RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM122A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000074922

Ensembl transcript IDs: ENSMUST00000099556.2

Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CCGGCGAGGCCGGGAGCAGCAGGCCGTGGCGGCTCGGGAACGTCGTaGTGTTCCGTCTGGCGCTGGGCGCCTCGGCCTGGAACACCGGCG +
Preference number: 5 (lower is better)
Translates to: PARPGAAGRGGSGTS*CSVWRWAPRPGTPA
Trigger: CGCCGGTGTTCCAGGCCGAGGCGCCCAGCGCCAGACGGAACAGCACGACGTTCCCGAGCCGCCACGGCCTGCTGCTCCCGGCCTCGCCGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS CCA 90 bp CGGCTGCTGTGCATTCGGACCGGCGAGGCCGGGAGCAGCAGGCCGTaGCGGCTCGGGAACGTCGTGCTGTTCCGTCTGGCGCTGGGCGCC +
Preference number: 5 (lower is better)
Translates to: RLLCIRTGEAGSSRP*RLGNVVLFRLALGA
Trigger: GGCGCCCAGCGCCAGACGGAACAGCACGACGTTCCCGAGCCGCCACGGCCTGCTGCTCCCGGCCTCGCCGGTCCGAATGCACAGCAGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS GCA 90 bp AGGTCCATGCCCTCCTCCTGTTTGATCTGGTGCAGGCGGCTGCTGTaGATTCGGACCGGCGAGGCCGGGAGCAGCAGGCCGTGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: RSMPSSCLIWCRRLL*IRTGEAGSSRPWRL
Trigger: GAGCCGCCACGGCCTGCTGCTCCCGGCCTCGCCGGTCCGAATGCACAGCAGCCGCCTGCACCAGATCAAACAGGAGGAGGGCATGGACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS GCA 90 bp GTCTCTCGGTTGATCAGGTCCATGCCCTCCTCCTGTTTGATCTGGTaGAGGCGGCTGCTGTGCATTCGGACCGGCGAGGCCGGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: VSRLIRSMPSSCLIW*RRLLCIRTGEAGSS
Trigger: GCTGCTCCCGGCCTCGCCGGTCCGAATGCACAGCAGCCGCCTGCACCAGATCAAACAGGAGGAGGGCATGGACCTGATCAACCGAGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS CCA 90 bp ACGGTCTCTCGGTTGATCAGGTCCATGCCCTCCTCCTGTTTGATCTaGTGCAGGCGGCTGCTGTGCATTCGGACCGGCGAGGCCGGGAGC +
Preference number: 5 (lower is better)
Translates to: TVSRLIRSMPSSCLI*CRRLLCIRTGEAGS
Trigger: GCTCCCGGCCTCGCCGGTCCGAATGCACAGCAGCCGCCTGCACCAGATCAAACAGGAGGAGGGCATGGACCTGATCAACCGAGAGACCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS CCA 90 bp GCAGTTGATGGGACTCTGGCTTCTCCGGGTGGTAAATCGGGTGGTTaGGCTGGGAATGGGACTTGGAGGCAGTCCGTTGCTACTCACAAA +
Preference number: 5 (lower is better)
Translates to: AVDGTLASPGGKSGG*AGNGTWRQSVATHK
Trigger: TTTGTGAGTAGCAACGGACTGCCTCCAAGTCCCATTCCCAGCCCAACCACCCGATTTACCACCCGGAGAAGCCAGAGTCCCATCAACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS TCA 90 bp GCTGTTTCCATCCAGGGTATCGGAAGATACGCACACACCGGGGTCTaGCAGCTGTGCAACGTCAGAAGACAGCATGTTGGTGATGCCCTG +
Preference number: 5 (lower is better)
Translates to: AVSIQGIGRYAHTGV*QLCNVRRQHVGDAL
Trigger: CAGGGCATCACCAACATGCTGTCTTCTGACGTTGCACAGCTGTCAGACCCCGGTGTGTGCGTATCTTCCGATACCCTGGATGGAAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS CCA 90 bp CACTTTGAGGAAAGTTCATCTACTGGAATAAAGGGGGAGGCTGCTTaGGCGGGCGACACAGGAGAGTCGGTGGTAGTGCTGACTTTCGCT +
Preference number: 5 (lower is better)
Translates to: HFEESSSTGIKGEAA*AGDTGESVVVLTFA
