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LELKTLLEAEGTAVLTFLENRTR*HPAAAH Trigger: GTGAGCAGCAGCGGGATGCCACCGAGTCCTGTTCTC...TAAAAAGGTCAGTACTGCTGTGCCCTCTGCTTCCAGAAGTGTTTTGAGCTCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CCA 90 bp | CAACAAGGACAAGAAGAGGGTTCTGACTCTAGCACAGCACAAAAACCAACAACAGAGAACAGGACTCGGTaGCATCCCGCTGCTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QQGQEEGSDSSTAQKPTTENRTR*HPAAAH Trigger: GTGAGCAGCAGCGGGATGCCACCGAGTCCTGTTCTC...TGTTGTTGGTTTTTGTGCTGTGCTAGAGTCAGAACCCTCTTCTTGTCCTTGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR GCA 90 bp | GAGCTCAAAACACTTCTGGAAGCAGAGGGCACAGCAGTACTGACCTTTTTAGCTGTGGCATCCCGCTGCTaGTCACAAACATTTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ELKTLLEAEGTAVLTFLAVASRC*SQTFAR Trigger: CCTTGCAAATGTTTGTGAGCAGCAGCGGGATGCCAC...AGCTAAAAAGGTCAGTACTGCTGTGCCCTCTGCTTCCAGAAGTGTTTTGAGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR GCA 90 bp | ACCAGGTTGAACATTAAAAGAAACCTAACCGCACAGACATCGCACTATTACACCTGCTACTGGAGACTCTaGGGGAGCGCTGCCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: TRLNIKRNLTAQTSHYYTCYWRL*GSAACS Trigger: GCTACAGGCAGCGCTCCCGCAGAGTCTCCAGTAGCA...GGTGTAATAGTGCGATGTCTGTGCGGTTAGGTTTCTTTTAATGTTCAACCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| 3UTR CAA 72 bp | ATGGTGGTGATGGAAGCAACTATGGGTTTCTTCCCCTaGGTGAGAAATGGCAAGGAGCAGGTCAAACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MVVMEATMGFFP*VRNGKEQVKQA Trigger: TGCCTGTTTGACCTGCTCCTTGCCATTTCTCACCAAGGGGAAGAAACCCATAGTTGCTTCCATCACCACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR GCA 90 bp | CTCCACACATCTGGTCAAGGCAGGAATTTCTTCTCCTTGATAACACCACCTAGAGTGGCATCCCGCTGCTaGTCACAAACATTTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHTSGQGRNFFSLITPPRVASRC*SQTFAR Trigger: CCTTGCAAATGTTTGTGAGCAGCAGCGGGATGCCAC...TCTAGGTGGTGTTATCAAGGAGAAGAAATTCCTGCCTTGACCAGATGTGTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR CCA 90 bp | ATCGGAATGGTTGCAATCTGCCAAACTTTAATCCCCATTGTGGATCAAAGTTCTGAGAACAGGACTCGGTaGCATCCCGCTGCTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IGMVAICQTLIPIVDQSSENRTR*HPAAAH Trigger: GTGAGCAGCAGCGGGATGCCACCGAGTCCTGTTCTC...AGAACTTTGATCCACAATGGGGATTAAAGTTTGGCAGATTGCAACCATTCCGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR CCA 90 bp | ATAGGGCAACAAGGACAAGAAGAGGGTTCTGACTCTAGCACAGCACAAAAACCACACTTGACCGGGCTCTaGCTCCTCCTGCTTGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IGQQGQEEGSDSSTAQKPHLTGL*LLLLEK Trigger: TTTTTCAAGCAGGAGGAGCCAGAGCCCGGTCAAGTG...TGGTTTTTGTGCTGTGCTAGAGTCAGAACCCTCTTCTTGTCCTTGTTGCCCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071023.12 |
||
| CDS-3UTR CCA 90 bp | CAACAAGGACAAGAAGAGGGTTCTGACTCTAGCACAGCACAAAAACCAACAACAATTGGAGCATGCTACTaGAGACTCTGCGGGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QQGQEEGSDSSTAQKPTTIGACY*RLCGSA Trigger: AGCGCTCCCGCAGAGTCTCCAGTAGCATGCTCCAAT...TGTTGTTGGTTTTTGTGCTGTGCTAGAGTCAGAACCCTCTTCTTGTCCTTGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR GCA 90 bp | TCTATAGGGCAACAAGGACAAGAAGAGGGTTCTGACTCTAGCACAGCACAAAAAGTGGCATCCCGCTGCTaGTCACAAACATTTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SIGQQGQEEGSDSSTAQKVASRC*SQTFAR Trigger: CCTTGCAAATGTTTGTGAGCAGCAGCGGGATGCCAC...TTTTTGTGCTGTGCTAGAGTCAGAACCCTCTTCTTGTCCTTGTTGCCCTATAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR GCA 90 bp | ATCCCCATTGTGGATCAAAGTTCTCCGCATTCCTCACTGAATGTTTTATGTGGGTCGGTGGCATCCCGCTaGTGCTCACAAACATTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IPIVDQSSPHSSLNVLCGSVASR*CSQTFA Trigger: TGCAAATGTTTGTGAGCAGCAGCGGGATGCCACCGA...CCCACATAAAACATTCAGTGAGGAATGCGGAGAACTTTGATCCACAATGGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR CCA 90 bp | TCTATAGGGCAACAAGGACAAGAAGAGGGTTCTGACTCTAGCACAGCACAAAAAAGGTCACTGAGCACATaGATCAGGGGAGCACTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SIGQQGQEEGSDSSTAQKRSLST*IRGALL Trigger: CAACAGTGCTCCCCTGATCCATGTGCTCAGTGACCT...TTTTTGTGCTGTGCTAGAGTCAGAACCCTCTTCTTGTCCTTGTTGCCCTATAGA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR TCA 90 bp | CAACAAGGACAAGAAGAGGGTTCTGACTCTAGCACAGCACAAAAACCAACAACAGATGAACGGAGAGCATaGATTGGAGCATGCTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QQGQEEGSDSSTAQKPTTDERRA*IGACYW Trigger: CCAGTAGCATGCTCCAATTCATGCTCTCCGTTCATC...TGTTGTTGGTTTTTGTGCTGTGCTAGAGTCAGAACCCTCTTCTTGTCCTTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR GCA 90 bp | GCCTCTTTGATCTCATCATACCATTGGGACAGTTTCAGTTTTCTGCTCTGGTTTTCGGTGGCATCCCGCTaGTGCTCACAAACATTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASLISSYHWDSFSFLLWFSVASR*CSQTFA Trigger: TGCAAATGTTTGTGAGCAGCAGCGGGATGCCACCGA...AAACCAGAGCAGAAAACTGAAACTGTCCCAATGGTATGATGAGATCAAAGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CCA 90 bp | AATCCTGCCTCTTTGATCTCATCATACCATTGGGACAGTTTCAGTTTTCTGCTCGCTTTCCAAATCCTCTaGTTGGGGAAGGAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NPASLISSYHWDSFSFLLAFQIL*LGKELE Trigger: CTCCAGCTCCTTCCCCAACCAGAGGATTTGGAAAGC...GAGCAGAAAACTGAAACTGTCCCAATGGTATGATGAGATCAAAGAGGCAGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CCA 90 bp | TCTAGCACAGCACAAAAACCAACAACACCCGGTCACCACATGACAGAACAAACTACGGAGAGCATGAATTaGAGCATGCTACTGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: SSTAQKPTTPGHHMTEQTTESMN*SMLLET Trigger: AGTCTCCAGTAGCATGCTCCAATTCATGCTCTCCGT...AGTTTGTTCTGTCATGTGGTGACCGGGTGTTGTTGGTTTTTGTGCTGTGCTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR GCA 90 bp | TCTAGCACAGCACAAAAACCAACAACACCCGGTCACCACATGACAGAACAAACTCTGCATCCCTGCTTGTaGTTCCCTTTCATTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSTAQKPTTPGHHMTEQTLHPCL*FPFICS Trigger: ACTACAAATGAAAGGGAAGCACAAGCAGGGATGCAG...AGTTTGTTCTGTCATGTGGTGACCGGGTGTTGTTGGTTTTTGTGCTGTGCTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR GCA 90 bp | CTCCACACATCTGGTCAAGGCAGGAATTTCTTCTCCTTGATAACACCACCTAGACTGCTCACAAACATTTaGAAGGATGGCGACAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LHTSGQGRNFFSLITPPRLLTNI*KDGDKH Trigger: ATGCTTGTCGCCATCCTTGCAAATGTTTGTGAGCAG...TCTAGGTGGTGTTATCAAGGAGAAGAAATTCCTGCCTTGACCAGATGTGTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR GCA 90 bp | ACATCTGGTCAAGGCAGGAATTTCTTCTCCTTGATAACACCACCTAGAAATATCTCGGTGGCATCCCGCTaGTGCTCACAAACATTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSGQGRNFFSLITPPRNISVASR*CSQTFA Trigger: TGCAAATGTTTGTGAGCAGCAGCGGGATGCCACCGA...GATATTTCTAGGTGGTGTTATCAAGGAGAAGAAATTCCTGCCTTGACCAGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR CCA 90 bp | ACATCTGGTCAAGGCAGGAATTTCTTCTCCTTGATAACACCACCTAGAAATATCAGGTCACTGAGCACATaGATCAGGGGAGCACTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TSGQGRNFFSLITPPRNIRSLST*IRGALL Trigger: CAACAGTGCTCCCCTGATCCATGTGCTCAGTGACCT...GATATTTCTAGGTGGTGTTATCAAGGAGAAGAAATTCCTGCCTTGACCAGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR CCA 90 bp | ACATCTGGTCAAGGCAGGAATTTCTTCTCCTTGATAACACCACCTAGAAATATCGCTTTCCAAATCCTCTaGTTGGGGAAGGAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TSGQGRNFFSLITPPRNIAFQIL*LGKELE Trigger: CTCCAGCTCCTTCCCCAACCAGAGGATTTGGAAAGC...GATATTTCTAGGTGGTGTTATCAAGGAGAAGAAATTCCTGCCTTGACCAGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR CCA 90 bp | CAGCACATTTATGTTAGGTTTGGAGGATTAGGAGCTTTTCACAGGCTAAAGAAAATTGGAGCATGCTACTaGAGACTCTGCGGGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QHIYVRFGGLGAFHRLKKIGACY*RLCGSA Trigger: AGCGCTCCCGCAGAGTCTCCAGTAGCATGCTCCAAT...TTTCTTTAGCCTGTGAAAAGCTCCTAATCCTCCAAACCTAACATAAATGTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR TCA 90 bp | ACCAGGTTGAACATTAAAAGAAACCTAACCGCACAGACATCGCACTATTACACCCTGGCTCCTCCTGCTTaGAAAATGTCTTGGATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TRLNIKRNLTAQTSHYYTLAPPA*KMSWIE Trigger: CTCAATCCAAGACATTTTTCAAGCAGGAGGAGCCAG...GGTGTAATAGTGCGATGTCTGTGCGGTTAGGTTTCTTTTAATGTTCAACCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071023.12 |
||
