Pregenerated sensors for FAM120B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014763Ensembl transcript IDs: ENSMUST00000055352.8
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCAGTTGGCTCGTCCTCGCCTGGCTCCTGTCACATACCCCAACATaGTGGTCCGAGGCTCTACCACCCTATGGAACTCTAAGACCCAAA | + |
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Preference number: 1 (lower is better) Translates to: PSWLVLAWLLSHTPT*WSEALPPYGTLRPK Trigger: TTTGGGTCTTAGAGTTCCATAGGGTGGTAGAGCCTCGGACCATCATGTTGGGGTATGTGACAGGAGCCAGGCGAGGACGAGCCAACTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR CCA 90 bp | TCTGCCTCTCACAGAGGCCAGAAGAGGCTTTCGATCCCCTGGAACTaGAGTTTCAGACAGTTAGTTGTGAGCCACCGTGTGGGTGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: SASHRGQKRLSIPWN*SFRQLVVSHRVGEG Trigger: CCCCTCACCCACACGGTGGCTCACAACTAACTGTCTGAAACTCCAGTTCCAGGGGATCGAAAGCCTCTTCTGGCCTCTGTGAGAGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR GCA 90 bp | TATGGGTGTTTTGCCTGTGTGCATGTCTGGGCATCACTGTGTGTCTaGCTCTCACAGAGGCCAGAAGAGGCTTTCGATCCCCTGGAACTG | + |
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Preference number: 1 (lower is better) Translates to: YGCFACVHVWASLCV*LSQRPEEAFDPLEL Trigger: CAGTTCCAGGGGATCGAAAGCCTCTTCTGGCCTCTGTGAGAGGCAGACACACAGTGATGCCCAGACATGCACACAGGCAAAACACCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR TCA 90 bp | AGAATCTCAAGGAGAAACGCAAGGCCTCTCTCTGCACAGCATGGTTaGGCCAGTGGTCTGGAAAACTGTCAGCGTAAAGGTGACAAGGTA | + |
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Preference number: 1 (lower is better) Translates to: RISRRNARPLSAQHG*ASGLENCQRKGDKV Trigger: TACCTTGTCACCTTTACGCTGACAGTTTTCCAGACCACTGGCTCAACCATGCTGTGCAGAGAGAGGCCTTGCGTTTCTCCTTGAGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR CCA 90 bp | GAAACGCAAGGCCTCTCTCTGCACAGCATGGTTGAGCCAGTGGTCTaGAAAACTGTCAGCGTAAAGGTGACAAGGTACATTTTTAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: ETQGLSLHSMVEPVV*KTVSVKVTRYIFRS Trigger: GCTTCTAAAAATGTACCTTGTCACCTTTACGCTGACAGTTTTCCAGACCACTGGCTCAACCATGCTGTGCAGAGAGAGGCCTTGCGTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR CCA 90 bp | GGTCAGGAGAGCATTCTCAATGATAGTGTCAAGTGTTCTGGATCATaGAGTCAGGAGCAACCTCTGAAACAAACCAATGGGATATTTTTA | + |
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Preference number: 1 (lower is better) Translates to: GQESILNDSVKCSGS*SQEQPLKQTNGIFL Trigger: TAAAAATATCCCATTGGTTTGTTTCAGAGGTTGCTCCTGACTCCATGATCCAGAACACTTGACACTATCATTGAGAATGCTCTCCTGACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR TCA 90 bp | ACGTACTCATGCATTTTATTGACAAGTGTCAGGATGCAGTTTCCATaGCGGAAAACAACTTTCATAGAAATAGACTTTCAACTTAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: TYSCILLTSVRMQFP*RKTTFIEIDFQLKR Trigger: TCTCTTAAGTTGAAAGTCTATTTCTATGAAAGTTGTTTTCCGTCATGGAAACTGCATCCTGACACTTGTCAATAAAATGCATGAGTACGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAGACAGTTAGTTGTGAGCCACCGTGTGGGTGAGGGGAATCTGGAAGAGCAGGAAGTTTCAAAACCCTaGGCCATTCCCAGTTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: FRQLVVSHRVGEGNLEEQEVSKP*AIPSWL Trigger: GAGCCAACTGGGAATGGCTCAGGGTTTTGAAACTTC...CTGCTCTTCCAGATTCCCCTCACCCACACGGTGGCTCACAACTAACTGTCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTCTGCACAGCATGGTTGAGCCAGTGGTCTGGAAAACTGTCAGCGTAAAGTTGGTCTCCAGTTGGTaGGAAGGACTAGGAGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: LSLHSMVEPVVWKTVSVKLVSSW*EGLGGV Trigger: CACTCCTCCTAGTCCTTCCCACCAACTGGAGACCAA...CTTTACGCTGACAGTTTTCCAGACCACTGGCTCAACCATGCTGTGCAGAGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTCTCTGCACAGCATGGTTGAGCCAGTGGTCTGGAAAACTGTCAGCGTAAAGGGTGTTTTGCCTGTGTaGATGTCTGGGCATCACTGT | + |
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Preference number: 2 (lower is better) Translates to: LSLHSMVEPVVWKTVSVKGVLPV*MSGHHC Trigger: ACAGTGATGCCCAGACATGCACACAGGCAAAACACC...CTTTACGCTGACAGTTTTCCAGACCACTGGCTCAACCATGCTGTGCAGAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGGCTTTCGATCCCCTGGAACTGGAGTTTCAGACAGTTAGTTGTGAGCCACCGGAGGGCAGAGTCTaGACATTGATCCTGTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: EEAFDPLELEFQTVSCEPPEGRV*TLILFP Trigger: TGGAAACAGGATCAATGTCCAGACTCTGCCCTCCGG...TGGCTCACAACTAACTGTCTGAAACTCCAGTTCCAGGGGATCGAAAGCCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGAATCTCAAGGAGAAACGCAAGGCCTCTCTCTGCACAGCATGGTTGAGCCAAGGCTTTCGATCCCCTaGAACTGGAGTTTCAGACAG | + |
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Preference number: 2 (lower is better) Translates to: QESQGETQGLSLHSMVEPRLSIP*NWSFRQ Trigger: CTGTCTGAAACTCCAGTTCCAGGGGATCGAAAGCCT...TGGCTCAACCATGCTGTGCAGAGAGAGGCCTTGCGTTTCTCCTTGAGATTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGAATCTCAAGGAGAAACGCAAGGCCTCTCTCTGCACAGCATGGTTGAGCCAGCAGAGTCTGGACATTaGTCCTGTTTCCACACTCTT | + |
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Preference number: 2 (lower is better) Translates to: QESQGETQGLSLHSMVEPAESGH*SCFHTL Trigger: AAGAGTGTGGAAACAGGATCAATGTCCAGACTCTGC...TGGCTCAACCATGCTGTGCAGAGAGAGGCCTTGCGTTTCTCCTTGAGATTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAGGAGTGGCCTTACTGGAGGAGGTGTGGCTTTGCTGATGGAGGTGTGTCACTTGCTTTGTTCACAGTaGCTTTTCACAGTAACAGGA | + |
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Preference number: 2 (lower is better) Translates to: RRSGLTGGGVALLMEVCHLLCSQ*LFTVTG Trigger: TCCTGTTACTGTGAAAAGGCACTGTGAACAAAGCAA...GTGACACACCTCCATCAGCAAAGCCACACCTCCTCCAGTAAGGCCACTCCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTCTCTGCACAGCATGGTTGAGCCAGTGGTCTGGAAAACTGTCAGCGTAAAGTCTTTATGGGTGTTTTaGCTGTGTGCATGTCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LSLHSMVEPVVWKTVSVKSLWVF*LCACLG Trigger: GCCCAGACATGCACACAGGCAAAACACCCATAAAGA...CTTTACGCTGACAGTTTTCCAGACCACTGGCTCAACCATGCTGTGCAGAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCTGCAGGAGCAGAAGGAAGCTGAACAAATACAACCATGTTCAAATGCAGGCAGCTTGGTCTCCAGTTaGTGGGAAGGACTAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: VLQEQKEAEQIQPCSNAGSLVSS*WEGLGG Trigger: TCCTCCTAGTCCTTCCCACCAACTGGAGACCAAGCT...GCCTGCATTTGAACATGGTTGTATTTGTTCAGCTTCCTTCTGCTCCTGCAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR-3UTR CCA 90 bp | GACCAGAAGAGCCAAACTAGGCAGCAAAGTCATGGCAGCTACAAGCTCTGCAGAGTTGAGCCAGTGGTCTaGAAAACTGTCAGCGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: DQKSQTRQQSHGSYKLCRVEPVV*KTVSVK Trigger: CTTTACGCTGACAGTTTTCCAGACCACTGGCTCAAC...TCTGCAGAGCTTGTAGCTGCCATGACTTTGCTGCCTAGTTTGGCTCTTCTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGAATCTCAAGGAGAAACGCAAGGCCTCTCTCTGCACAGCATGGTTGAGCCATCGATCCCCTGGAACTaGAGTTTCAGACAGTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: QESQGETQGLSLHSMVEPSIPWN*SFRQLV Trigger: AACTAACTGTCTGAAACTCCAGTTCCAGGGGATCGA...TGGCTCAACCATGCTGTGCAGAGAGAGGCCTTGCGTTTCTCCTTGAGATTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGCAGAAGGAAGCTGAACAAATACAACCATGTTCAAATGCAGGCGAGATAGATCCCCAGTGGAGATaGATAAGAACCTCAAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: QEQKEAEQIQPCSNAGEIDPQWR*IRTSKR Trigger: CCTCTTTGAGGTTCTTATCCATCTCCACTGGGGATC...TATCTCGCCTGCATTTGAACATGGTTGTATTTGTTCAGCTTCCTTCTGCTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR-3UTR CAA 90 bp | TTCAGACAGTTAGTTGTGAGCCACCGTGTGGGTGAGGGGAATCTGGAAGAGCAGCCCCAGTTGCTGTCCTaGTTGCTGAGACCGGAGGGC | + |
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Preference number: 3 (lower is better) Translates to: FRQLVVSHRVGEGNLEEQPQLLS*LLRPEG Trigger: GCCCTCCGGTCTCAGCAACAAGGACAGCAACTGGGG...CTGCTCTTCCAGATTCCCCTCACCCACACGGTGGCTCACAACTAACTGTCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR TCA 72 bp | GGGGAATCTGGAAGAGCAGACCCTGTTCTTAACCGCTaGGCCAGGTTTCCTCCAAGCAGAACCAACTCGCCC | + |