Trigger: AGCGAAAGTCAGCACTACCACCGACTCTCCTGTGTCGCCCGCCCAAGCAGCCTCCCCCTTTATTCCAGTAGATGAACTTTCCTCAAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS GCA 72 bp CCGGGAGCAGCAGGCCGTGGCGGCTCGGGAACGTCGTaGTGTTCCGTCTGGCGCTGGGCGCCTCGGCCTGGA +
Preference number: 6 (lower is better)
Translates to: PGAAGRGGSGTS*CSVWRWAPRPG
Trigger: TCCAGGCCGAGGCGCCCAGCGCCAGACGGAACAGCACGACGTTCCCGAGCCGCCACGGCCTGCTGCTCCCGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS CCA 72 bp GGCCGTGGCGGCTCGGGAACGTCGTGCTGTTCCGTCTaGCGCTGGGCGCCTCGGCCTGGAACACCGGCGACG +
Preference number: 6 (lower is better)
Translates to: GRGGSGTSCCSV*RWAPRPGTPAT
Trigger: CGTCGCCGGTGTTCCAGGCCGAGGCGCCCAGCGCCAGACGGAACAGCACGACGTTCCCGAGCCGCCACGGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS CCA 72 bp GGCGGCTCGGGAACGTCGTGCTGTTCCGTCTGGCGCTaGGCGCCTCGGCCTGGAACACCGGCGACGAGTCGC +
Preference number: 6 (lower is better)
Translates to: GGSGTSCCSVWR*APRPGTPATSR
Trigger: GCGACTCGTCGCCGGTGTTCCAGGCCGAGGCGCCCAGCGCCAGACGGAACAGCACGACGTTCCCGAGCCGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS CCA 72 bp TGCATTCGGACCGGCGAGGCCGGGAGCAGCAGGCCGTaGCGGCTCGGGAACGTCGTGCTGTTCCGTCTGGCG +
Preference number: 6 (lower is better)
Translates to: CIRTGEAGSSRP*RLGNVVLFRLA
Trigger: CGCCAGACGGAACAGCACGACGTTCCCGAGCCGCCACGGCCTGCTGCTCCCGGCCTCGCCGGTCCGAATGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS GCA 72 bp CCCTCCTCCTGTTTGATCTGGTGCAGGCGGCTGCTGTaGATTCGGACCGGCGAGGCCGGGAGCAGCAGGCCG +
Preference number: 6 (lower is better)
Translates to: PSSCLIWCRRLL*IRTGEAGSSRP
Trigger: CGGCCTGCTGCTCCCGGCCTCGCCGGTCCGAATGCACAGCAGCCGCCTGCACCAGATCAAACAGGAGGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS GCA 72 bp TTGATCAGGTCCATGCCCTCCTCCTGTTTGATCTGGTaGAGGCGGCTGCTGTGCATTCGGACCGGCGAGGCC +
Preference number: 6 (lower is better)
Translates to: LIRSMPSSCLIW*RRLLCIRTGEA
Trigger: GGCCTCGCCGGTCCGAATGCACAGCAGCCGCCTGCACCAGATCAAACAGGAGGAGGGCATGGACCTGATCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS CCA 72 bp CGGTTGATCAGGTCCATGCCCTCCTCCTGTTTGATCTaGTGCAGGCGGCTGCTGTGCATTCGGACCGGCGAG +
Preference number: 6 (lower is better)
Translates to: RLIRSMPSSCLI*CRRLLCIRTGE
Trigger: CTCGCCGGTCCGAATGCACAGCAGCCGCCTGCACCAGATCAAACAGGAGGAGGGCATGGACCTGATCAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS GCA 72 bp GAAACACTGCTTCCCAATTCCCCGGGTCGGGGACGGTaGCGGAGACACCGGAATGAAATCGATGCGCTTCGG +
Preference number: 6 (lower is better)
Translates to: ETLLPNSPGRGR*RRHRNEIDALR
Trigger: CCGAAGCGCATCGATTTCATTCCGGTGTCTCCGGCACCGTCCCCGACCCGGGGAATTGGGAAGCAGTGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS CCA 72 bp GGGACTCTGGCTTCTCCGGGTGGTAAATCGGGTGGTTaGGCTGGGAATGGGACTTGGAGGCAGTCCGTTGCT +
Preference number: 6 (lower is better)
Translates to: GTLASPGGKSGG*AGNGTWRQSVA