| CDS-3UTR TCA 90 bp | TTGGTCTCAAACAGTAAAGGGAATCCTGCCTCTTTGATCTCATCATACCATTGGAGGACAAGCCACTGCTaGTACTACTGCCATCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LVSNSKGNPASLISSYHWRTSHC*YYCHPK Trigger: TTTTGGATGGCAGTAGTATCAGCAGTGGCTTGTCCT...CCAATGGTATGATGAGATCAAAGAGGCAGGATTCCCTTTACTGTTTGAGACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR TCA 90 bp | ACATCTGGTCAAGGCAGGAATTTCTTCTCCTTGATAACACCACCTAGAAATATCGATGAACGGAGAGCATaGATTGGAGCATGCTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSGQGRNFFSLITPPRNIDERRA*IGACYW Trigger: CCAGTAGCATGCTCCAATTCATGCTCTCCGTTCATC...GATATTTCTAGGTGGTGTTATCAAGGAGAAGAAATTCCTGCCTTGACCAGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR TCA 90 bp | TTGGTCTCAAACAGTAAAGGGAATCCTGCCTCTTTGATCTCATCATACCATTGGGCTCTGGCTCCTCCTTaGAAAATGTCTTGGATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVSNSKGNPASLISSYHWALAPP*KMSWIE Trigger: CTCAATCCAAGACATTTTTCAAGGAGGAGCCAGAGC...CCAATGGTATGATGAGATCAAAGAGGCAGGATTCCCTTTACTGTTTGAGACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR GCA 90 bp | TCTATAGGGCAACAAGGACAAGAAGAGGGTTCTGACTCTAGCACAGCACAAAAACTGCATCCCTGCTTGTaGTTCCCTTTCATTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SIGQQGQEEGSDSSTAQKLHPCL*FPFICS Trigger: ACTACAAATGAAAGGGAAGCACAAGCAGGGATGCAG...TTTTTGTGCTGTGCTAGAGTCAGAACCCTCTTCTTGTCCTTGTTGCCCTATAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR GCA 90 bp | ACCAGGTTGAACATTAAAAGAAACCTAACCGCACAGACATCGCACTATTACACCGGCTCTGGCTCCTCCTaGTTGAAAAATGTCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TRLNIKRNLTAQTSHYYTGSGSS*LKNVLD Trigger: ATCCAAGACATTTTTCAAGCAGGAGGAGCCAGAGCC...GGTGTAATAGTGCGATGTCTGTGCGGTTAGGTTTCTTTTAATGTTCAACCTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071023.12 |
||
| CDS-3UTR CCA 90 bp | ATAGGGCAACAAGGACAAGAAGAGGGTTCTGACTCTAGCACAGCACAAAAACCAAAACATTTGCAAGGATaGCGACAAGCATTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IGQQGQEEGSDSSTAQKPKHLQG*RQALLS Trigger: GGAAAGCAATGCTTGTCGCCATCCTTGCAAATGTTT...TGGTTTTTGTGCTGTGCTAGAGTCAGAACCCTCTTCTTGTCCTTGTTGCCCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CCA 90 bp | TCTAGCACAGCACAAAAACCAACAACACCCGGTCACCACATGACAGAACAAACTAAACATTTGCAAGGATaGCGACAAGCATTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSTAQKPTTPGHHMTEQTKHLQG*RQALLS Trigger: GGAAAGCAATGCTTGTCGCCATCCTTGCAAATGTTT...AGTTTGTTCTGTCATGTGGTGACCGGGTGTTGTTGGTTTTTGTGCTGTGCTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CCA 90 bp | GCCTCTTTGATCTCATCATACCATTGGGACAGTTTCAGTTTTCTGCTCTGGTTTAAGGGTCTCTTAGGCTaGCTTTCCATCTCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASLISSYHWDSFSFLLWFKGLLG*LSISIS Trigger: GGAAATGGAGATGGAAAGCCAGCCTAAGAGACCCTT...AAACCAGAGCAGAAAACTGAAACTGTCCCAATGGTATGATGAGATCAAAGAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CCA 90 bp | ACCAGGTTGAACATTAAAAGAAACCTAACCGCACAGACATCGCACTATTACACCACGGAGAGCATGAATTaGAGCATGCTACTGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: TRLNIKRNLTAQTSHYYTTESMN*SMLLET Trigger: AGTCTCCAGTAGCATGCTCCAATTCATGCTCTCCGT...GGTGTAATAGTGCGATGTCTGTGCGGTTAGGTTTCTTTTAATGTTCAACCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR TCA 90 bp | TTGGTCTCAAACAGTAAAGGGAATCCTGCCTCTTTGATCTCATCATACCATTGGAAAAATGTCTTGGATTaGGAACAGGACTCGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVSNSKGNPASLISSYHWKNVLD*EQDSVA Trigger: TGCCACCGAGTCCTGTTCTCAATCCAAGACATTTTT...CCAATGGTATGATGAGATCAAAGAGGCAGGATTCCCTTTACTGTTTGAGACCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGCTTTTCACAGGCTAAAGAAACATGGGAACTCAGGCCAGTAATAGCTTTTGATCATCCATCAAGATaGACGGAGAGCATGAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSFSQAKETWELRPVIAFDHPSR*TESMNW Trigger: CCAATTCATGCTCTCCGTTCATCTTGATGGATGATC...AAAAGCTATTACTGGCCTGAGTTCCCATGTTTCTTTAGCCTGTGAAAAGCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR GCA 90 bp | GCCTCTTTGATCTCATCATACCATTGGGACAGTTTCAGTTTTCTGCTCTGGTTTCTGCTCACAAACATTTaGAAGGATGGCGACAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASLISSYHWDSFSFLLWFLLTNI*KDGDKH Trigger: ATGCTTGTCGCCATCCTTGCAAATGTTTGTGAGCAG...AAACCAGAGCAGAAAACTGAAACTGTCCCAATGGTATGATGAGATCAAAGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR GCA 90 bp | ATAGGGCAACAAGGACAAGAAGAGGGTTCTGACTCTAGCACAGCACAAAAACCAGAAATCAGACAATTGTaGAGGATTGGTAGACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IGQQGQEEGSDSSTAQKPEIRQL*RIGRQH Trigger: ATGCTGTCTACCAATCCTGCACAATTGTCTGATTTC...TGGTTTTTGTGCTGTGCTAGAGTCAGAACCCTCTTCTTGTCCTTGTTGCCCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAACCTAACCGCACAGACATCGCACTATTACACCATTTCTAGTGTAATAGCTTTCCAAATCCTCTaGTTGGGGAAGGAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KRNLTAQTSHYYTISSVIAFQIL*LGKELE Trigger: CTCCAGCTCCTTCCCCAACCAGAGGATTTGGAAAGC...TATTACACTAGAAATGGTGTAATAGTGCGATGTCTGTGCGGTTAGGTTTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CCA 90 bp | ACATCTGGTCAAGGCAGGAATTTCTTCTCCTTGATAACACCACCTAGAAATATCAAGGGTCTCTTAGGCTaGCTTTCCATCTCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSGQGRNFFSLITPPRNIKGLLG*LSISIS Trigger: GGAAATGGAGATGGAAAGCCAGCCTAAGAGACCCTT...GATATTTCTAGGTGGTGTTATCAAGGAGAAGAAATTCCTGCCTTGACCAGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR CCA 90 bp | AATCCTGCCTCTTTGATCTCATCATACCATTGGGACAGTTTCAGTTTTCTGCTCGATGCTCCACACATCTaGTCAAGGCAGGAATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NPASLISSYHWDSFSFLLDAPHI*SRQEFL Trigger: AAGAAATTCCTGCCTTGACCAGATGTGTGGAGCATC...GAGCAGAAAACTGAAACTGTCCCAATGGTATGATGAGATCAAAGAGGCAGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114841.2 |
||
| CDS-3UTR TCA 90 bp | ATCGGAATGGTTGCAATCTGCCAAACTTTAATCCCCATTGTGGATCAAAGTTCTAAAAATGTCTTGGATTaGGAACAGGACTCGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IGMVAICQTLIPIVDQSSKNVLD*EQDSVA Trigger: TGCCACCGAGTCCTGTTCTCAATCCAAGACATTTTT...AGAACTTTGATCCACAATGGGGATTAAAGTTTGGCAGATTGCAACCATTCCGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR TCA 90 bp | ACATCTGGTCAAGGCAGGAATTTCTTCTCCTTGATAACACCACCTAGAAATATCGATCATCCATCAAGATaGACGGAGAGCATGAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSGQGRNFFSLITPPRNIDHPSR*TESMNW Trigger: CCAATTCATGCTCTCCGTTCATCTTGATGGATGATC...GATATTTCTAGGTGGTGTTATCAAGGAGAAGAAATTCCTGCCTTGACCAGATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR GCA 90 bp | TTAGAGCTCAAAACACTTCTGGAAGCAGAGGGCACAGCAGTACTGACCTTTTTAGAAATCAGACAATTGTaGAGGATTGGTAGACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LELKTLLEAEGTAVLTFLEIRQL*RIGRQH Trigger: ATGCTGTCTACCAATCCTGCACAATTGTCTGATTTC...TAAAAAGGTCAGTACTGCTGTGCCCTCTGCTTCCAGAAGTGTTTTGAGCTCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR GCA 90 bp | CAACAAGGACAAGAAGAGGGTTCTGACTCTAGCACAGCACAAAAACCAACAACAGAAATCAGACAATTGTaGAGGATTGGTAGACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QQGQEEGSDSSTAQKPTTEIRQL*RIGRQH Trigger: ATGCTGTCTACCAATCCTGCACAATTGTCTGATTTC...TGTTGTTGGTTTTTGTGCTGTGCTAGAGTCAGAACCCTCTTCTTGTCCTTGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTCTCAAACAGTAAAGGGAATCCTGCCTCTTTGATCTCATCATACCATTGGAAACATTTGCAAGGATaGCGACAAGCATTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVSNSKGNPASLISSYHWKHLQG*RQALLS Trigger: GGAAAGCAATGCTTGTCGCCATCCTTGCAAATGTTT...CCAATGGTATGATGAGATCAAAGAGGCAGGATTCCCTTTACTGTTTGAGACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| 3UTR CAA 72 bp | GAGTTGGTCTCAAACAGTAAAGGGAATCCTGCCTCTTaGATCTCATCATACCATTGGGACAGTTTCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ELVSNSKGNPAS*ISSYHWDSFSF Trigger: AAAACTGAAACTGTCCCAATGGTATGATGAGATCAAAGAGGCAGGATTCCCTTTACTGTTTGAGACCAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR TCA 90 bp | ATTTATGTTAGGTTTGGAGGATTAGGAGCTTTTCACAGGCTAAAGAAACATGGGAAAAATGTCTTGGATTaGGAACAGGACTCGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IYVRFGGLGAFHRLKKHGKNVLD*EQDSVA Trigger: TGCCACCGAGTCCTGTTCTCAATCCAAGACATTTTT...CCCATGTTTCTTTAGCCTGTGAAAAGCTCCTAATCCTCCAAACCTAACATAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CCA 90 bp | CAGCACATTTATGTTAGGTTTGGAGGATTAGGAGCTTTTCACAGGCTAAAGAAACCTCCCAGTTCTAAGTaGATATGGCTCAAAAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: QHIYVRFGGLGAFHRLKKPPSSK*IWLKNL Trigger: CAGGTTTTTGAGCCATATCCACTTAGAACTGGGAGG...TTTCTTTAGCCTGTGAAAAGCTCCTAATCCTCCAAACCTAACATAAATGTGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR TCA 90 bp | GATTACAATGTAAACTTAAGACCTGATTCTATAATGGAACTGCAGCAAGCTAAGGCTCTGGCTCCTCCTTaGAAAATGTCTTGGATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DYNVNLRPDSIMELQQAKALAPP*KMSWIE Trigger: CTCAATCCAAGACATTTTTCAAGGAGGAGCCAGAGC...CTTAGCTTGCTGCAGTTCCATTATAGAATCAGGTCTTAAGTTTACATTGTAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR TCA 90 bp | GCCTCTTTGATCTCATCATACCATTGGGACAGTTTCAGTTTTCTGCTCTGGTTTTTGATAACACCACCATaGACTGAAATCAGACAATTG | + |