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Preference number: 3 (lower is better) Translates to: GESGRADPVLNR*ARFPPSRTNSP Trigger: GGGCGAGTTGGTTCTGCTTGGAGGAAACCTGGCTCAGCGGTTAAGAACAGGGTCTGCTCTTCCAGATTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR-3UTR CAA 90 bp | GAAGAGGCTTTCGATCCCCTGGAACTGGAGTTTCAGACAGTTAGTTGTGAGCCACTGAGCCATTCCCAGTaGGCTCGTCCTCGCCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: EEAFDPLELEFQTVSCEPLSHSQ*ARPRLA Trigger: AGCCAGGCGAGGACGAGCCAACTGGGAATGGCTCAG...TGGCTCACAACTAACTGTCTGAAACTCCAGTTCCAGGGGATCGAAAGCCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR-3UTR CAA 90 bp | TTAGTTGTGAGCCACCGTGTGGGTGAGGGGAATCTGGAAGAGCAGACCCTGTTCAAGCTTGGTCTCCAGTaGGTGGGAAGGACTAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: LVVSHRVGEGNLEEQTLFKLGLQ*VGRTRR Trigger: CCTCCTAGTCCTTCCCACCAACTGGAGACCAAGCTT...GAACAGGGTCTGCTCTTCCAGATTCCCCTCACCCACACGGTGGCTCACAACTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR GCA 72 bp | TTTGCCTGTGTGCATGTCTGGGCATCACTGTGTGTCTaGCTCTCACAGAGGCCAGAAGAGGCTTTCGATCCC | + |
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Preference number: 3 (lower is better) Translates to: FACVHVWASLCV*LSQRPEEAFDP Trigger: GGGATCGAAAGCCTCTTCTGGCCTCTGTGAGAGGCAGACACACAGTGATGCCCAGACATGCACACAGGCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR TCA 72 bp | GATACATCTTCCAGTGACCAAAGTGCTTGCATCTCCTaGCGGAACTCAGTGTCCCCAGAGATACGGCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: DTSSSDQSACIS*RNSVSPEIRQG Trigger: GCCCTGCCGTATCTCTGGGGACACTGAGTTCCGTCAGGAGATGCAAGCACTTTGGTCACTGGAAGATGTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR CCA 72 bp | CACAGAGGCCAGAAGAGGCTTTCGATCCCCTGGAACTaGAGTTTCAGACAGTTAGTTGTGAGCCACCGTGTG | + |
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Preference number: 3 (lower is better) Translates to: HRGQKRLSIPWN*SFRQLVVSHRV Trigger: CACACGGTGGCTCACAACTAACTGTCTGAAACTCCAGTTCCAGGGGATCGAAAGCCTCTTCTGGCCTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR CCA 72 bp | GCCTCTCACAGAGGCCAGAAGAGGCTTTCGATCCCCTaGAACTGGAGTTTCAGACAGTTAGTTGTGAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: ASHRGQKRLSIP*NWSFRQLVVSH Trigger: GTGGCTCACAACTAACTGTCTGAAACTCCAGTTCCAGGGGATCGAAAGCCTCTTCTGGCCTCTGTGAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR-3UTR CAA 90 bp | CAAGAATCTCAAGGAGAAACGCAAGGCCTCTCTCTGCACAGCATGGTTGAGCCACCTTCCTTTAAAGGGTaGCCCCAGTTGCTGTCCTTG | + |
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Preference number: 3 (lower is better) Translates to: QESQGETQGLSLHSMVEPPSFKG*PQLLSL Trigger: CAAGGACAGCAACTGGGGCAACCCTTTAAAGGAAGG...TGGCTCAACCATGCTGTGCAGAGAGAGGCCTTGCGTTTCTCCTTGAGATTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR TCA 72 bp | GAGTTTCAGACAGTTAGTTGTGAGCCACCGTGTGGGTaGGGGGAATCTGGAAGAGCAGACCCTGTTCTTAAC | + |
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Preference number: 3 (lower is better) Translates to: EFQTVSCEPPCG*GESGRADPVLN Trigger: GTTAAGAACAGGGTCTGCTCTTCCAGATTCCCCTCACCCACACGGTGGCTCACAACTAACTGTCTGAAACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR GCA 72 bp | CACAAGAATCTCAAGGAGAAACGCAAGGCCTCTCTCTaGACAGCATGGTTGAGCCAGTGGTCTGGAAAACTG | + |
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Preference number: 3 (lower is better) Translates to: HKNLKEKRKASL*TAWLSQWSGKL Trigger: CAGTTTTCCAGACCACTGGCTCAACCATGCTGTGCAGAGAGAGGCCTTGCGTTTCTCCTTGAGATTCTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR CCA 72 bp | TTGCTGTCCTTGTTGCTGAGACCGGAGGGCAGAGTCTaGACATTGATCCTGTTTCCACACTCTTCTGTACAG | + |
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Preference number: 3 (lower is better) Translates to: LLSLLLRPEGRV*TLILFPHSSVQ Trigger: CTGTACAGAAGAGTGTGGAAACAGGATCAATGTCCAGACTCTGCCCTCCGGTCTCAGCAACAAGGACAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR CCA 72 bp | GGCCTCTCTCTGCACAGCATGGTTGAGCCAGTGGTCTaGAAAACTGTCAGCGTAAAGGTGACAAGGTACATT | + |
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Preference number: 3 (lower is better) Translates to: GLSLHSMVEPVV*KTVSVKVTRYI Trigger: AATGTACCTTGTCACCTTTACGCTGACAGTTTTCCAGACCACTGGCTCAACCATGCTGTGCAGAGAGAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR-3UTR CAA 90 bp | GTCCTGCAGGAGCAGAAGGAAGCTGAACAAATACAACCATGTTCAAATGCAGGCAAAGGGTTGCCCCAGTaGCTGTCCTTGTTGCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: VLQEQKEAEQIQPCSNAGKGLPQ*LSLLLR Trigger: TCTCAGCAACAAGGACAGCAACTGGGGCAACCCTTT...GCCTGCATTTGAACATGGTTGTATTTGTTCAGCTTCCTTCTGCTCCTGCAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR-3UTR CAA 90 bp | CTCTCTCTGCACAGCATGGTTGAGCCAGTGGTCTGGAAAACTGTCAGCGTAAAGATCTTTATGGGTGTTTaGCCTGTGTGCATGTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: LSLHSMVEPVVWKTVSVKIFMGV*PVCMSG Trigger: CCCAGACATGCACACAGGCAAAACACCCATAAAGAT...CTTTACGCTGACAGTTTTCCAGACCACTGGCTCAACCATGCTGTGCAGAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR GCA 72 bp | CAAACTAGGCAGCAAAGTCATGGCAGCTACAAGCTCTaGAGACACACTATGCTTAAGTCCTGCAGGAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: QTRQQSHGSYKL*RHTMLKSCRSR Trigger: TCTGCTCCTGCAGGACTTAAGCATAGTGTGTCTGCAGAGCTTGTAGCTGCCATGACTTTGCTGCCTAGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR CCA 72 bp | TACCCCAACATGATGGTCCGAGGCTCTACCACCCTATaGAACTCTAAGACCCAAATCAAATGCTCTCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: YPNMMVRGSTTL*NSKTQIKCSLL Trigger: CAGAAGAGAGCATTTGATTTGGGTCTTAGAGTTCCATAGGGTGGTAGAGCCTCGGACCATCATGTTGGGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR-3UTR CAA 90 bp | GAAGAGGCTTTCGATCCCCTGGAACTGGAGTTTCAGACAGTTAGTTGTGAGCCAGCTCTCTTCTGTAAGTaGCTTTGTTCACAGTGCCTT | + |
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Preference number: 3 (lower is better) Translates to: EEAFDPLELEFQTVSCEPALFCK*LCSQCL Trigger: AAGGCACTGTGAACAAAGCAACTTACAGAAGAGAGC...TGGCTCACAACTAACTGTCTGAAACTCCAGTTCCAGGGGATCGAAAGCCTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR-3UTR CAA 90 bp | CAGGAGCAGAAGGAAGCTGAACAAATACAACCATGTTCAAATGCAGGCGAGATACTCTGCACAGCATGGTaGAGCCAGTGGTCTGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: QEQKEAEQIQPCSNAGEILCTAW*SQWSGK Trigger: TTTTCCAGACCACTGGCTCAACCATGCTGTGCAGAG...TATCTCGCCTGCATTTGAACATGGTTGTATTTGTTCAGCTTCCTTCTGCTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR GCA 72 bp | AGCTACAAGCTCTGCAGACACACTATGCTTAAGTCCTaGAGGAGCAGAAGGAAGCTGAACAAATACAACCAT | + |
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Preference number: 3 (lower is better) Translates to: SYKLCRHTMLKS*RSRRKLNKYNH Trigger: ATGGTTGTATTTGTTCAGCTTCCTTCTGCTCCTGCAGGACTTAAGCATAGTGTGTCTGCAGAGCTTGTAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR GCA 72 bp | CTTATTTATTTCATCTTTATGGGTGTTTTGCCTGTGTaGATGTCTGGGCATCACTGTGTGTCTGCCTCTCAC | + |
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Preference number: 3 (lower is better) Translates to: LIYFIFMGVLPV*MSGHHCVSASH Trigger: GTGAGAGGCAGACACACAGTGATGCCCAGACATGCACACAGGCAAAACACCCATAAAGATGAAATAAATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR CCA 72 bp | AGCATTCTCAATGATAGTGTCAAGTGTTCTGGATCATaGAGTCAGGAGCAACCTCTGAAACAAACCAATGGG | + |
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Preference number: 3 (lower is better) Translates to: SILNDSVKCSGS*SQEQPLKQTNG Trigger: CCCATTGGTTTGTTTCAGAGGTTGCTCCTGACTCCATGATCCAGAACACTTGACACTATCATTGAGAATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR TCA 72 bp | TCAAGTGTTCTGGATCATGGAGTCAGGAGCAACCTCTaGAACAAACCAATGGGATATTTTTATAGTTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: SSVLDHGVRSNL*NKPMGYFYSLC Trigger: ACACAAACTATAAAAATATCCCATTGGTTTGTTTCAGAGGTTGCTCCTGACTCCATGATCCAGAACACTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR TCA 72 bp | TGCATTTTATTGACAAGTGTCAGGATGCAGTTTCCATaGCGGAAAACAACTTTCATAGAAATAGACTTTCAA | + |
