Pregenerated sensors for FAM120A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038014Ensembl transcript IDs: ENSMUST00000060805.7
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACACCACCTGCAGAGGGAAGGGCCCTCGGCCCCCACGGCCCCGTCTaGTCCCAGCCCAGTGGCCGACCACAGTGCCAGCTATTTCTAGCT | + |
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Preference number: 5 (lower is better) Translates to: TPPAEGRALGPHGPV*SQPSGRPQCQLFLA Trigger: AGCTAGAAATAGCTGGCACTGTGGTCGGCCACTGGGCTGGGAGCAGACGGGGCCGTGGGGGCCGAGGGCCCTTCCCTCTGCAGGTGGTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS GCA 90 bp | TGCTGCGCTGTCTGGCGCTCGTTGCCCTGCCGCTTGACCCACTCGTaGAGCCGGGCCTTCTCGAGCGCGCCATTGAAGAAGACGAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: CCAVWRSLPCRLTHS*SRAFSSAPLKKTKS Trigger: GCTCTTCGTCTTCTTCAATGGCGCGCTCGAGAAGGCCCGGCTGCACGAGTGGGTCAAGCGGCAGGGCAACGAGCGCCAGACAGCGCAGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CCA 90 bp | GGTTCTTGTCCTCCACCGCCTTGCCCAGCCAAAGCCTCTTCAGGTTaGGGCAGGTCCACTCCCGGAAGGCCAATGCTTCCACTAGTTCCG | + |
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Preference number: 5 (lower is better) Translates to: GSCPPPPCPAKASSG*GRSTPGRPMLPLVP Trigger: CGGAACTAGTGGAAGCATTGGCCTTCCGGGAGTGGACCTGCCCCAACCTGAAGAGGCTTTGGCTGGGCAAGGCGGTGGAGGACAAGAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS TCA 90 bp | GCCCAGTGGCCGACCACAGTGCCAGCTATTTCTAGCTTCCCTCCCTaGGAAGGAATAGGTTGGACTCCGCCCTGGGACTTGCTAGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: AQWPTTVPAISSFPP*EGIGWTPPWDLLVL Trigger: CAGGACTAGCAAGTCCCAGGGCGGAGTCCAACCTATTCCTTCTCAGGGAGGGAAGCTAGAAATAGCTGGCACTGTGGTCGGCCACTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS GCA 90 bp | ACAGGAGGCACGGGATTGGTTGAACAGTGCCCATATGGCTCCCTTTaGCTTCAGCTAGCTGGCTCCCCGAAGAGGCAGTGGATGAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: TGGTGLVEQCPYGSL*LQLAGSPKRQWMSL Trigger: AAGGCTCATCCACTGCCTCTTCGGGGAGCCAGCTAGCTGAAGGCAAAGGGAGCCATATGGGCACTGTTCAACCAATCCCGTGCCTCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CCA 90 bp | CACCTTGGCAGCCTGCTCCGCCTGACCATCACAGAGGTCGATGAGTaGGGTCTTCTCCCTGCTGGCTTTAAGAAGTTTGGACTGGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: HLGSLLRLTITEVDE*GLLPAGFKKFGLEE Trigger: CTCTTCCAGTCCAAACTTCTTAAAGCCAGCAGGGAGAAGACCCCACTCATCGACCTCTGTGATGGTCAGGCGGAGCAGGCTGCCAAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS GCA 90 bp | TTCTACCTTTACTTGGTCTCCTGGGTCTCCCCGTGCCAGTGGCTCTaGATGGCTTCCTGTCTTCTCCCAGCCAATCTTGTTCCCGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: FYLYLVSWVSPCQWL*MASCLLPANLVPAD Trigger: ATCAGCGGGAACAAGATTGGCTGGGAGAAGACAGGAAGCCATGCAGAGCCACTGGCACGGGGAGACCCAGGAGACCAAGTAAAGGTAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CCA 90 bp | GCTTTCTGCCAAACTAAACAGGACTCCGTAAACATACTGACGAACTaGCCTATAGAGCAGGGCGGCCGGAGGCAGGTCTTTGTTGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: AFCQTKQDSVNILTN*PIEQGGRRQVFVGF Trigger: GAAGCCAACAAAGACCTGCCTCCGGCCGCCCTGCTCTATAGGCCAGTTCGTCAGTATGTTTACGGAGTCCTGTTTAGTTTGGCAGAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS TCA 90 bp | GGTCAGACGTGTCATGAATGTTGCGAACATAATCAGCTACGGCTTTaGTCACTACATCACAGGGTGGCAAGACCAGCTGGTGGGCTCGGA | + |