|
Preference number: 4 (lower is better) Translates to: ASLISSYHWDSFSFLLWFLITPP*TEIRQL Trigger: CAATTGTCTGATTTCAGTTCATGGTGGTGTTATCAA...AAACCAGAGCAGAAAACTGAAACTGTCCCAATGGTATGATGAGATCAAAGAGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114841.2 |
||
| CDS-3UTR GCA 90 bp | CAGCACATTTATGTTAGGTTTGGAGGATTAGGAGCTTTTCACAGGCTAAAGAAATCGTTCATTTGTAGATaGTCCACACATCTGGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QHIYVRFGGLGAFHRLKKSFICR*STHLVK Trigger: CTTGACCAGATGTGTGGAGCATCTACAAATGAACGA...TTTCTTTAGCCTGTGAAAAGCTCCTAATCCTCCAAACCTAACATAAATGTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114841.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAACCTAACCGCACAGACATCGCACTATTACACCATTTCTAGTGTAATACCTCCCAGTTCTAAGTaGATATGGCTCAAAAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: KRNLTAQTSHYYTISSVIPPSSK*IWLKNL Trigger: CAGGTTTTTGAGCCATATCCACTTAGAACTGGGAGG...TATTACACTAGAAATGGTGTAATAGTGCGATGTCTGTGCGGTTAGGTTTCTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CCA 90 bp | GACAGTGATTACAATGTAAACTTAAGACCTGATTCTATAATGGAACTGCAGCAAAAGGGTCTCTTAGGCTaGCTTTCCATCTCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSDYNVNLRPDSIMELQQKGLLG*LSISIS Trigger: GGAAATGGAGATGGAAAGCCAGCCTAAGAGACCCTT...TTGCTGCAGTTCCATTATAGAATCAGGTCTTAAGTTTACATTGTAATCACTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| 3UTR CAA 72 bp | CAAACAGATGTTAGTAAGGTGACTCTGCTTGCAAAATaGAACTTTAGAGAGAGATGCCCAGAAATAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QTDVSKVTLLAK*NFRERCPEIGA Trigger: TGCTCCTATTTCTGGGCATCTCTCTCTAAAGTTCAATTTTGCAAGCAGAGTCACCTTACTAACATCTGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR GCA 90 bp | GATTACAATGTAAACTTAAGACCTGATTCTATAATGGAACTGCAGCAAGCTAAGCTGCATCCCTGCTTGTaGTTCCCTTTCATTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: DYNVNLRPDSIMELQQAKLHPCL*FPFICS Trigger: ACTACAAATGAAAGGGAAGCACAAGCAGGGATGCAG...CTTAGCTTGCTGCAGTTCCATTATAGAATCAGGTCTTAAGTTTACATTGTAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CCA 90 bp | ATGGGAACTCAGGCCAGTAATAGCTTTTATGACAGTGATTACAATGTAAACTTACCTCCCAGTTCTAAGTaGATATGGCTCAAAAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: MGTQASNSFYDSDYNVNLPPSSK*IWLKNL Trigger: CAGGTTTTTGAGCCATATCCACTTAGAACTGGGAGG...TAAGTTTACATTGTAATCACTGTCATAAAAGCTATTACTGGCCTGAGTTCCCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| 3UTR CAA 72 bp | AGGGAAAAAGTCCTCCAAGCAATCAGAAATGTGTATTaGAGATTTAGTCATCAAACGCAAAATGAGATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: REKVLQAIRNVY*RFSHQTQNEIS Trigger: GCTGATCTCATTTTGCGTTTGATGACTAAATCTCAAATACACATTTCTGATTGCTTGGAGGACTTTTTCCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| 3UTR CAA 72 bp | ATTGAAAACACTCAATTAGAAACATTAGTAAAAGAGTaGGTCTCAAACAGTAAAGGGAATCCTGCCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IENTQLETLVKE*VSNSKGNPASL Trigger: CAAAGAGGCAGGATTCCCTTTACTGTTTGAGACCAACTCTTTTACTAATGTTTCTAATTGAGTGTTTTCAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CAA 90 bp | TCTAGCACAGCACAAAAACCAACAACACCCGGTCACCACATGACAGAACAAACTCATGCTGGTGGTGCCTaGGAAGGGTCTCTTAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSTAQKPTTPGHHMTEQTHAGGA*EGSLRL Trigger: CAGCCTAAGAGACCCTTCCAAGGCACCACCAGCATG...AGTTTGTTCTGTCATGTGGTGACCGGGTGTTGTTGGTTTTTGTGCTGTGCTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CAA 90 bp | TGCTTAGAGCTCAAAACACTTCTGGAAGCAGAGGGCACAGCAGTACTGACCTTTGCTGCTCACAAACATTaGCAAGGATGGCGACAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CLELKTLLEAEGTAVLTFAAHKH*QGWRQA Trigger: TGCTTGTCGCCATCCTTGCAAATGTTTGTGAGCAGC...AAAGGTCAGTACTGCTGTGCCCTCTGCTTCCAGAAGTGTTTTGAGCTCTAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CAA 90 bp | TCTAGCACAGCACAAAAACCAACAACACCCGGTCACCACATGACAGAACAAACTGGATGGCGACAAGCATaGCTTTCCAAATCCTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSTAQKPTTPGHHMTEQTGWRQA*LSKSSG Trigger: ACCAGAGGATTTGGAAAGCAATGCTTGTCGCCATCC...AGTTTGTTCTGTCATGTGGTGACCGGGTGTTGTTGGTTTTTGTGCTGTGCTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CAA 90 bp | CTCCACACATCTGGTCAAGGCAGGAATTTCTTCTCCTTGATAACACCACCTAGAAACGGAGAGCATGAATaGGAGCATGCTACTGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LHTSGQGRNFFSLITPPRNGEHE*EHATGD Trigger: GTCTCCAGTAGCATGCTCCAATTCATGCTCTCCGTT...TCTAGGTGGTGTTATCAAGGAGAAGAAATTCCTGCCTTGACCAGATGTGTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTAGAGCTCAAAACACTTCTGGAAGCAGAGGGCACAGCAGTACTGACCTTTTATCTGCATCCCTGCTaGTGCTTCCCTTTCATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CLELKTLLEAEGTAVLTFYLHPC*CFPFIC Trigger: ACAAATGAAAGGGAAGCACAAGCAGGGATGCAGATA...AAAGGTCAGTACTGCTGTGCCCTCTGCTTCCAGAAGTGTTTTGAGCTCTAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CAA 90 bp | ATCCCCATTGTGGATCAAAGTTCTCCGCATTCCTCACTGAATGTTTTATGTGGGTTCCAAATCCTCTGGTaGGGGAAGGAGCTGGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: IPIVDQSSPHSSLNVLCGFQILW*GKELEK Trigger: TTTCTCCAGCTCCTTCCCCAACCAGAGGATTTGGAA...CCCACATAAAACATTCAGTGAGGAATGCGGAGAACTTTGATCCACAATGGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR CAA 90 bp | TTAGAGCTCAAAACACTTCTGGAAGCAGAGGGCACAGCAGTACTGACCTTTTTAGACAATTGTGCAGGATaGGTAGACAGCATGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LELKTLLEAEGTAVLTFLDNCAG*VDSMLV Trigger: CACCAGCATGCTGTCTACCAATCCTGCACAATTGTC...TAAAAAGGTCAGTACTGCTGTGCCCTCTGCTTCCAGAAGTGTTTTGAGCTCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CAA 90 bp | TCTATAGGGCAACAAGGACAAGAAGAGGGTTCTGACTCTAGCACAGCACAAAAAGACAATTGTGCAGGATaGGTAGACAGCATGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SIGQQGQEEGSDSSTAQKDNCAG*VDSMLV Trigger: CACCAGCATGCTGTCTACCAATCCTGCACAATTGTC...TTTTTGTGCTGTGCTAGAGTCAGAACCCTCTTCTTGTCCTTGTTGCCCTATAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CAA 90 bp | AAAAGAAACCTAACCGCACAGACATCGCACTATTACACCATTTCTAGTGTAATACATGCTGGTGGTGCCTaGGAAGGGTCTCTTAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KRNLTAQTSHYYTISSVIHAGGA*EGSLRL Trigger: CAGCCTAAGAGACCCTTCCAAGGCACCACCAGCATG...TATTACACTAGAAATGGTGTAATAGTGCGATGTCTGTGCGGTTAGGTTTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CAA 90 bp | ATGGGAACTCAGGCCAGTAATAGCTTTTATGACAGTGATTACAATGTAAACTTACATGCTGGTGGTGCCTaGGAAGGGTCTCTTAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MGTQASNSFYDSDYNVNLHAGGA*EGSLRL Trigger: CAGCCTAAGAGACCCTTCCAAGGCACCACCAGCATG...TAAGTTTACATTGTAATCACTGTCATAAAAGCTATTACTGGCCTGAGTTCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS TCA 90 bp | ACATCTGGTCAAGGCAGGAATTTCTTCTCCTTGATAACACCACCATaGACTGAAATCAGACAATTGTGCAGGATTGGTAGACAGCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: TSGQGRNFFSLITPP*TEIRQLCRIGRQHA Trigger: AGCATGCTGTCTACCAATCCTGCACAATTGTCTGATTTCAGTTCATGGTGGTGTTATCAAGGAGAAGAAATTCCTGCCTTGACCAGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114841.2 |
||
| CDS-3UTR CAA 90 bp | TTGGTCTCAAACAGTAAAGGGAATCCTGCCTCTTTGATCTCATCATACCATTGGTATCTGCATCCCTGCTaGTGCTTCCCTTTCATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LVSNSKGNPASLISSYHWYLHPC*CFPFIC Trigger: ACAAATGAAAGGGAAGCACAAGCAGGGATGCAGATA...CCAATGGTATGATGAGATCAAAGAGGCAGGATTCCCTTTACTGTTTGAGACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CAA 90 bp | ATTTATGTTAGGTTTGGAGGATTAGGAGCTTTTCACAGGCTAAAGAAACATGGGGACAATTGTGCAGGATaGGTAGACAGCATGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IYVRFGGLGAFHRLKKHGDNCAG*VDSMLV Trigger: CACCAGCATGCTGTCTACCAATCCTGCACAATTGTC...CCCATGTTTCTTTAGCCTGTGAAAAGCTCCTAATCCTCCAAACCTAACATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CAA 90 bp | ACATCTGGTCAAGGCAGGAATTTCTTCTCCTTGATAACACCACCTAGAAATATCTATCTGCATCCCTGCTaGTGCTTCCCTTTCATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TSGQGRNFFSLITPPRNIYLHPC*CFPFIC Trigger: ACAAATGAAAGGGAAGCACAAGCAGGGATGCAGATA...GATATTTCTAGGTGGTGTTATCAAGGAGAAGAAATTCCTGCCTTGACCAGATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGAAACCTAACCGCACAGACATCGCACTATTACACCATTTCTAGTGTAATATTCCAAATCCTCTGGTaGGGGAAGGAGCTGGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KRNLTAQTSHYYTISSVIFQILW*GKELEK