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Preference number: 3 (lower is better) Translates to: CILLTSVRMQFP*RKTTFIEIDFQ Trigger: TTGAAAGTCTATTTCTATGAAAGTTGTTTTCCGTCATGGAAACTGCATCCTGACACTTGTCAATAAAATGCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR GCA 90 bp | CAAGAATCTCAAGGAGAAACGCAAGGCCTCTCTCTGCACAGCATGGTTGAGCCAGCGCTGGGCCTGCACTaGTGGCTCTTGGCTCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: QESQGETQGLSLHSMVEPALGLH*WLLAQP Trigger: TGGCTGAGCCAAGAGCCAGCAGTGCAGGCCCAGCGC...TGGCTCAACCATGCTGTGCAGAGAGAGGCCTTGCGTTTCTCCTTGAGATTCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CCA 90 bp | CTCTCTCTGCACAGCATGGTTGAGCCAGTGGTCTGGAAAACTGTCAGCGTAAAGTGGCTCGGGAGGGCTTaGTCCAGCTCATCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LSLHSMVEPVVWKTVSVKWLGRA*SSSSSR Trigger: CCTGGAGGATGAGCTGGACCAAGCCCTCCCGAGCCA...CTTTACGCTGACAGTTTTCCAGACCACTGGCTCAACCATGCTGTGCAGAGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CCA 90 bp | CTTGTTGCTGAGACCGGAGGGCAGAGTCTGGACATTGATCCTGTTTCCACACTCTGCGCCGGTTCTCCTTaGAGCAGGCCTTGCAGACCA | + |
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Preference number: 4 (lower is better) Translates to: LVAETGGQSLDIDPVSTLCAGSP*SRPCRP Trigger: TGGTCTGCAAGGCCTGCTCCAAGGAGAACCGGCGCA...GAGTGTGGAAACAGGATCAATGTCCAGACTCTGCCCTCCGGTCTCAGCAACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR TCA 90 bp | TTCAGACAGTTAGTTGTGAGCCACCGTGTGGGTGAGGGGAATCTGGAAGAGCAGACACAAACCACTCCTTaGCCACTGGGCCAGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: FRQLVVSHRVGEGNLEEQTQTTP*PLGQCW Trigger: CCAGCACTGGCCCAGTGGTCAAGGAGTGGTTTGTGT...CTGCTCTTCCAGATTCCCCTCACCCACACGGTGGCTCACAACTAACTGTCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR GCA 90 bp | AGGAGGAGTGGCCTTACTGGAGGAGGTGTGGCTTTGCTGATGGAGGTGTGTCACCCTCCAGGGTGTTACTaGATTCTATCTCCCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: RRSGLTGGGVALLMEVCHPPGCY*ILSPHC Trigger: GCAGTGGGGAGATAGAATGCAGTAACACCCTGGAGG...GTGACACACCTCCATCAGCAAAGCCACACCTCCTCCAGTAAGGCCACTCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR GCA 90 bp | CTTGTTGCTGAGACCGGAGGGCAGAGTCTGGACATTGATCCTGTTTCCACACTCCCTTGGAGCAGGCCTTaGAGACCACTGCCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVAETGGQSLDIDPVSTLPWSRP*RPLPSG Trigger: ACCTGAAGGCAGTGGTCTGCAAGGCCTGCTCCAAGG...GAGTGTGGAAACAGGATCAATGTCCAGACTCTGCCCTCCGGTCTCAGCAACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR TCA 90 bp | TTAGTTGTGAGCCACCGTGTGGGTGAGGGGAATCTGGAAGAGCAGACCCTGTTCCCAGCCCAGAGGGAATaGAGAACATGTTTCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVVSHRVGEGNLEEQTLFPAQRE*RTCFCL Trigger: CAGGCAGAAACATGTTCTTCATTCCCTCTGGGCTGG...GAACAGGGTCTGCTCTTCCAGATTCCCCTCACCCACACGGTGGCTCACAACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR TCA 90 bp | TGTGTGTCTGCCTCTCACAGAGGCCAGAAGAGGCTTTCGATCCCCTGGAACTGGGCAGAGATCGCCAATTaGAAAGTAGGGGCAAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CVSASHRGQKRLSIPWNWAEIAN*KVGASV Trigger: GACACTTGCCCCTACTTTTCAATTGGCGATCTCTGC...CCAGTTCCAGGGGATCGAAAGCCTCTTCTGGCCTCTGTGAGAGGCAGACACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR GCA 90 bp | AGGGTTGCCCCAGTTGCTGTCCTTGTTGCTGAGACCGGAGGGCAGAGTCTGGACGGCAGAGGTGAAGGCTaGAACAAAATTTCTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RVAPVAVLVAETGGQSLDGRGEG*NKISQS Trigger: GCTTTGAGAAATTTTGTTGCAGCCTTCACCTCTGCC...GTCCAGACTCTGCCCTCCGGTCTCAGCAACAAGGACAGCAACTGGGGCAACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| 3UTR CAA 72 bp | CAGGGCCATAAGGGCCCTGGACAGGCACAGATACTCTaGGATCCCCAGTGGAGATGGATAAGAACCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QGHKGPGQAQIL*DPQWRWIRTSK Trigger: CTTTGAGGTTCTTATCCATCTCCACTGGGGATCCAAGAGTATCTGTGCCTGTCCAGGGCCCTTATGGCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR TCA 90 bp | TGTGTGTCTGCCTCTCACAGAGGCCAGAAGAGGCTTTCGATCCCCTGGAACTGGTTGCAGCTCTTCTCTTaGGGAGGAAAGGTTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CVSASHRGQKRLSIPWNWLQLFS*GGKVEA Trigger: TGCTTCAACCTTTCCTCCTCAAGAGAAGAGCTGCAA...CCAGTTCCAGGGGATCGAAAGCCTCTTCTGGCCTCTGTGAGAGGCAGACACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR TCA 90 bp | TGTGTGTCTGCCTCTCACAGAGGCCAGAAGAGGCTTTCGATCCCCTGGAACTGGGACTGCAGGTACTTCTaGTGGAAAAGCTTGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: CVSASHRGQKRLSIPWNWDCRYF*WKSLPS Trigger: TGATGGCAAGCTTTTCCATCAGAAGTACCTGCAGTC...CCAGTTCCAGGGGATCGAAAGCCTCTTCTGGCCTCTGTGAGAGGCAGACACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR GCA 90 bp | TTCAGACAGTTAGTTGTGAGCCACCGTGTGGGTGAGGGGAATCTGGAAGAGCAGGGCCTTGCAGACCACTaGCTTCAGGTTGTGGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: FRQLVVSHRVGEGNLEEQGLADH*LQVVEL Trigger: AAGTTCCACAACCTGAAGGCAGTGGTCTGCAAGGCC...CTGCTCTTCCAGATTCCCCTCACCCACACGGTGGCTCACAACTAACTGTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR GCA 90 bp | CGCAAGGCCTCTCTCTGCACAGCATGGTTGAGCCAGTGGTCTGGAAAACTGTCATGGTTTCTCCATGACTaGCCAGAATGGCCATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RKASLCTAWLSQWSGKLSWFLHD*PEWPCV Trigger: CACACATGGCCATTCTGGGCAGTCATGGAGAAACCA...TGACAGTTTTCCAGACCACTGGCTCAACCATGCTGTGCAGAGAGAGGCCTTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CCA 90 bp | TTAGTTGTGAGCCACCGTGTGGGTGAGGGGAATCTGGAAGAGCAGACCCTGTTCCACATGGAAGCTTCCTaGTTGGGCTCAGGATCCATA | + |
|
Preference number: 4 (lower is better) Translates to: LVVSHRVGEGNLEEQTLFHMEAS*LGSGSI Trigger: TATGGATCCTGAGCCCAACCAGGAAGCTTCCATGTG...GAACAGGGTCTGCTCTTCCAGATTCCCCTCACCCACACGGTGGCTCACAACTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CCA 90 bp | GACCAGAAGAGCCAAACTAGGCAGCAAAGTCATGGCAGCTACAAGCTCTGCAGACGGGATCTGTGCACATaGAAGCTTCCTGGTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DQKSQTRQQSHGSYKLCRRDLCT*KLPGWA Trigger: AGCCCAACCAGGAAGCTTCCATGTGCACAGATCCCG...TCTGCAGAGCTTGTAGCTGCCATGACTTTGCTGCCTAGTTTGGCTCTTCTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
||
| 3UTR CAA 72 bp | TTTCCTTCCTTTAAAGGGTTGCCCCAGTTGCTGTCCTaGTTGCTGAGACCGGAGGGCAGAGTCTGGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: FPSFKGLPQLLS*LLRPEGRVWTL Trigger: CAATGTCCAGACTCTGCCCTCCGGTCTCAGCAACAAGGACAGCAACTGGGGCAACCCTTTAAAGGAAGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR TCA 90 bp | CTTGTTGCTGAGACCGGAGGGCAGAGTCTGGACATTGATCCTGTTTCCACACTCACATGCTCTCTGGAGTaGTGTCATTGCCAAGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LVAETGGQSLDIDPVSTLTCSLE*CHCQAD Trigger: GTCTGCTTGGCAATGACATCACTCCAGAGAGCATGT...GAGTGTGGAAACAGGATCAATGTCCAGACTCTGCCCTCCGGTCTCAGCAACAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR GCA 90 bp | CTCTCTCTGCACAGCATGGTTGAGCCAGTGGTCTGGAAAACTGTCAGCGTAAAGGGGCTCTCAACTGCTTaGAGCTCTTCTCTTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSLHSMVEPVVWKTVSVKGLSTA*SSSLEE Trigger: CTCCTCAAGAGAAGAGCTGCAAGCAGTTGAGAGCCC...CTTTACGCTGACAGTTTTCCAGACCACTGGCTCAACCATGCTGTGCAGAGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
||
| CDS-3UTR CCA 90 bp | CGCAAGGCCTCTCTCTGCACAGCATGGTTGAGCCAGTGGTCTGGAAAACTGTCAGGACGTGATGCATCCTaGCAACCTTTAAGATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKASLCTAWLSQWSGKLSGRDAS*QPLRSQ Trigger: CTGAGATCTTAAAGGTTGCCAGGATGCATCACGTCC...TGACAGTTTTCCAGACCACTGGCTCAACCATGCTGTGCAGAGAGAGGCCTTGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR TCA 90 bp | CAAGAATCTCAAGGAGAAACGCAAGGCCTCTCTCTGCACAGCATGGTTGAGCCATTGAGGAGGAAAGGTTaGAGCAGGCTAGCAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QESQGETQGLSLHSMVEPLRRKG*SRLARC Trigger: ACACCTTGCTAGCCTGCTTCAACCTTTCCTCCTCAA...TGGCTCAACCATGCTGTGCAGAGAGAGGCCTTGCGTTTCTCCTTGAGATTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTCTGCCTCTCACAGAGGCCAGAAGAGGCTTTCGATCCCCTGGAACTGGAACCATGGAGATTTCTaGCCTGGCAAAAGATATGAG | + |