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Preference number: 5 (lower is better) Translates to: GQTCHECCEHNQLRL*SLHHRVARPAGGLG Trigger: TCCGAGCCCACCAGCTGGTCTTGCCACCCTGTGATGTAGTGATCAAAGCCGTAGCTGATTATGTTCGCAACATTCATGACACGTCTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS GCA 90 bp | ATAGGAAAACGATTTGGGTTCAGGTCCAGTTGCTTGGCAACCTCGTaGATCAGATACTGGCTTGTGGTGAGACTCTTCCCGTTGCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: IGKRFGFRSSCLATS*IRYWLVVRLFPLRL Trigger: GAGCCGCAACGGGAAGAGTCTCACCACAAGCCAGTATCTGATGCACGAGGTTGCCAAGCAACTGGACCTGAACCCAAATCGTTTTCCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS GCA 90 bp | CAGTTTCAGGGCATGGGCACTGAAGTAGTAGGGGATGTTGCACAGTaGATAATCGGAGTCATATGCCACCAAGCCATGGAAACCATTCTC | + |
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Preference number: 5 (lower is better) Translates to: QFQGMGTEVVGDVAQ*IIGVICHQAMETIL Trigger: GAGAATGGTTTCCATGGCTTGGTGGCATATGACTCCGATTATGCACTGTGCAACATCCCCTACTACTTCAGTGCCCATGCCCTGAAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CCA 90 bp | TCGATGAGTGGGGTCTTCTCCCTGCTGGCTTTAAGAAGTTTGGACTaGAAGAGCTTCCCATCGAAATACATCCAAGGACAACAGTGTTCC | + |
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Preference number: 5 (lower is better) Translates to: SMSGVFSLLALRSLD*KSFPSKYIQGQQCS Trigger: GGAACACTGTTGTCCTTGGATGTATTTCGATGGGAAGCTCTTCCAGTCCAAACTTCTTAAAGCCAGCAGGGAGAAGACCCCACTCATCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS GCA 90 bp | ACTGAAGTAGTAGGGGATGTTGCACAGTGCATAATCGGAGTCATATaGCACCAAGCCATGGAAACCATTCTCTCTGCAGAAGCCAATCAC | + |
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Preference number: 5 (lower is better) Translates to: TEVVGDVAQCIIGVI*HQAMETILSAEANH Trigger: GTGATTGGCTTCTGCAGAGAGAATGGTTTCCATGGCTTGGTGGCATATGACTCCGATTATGCACTGTGCAACATCCCCTACTACTTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS GCA 90 bp | AACAGAGCAGCAAAAATAGGAAAACGATTTGGGTTCAGGTCCAGTTaGTTGGCAACCTCGTGCATCAGATACTGGCTTGTGGTGAGACTC | + |
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Preference number: 5 (lower is better) Translates to: NRAAKIGKRFGFRSS*LATSCIRYWLVVRL Trigger: GAGTCTCACCACAAGCCAGTATCTGATGCACGAGGTTGCCAAGCAACTGGACCTGAACCCAAATCGTTTTCCTATTTTTGCTGCTCTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS GCA 90 bp | CATAATCGGAGTCATATGCCACCAAGCCATGGAAACCATTCTCTCTaGAGAAGCCAATCACTTCTTGATGATGATCCTCAATGCTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: HNRSHMPPSHGNHSL*RSQSLLDDDPQCSV Trigger: CACAGAGCATTGAGGATCATCATCAAGAAGTGATTGGCTTCTGCAGAGAGAATGGTTTCCATGGCTTGGTGGCATATGACTCCGATTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS TCA 72 bp | TCTGCTGCGCTGTCTGGCGCTCGTTGCCCTGCCGCTTaGCCCACTCGTGCAGCCGGGCCTTCTCGAGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: SAALSGARCPAA*PTRAAGPSRAR Trigger: GCGCGCTCGAGAAGGCCCGGCTGCACGAGTGGGTCAAGCGGCAGGGCAACGAGCGCCAGACAGCGCAGCAGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CCA 72 bp | CCTCGGCCCCCACGGCCCCGTCTGCTCCCAGCCCAGTaGCCGACCACAGTGCCAGCTATTTCTAGCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: PRPPRPRLLPAQ*PTTVPAISSFP Trigger: AGGGAAGCTAGAAATAGCTGGCACTGTGGTCGGCCACTGGGCTGGGAGCAGACGGGGCCGTGGGGGCCGAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS GCA 72 bp | GTCTGGCGCTCGTTGCCCTGCCGCTTGACCCACTCGTaGAGCCGGGCCTTCTCGAGCGCGCCATTGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: VWRSLPCRLTHS*SRAFSSAPLKK Trigger: CTTCTTCAATGGCGCGCTCGAGAAGGCCCGGCTGCACGAGTGGGTCAAGCGGCAGGGCAACGAGCGCCAGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CCA 72 bp | CCTCCACCGCCTTGCCCAGCCAAAGCCTCTTCAGGTTaGGGCAGGTCCACTCCCGGAAGGCCAATGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: PPPPCPAKASSG*GRSTPGRPMLP Trigger: TGGAAGCATTGGCCTTCCGGGAGTGGACCTGCCCCAACCTGAAGAGGCTTTGGCTGGGCAAGGCGGTGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CCA 72 bp | TTTTGCCGGGAGAAGCTGAGGCCCTCCAGGATGCTCTaGCGCATCTTCTCCACCTTGGCAGCCTGCTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: FCREKLRPSRML*RIFSTLAACSA Trigger: GGCGGAGCAGGCTGCCAAGGTGGAGAAGATGCGCCAGAGCATCCTGGAGGGCCTCAGCTTCTCCCGGCAAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CAA 72 bp | TCCTCCACCGCCTTGCCCAGCCAAAGCCTCTTCAGGTaGGGGCAGGTCCACTCCCGGAAGGCCAATGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SSTALPSQSLFR*GQVHSRKANAS Trigger: GGAAGCATTGGCCTTCCGGGAGTGGACCTGCCCCAACCTGAAGAGGCTTTGGCTGGGCAAGGCGGTGGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CAA 90 bp | TGCCGCTTGACCCACTCGTGCAGCCGGGCCTTCTCGAGCGCGCCATaGAAGAAGACGAAGAGCTCGATGTTGCCTCCGAAGCAGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: CRLTHSCSRAFSSAP*KKTKSSMLPPKQAL Trigger: CAAGGCCTGCTTCGGAGGCAACATCGAGCTCTTCGTCTTCTTCAATGGCGCGCTCGAGAAGGCCCGGCTGCACGAGTGGGTCAAGCGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS TCA 72 bp | CCCACTCGTGCAGCCGGGCCTTCTCGAGCGCGCCATTaGAGAAGACGAAGAGCTCGATGTTGCCTCCGAAGC | + |
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Preference number: 6 (lower is better) Translates to: PTRAAGPSRARH*RRRRARCCLRS Trigger: GCTTCGGAGGCAACATCGAGCTCTTCGTCTTCTTCAATGGCGCGCTCGAGAAGGCCCGGCTGCACGAGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS TCA 72 bp | GTGGGAAGGGCAGTGGGTGGTTTTGCCGGGAGAAGCTaGGGCCCTCCAGGATGCTCTGGCGCATCTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VGRAVGGFAGRS*GPPGCSGASSP Trigger: TGGAGAAGATGCGCCAGAGCATCCTGGAGGGCCTCAGCTTCTCCCGGCAAAACCACCCACTGCCCTTCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CCA 72 bp | AGACGAAGAGCTCGATGTTGCCTCCGAAGCAGGCCTTaGCCAGAGCCGCCAGGTAGCCGAGCATGTGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: RRRARCCLRSRP*PEPPGSRACGS Trigger: GGAACCACATGCTCGGCTACCTGGCGGCTCTGGCCAAGGCCTGCTTCGGAGGCAACATCGAGCTCTTCGTCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CCA 72 bp | TTGTTCTGGACATGGCTGACGATCTGCTGCGCTGTCTaGCGCTCGTTGCCCTGCCGCTTGACCCACTCGTGC | + |