Trigger: TTTCTCCAGCTCCTTCCCCAACCAGAGGATTTGGAA...TATTACACTAGAAATGGTGTAATAGTGCGATGTCTGTGCGGTTAGGTTTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CAA 90 bp | GCCTCTTTGATCTCATCATACCATTGGGACAGTTTCAGTTTTCTGCTCTGGTTTACTGAAATCAGACAATaGTGCAGGATTGGTAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: ASLISSYHWDSFSFLLWFTEIRQ*CRIGRQ Trigger: CTGTCTACCAATCCTGCACAATTGTCTGATTTCAGT...AAACCAGAGCAGAAAACTGAAACTGTCCCAATGGTATGATGAGATCAAAGAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CAA 90 bp | GACAGTGATTACAATGTAAACTTAAGACCTGATTCTATAATGGAACTGCAGCAAGGATGGCGACAAGCATaGCTTTCCAAATCCTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: DSDYNVNLRPDSIMELQQGWRQA*LSKSSG Trigger: ACCAGAGGATTTGGAAAGCAATGCTTGTCGCCATCC...TTGCTGCAGTTCCATTATAGAATCAGGTCTTAAGTTTACATTGTAATCACTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CAA 90 bp | GACAGTGATTACAATGTAAACTTAAGACCTGATTCTATAATGGAACTGCAGCAAGCTGCTCACAAACATTaGCAAGGATGGCGACAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DSDYNVNLRPDSIMELQQAAHKH*QGWRQA Trigger: TGCTTGTCGCCATCCTTGCAAATGTTTGTGAGCAGC...TTGCTGCAGTTCCATTATAGAATCAGGTCTTAAGTTTACATTGTAATCACTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CAA 90 bp | ATGGGAACTCAGGCCAGTAATAGCTTTTATGACAGTGATTACAATGTAAACTTAGCTGCTCACAAACATTaGCAAGGATGGCGACAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: MGTQASNSFYDSDYNVNLAAHKH*QGWRQA Trigger: TGCTTGTCGCCATCCTTGCAAATGTTTGTGAGCAGC...TAAGTTTACATTGTAATCACTGTCATAAAAGCTATTACTGGCCTGAGTTCCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CAA 90 bp | GATTACAATGTAAACTTAAGACCTGATTCTATAATGGAACTGCAGCAAGCTAAGAACGGAGAGCATGAATaGGAGCATGCTACTGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: DYNVNLRPDSIMELQQAKNGEHE*EHATGD Trigger: GTCTCCAGTAGCATGCTCCAATTCATGCTCTCCGTT...CTTAGCTTGCTGCAGTTCCATTATAGAATCAGGTCTTAAGTTTACATTGTAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGAAACCTAACCGCACAGACATCGCACTATTACACCATTTCTAGTGTAATAACTGAAATCAGACAATaGTGCAGGATTGGTAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: KRNLTAQTSHYYTISSVITEIRQ*CRIGRQ Trigger: CTGTCTACCAATCCTGCACAATTGTCTGATTTCAGT...TATTACACTAGAAATGGTGTAATAGTGCGATGTCTGTGCGGTTAGGTTTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS-3UTR CAA 90 bp | ATGGGAACTCAGGCCAGTAATAGCTTTTATGACAGTGATTACAATGTAAACTTAACTGAAATCAGACAATaGTGCAGGATTGGTAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: MGTQASNSFYDSDYNVNLTEIRQ*CRIGRQ Trigger: CTGTCTACCAATCCTGCACAATTGTCTGATTTCAGT...TAAGTTTACATTGTAATCACTGTCATAAAAGCTATTACTGGCCTGAGTTCCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
||
| CDS CAA 72 bp | GAAAGGTCACTGAGCACATGGATCAGGGGAGCACTGTaGGACCGTCTCAGGGTGGCCCCCTCAGATGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ERSLSTWIRGAL*DRLRVAPSDVS Trigger: TGACACATCTGAGGGGGCCACCCTGAGACGGTCCAACAGTGCTCCCCTGATCCATGTGCTCAGTGACCTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| CDS CAA 72 bp | GGGCTCTGGCTCCTCCTGCTTGAAAAATGTCTTGGATaGAGAACAGGACTCGGTGGCATCCCGCTGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: GLWLLLLEKCLG*RTGLGGIPLLL Trigger: GAGCAGCAGCGGGATGCCACCGAGTCCTGTTCTCAATCCAAGACATTTTTCAAGCAGGAGGAGCCAGAGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071023.12 |
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| CDS CAA 72 bp | ACCGGGCTCTGGCTCCTCCTTGAAAAATGTCTTGGATaGAGAACAGGACTCGGTGGCATCCCGCTGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: TGLWLLLEKCLG*RTGLGGIPLLL Trigger: GAGCAGCAGCGGGATGCCACCGAGTCCTGTTCTCAATCCAAGACATTTTTCAAGGAGGAGCCAGAGCCCGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| CDS TCA 72 bp | GGCTCTGGCTCCTCCTGCTTGAAAAATGTCTTGGATTaGGAACAGGACTCGGTGGCATCCCGCTGCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: GSGSSCLKNVLD*EQDSVASRCCS Trigger: TGAGCAGCAGCGGGATGCCACCGAGTCCTGTTCTCAATCCAAGACATTTTTCAAGCAGGAGGAGCCAGAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071023.12 |