|
Preference number: 4 (lower is better) Translates to: CVSASHRGQKRLSIPWNWNHGDF*PGKRYE Trigger: CTCATATCTTTTGCCAGGGCAGAAATCTCCATGGTT...CCAGTTCCAGGGGATCGAAAGCCTCTTCTGGCCTCTGTGAGAGGCAGACACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CCA 90 bp | CGCAAGGCCTCTCTCTGCACAGCATGGTTGAGCCAGTGGTCTGGAAAACTGTCATGTAAGTGCATGAGCTaGGAGGTTGATTTTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKASLCTAWLSQWSGKLSCKCMS*EVDFPW Trigger: CCAAGGAAAATCAACCTCCCAGCTCATGCACTTACA...TGACAGTTTTCCAGACCACTGGCTCAACCATGCTGTGCAGAGAGAGGCCTTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CCA 90 bp | GACCAGAAGAGCCAAACTAGGCAGCAAAGTCATGGCAGCTACAAGCTCTGCAGAACTGCCTTCAGGTTGTaGAACTTGGTGAGCCACGAT | + |
|
Preference number: 4 (lower is better) Translates to: DQKSQTRQQSHGSYKLCRTAFRL*NLVSHD Trigger: ATCGTGGCTCACCAAGTTCCACAACCTGAAGGCAGT...TCTGCAGAGCTTGTAGCTGCCATGACTTTGCTGCCTAGTTTGGCTCTTCTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CCA 90 bp | GAAGAGGCTTTCGATCCCCTGGAACTGGAGTTTCAGACAGTTAGTTGTGAGCCACATGACTGCCCAGAATaGCCATGTGTGGAGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EEAFDPLELEFQTVSCEPHDCPE*PCVESV Trigger: GACAGACTCCACACATGGCCATTCTGGGCAGTCATG...TGGCTCACAACTAACTGTCTGAAACTCCAGTTCCAGGGGATCGAAAGCCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
||
| CDS-3UTR TCA 90 bp | GAAGAGGCTTTCGATCCCCTGGAACTGGAGTTTCAGACAGTTAGTTGTGAGCCACATGAGCTGGGAGGTTaGTTTTCCTTGGAGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: EEAFDPLELEFQTVSCEPHELGG*FSLEAQ Trigger: TTGTGCCTCCAAGGAAAATCAACCTCCCAGCTCATG...TGGCTCACAACTAACTGTCTGAAACTCCAGTTCCAGGGGATCGAAAGCCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR GCA 90 bp | CAAGAATCTCAAGGAGAAACGCAAGGCCTCTCTCTGCACAGCATGGTTGAGCCATCCCCGGCTCCACCATaGCATCAAAGAAGAATATCA | + |
|
Preference number: 4 (lower is better) Translates to: QESQGETQGLSLHSMVEPSPAPP*HQRRIS Trigger: TGATATTCTTCTTTGATGGCATGGTGGAGCCGGGGA...TGGCTCAACCATGCTGTGCAGAGAGAGGCCTTGCGTTTCTCCTTGAGATTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR GCA 90 bp | AGGGTTGCCCCAGTTGCTGTCCTTGTTGCTGAGACCGGAGGGCAGAGTCTGGACGAAACCATGGTTACTTaGTTTATTTCAGGTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: RVAPVAVLVAETGGQSLDETMVT*FISGSI Trigger: TATGGAACCTGAAATAAAGCAAGTAACCATGGTTTC...GTCCAGACTCTGCCCTCCGGTCTCAGCAACAAGGACAGCAACTGGGGCAACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR GCA 90 bp | CGCAAGGCCTCTCTCTGCACAGCATGGTTGAGCCAGTGGTCTGGAAAACTGTCATCTGATGGAAAAGCTTaGCATCAAACACATTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKASLCTAWLSQWSGKLSSDGKA*HQTHSR Trigger: CCTGGAATGTGTTTGATGGCAAGCTTTTCCATCAGA...TGACAGTTTTCCAGACCACTGGCTCAACCATGCTGTGCAGAGAGAGGCCTTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CCA 90 bp | GCATTCTCAATGATAGTGTCAAGTGTTCTGGATCATGGAGTCAGGAGCAACCTCGAACAGAAAGTCTCCTaGCCCAGTGTCTTCAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: AFSMIVSSVLDHGVRSNLEQKVS*PSVFRA Trigger: CGCCCTGAAGACACTGGGCCAGGAGACTTTCTGTTC...GAGGTTGCTCCTGACTCCATGATCCAGAACACTTGACACTATCATTGAGAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR TCA 90 bp | GCATTCTCAATGATAGTGTCAAGTGTTCTGGATCATGGAGTCAGGAGCAACCTCTGGAGGCACAAGGCCTaGGCGATAAATGCATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AFSMIVSSVLDHGVRSNLWRHKA*AINACR Trigger: TCTGCATGCATTTATCGCTCAGGCCTTGTGCCTCCA...GAGGTTGCTCCTGACTCCATGATCCAGAACACTTGACACTATCATTGAGAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR GCA 90 bp | TTAGTTGTGAGCCACCGTGTGGGTGAGGGGAATCTGGAAGAGCAGACCCTGTTCCACATAGGGACTTCTTaGTTGGATTCGGGATTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LVVSHRVGEGNLEEQTLFHIGTS*LDSGFK Trigger: TTTAAATCCCGAATCCAAGCAAGAAGTCCCTATGTG...GAACAGGGTCTGCTCTTCCAGATTCCCCTCACCCACACGGTGGCTCACAACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR GCA 90 bp | CAGGAGCAGAAGGAAGCTGAACAAATACAACCATGTTCAAATGCAGGCGAGATAAGGAGGGATCCCAGCTaGACAGCTCTGGAGTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: QEQKEAEQIQPCSNAGEIRRDPS*TALELM Trigger: CATTAACTCCAGAGCTGTGCAGCTGGGATCCCTCCT...TATCTCGCCTGCATTTGAACATGGTTGTATTTGTTCAGCTTCCTTCTGCTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CCA 90 bp | TTCAGACAGTTAGTTGTGAGCCACCGTGTGGGTGAGGGGAATCTGGAAGAGCAGTCTGGGTTTGTATATTaGGAAACTTCTGGCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FRQLVVSHRVGEGNLEEQSGFVY*ETSGLD Trigger: ATCCAAGCCAGAAGTTTCCCAATATACAAACCCAGA...CTGCTCTTCCAGATTCCCCTCACCCACACGGTGGCTCACAACTAACTGTCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CCA 90 bp | CGCAAGGCCTCTCTCTGCACAGCATGGTTGAGCCAGTGGTCTGGAAAACTGTCATTTTTGCTTGCTCTCTaGGTTTGTATATTGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RKASLCTAWLSQWSGKLSFLLAL*VCILGN Trigger: GTTTCCCAATATACAAACCCAGAGAGCAAGCAAAAA...TGACAGTTTTCCAGACCACTGGCTCAACCATGCTGTGCAGAGAGAGGCCTTGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CCA 90 bp | CAGGAGCAGAAGGAAGCTGAACAAATACAACCATGTTCAAATGCAGGCGAGATACAGAATGGCCATGTGTaGAGTCTGTCCTGTAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QEQKEAEQIQPCSNAGEIQNGHV*SLSCRS Trigger: GCTCCTACAGGACAGACTCCACACATGGCCATTCTG...TATCTCGCCTGCATTTGAACATGGTTGTATTTGTTCAGCTTCCTTCTGCTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CCA 90 bp | CCCAAATCAAATGCTCTCTTCTGTAAGTTGCTTTGTTCACAGTGCCTTTTCACACTGCCCCCTGAACCCTaGTTTCTCCATGACTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PKSNALFCKLLCSQCLFTLPPEP*FLHDCP Trigger: TGGGCAGTCATGGAGAAACCAGGGTTCAGGGGGCAG...TGTGAAAAGGCACTGTGAACAAAGCAACTTACAGAAGAGAGCATTTGATTTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR GCA 90 bp | CGCAAGGCCTCTCTCTGCACAGCATGGTTGAGCCAGTGGTCTGGAAAACTGTCAGTTTGTCTGTTATCATaGCTTTGGGTTTTTGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: RKASLCTAWLSQWSGKLSVCLLS*LWVFEL Trigger: TAGTTCAAAAACCCAAAGGCATGATAACAGACAAAC...TGACAGTTTTCCAGACCACTGGCTCAACCATGCTGTGCAGAGAGAGGCCTTGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR GCA 90 bp | CTCTCTCTGCACAGCATGGTTGAGCCAGTGGTCTGGAAAACTGTCAGCGTAAAGATTCTATCTCCCCACTaGTCAGAATGTTGTACACTA | + |
|
Preference number: 4 (lower is better) Translates to: LSLHSMVEPVVWKTVSVKILSPH*SECCTL Trigger: TAGTGTACAACATTCTGAGCAGTGGGGAGATAGAAT...CTTTACGCTGACAGTTTTCCAGACCACTGGCTCAACCATGCTGTGCAGAGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CCA 90 bp | GTCCTGCAGGAGCAGAAGGAAGCTGAACAAATACAACCATGTTCAAATGCAGGCCAGGATCCATACACATaGGAACTTCTTGCATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: VLQEQKEAEQIQPCSNAGQDPYT*ELLAWT Trigger: AGTCCATGCAAGAAGTTCCCATGTGTATGGATCCTG...GCCTGCATTTGAACATGGTTGTATTTGTTCAGCTTCCTTCTGCTCCTGCAGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR GCA 90 bp | GACCAGAAGAGCCAAACTAGGCAGCAAAGTCATGGCAGCTACAAGCTCTGCAGACACACAGGAACTTCTTaGTTGAATTCAGGATCAATA | + |
|
Preference number: 4 (lower is better) Translates to: DQKSQTRQQSHGSYKLCRHTGTS*LNSGSI Trigger: TATTGATCCTGAATTCAAGCAAGAAGTTCCTGTGTG...TCTGCAGAGCTTGTAGCTGCCATGACTTTGCTGCCTAGTTTGGCTCTTCTGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CCA 90 bp | GACCAGAAGAGCCAAACTAGGCAGCAAAGTCATGGCAGCTACAAGCTCTGCAGACTGTTATCATGCCTTTaGGTTTTTGAACTAACCATG | + |
|