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Preference number: 6 (lower is better) Translates to: LFWTWLTICCAV*RSLPCRLTHSC Trigger: GCACGAGTGGGTCAAGCGGCAGGGCAACGAGCGCCAGACAGCGCAGCAGATCGTCAGCCATGTCCAGAACAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CAA 90 bp | CGGTTCTTGTCCTCCACCGCCTTGCCCAGCCAAAGCCTCTTCAGGTaGGGGCAGGTCCACTCCCGGAAGGCCAATGCTTCCACTAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: RFLSSTALPSQSLFR*GQVHSRKANASTSS Trigger: GGAACTAGTGGAAGCATTGGCCTTCCGGGAGTGGACCTGCCCCAACCTGAAGAGGCTTTGGCTGGGCAAGGCGGTGGAGGACAAGAACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CAA 72 bp | ACCCACTCGTGCAGCCGGGCCTTCTCGAGCGCGCCATaGAAGAAGACGAAGAGCTCGATGTTGCCTCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: THSCSRAFSSAP*KKTKSSMLPPK Trigger: CTTCGGAGGCAACATCGAGCTCTTCGTCTTCTTCAATGGCGCGCTCGAGAAGGCCCGGCTGCACGAGTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS GCA 72 bp | TGCTGCCGTCACCCGGAAGGCACGGTAAGGGCCTGTTaGTACTGTTTCCCCATAATGGCCTCCGAAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: CCRHPEGTVRAC*YCFPIMASEAT Trigger: TGTGGCTTCGGAGGCCATTATGGGGAAACAGTAGCAACAGGCCCTTACCGTGCCTTCCGGGTGACGGCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CAA 72 bp | ATGCTGCCGTCACCCGGAAGGCACGGTAAGGGCCTGTaGCTACTGTTTCCCCATAATGGCCTCCGAAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: MLPSPGRHGKGL*LLFPHNGLRSH Trigger: GTGGCTTCGGAGGCCATTATGGGGAAACAGTAGCAACAGGCCCTTACCGTGCCTTCCGGGTGACGGCAGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CAA 90 bp | AGTGTCCTGATGCTGCCGTCACCCGGAAGGCACGGTAAGGGCCTGTaGCTACTGTTTCCCCATAATGGCCTCCGAAGCCACAGACTCCTG | + |
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Preference number: 6 (lower is better) Translates to: SVLMLPSPGRHGKGL*LLFPHNGLRSHRLL Trigger: CAGGAGTCTGTGGCTTCGGAGGCCATTATGGGGAAACAGTAGCAACAGGCCCTTACCGTGCCTTCCGGGTGACGGCAGCATCAGGACACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS GCA 72 bp | ACGGGATTGGTTGAACAGTGCCCATATGGCTCCCTTTaGCTTCAGCTAGCTGGCTCCCCGAAGAGGCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: TGLVEQCPYGSL*LQLAGSPKRQW Trigger: CCACTGCCTCTTCGGGGAGCCAGCTAGCTGAAGGCAAAGGGAGCCATATGGGCACTGTTCAACCAATCCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS GCA 72 bp | AGCTCCTGCCTTCGCAGAATGCGAGCTCCAGGCCACTaGACCATATACCGTAAGACGCAGCAGAGCACCATG | + |
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Preference number: 6 (lower is better) Translates to: SSCLRRMRAPGH*TIYRKTQQSTM Trigger: CATGGTGCTCTGCTGCGTCTTACGGTATATGGTGCAGTGGCCTGGAGCTCGCATTCTGCGAAGGCAGGAGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CCA 72 bp | ACAGTGCCCATATGGCTCCCTTTGCCTTCAGCTAGCTaGCTCCCCGAAGAGGCAGTGGATGAGCCTTCTACC | + |
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Preference number: 6 (lower is better) Translates to: TVPIWLPLPSAS*LPEEAVDEPST Trigger: GGTAGAAGGCTCATCCACTGCCTCTTCGGGGAGCCAGCTAGCTGAAGGCAAAGGGAGCCATATGGGCACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS TCA 72 bp | CCGACCACAGTGCCAGCTATTTCTAGCTTCCCTCCCTaGGAAGGAATAGGTTGGACTCCGCCCTGGGACTTG | + |