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| CDS CAA 90 bp | CACTTGGGTGAGAGATCATCCATCAAGATGAACGGAGAGCATGAATaGGAGCATGCTACTGGAGACTCTGCGGGAGCGCTGCCTGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: HLGERSSIKMNGEHE*EHATGDSAGALPVA Trigger: GGCTACAGGCAGCGCTCCCGCAGAGTCTCCAGTAGCATGCTCCAATTCATGCTCTCCGTTCATCTTGATGGATGATCTCTCACCCAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| CDS CCA 72 bp | TATGGCTCAAAAACCTGTGAAAGGTCACTGAGCACATaGATCAGGGGAGCACTGTTGGACCGTCTCAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: YGSKTCERSLST*IRGALLDRLRV Trigger: CACCCTGAGACGGTCCAACAGTGCTCCCCTGATCCATGTGCTCAGTGACCTTTCACAGGTTTTTGAGCCATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| CDS CCA 72 bp | TGTGCAGGATTGGTAGACAGCATGCTGGTGGTGCCTTaGAAGGGTCTCTTAGGCTGGCTTTCCATCTCCATT | + |
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Preference number: 6 (lower is better) Translates to: CAGLVDSMLVVP*KGLLGWLSISI Trigger: AATGGAGATGGAAAGCCAGCCTAAGAGACCCTTCCAAGGCACCACCAGCATGCTGTCTACCAATCCTGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| CDS CAA 72 bp | TTGTGCAGGATTGGTAGACAGCATGCTGGTGGTGCCTaGGAAGGGTCTCTTAGGCTGGCTTTCCATCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LCRIGRQHAGGA*EGSLRLAFHLH Trigger: ATGGAGATGGAAAGCCAGCCTAAGAGACCCTTCCAAGGCACCACCAGCATGCTGTCTACCAATCCTGCACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| CDS CAA 72 bp | GAGAGATCATCCATCAAGATGAACGGAGAGCATGAATaGGAGCATGCTACTGGAGACTCTGCGGGAGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: ERSSIKMNGEHE*EHATGDSAGAL Trigger: CAGCGCTCCCGCAGAGTCTCCAGTAGCATGCTCCAATTCATGCTCTCCGTTCATCTTGATGGATGATCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 |
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| CDS CAA 72 bp | GCTGCTCACAAACATTTGCAAGGATGGCGACAAGCATaGCTTTCCAAATCCTCTGGTTGGGGAAGGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: AAHKHLQGWRQA*LSKSSGWGRSW Trigger: CCAGCTCCTTCCCCAACCAGAGGATTTGGAAAGCAATGCTTGTCGCCATCCTTGCAAATGTTTGTGAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| CDS CAA 90 bp | ATCAGACAATTGTGCAGGATTGGTAGACAGCATGCTGGTGGTGCCTaGGAAGGGTCTCTTAGGCTGGCTTTCCATCTCCATTTCCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: IRQLCRIGRQHAGGA*EGSLRLAFHLHFPF Trigger: AAAGGGGAAATGGAGATGGAAAGCCAGCCTAAGAGACCCTTCCAAGGCACCACCAGCATGCTGTCTACCAATCCTGCACAATTGTCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| CDS TCA 72 bp | CCTCCCAGTTCTAAGTGGATATGGCTCAAAAACCTGTaGAAGGTCACTGAGCACATGGATCAGGGGAGCACT | + |
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Preference number: 6 (lower is better) Translates to: PPSSKWIWLKNL*KVTEHMDQGST Trigger: AGTGCTCCCCTGATCCATGTGCTCAGTGACCTTTCACAGGTTTTTGAGCCATATCCACTTAGAACTGGGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| CDS GCA 72 bp | CTCAGGCTCAGGCTTTCGTCCCATGACTGGCTTATCTaGATCCCTGCTTGTGCTTCCCTTTCATTTGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: LRLRLSSHDWLI*IPACASLSFVV Trigger: AACTACAAATGAAAGGGAAGCACAAGCAGGGATGCAGATAAGCCAGTCATGGGACGAAAGCCTGAGCCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| CDS CCA 72 bp | GCATTGCTTTCCAAATCCTCTGGTTGGGGAAGGAGCTaGAGAAACTGGAGTGAAGTCAATTCTTTTGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: ALLSKSSGWGRS*RNWSEVNSFGR Trigger: TCTCCCAAAAGAATTGACTTCACTCCAGTTTCTCCAGCTCCTTCCCCAACCAGAGGATTTGGAAAGCAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| CDS CAA 90 bp | ACTGGAGTGAAGTCAATTCTTTTGGGAGAATATAATTTCTCTGGCTaGTCAAAATCACTATCACTCAGGCTCAGGCTTTCGTCCCATGAC | + |
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Preference number: 6 (lower is better) Translates to: TGVKSILLGEYNFSG*SKSLSLRLRLSSHD Trigger: GTCATGGGACGAAAGCCTGAGCCTGAGTGATAGTGATTTTGACAAGCCAGAGAAATTATATTCTCCCAAAAGAATTGACTTCACTCCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071023.12 ENSMUST00000114838.8 ENSMUST00000114841.2 |
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| CDS TCA 72 bp | CAAGGCAGGAATTTCTTCTCCTTGATAACACCACCATaGACTGAAATCAGACAATTGTGCAGGATTGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: QGRNFFSLITPP*TEIRQLCRIGR Trigger: TCTACCAATCCTGCACAATTGTCTGATTTCAGTTCATGGTGGTGTTATCAAGGAGAAGAAATTCCTGCCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114841.2 |
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