Preference number: 4 (lower is better) Translates to: DQKSQTRQQSHGSYKLCRLLSCL*VFELTM Trigger: CATGGTTAGTTCAAAAACCCAAAGGCATGATAACAG...TCTGCAGAGCTTGTAGCTGCCATGACTTTGCTGCCTAGTTTGGCTCTTCTGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CCA 90 bp | GAAGAGGCTTTCGATCCCCTGGAACTGGAGTTTCAGACAGTTAGTTGTGAGCCACAGACTCGGAAACCATaGTTACTTGCTTTATTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EEAFDPLELEFQTVSCEPQTRKP*LLALFQ Trigger: CTGAAATAAAGCAAGTAACCATGGTTTCCGAGTCTG...TGGCTCACAACTAACTGTCTGAAACTCCAGTTCCAGGGGATCGAAAGCCTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAGCAGAAGGAAGCTGAACAAATACAACCATGTTCAAATGCAGGCGAGATAATATTGGGAAACTTCTaGCTTGGATTCGGAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QEQKEAEQIQPCSNAGEIILGNF*LGFGVC Trigger: ACAGACTCCGAATCCAAGCCAGAAGTTTCCCAATAT...TATCTCGCCTGCATTTGAACATGGTTGTATTTGTTCAGCTTCCTTCTGCTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CCA 90 bp | CCCAAATCAAATGCTCTCTTCTGTAAGTTGCTTTGTTCACAGTGCCTTTTCACATGGGAACTTCTTGTTTaGATTCGGGATCTGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PKSNALFCKLLCSQCLFTWELLV*IRDLCT Trigger: TGTGCACAGATCCCGAATCCAAACAAGAAGTTCCCA...TGTGAAAAGGCACTGTGAACAAAGCAACTTACAGAAGAGAGCATTTGATTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
||
| CDS-3UTR CCA 90 bp | GCATTCTCAATGATAGTGTCAAGTGTTCTGGATCATGGAGTCAGGAGCAACCTCTGTAGTGAAAAATCTTaGATATCTCCCGGTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AFSMIVSSVLDHGVRSNLCSEKS*ISPGCF Trigger: AAAACAACCGGGAGATATCCAAGATTTTTCACTACA...GAGGTTGCTCCTGACTCCATGATCCAGAACACTTGACACTATCATTGAGAATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
||
| CDS-3UTR TCA 90 bp | AGTAAGAAAATGTTTGGAGTTAGACTCCTGCTAAGGTCAGGAGAGCATTCTCAAATGCCTTTGGGTTTTTaGACTAACCATGGAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKKMFGVRLLLRSGEHSQMPLGF*TNHGDF Trigger: GAAATCTCCATGGTTAGTTCAAAAACCCAAAGGCAT...TTGAGAATGCTCTCCTGACCTTAGCAGGAGTCTAACTCCAAACATTTTCTTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
||
| CDS-3UTR GCA 90 bp | AGTAAGAAAATGTTTGGAGTTAGACTCCTGCTAAGGTCAGGAGAGCATTCTCAACCTGAAGGTAATTTTTaGTTGCTCTCTGGGTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SKKMFGVRLLLRSGEHSQPEGNF*LLSGFV Trigger: TACAAACCCAGAGAGCAAGCAAAAATTACCTTCAGG...TTGAGAATGCTCTCCTGACCTTAGCAGGAGTCTAACTCCAAACATTTTCTTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
||
| 3UTR CAA 72 bp | ACTCTAAGACCCAAATCAAATGCTCTCTTCTGTAAGTaGCTTTGTTCACAGTGCCTTTTCACAGTAACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLRPKSNALFCK*LCSQCLFTVTG Trigger: TCCTGTTACTGTGAAAAGGCACTGTGAACAAAGCAACTTACAGAAGAGAGCATTTGATTTGGGTCTTAGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
||
| CDS-3UTR TCA 90 bp | AGTAAGAAAATGTTTGGAGTTAGACTCCTGCTAAGGTCAGGAGAGCATTCTCAATGGCTGGTCTCTTTTTaGCTTGATGTAGTGAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKKMFGVRLLLRSGEHSQWLVSF*LDVVKN Trigger: ATTTTTCACTACATCAAGTCAAAAAGAGACCAGCCA...TTGAGAATGCTCTCCTGACCTTAGCAGGAGTCTAACTCCAAACATTTTCTTACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
||
| CDS GCA 90 bp | CCTGTCTCCCTTGCCTCCCTGTGTAAGGAGAGTCCCAATGCGTTCTaGCTACGATGCGCCGGTTCTCCTTGGAGCAGGCCTTGCAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: PVSLASLCKESPNAF*LRCAGSPWSRPCRP Trigger: TGGTCTGCAAGGCCTGCTCCAAGGAGAACCGGCGCATCGTAGGCAGAACGCATTGGGACTCTCCTTACACAGGGAGGCAAGGGAGACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS TCA 90 bp | GGTCTGGGTGCTTCAGGGAGTTACCGGGGTACACAAACCACTCCTTaGCCACTGGGCCAGTGCTGGCTCCATCTTTCCAGTCCCCGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GLGASGSYRGTQTTP*PLGQCWLHLSSPRV Trigger: TACTCGGGGACTGGAAAGATGGAGCCAGCACTGGCCCAGTGGTCAAGGAGTGGTTTGTGTACCCCGGTAACTCCCTGAAGCACCCAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS TCA 90 bp | ACGGGCTCTCAACTGCTTGCAGCTCTTCTCTTGAGGAGGAAAGGTTaGAGCAGGCTAGCAAGGTGTCCAGGCGCTGGGCCTGCACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TGSQLLAALLLRRKG*SRLARCPGAGPALL Trigger: CAGCAGTGCAGGCCCAGCGCCTGGACACCTTGCTAGCCTGCTTCAACCTTTCCTCCTCAAGAGAAGAGCTGCAAGCAGTTGAGAGCCCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS GCA 90 bp | GAGGAAAGGTTGAAGCAGGCTAGCAAGGTGTCCAGGCGCTGGGCCTaGACTGCTGGCTCTTGGCTCAGCCACAGAACTTCCAAGCTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EERLKQASKVSRRWA*TAGSWLSHRTSKLG Trigger: ACCTAGCTTGGAAGTTCTGTGGCTGAGCCAAGAGCCAGCAGTGCAGGCCCAGCGCCTGGACACCTTGCTAGCCTGCTTCAACCTTTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS GCA 90 bp | CTTGCCTCCCTGTGTAAGGAGAGTCCCAATGCGTTCTGCCTACGATaGGCCGGTTCTCCTTGGAGCAGGCCTTGCAGACCACTGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LASLCKESPNAFCLR*AGSPWSRPCRPLPS Trigger: TGAAGGCAGTGGTCTGCAAGGCCTGCTCCAAGGAGAACCGGCGCATCGTAGGCAGAACGCATTGGGACTCTCCTTACACAGGGAGGCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CCA 90 bp | CTTGAGGAGGAAAGGTTGAAGCAGGCTAGCAAGGTGTCCAGGCGCTaGGCCTGCACTGCTGGCTCTTGGCTCAGCCACAGAACTTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LEEERLKQASKVSRR*ACTAGSWLSHRTSK Trigger: CTTGGAAGTTCTGTGGCTGAGCCAAGAGCCAGCAGTGCAGGCCCAGCGCCTGGACACCTTGCTAGCCTGCTTCAACCTTTCCTCCTCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS GCA 90 bp | TGGAGTGATGTCATTGCCAAGCAGACAGGCCAGAAGAGGAAGGTCTaGCACACGGAGGCCCAGGCTCTCACAGAGCTTCTCTCGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: WSDVIAKQTGQKRKV*HTEAQALTELLSTE Trigger: CTCTGTCGAGAGAAGCTCTGTGAGAGCCTGGGCCTCCGTGTGGCAGACCTTCCTCTTCTGGCCTGTCTGCTTGGCAATGACATCACTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CCA 90 bp | AAGGAGAGTCCCAATGCGTTCTGCCTACGATGCGCCGGTTCTCCTTaGAGCAGGCCTTGCAGACCACTGCCTTCAGGTTGTGGAACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KESPNAFCLRCAGSP*SRPCRPLPSGCGTW Trigger: CCAAGTTCCACAACCTGAAGGCAGTGGTCTGCAAGGCCTGCTCCAAGGAGAACCGGCGCATCGTAGGCAGAACGCATTGGGACTCTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | TGTGTGTCTGCCTCTCACAGAGGCCAGAAGAGGCTTTCGATCCCCTGGAACTGGTACACAAACCACTCCTaGACCACTGGGCCAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CVSASHRGQKRLSIPWNWYTNHS*TTGPVL Trigger: CAGCACTGGCCCAGTGGTCAAGGAGTGGTTTGTGTA...CCAGTTCCAGGGGATCGAAAGCCTCTTCTGGCCTCTGTGAGAGGCAGACACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | TTCAGACAGTTAGTTGTGAGCCACCGTGTGGGTGAGGGGAATCTGGAAGAGCAGGCTAGGTGTTCCCCCTaGAACGGTCATCTGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FRQLVVSHRVGEGNLEEQARCSP*NGHLQR Trigger: CCTCTGCAGATGACCGTTCAAGGGGGAACACCTAGC...CTGCTCTTCCAGATTCCCCTCACCCACACGGTGGCTCACAACTAACTGTCTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | GACCAGAAGAGCCAAACTAGGCAGCAAAGTCATGGCAGCTACAAGCTCTGCAGATCCTTGGAGCAGGCCTaGCAGACCACTGCCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DQKSQTRQQSHGSYKLCRSLEQA*QTTAFR Trigger: CCTGAAGGCAGTGGTCTGCAAGGCCTGCTCCAAGGA...TCTGCAGAGCTTGTAGCTGCCATGACTTTGCTGCCTAGTTTGGCTCTTCTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS GCA 90 bp | CTTGGCTCGGGAGGGCTTGGTCCAGCTCATCCTCCAGGGTGTTACTaGATTCTATCTCCCCACTGCTCAGAATGTTGTACACTAGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGSGGLGPAHPPGCY*ILSPHCSECCTLGS Trigger: GCTACCTAGTGTACAACATTCTGAGCAGTGGGGAGATAGAATGCAGTAACACCCTGGAGGATGAGCTGGACCAAGCCCTCCCGAGCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CCA 90 bp | TATCTTCTCCAGTGGTTACGCTCATGCTGTCTGCCCCCTGAACCCTaGTTTCTCCATGACTGCCCAGAATGGCCATGTGTGGAGTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: YLLQWLRSCCLPPEP*FLHDCPEWPCVESV Trigger: GACAGACTCCACACATGGCCATTCTGGGCAGTCATGGAGAAACCAGGGTTCAGGGGGCAGACAGCATGAGCGTAACCACTGGAGAAGATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | TTAGTTGTGAGCCACCGTGTGGGTGAGGGGAATCTGGAAGAGCAGACCCTGTTCTGGGAAACTTCTGGCTaGGATTCGGAGTCTGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LVVSHRVGEGNLEEQTLFWETSG*DSESVH Trigger: GTGCACAGACTCCGAATCCAAGCCAGAAGTTTCCCA...GAACAGGGTCTGCTCTTCCAGATTCCCCTCACCCACACGGTGGCTCACAACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS TCA 90 bp | CCACACGGAGGCCCAGGCTCTCACAGAGCTTCTCTCGACAGAGCATaGTGGTTTGGAGACTCTCTAGGCAGAGATCGCCAATTGAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PHGGPGSHRASLDRA*WFGDSLGRDRQLKS Trigger: ACTTTTCAATTGGCGATCTCTGCCTAGAGAGTCTCCAAACCATCATGCTCTGTCGAGAGAAGCTCTGTGAGAGCCTGGGCCTCCGTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | TTCAGACAGTTAGTTGTGAGCCACCGTGTGGGTGAGGGGAATCTGGAAGAGCAGTCTGGAGTGATGTCATaGCCAAGCAGACAGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FRQLVVSHRVGEGNLEEQSGVMS*PSRQAR Trigger: TCTGGCCTGTCTGCTTGGCAATGACATCACTCCAGA...CTGCTCTTCCAGATTCCCCTCACCCACACGGTGGCTCACAACTAACTGTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | AGGAGGAGTGGCCTTACTGGAGGAGGTGTGGCTTTGCTGATGGAGGTGTGTCACAAGCCACATGCGCTATaGACTAGTACCAATGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RRSGLTGGGVALLMEVCHKPHAL*TSTNVV Trigger: CACCACATTGGTACTAGTCAATAGCGCATGTGGCTT...GTGACACACCTCCATCAGCAAAGCCACACCTCCTCCAGTAAGGCCACTCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS TCA 90 bp | GCGTCCACCACGATGGTAGGCGTACATCCAGGGTACTTGTTTCGGTaGCGCTCTGCCAGCTCGTGGATATTGACTATGGTACATATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ASTTMVGVHPGYLFR*RSASSWILTMVHMC Trigger: ACACATATGTACCATAGTCAATATCCACGAGCTGGCAGAGCGTCACCGAAACAAGTACCCTGGATGTACGCCTACCATCGTGGTGGACGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS GCA 90 bp | CACGATGGTAGGCGTACATCCAGGGTACTTGTTTCGGTGACGCTCTaGCAGCTCGTGGATATTGACTATGGTACATATGTGTGGGCACGT | + |
|
Preference number: 5 (lower is better) Translates to: HDGRRTSRVLVSVTL*QLVDIDYGTYVWAR Trigger: ACGTGCCCACACATATGTACCATAGTCAATATCCACGAGCTGGCAGAGCGTCACCGAAACAAGTACCCTGGATGTACGCCTACCATCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | CAAGAATCTCAAGGAGAAACGCAAGGCCTCTCTCTGCACAGCATGGTTGAGCCAATGGAAGCTTCCTGGTaGGGCTCAGGATCCATACAC | + |
|
Preference number: 5 (lower is better) Translates to: QESQGETQGLSLHSMVEPMEASW*GSGSIH Trigger: GTGTATGGATCCTGAGCCCAACCAGGAAGCTTCCAT...TGGCTCAACCATGCTGTGCAGAGAGAGGCCTTGCGTTTCTCCTTGAGATTCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | CAGGAGCAGAAGGAAGCTGAACAAATACAACCATGTTCAAATGCAGGCGAGATAATGCGCCGGTTCTCCTaGGAGCAGGCCTTGCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: QEQKEAEQIQPCSNAGEIMRRFS*EQALQT Trigger: GGTCTGCAAGGCCTGCTCCAAGGAGAACCGGCGCAT...TATCTCGCCTGCATTTGAACATGGTTGTATTTGTTCAGCTTCCTTCTGCTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS TCA 90 bp | AAGTGCATGAGCTGGGAGGTTGATTTTCCTTGGAGGCACAAGGCCTaGGCGATAAATGCATGCAGATCTTCCAGGGAAAGAGTGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: KCMSWEVDFPWRHKA*AINACRSSRERVST Trigger: GGTGGACACTCTTTCCCTGGAAGATCTGCATGCATTTATCGCTCAGGCCTTGTGCCTCCAAGGAAAATCAACCTCCCAGCTCATGCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CCA 90 bp | CGGTTCTCCTTGGAGCAGGCCTTGCAGACCACTGCCTTCAGGTTGTaGAACTTGGTGAGCCACGATCTATTTTGTTCCAAAAGAACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RFSLEQALQTTAFRL*NLVSHDLFCSKRTS Trigger: GGAAGTTCTTTTGGAACAAAATAGATCGTGGCTCACCAAGTTCCACAACCTGAAGGCAGTGGTCTGCAAGGCCTGCTCCAAGGAGAACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | CAAGAATCTCAAGGAGAAACGCAAGGCCTCTCTCTGCACAGCATGGTTGAGCCAGGCAGAGATCGCCAATaGAAAAGTAGGGGCAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QESQGETQGLSLHSMVEPGRDRQ*KSRGKC Trigger: ACACTTGCCCCTACTTTTCAATTGGCGATCTCTGCC...TGGCTCAACCATGCTGTGCAGAGAGAGGCCTTGCGTTTCTCCTTGAGATTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | TTAGTTGTGAGCCACCGTGTGGGTGAGGGGAATCTGGAAGAGCAGACCCTGTTCCTCTGGGTTTGTATATaGGGAAACTTCTGGCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LVVSHRVGEGNLEEQTLFLWVCI*GNFWLG Trigger: TCCAAGCCAGAAGTTTCCCAATATACAAACCCAGAG...GAACAGGGTCTGCTCTTCCAGATTCCCCTCACCCACACGGTGGCTCACAACTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | GAAGAGGCTTTCGATCCCCTGGAACTGGAGTTTCAGACAGTTAGTTGTGAGCCACTTGAGGAGGAAAGGTaGAAGCAGGCTAGCAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EEAFDPLELEFQTVSCEPLEEER*KQASKV Trigger: CACCTTGCTAGCCTGCTTCAACCTTTCCTCCTCAAG...TGGCTCACAACTAACTGTCTGAAACTCCAGTTCCAGGGGATCGAAAGCCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS TCA 90 bp | TGGAGCAGGCCTTGCAGACCACTGCCTTCAGGTTGTGGAACTTGGTaGGCCACGATCTATTTTGTTCCAAAAGAACTTCCACGGCATATC | + |
|
Preference number: 5 (lower is better) Translates to: WSRPCRPLPSGCGTW*ATIYFVPKELPRHI Trigger: GATATGCCGTGGAAGTTCTTTTGGAACAAAATAGATCGTGGCTCACCAAGTTCCACAACCTGAAGGCAGTGGTCTGCAAGGCCTGCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS GCA 90 bp | GGTCCAGCTCATCCTCCAGGGTGTTACTGCATTCTATCTCCCCACTaGTCAGAATGTTGTACACTAGGTAGCTTTCTGAGTGGACGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GPAHPPGCYCILSPH*SECCTLGSFLSGRD Trigger: ATCACGTCCACTCAGAAAGCTACCTAGTGTACAACATTCTGAGCAGTGGGGAGATAGAATGCAGTAACACCCTGGAGGATGAGCTGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | CGCAAGGCCTCTCTCTGCACAGCATGGTTGAGCCAGTGGTCTGGAAAACTGTCATTGGATATCTCCCGGTaGTTTTTGAGTCTACGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RKASLCTAWLSQWSGKLSLDISR*FLSLRF Trigger: AAAGCGTAGACTCAAAAACAACCGGGAGATATCCAA...TGACAGTTTTCCAGACCACTGGCTCAACCATGCTGTGCAGAGAGAGGCCTTGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | CTTGTTGCTGAGACCGGAGGGCAGAGTCTGGACATTGATCCTGTTTCCACACTCGCTTGCTCTCTGGGTTaGTATATTGGGAAACTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVAETGGQSLDIDPVSTLACSLG*YIGKLL Trigger: CAGAAGTTTCCCAATATACAAACCCAGAGAGCAAGC...GAGTGTGGAAACAGGATCAATGTCCAGACTCTGCCCTCCGGTCTCAGCAACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | CAGGAGCAGAAGGAAGCTGAACAAATACAACCATGTTCAAATGCAGGCGAGATACTGCACTGCTGGCTCTaGGCTCAGCCACAGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: QEQKEAEQIQPCSNAGEILHCWL*AQPQNF Trigger: GAAGTTCTGTGGCTGAGCCAAGAGCCAGCAGTGCAG...TATCTCGCCTGCATTTGAACATGGTTGTATTTGTTCAGCTTCCTTCTGCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | CAGGAGCAGAAGGAAGCTGAACAAATACAACCATGTTCAAATGCAGGCGAGATAGTAGCCCTGTCTCCCTaGCCTCCCTGTGTAAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QEQKEAEQIQPCSNAGEIVALSP*PPCVRR Trigger: TCTCCTTACACAGGGAGGCAAGGGAGACAGGGCTAC...TATCTCGCCTGCATTTGAACATGGTTGTATTTGTTCAGCTTCCTTCTGCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS TCA 90 bp | ATGACAAGCACTTGTACCGAAAGCTTTCAAACATGCTCTCTGGAGTaGTGTCATTGCCAAGCAGACAGGCCAGAAGAGGAAGGTCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: MTSTCTESFQTCSLE*CHCQADRPEEEGLP Trigger: TGGCAGACCTTCCTCTTCTGGCCTGTCTGCTTGGCAATGACATCACTCCAGAGAGCATGTTTGAAAGCTTTCGGTACAAGTGCTTGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | CGCAAGGCCTCTCTCTGCACAGCATGGTTGAGCCAGTGGTCTGGAAAACTGTCAACAGGAACTTCTTGCTaGAATTCAGGATCAATACAC | + |
|
Preference number: 5 (lower is better) Translates to: RKASLCTAWLSQWSGKLSTGTSC*NSGSIH Trigger: GTGTATTGATCCTGAATTCAAGCAAGAAGTTCCTGT...TGACAGTTTTCCAGACCACTGGCTCAACCATGCTGTGCAGAGAGAGGCCTTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | CTCTCTCTGCACAGCATGGTTGAGCCAGTGGTCTGGAAAACTGTCAGCGTAAAGTTCAGGTTGTGGAACTaGGTGAGCCACGATCTATTT | + |
|