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Preference number: 6 (lower is better) Translates to: PTTVPAISSFPP*EGIGWTPPWDL Trigger: CAAGTCCCAGGGCGGAGTCCAACCTATTCCTTCTCAGGGAGGGAAGCTAGAAATAGCTGGCACTGTGGTCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS GCA 72 bp | AGCTGGTGGGCTCGGACCTTCAGTGAGGCGAGTGGATaGTCTGGACCAAGTAAACTCCAATGGAAGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: SWWARTFSEASG*SGPSKLQWKEA Trigger: GGCTTCCTTCCATTGGAGTTTACTTGGTCCAGAGCATCCACTCGCCTCACTGAAGGTCCGAGCCCACCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CCA 72 bp | TTGATCACTACATCACAGGGTGGCAAGACCAGCTGGTaGGCTCGGACCTTCAGTGAGGCGAGTGGATGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LITTSQGGKTSW*ARTFSEASGCS Trigger: AGAGCATCCACTCGCCTCACTGAAGGTCCGAGCCCACCAGCTGGTCTTGCCACCCTGTGATGTAGTGATCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS GCA 72 bp | TTGGCATTGACAGGAGGCACGGGATTGGTTGAACAGTaGCCATATGGCTCCCTTTGCCTTCAGCTAGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: LALTGGTGLVEQ*PYGSLCLQLAG Trigger: GCCAGCTAGCTGAAGGCAAAGGGAGCCATATGGGCACTGTTCAACCAATCCCGTGCCTCCTGTCAATGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CCA 72 bp | AGGTCCAGTTGCTTGGCAACCTCGTGCATCAGATACTaGCTTGTGGTGAGACTCTTCCCGTTGCGGCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: RSSCLATSCIRY*LVVRLFPLRLS Trigger: ACTGAGCCGCAACGGGAAGAGTCTCACCACAAGCCAGTATCTGATGCACGAGGTTGCCAAGCAACTGGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CCA 72 bp | CTTTGCCTTCAGCTAGCTGGCTCCCCGAAGAGGCAGTaGATGAGCCTTCTACCTTTACTTGGTCTCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: LCLQLAGSPKRQ*MSLLPLLGLLG Trigger: ACCCAGGAGACCAAGTAAAGGTAGAAGGCTCATCCACTGCCTCTTCGGGGAGCCAGCTAGCTGAAGGCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS GCA 72 bp | CGATTTGGGTTCAGGTCCAGTTGCTTGGCAACCTCGTaGATCAGATACTGGCTTGTGGTGAGACTCTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: RFGFRSSCLATS*IRYWLVVRLFP Trigger: CGGGAAGAGTCTCACCACAAGCCAGTATCTGATGCACGAGGTTGCCAAGCAACTGGACCTGAACCCAAATCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CCA 72 bp | CAAACTAAACAGGACTCCGTAAACATACTGACGAACTaGCCTATAGAGCAGGGCGGCCGGAGGCAGGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: QTKQDSVNILTN*PIEQGGRRQVF Trigger: AAAGACCTGCCTCCGGCCGCCCTGCTCTATAGGCCAGTTCGTCAGTATGTTTACGGAGTCCTGTTTAGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CAA 90 bp | CAGAGGTCGATGAGTGGGGTCTTCTCCCTGCTGGCTTTAAGAAGTTaGGACTGGAAGAGCTTCCCATCGAAATACATCCAAGGACAACAG | + |
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Preference number: 6 (lower is better) Translates to: QRSMSGVFSLLALRS*DWKSFPSKYIQGQQ Trigger: CTGTTGTCCTTGGATGTATTTCGATGGGAAGCTCTTCCAGTCCAAACTTCTTAAAGCCAGCAGGGAGAAGACCCCACTCATCGACCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS TCA 72 bp | ACAGCTGAATTCCTCTCGGGTCTAAGTTGTCAATCTTaGGTTCCTGCAGCTGGTCCGGCTCATAGAGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: TAEFLSGLSCQS*VPAAGPAHRVW Trigger: CCAAACTCTATGAGCCGGACCAGCTGCAGGAACTCAAGATTGACAACTTAGACCCGAGAGGAATTCAGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CAA 90 bp | CACCAAGCCATGGAAACCATTCTCTCTGCAGAAGCCAATCACTTCTaGATGATGATCCTCAATGCTCTGTGCAACCTTGACGTGGAAGCG | + |
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Preference number: 6 (lower is better) Translates to: HQAMETILSAEANHF*MMILNALCNLDVEA Trigger: CGCTTCCACGTCAAGGTTGCACAGAGCATTGAGGATCATCATCAAGAAGTGATTGGCTTCTGCAGAGAGAATGGTTTCCATGGCTTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CAA 90 bp | AGAGCAGCAAAAATAGGAAAACGATTTGGGTTCAGGTCCAGTTGCTaGGCAACCTCGTGCATCAGATACTGGCTTGTGGTGAGACTCTTC | + |