Trigger: AGCAACGGACTGCCTCCAAGTCCCATTCCCAGCCCAACCACCCGATTTACCACCCGGAGAAGCCAGAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS TCA 72 bp TGGCTTATCTGCATTGCGGTCTGCACCTCGCGCTCGTaGACGGTCTCTCGGTTGATCAGGTCCATGCCCTCC +
Preference number: 6 (lower is better)
Translates to: WLICIAVCTSRS*TVSRLIRSMPS
Trigger: GGAGGGCATGGACCTGATCAACCGAGAGACCGTTCACGAGCGCGAGGTGCAGACCGCAATGCAGATAAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS CAA 72 bp GTCTCTCGGTTGATCAGGTCCATGCCCTCCTCCTGTTaGATCTGGTGCAGGCGGCTGCTGTGCATTCGGACC +
Preference number: 6 (lower is better)
Translates to: VSRLIRSMPSSC*IWCRRLLCIRT
Trigger: GGTCCGAATGCACAGCAGCCGCCTGCACCAGATCAAACAGGAGGAGGGCATGGACCTGATCAACCGAGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS CAA 72 bp TCGATGCGCTTCGGGGAGGCGGATTTCTCCACGTCGTaGTCACTCAGGCTGAAACTTTCCTCCCAGGAGTGG +
Preference number: 6 (lower is better)
Translates to: SMRFGEADFSTS*SLRLKLSSQEW
Trigger: CCACTCCTGGGAGGAAAGTTTCAGCCTGAGTGACAACGACGTGGAGAAATCCGCCTCCCCGAAGCGCATCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS CCA 72 bp GAAAGTTCATCTACTGGAATAAAGGGGGAGGCTGCTTaGGCGGGCGACACAGGAGAGTCGGTGGTAGTGCTG +
Preference number: 6 (lower is better)
Translates to: ESSSTGIKGEAA*AGDTGESVVVL
Trigger: CAGCACTACCACCGACTCTCCTGTGTCGCCCGCCCAAGCAGCCTCCCCCTTTATTCCAGTAGATGAACTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS CAA 72 bp GGAAAGTTCATCTACTGGAATAAAGGGGGAGGCTGCTaGGGCGGGCGACACAGGAGAGTCGGTGGTAGTGCT +
Preference number: 6 (lower is better)
Translates to: GKFIYWNKGGGC*GGRHRRVGGSA
Trigger: AGCACTACCACCGACTCTCCTGTGTCGCCCGCCCAAGCAGCCTCCCCCTTTATTCCAGTAGATGAACTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS TCA 72 bp ATCCAGGGTATCGGAAGATACGCACACACCGGGGTCTaGCAGCTGTGCAACGTCAGAAGACAGCATGTTGGT +
Preference number: 6 (lower is better)
Translates to: IQGIGRYAHTGV*QLCNVRRQHVG
Trigger: ACCAACATGCTGTCTTCTGACGTTGCACAGCTGTCAGACCCCGGTGTGTGCGTATCTTCCGATACCCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS GCA 72 bp CTTTCGCTGGTGAGTTACAGGAAGATCCGGCACTGCTaGTGTTTCCATCCAGGGTATCGGAAGATACGCACA +
Preference number: 6 (lower is better)
Translates to: LSLVSYRKIRHC*CFHPGYRKIRT
Trigger: TGTGCGTATCTTCCGATACCCTGGATGGAAACAGCAGCAGTGCCGGATCTTCCTGTAACTCACCAGCGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS CCA 72 bp GGTGGTAAATCGGGTGGTTGGGCTGGGAATGGGACTTaGAGGCAGTCCGTTGCTACTCACAAAACTTTGCAA +
Preference number: 6 (lower is better)
Translates to: GGKSGGWAGNGT*RQSVATHKTLQ
Trigger: TTGCAAAGTTTTGTGAGTAGCAACGGACTGCCTCCAAGTCCCATTCCCAGCCCAACCACCCGATTTACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2
CDS CAA 72 bp GTGGTTGGGCTGGGAATGGGACTTGGAGGCAGTCCGTaGCTACTCACAAAACTTTGCAAGGACGGTGAGAAA +
Preference number: 6 (lower is better)
Translates to: VVGLGMGLGGSP*LLTKLCKDGEK
Trigger: TTTCTCACCGTCCTTGCAAAGTTTTGTGAGTAGCAACGGACTGCCTCCAAGTCCCATTCCCAGCCCAACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099556.2