Preference number: 5 (lower is better) Translates to: LSLHSMVEPVVWKTVSVKFRLWN*VSHDLF Trigger: AAATAGATCGTGGCTCACCAAGTTCCACAACCTGAA...CTTTACGCTGACAGTTTTCCAGACCACTGGCTCAACCATGCTGTGCAGAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | CAGGAGCAGAAGGAAGCTGAACAAATACAACCATGTTCAAATGCAGGCGAGATAACCACTGCCTTCAGGTaGTGGAACTTGGTGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QEQKEAEQIQPCSNAGEITTAFR*WNLVSH Trigger: GTGGCTCACCAAGTTCCACAACCTGAAGGCAGTGGT...TATCTCGCCTGCATTTGAACATGGTTGTATTTGTTCAGCTTCCTTCTGCTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | GACCAGAAGAGCCAAACTAGGCAGCAAAGTCATGGCAGCTACAAGCTCTGCAGAGGAAACCATGGTTACTaGCTTTATTTCAGGTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: DQKSQTRQQSHGSYKLCRGNHGY*LYFRFH Trigger: ATGGAACCTGAAATAAAGCAAGTAACCATGGTTTCC...TCTGCAGAGCTTGTAGCTGCCATGACTTTGCTGCCTAGTTTGGCTCTTCTGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | GCATTCTCAATGATAGTGTCAAGTGTTCTGGATCATGGAGTCAGGAGCAACCTCCTCACCATTTGCTGTTaGTCTGTTATCATGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: AFSMIVSSVLDHGVRSNLLTICC*SVIMPL Trigger: CAAAGGCATGATAACAGACAAACAGCAAATGGTGAG...GAGGTTGCTCCTGACTCCATGATCCAGAACACTTGACACTATCATTGAGAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | CCCAAATCAAATGCTCTCTTCTGTAAGTTGCTTTGTTCACAGTGCCTTTTCACAAAAAGAGAGCTTTGTTaGGCCCCAAGGGTAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: PKSNALFCKLLCSQCLFTKRELC*APRVAS Trigger: AGATGCTACCCTTGGGGCCAAACAAAGCTCTCTTTT...TGTGAAAAGGCACTGTGAACAAAGCAACTTACAGAAGAGAGCATTTGATTTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | AGTAAGAAAATGTTTGGAGTTAGACTCCTGCTAAGGTCAGGAGAGCATTCTCAAGCACACAGGAACTTCTaGCTTGAATTCAGGATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SKKMFGVRLLLRSGEHSQAHRNF*LEFRIN Trigger: ATTGATCCTGAATTCAAGCAAGAAGTTCCTGTGTGC...TTGAGAATGCTCTCCTGACCTTAGCAGGAGTCTAACTCCAAACATTTTCTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS-3UTR CAA 90 bp | CAGGAGCAGAAGGAAGCTGAACAAATACAACCATGTTCAAATGCAGGCGAGATAATCCATGACATCTTCTaGTTTAAATTCAGGGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QEQKEAEQIQPCSNAGEIIHDIF*FKFRVC Trigger: ACACACCCTGAATTTAAACAAGAAGATGTCATGGAT...TATCTCGCCTGCATTTGAACATGGTTGTATTTGTTCAGCTTCCTTCTGCTCCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS GCA 90 bp | AGTGCTTCTAGGTTAAATTCAGTGTCTATTCCTGAAGGTAATTTTTaGTTGCTCTCTGGGTTTGTATATTGGGAAACTTCTGGCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SASRLNSVSIPEGNF*LLSGFVYWETSGLD Trigger: ATCCAAGCCAGAAGTTTCCCAATATACAAACCCAGAGAGCAAGCAAAAATTACCTTCAGGAATAGACACTGAATTTAACCTAGAAGCACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS GCA 90 bp | ATCCTGGCAACCTTTAAGATCTCAGACTCGGAAACCATGGTTACTTaGTTTATTTCAGGTTCCATATCCATGACATCTTCTTGTTTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: ILATFKISDSETMVT*FISGSISMTSSCLN Trigger: ATTTAAACAAGAAGATGTCATGGATATGGAACCTGAAATAAAGCAAGTAACCATGGTTTCCGAGTCTGAGATCTTAAAGGTTGCCAGGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
||
| CDS GCA 72 bp | TTGAAGCAGGCTAGCAAGGTGTCCAGGCGCTGGGCCTaGACTGCTGGCTCTTGGCTCAGCCACAGAACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LKQASKVSRRWA*TAGSWLSHRTS Trigger: GGAAGTTCTGTGGCTGAGCCAAGAGCCAGCAGTGCAGGCCCAGCGCCTGGACACCTTGCTAGCCTGCTTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
||
| CDS CCA 72 bp | GGAGTTACCGGGGTACACAAACCACTCCTTGACCACTaGGCCAGTGCTGGCTCCATCTTTCCAGTCCCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: GVTGVHKPLLDH*ASAGSIFPVPE Trigger: CTCGGGGACTGGAAAGATGGAGCCAGCACTGGCCCAGTGGTCAAGGAGTGGTTTGTGTACCCCGGTAACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
||
| CDS CCA 72 bp | CCCAATGCGTTCTGCCTACGATGCGCCGGTTCTCCTTaGAGCAGGCCTTGCAGACCACTGCCTTCAGGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PNAFCLRCAGSP*SRPCRPLPSGC Trigger: ACAACCTGAAGGCAGTGGTCTGCAAGGCCTGCTCCAAGGAGAACCGGCGCATCGTAGGCAGAACGCATTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CAA 72 bp | CTGCCTACGATGCGCCGGTTCTCCTTGGAGCAGGCCTaGCAGACCACTGCCTTCAGGTTGTGGAACTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LPTMRRFSLEQA*QTTAFRLWNLV Trigger: CACCAAGTTCCACAACCTGAAGGCAGTGGTCTGCAAGGCCTGCTCCAAGGAGAACCGGCGCATCGTAGGCAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CAA 72 bp | TCCCAATGCGTTCTGCCTACGATGCGCCGGTTCTCCTaGGAGCAGGCCTTGCAGACCACTGCCTTCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: SQCVLPTMRRFS*EQALQTTAFRL Trigger: CAACCTGAAGGCAGTGGTCTGCAAGGCCTGCTCCAAGGAGAACCGGCGCATCGTAGGCAGAACGCATTGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CAA 90 bp | AGGTCTGGGTGCTTCAGGGAGTTACCGGGGTACACAAACCACTCCTaGACCACTGGGCCAGTGCTGGCTCCATCTTTCCAGTCCCCGAGT | + |
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Preference number: 6 (lower is better) Translates to: RSGCFRELPGYTNHS*TTGPVLAPSFQSPS Trigger: ACTCGGGGACTGGAAAGATGGAGCCAGCACTGGCCCAGTGGTCAAGGAGTGGTTTGTGTACCCCGGTAACTCCCTGAAGCACCCAGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CAA 90 bp | CAATGCGTTCTGCCTACGATGCGCCGGTTCTCCTTGGAGCAGGCCTaGCAGACCACTGCCTTCAGGTTGTGGAACTTGGTGAGCCACGAT | + |
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Preference number: 6 (lower is better) Translates to: QCVLPTMRRFSLEQA*QTTAFRLWNLVSHD Trigger: ATCGTGGCTCACCAAGTTCCACAACCTGAAGGCAGTGGTCTGCAAGGCCTGCTCCAAGGAGAACCGGCGCATCGTAGGCAGAACGCATTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS GCA 72 bp | CTGTGTAAGGAGAGTCCCAATGCGTTCTGCCTACGATaGGCCGGTTCTCCTTGGAGCAGGCCTTGCAGACCA | + |
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Preference number: 6 (lower is better) Translates to: LCKESPNAFCLR*AGSPWSRPCRP Trigger: TGGTCTGCAAGGCCTGCTCCAAGGAGAACCGGCGCATCGTAGGCAGAACGCATTGGGACTCTCCTTACACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS TCA 72 bp | GCTTCAGGGAGTTACCGGGGTACACAAACCACTCCTTaGCCACTGGGCCAGTGCTGGCTCCATCTTTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: ASGSYRGTQTTP*PLGQCWLHLSS Trigger: ACTGGAAAGATGGAGCCAGCACTGGCCCAGTGGTCAAGGAGTGGTTTGTGTACCCCGGTAACTCCCTGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS TCA 72 bp | CAACTGCTTGCAGCTCTTCTCTTGAGGAGGAAAGGTTaGAGCAGGCTAGCAAGGTGTCCAGGCGCTGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: QLLAALLLRRKG*SRLARCPGAGP Trigger: AGGCCCAGCGCCTGGACACCTTGCTAGCCTGCTTCAACCTTTCCTCCTCAAGAGAAGAGCTGCAAGCAGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CCA 72 bp | CCTGGTTTCTCCATGACTGCCCAGAATGGCCATGTGTaGAGTCTGTCCTGTAGGAGCTGTAGCCCTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PGFSMTAQNGHV*SLSCRSCSPVS Trigger: GGAGACAGGGCTACAGCTCCTACAGGACAGACTCCACACATGGCCATTCTGGGCAGTCATGGAGAAACCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CCA 72 bp | CAGTGGTTACGCTCATGCTGTCTGCCCCCTGAACCCTaGTTTCTCCATGACTGCCCAGAATGGCCATGTGTG | + |
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Preference number: 6 (lower is better) Translates to: QWLRSCCLPPEP*FLHDCPEWPCV Trigger: CACACATGGCCATTCTGGGCAGTCATGGAGAAACCAGGGTTCAGGGGGCAGACAGCATGAGCGTAACCACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CAA 72 bp | TGCTTCAGGGAGTTACCGGGGTACACAAACCACTCCTaGACCACTGGGCCAGTGCTGGCTCCATCTTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: CFRELPGYTNHS*TTGPVLAPSFQ Trigger: CTGGAAAGATGGAGCCAGCACTGGCCCAGTGGTCAAGGAGTGGTTTGTGTACCCCGGTAACTCCCTGAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CAA 72 bp | GGAGTCTGTCCTGTAGGAGCTGTAGCCCTGTCTCCCTaGCCTCCCTGTGTAAGGAGAGTCCCAATGCGTTCT | + |
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Preference number: 6 (lower is better) Translates to: GVCPVGAVALSP*PPCVRRVPMRS Trigger: AGAACGCATTGGGACTCTCCTTACACAGGGAGGCAAGGGAGACAGGGCTACAGCTCCTACAGGACAGACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CAA 90 bp | CAGGGCATAAACTCACTTGTTGTCCAGGGGAAGCCACATGCGCTATaGACTAGTACCAATGTGGTGAGGCCACGGACGAGGAGGGATCCC | + |
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Preference number: 6 (lower is better) Translates to: QGINSLVVQGKPHAL*TSTNVVRPRTRRDP Trigger: GGGATCCCTCCTCGTCCGTGGCCTCACCACATTGGTACTAGTCAATAGCGCATGTGGCTTCCCCTGGACAACAAGTGAGTTTATGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS TCA 72 bp | GGCCCAGGCTCTCACAGAGCTTCTCTCGACAGAGCATaGTGGTTTGGAGACTCTCTAGGCAGAGATCGCCAA | + |
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Preference number: 6 (lower is better) Translates to: GPGSHRASLDRA*WFGDSLGRDRQ Trigger: TTGGCGATCTCTGCCTAGAGAGTCTCCAAACCATCATGCTCTGTCGAGAGAAGCTCTGTGAGAGCCTGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CAA 72 bp | AACTCACTTGTTGTCCAGGGGAAGCCACATGCGCTATaGACTAGTACCAATGTGGTGAGGCCACGGACGAGG | + |
