Pregenerated sensors for FAM117B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041040Ensembl transcript IDs: ENSMUST00000036540.12, ENSMUST00000151630.2
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTAGTGCTTCAAGGCCAAGCAGGTGAAGCACGTCTGTGGCCTTCATaGGCAGGGCAGAACACTCAGAGGACCACTAGTTCTTCCAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: LVLQGQAGEARLWPS*AGQNTQRTTSSSRS Trigger: GCTCCTGGAAGAACTAGTGGTCCTCTGAGTGTTCTGCCCTGCGCATGAAGGCCACAGACGTGCTTCACCTGCTTGGCCTTGAAGCACTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR CCA 90 bp | CAGAGGACCACTAGTTCTTCCAGGAGCCTTGCTGTCACACCTCACTaGAAAGCCAAAGCACTTCACAGCCAACCGGGAGGACAGGATACC | + |
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Preference number: 1 (lower is better) Translates to: QRTTSSSRSLAVTPH*KAKALHSQPGGQDT Trigger: GGTATCCTGTCCTCCCGGTTGGCTGTGAAGTGCTTTGGCTTTCCAGTGAGGTGTGACAGCAAGGCTCCTGGAAGAACTAGTGGTCCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR CCA 90 bp | AGGTTTCAGCTAGTGCTTCAAGGCCAAGCAGGTGAAGCACGTCTGTaGCCTTCATGCGCAGGGCAGAACACTCAGAGGACCACTAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: RFQLVLQGQAGEARL*PSCAGQNTQRTTSS Trigger: AGAACTAGTGGTCCTCTGAGTGTTCTGCCCTGCGCATGAAGGCCACAGACGTGCTTCACCTGCTTGGCCTTGAAGCACTAGCTGAAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR CCA 90 bp | TCAAGATTCTGCAGCTCCCGATTGCTACTCAAAGGATCACACTCCTaGCAAACTACTAACCCTGACCAAATCCACAAGACAACACCACCA | + |
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Preference number: 1 (lower is better) Translates to: SRFCSSRLLLKGSHS*QTTNPDQIHKTTPP Trigger: TGGTGGTGTTGTCTTGTGGATTTGGTCAGGGTTAGTAGTTTGCCAGGAGTGTGATCCTTTGAGTAGCAATCGGGAGCTGCAGAATCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR GCA 90 bp | ACACATGAAGAAAAAGTCAGTTCTCAAGATTCTGCAGCTCCCGATTaGTACTCAAAGGATCACACTCCTGGCAAACTACTAACCCTGACC | + |
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Preference number: 1 (lower is better) Translates to: THEEKVSSQDSAAPD*YSKDHTPGKLLTLT Trigger: GGTCAGGGTTAGTAGTTTGCCAGGAGTGTGATCCTTTGAGTAGCAATCGGGAGCTGCAGAATCTTGAGAACTGACTTTTTCTTCATGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR TCA 90 bp | CAAGAACAACAGACTTTATTTGAACATAGGAAGTTCTATTCCCTGTaGCAAAGCAGTAAGTGCTCAGGTTCAGGGACACAGTCCACAACA | + |
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Preference number: 1 (lower is better) Translates to: QEQQTLFEHRKFYSL*QSSKCSGSGTQSTT Trigger: TGTTGTGGACTGTGTCCCTGAACCTGAGCACTTACTGCTTTGTCACAGGGAATAGAACTTCCTATGTTCAAATAAAGTCTGTTGTTCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR GCA 90 bp | TTGCTTTTAAATGTCTCCTTCTCCCTTCAGATCAACTCAACAGACTaGCAGCTGCCTTTCTTCTGTACTTCTGATATTGGTAAAATGGTA | + |
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Preference number: 1 (lower is better) Translates to: LLLNVSFSLQINSTD*QLPFFCTSDIGKMV Trigger: TACCATTTTACCAATATCAGAAGTACAGAAGAAAGGCAGCTGGCAGTCTGTTGAGTTGATCTGAAGGGAGAAGGAGACATTTAAAAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR TCA 90 bp | CTAGAAATTAAATACTGTCATGTGATACTGGCAATGGTTATCAGATaGGCTCGAATCCAAAACTGTATAGACGTTCCAAAGGTACCTGTT | + |
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Preference number: 1 (lower is better) Translates to: LEIKYCHVILAMVIR*ARIQNCIDVPKVPV Trigger: AACAGGTACCTTTGGAACGTCTATACAGTTTTGGATTCGAGCTCATCTGATAACCATTGCCAGTATCACATGACAGTATTTAATTTCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR CAA 90 bp | GCGCAGGGCAGAACACTCAGAGGACCACTAGTTCTTCCAGGAGCCTaGCTGTCACACCTCACTGGAAAGCCAAAGCACTTCACAGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: AQGRTLRGPLVLPGA*LSHLTGKPKHFTAN Trigger: GTTGGCTGTGAAGTGCTTTGGCTTTCCAGTGAGGTGTGACAGCAAGGCTCCTGGAAGAACTAGTGGTCCTCTGAGTGTTCTGCCCTGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCCGATTGCTACTCAAAGGATCACACTCCTGGCAAACTACTAACCCTGACGCTGTCACACCTCACTaGAAAGCCAAAGCACTTCAC | + |