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Preference number: 6 (lower is better) Translates to: RAAKIGKRFGFRSSC*ATSCIRYWLVVRLF Trigger: GAAGAGTCTCACCACAAGCCAGTATCTGATGCACGAGGTTGCCAAGCAACTGGACCTGAACCCAAATCGTTTTCCTATTTTTGCTGCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS TCA 72 bp | TGTCATGAATGTTGCGAACATAATCAGCTACGGCTTTaGTCACTACATCACAGGGTGGCAAGACCAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: CHECCEHNQLRL*SLHHRVARPAG Trigger: ACCAGCTGGTCTTGCCACCCTGTGATGTAGTGATCAAAGCCGTAGCTGATTATGTTCGCAACATTCATGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS GCA 72 bp | GCAAAAATAGGAAAACGATTTGGGTTCAGGTCCAGTTaGTTGGCAACCTCGTGCATCAGATACTGGCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: AKIGKRFGFRSS*LATSCIRYWLV Trigger: CACAAGCCAGTATCTGATGCACGAGGTTGCCAAGCAACTGGACCTGAACCCAAATCGTTTTCCTATTTTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CAA 72 bp | AAAATAGGAAAACGATTTGGGTTCAGGTCCAGTTGCTaGGCAACCTCGTGCATCAGATACTGGCTTGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: KIGKRFGFRSSC*ATSCIRYWLVV Trigger: CACCACAAGCCAGTATCTGATGCACGAGGTTGCCAAGCAACTGGACCTGAACCCAAATCGTTTTCCTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CAA 72 bp | ATGAGTGGGGTCTTCTCCCTGCTGGCTTTAAGAAGTTaGGACTGGAAGAGCTTCCCATCGAAATACATCCAA | + |
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Preference number: 6 (lower is better) Translates to: MSGVFSLLALRS*DWKSFPSKYIQ Trigger: TTGGATGTATTTCGATGGGAAGCTCTTCCAGTCCAAACTTCTTAAAGCCAGCAGGGAGAAGACCCCACTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CAA 72 bp | AGCAAAAATAGGAAAACGATTTGGGTTCAGGTCCAGTaGCTTGGCAACCTCGTGCATCAGATACTGGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: SKNRKTIWVQVQ*LGNLVHQILAC Trigger: ACAAGCCAGTATCTGATGCACGAGGTTGCCAAGCAACTGGACCTGAACCCAAATCGTTTTCCTATTTTTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS TCA 72 bp | ATGTGGTGGGTGAAATGGCATGGGCTTGCTAGTTGCTaGATAATATCCAACTGCTCTCTTAAACCGAATGAC | + |
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Preference number: 6 (lower is better) Translates to: MWWVKWHGLASC*IISNCSLKPND Trigger: GTCATTCGGTTTAAGAGAGCAGTTGGATATTATTCAGCAACTAGCAAGCCCATGCCATTTCACCCACCACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS GCA 72 bp | AGTCATATGCCACCAAGCCATGGAAACCATTCTCTCTaGAGAAGCCAATCACTTCTTGATGATGATCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: SHMPPSHGNHSL*RSQSLLDDDPQ Trigger: TTGAGGATCATCATCAAGAAGTGATTGGCTTCTGCAGAGAGAATGGTTTCCATGGCTTGGTGGCATATGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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| CDS CAA 72 bp | ATGGAAACCATTCTCTCTGCAGAAGCCAATCACTTCTaGATGATGATCCTCAATGCTCTGTGCAACCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: METILSAEANHF*MMILNALCNLD Trigger: GTCAAGGTTGCACAGAGCATTGAGGATCATCATCAAGAAGTGATTGGCTTCTGCAGAGAGAATGGTTTCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060805.7 |
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