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Preference number: 6 (lower is better) Translates to: NSLVVQGKPHAL*TSTNVVRPRTR Trigger: CCTCGTCCGTGGCCTCACCACATTGGTACTAGTCAATAGCGCATGTGGCTTCCCCTGGACAACAAGTGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS GCA 72 bp | GGAGGGCTTGGTCCAGCTCATCCTCCAGGGTGTTACTaGATTCTATCTCCCCACTGCTCAGAATGTTGTACA | + |
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Preference number: 6 (lower is better) Translates to: GGLGPAHPPGCY*ILSPHCSECCT Trigger: TGTACAACATTCTGAGCAGTGGGGAGATAGAATGCAGTAACACCCTGGAGGATGAGCTGGACCAAGCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CAA 72 bp | TCCTTGGAGCAGGCCTTGCAGACCACTGCCTTCAGGTaGTGGAACTTGGTGAGCCACGATCTATTTTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SLEQALQTTAFR*WNLVSHDLFCS Trigger: GGAACAAAATAGATCGTGGCTCACCAAGTTCCACAACCTGAAGGCAGTGGTCTGCAAGGCCTGCTCCAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CAA 90 bp | CGCCGGTTCTCCTTGGAGCAGGCCTTGCAGACCACTGCCTTCAGGTaGTGGAACTTGGTGAGCCACGATCTATTTTGTTCCAAAAGAACT | + |
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Preference number: 6 (lower is better) Translates to: RRFSLEQALQTTAFR*WNLVSHDLFCSKRT Trigger: AGTTCTTTTGGAACAAAATAGATCGTGGCTCACCAAGTTCCACAACCTGAAGGCAGTGGTCTGCAAGGCCTGCTCCAAGGAGAACCGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS TCA 72 bp | ACGATGGTAGGCGTACATCCAGGGTACTTGTTTCGGTaGCGCTCTGCCAGCTCGTGGATATTGACTATGGTA | + |
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Preference number: 6 (lower is better) Translates to: TMVGVHPGYLFR*RSASSWILTMV Trigger: TACCATAGTCAATATCCACGAGCTGGCAGAGCGTCACCGAAACAAGTACCCTGGATGTACGCCTACCATCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CCA 72 bp | TGCCAGCTCGTGGATATTGACTATGGTACATATGTGTaGGCACGTACTCCCCACAAACCCCTGCAAACCTCT | + |
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Preference number: 6 (lower is better) Translates to: CQLVDIDYGTYV*ARTPHKPLQTS Trigger: AGAGGTTTGCAGGGGTTTGTGGGGAGTACGTGCCCACACATATGTACCATAGTCAATATCCACGAGCTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS TCA 72 bp | AGCTGGGAGGTTGATTTTCCTTGGAGGCACAAGGCCTaGGCGATAAATGCATGCAGATCTTCCAGGGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SWEVDFPWRHKA*AINACRSSRER Trigger: TCTTTCCCTGGAAGATCTGCATGCATTTATCGCTCAGGCCTTGTGCCTCCAAGGAAAATCAACCTCCCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS GCA 72 bp | AGGCGTACATCCAGGGTACTTGTTTCGGTGACGCTCTaGCAGCTCGTGGATATTGACTATGGTACATATGTG | + |
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Preference number: 6 (lower is better) Translates to: RRTSRVLVSVTL*QLVDIDYGTYV Trigger: CACATATGTACCATAGTCAATATCCACGAGCTGGCAGAGCGTCACCGAAACAAGTACCCTGGATGTACGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CCA 72 bp | TTGGAGCAGGCCTTGCAGACCACTGCCTTCAGGTTGTaGAACTTGGTGAGCCACGATCTATTTTGTTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: LEQALQTTAFRL*NLVSHDLFCSK Trigger: TTTGGAACAAAATAGATCGTGGCTCACCAAGTTCCACAACCTGAAGGCAGTGGTCTGCAAGGCCTGCTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CAA 90 bp | TCTCGCTTCCCCGGCTCCACCATGCCATCAAAGAAGAATATCAACTaGATGCCGGCAGAGGTGAAGGCTGCAACAAAATTTCTCAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: SRFPGSTMPSKKNIN*MPAEVKAATKFLKA Trigger: TGCTTTGAGAAATTTTGTTGCAGCCTTCACCTCTGCCGGCATCAAGTTGATATTCTTCTTTGATGGCATGGTGGAGCCGGGGAAGCGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS TCA 72 bp | TCCACGGCATATCCCTTTTCAGACTGCAGGTACTTCTaGTGGAAAAGCTTGCCATCAAACACATTCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: STAYPFSDCRYF*WKSLPSNTFQG Trigger: GCCCTGGAATGTGTTTGATGGCAAGCTTTTCCATCAGAAGTACCTGCAGTCTGAAAAGGGATATGCCGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CCA 72 bp | CTCTCACAGAGCTTCTCTCGACAGAGCATGATGGTTTaGAGACTCTCTAGGCAGAGATCGCCAATTGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: LSQSFSRQSMMV*RLSRQRSPIEK Trigger: CTTTTCAATTGGCGATCTCTGCCTAGAGAGTCTCCAAACCATCATGCTCTGTCGAGAGAAGCTCTGTGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS TCA 72 bp | ACTTGTACCGAAAGCTTTCAAACATGCTCTCTGGAGTaGTGTCATTGCCAAGCAGACAGGCCAGAAGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: TCTESFQTCSLE*CHCQADRPEEE Trigger: TTCCTCTTCTGGCCTGTCTGCTTGGCAATGACATCACTCCAGAGAGCATGTTTGAAAGCTTTCGGTACAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS TCA 72 bp | CCTTGCAGACCACTGCCTTCAGGTTGTGGAACTTGGTaGGCCACGATCTATTTTGTTCCAAAAGAACTTCCA | + |
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Preference number: 6 (lower is better) Translates to: PCRPLPSGCGTW*ATIYFVPKELP Trigger: TGGAAGTTCTTTTGGAACAAAATAGATCGTGGCTCACCAAGTTCCACAACCTGAAGGCAGTGGTCTGCAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS GCA 72 bp | CATCCTCCAGGGTGTTACTGCATTCTATCTCCCCACTaGTCAGAATGTTGTACACTAGGTAGCTTTCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: HPPGCYCILSPH*SECCTLGSFLS Trigger: ACTCAGAAAGCTACCTAGTGTACAACATTCTGAGCAGTGGGGAGATAGAATGCAGTAACACCCTGGAGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CAA 72 bp | TTGCATGGACTCGGGATTAGTGCACACAGGAACTTCTaGCTTGAATTCAGGATCAATACACATAGGGACTTC | + |
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Preference number: 6 (lower is better) Translates to: LHGLGISAHRNF*LEFRINTHRDF Trigger: GAAGTCCCTATGTGTATTGATCCTGAATTCAAGCAAGAAGTTCCTGTGTGCACTAATCCCGAGTCCATGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CAA 72 bp | CTTCAGGTTGTGGAACTTGGTGAGCCACGATCTATTTaGTTCCAAAAGAACTTCCACGGCATATCCCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: LQVVELGEPRSI*FQKNFHGISLF Trigger: GAAAAGGGATATGCCGTGGAAGTTCTTTTGGAACAAAATAGATCGTGGCTCACCAAGTTCCACAACCTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CAA 90 bp | ATTCAGTGTCTATTCCTGAAGGTAATTTTTGCTTGCTCTCTGGGTTaGTATATTGGGAAACTTCTGGCTTGGATTCGGAGTCTGTGCACA | + |
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Preference number: 6 (lower is better) Translates to: IQCLFLKVIFACSLG*YIGKLLAWIRSLCT Trigger: TGTGCACAGACTCCGAATCCAAGCCAGAAGTTTCCCAATATACAAACCCAGAGAGCAAGCAAAAATTACCTTCAGGAATAGACACTGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CAA 72 bp | CTATTCCTGAAGGTAATTTTTGCTTGCTCTCTGGGTTaGTATATTGGGAAACTTCTGGCTTGGATTCGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LFLKVIFACSLG*YIGKLLAWIRS Trigger: ACTCCGAATCCAAGCCAGAAGTTTCCCAATATACAAACCCAGAGAGCAAGCAAAAATTACCTTCAGGAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CAA 90 bp | GCTTCTAGGTTAAATTCAGTGTCTATTCCTGAAGGTAATTTTTGCTaGCTCTCTGGGTTTGTATATTGGGAAACTTCTGGCTTGGATTCG | + |
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Preference number: 6 (lower is better) Translates to: ASRLNSVSIPEGNFC*LSGFVYWETSGLDS Trigger: CGAATCCAAGCCAGAAGTTTCCCAATATACAAACCCAGAGAGCAAGCAAAAATTACCTTCAGGAATAGACACTGAATTTAACCTAGAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS TCA 72 bp | ATTTGCTGTTTGTCTGTTATCATGCCTTTGGGTTTTTaGACTAACCATGGAGATTTCTGCCCTGGCAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: ICCLSVIMPLGF*TNHGDFCPGKR Trigger: TCTTTTGCCAGGGCAGAAATCTCCATGGTTAGTTCAAAAACCCAAAGGCATGATAACAGACAAACAGCAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CAA 72 bp | GATATGAGGTTACTCCTTTATAAAAGAGAGCTTTGTTaGGCCCCAAGGGTAGCATCTCTTCTATCTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: DMRLLLYKRELC*APRVASLLSSS Trigger: AGAAGAAGATAGAAGAGATGCTACCCTTGGGGCCAAACAAAGCTCTCTTTTATAAAGGAGTAACCTCATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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| CDS CAA 72 bp | TTGCTTTATTTCAGGTTCCATATCCATGACATCTTCTaGTTTAAATTCAGGGTGTGTACACATGAGTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LLYFRFHIHDIF*FKFRVCTHECF Trigger: GAAGCACTCATGTGTACACACCCTGAATTTAAACAAGAAGATGTCATGGATATGGAACCTGAAATAAAGCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055352.8 |
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