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Preference number: 2 (lower is better) Translates to: SSRLLLKGSHSWQTTNPDAVTPH*KAKALH Trigger: GTGAAGTGCTTTGGCTTTCCAGTGAGGTGTGACAGC...GTCAGGGTTAGTAGTTTGCCAGGAGTGTGATCCTTTGAGTAGCAATCGGGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR-3UTR TCA 90 bp | AGCTCCCGATTGCTACTCAAAGGATCACACTCCTGGCAAACTACTAACCCTGACCTTTGGTCCCAAAGCTaGAAACAGCCGAGAAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: SSRLLLKGSHSWQTTNPDLWSQS*KQPRKA Trigger: TGCTTTTCTCGGCTGTTTTCAGCTTTGGGACCAAAG...GTCAGGGTTAGTAGTTTGCCAGGAGTGTGATCCTTTGAGTAGCAATCGGGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR-3UTR TCA 90 bp | AATTCGCCTTCAAAATTGTGGCCCTCTCATGCAGGGTTTGCCATCTACCTGTTGTTTCTTTTGGCTCACTaGCTGTTAAAGCAACCTGTC | + |
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Preference number: 2 (lower is better) Translates to: NSPSKLWPSHAGFAIYLLFLLAH*LLKQPV Trigger: GACAGGTTGCTTTAACAGTCAGTGAGCCAAAAGAAA...CAACAGGTAGATGGCAAACCCTGCATGAGAGGGCCACAATTTTGAAGGCGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR CAA 90 bp | CACAGAAGACCAGAGAGCTCCATACTCCTAGCTAACAATCCACACTaGAGAGTTTCTTTTGGCTCACTGACTGTTAAAGCAACCTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: HRRPESSILLANNPH*RVSFGSLTVKATCL Trigger: AAGACAGGTTGCTTTAACAGTCAGTGAGCCAAAAGAAACTCTCAAGTGTGGATTGTTAGCTAGGAGTATGGAGCTCTCTGGTCTTCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCCGATTGCTACTCAAAGGATCACACTCCTGGCAAACTACTAACCCTGACCCACCAAAGGATCATTaGAACATCTTGTTTGTTACT | + |
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Preference number: 2 (lower is better) Translates to: SSRLLLKGSHSWQTTNPDPPKDH*NILFVT Trigger: AGTAACAAACAAGATGTTCCAATGATCCTTTGGTGG...GTCAGGGTTAGTAGTTTGCCAGGAGTGTGATCCTTTGAGTAGCAATCGGGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR-3UTR GCA 90 bp | AATTCGCCTTCAAAATTGTGGCCCTCTCATGCAGGGTTTGCCATCTACCTGTTGTTCAGAAATCATGTTTaGAGGGATCCGGTTTTGTAT | + |
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Preference number: 2 (lower is better) Translates to: NSPSKLWPSHAGFAIYLLFRNHV*RDPVLY Trigger: ATACAAAACCGGATCCCTGCAAACATGATTTCTGAA...CAACAGGTAGATGGCAAACCCTGCATGAGAGGGCCACAATTTTGAAGGCGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR CAA 90 bp | TGCATTACCTATCAATTCTTACTTGGGAGAAGAACAGTCATGAGATaGACATTGCTGGGGAAATGTCAACAATCCCTTTGGTCCCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: CITYQFLLGRRTVMR*TLLGKCQQSLWSQS Trigger: GCTTTGGGACCAAAGGGATTGTTGACATTTCCCCAGCAATGTCAATCTCATGACTGTTCTTCTCCCAAGTAAGAATTGATAGGTAATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR-3UTR GCA 90 bp | ATACTTGGTTCAATGCATTACCTATCAATTCTTACTTGGGAGAAGAACAGTCATTTCTTCCAGGAGCCTTaGTGTCACACCTCACTGGAA | + |
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Preference number: 2 (lower is better) Translates to: ILGSMHYLSILTWEKNSHFFQEP*CHTSLE Trigger: TTCCAGTGAGGTGTGACAGCAAGGCTCCTGGAAGAA...ATGACTGTTCTTCTCCCAAGTAAGAATTGATAGGTAATGCATTGAACCAAGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR-3UTR TCA 90 bp | GAGGCAGATTTGGTTATGGTCCTAGGTCTAAGTAAGAAACACTGTAAACAAAATCACAGCGCCAACACATaGAGAAAAAGTCAGTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: EADLVMVLGLSKKHCKQNHSANT*RKSQFS Trigger: TGAGAACTGACTTTTTCTTCATGTGTTGGCGCTGTG...ATTTTGTTTACAGTGTTTCTTACTTAGACCTAGGACCATAACCAAATCTGCCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR-3UTR TCA 90 bp | GAGGCAGATTTGGTTATGGTCCTAGGTCTAAGTAAGAAACACTGTAAACAAAATAGGGAGGAAACTGCTTaGGGGTCAAGTATAACTAAG | + |
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Preference number: 2 (lower is better) Translates to: EADLVMVLGLSKKHCKQNREETA*GSSITK Trigger: CTTAGTTATACTTGACCCTCAAGCAGTTTCCTCCCT...ATTTTGTTTACAGTGTTTCTTACTTAGACCTAGGACCATAACCAAATCTGCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR-3UTR CCA 90 bp | GAGGCAGATTTGGTTATGGTCCTAGGTCTAAGTAAGAAACACTGTAAACAAAATCTTTCCCCCAGTGTGTaGAATGTTGGAGAAGAAACT | + |
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Preference number: 2 (lower is better) Translates to: EADLVMVLGLSKKHCKQNLSPSV*NVGEET Trigger: AGTTTCTTCTCCAACATTCCACACACTGGGGGAAAG...ATTTTGTTTACAGTGTTTCTTACTTAGACCTAGGACCATAACCAAATCTGCCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR-3UTR CCA 90 bp | GAGGCAGATTTGGTTATGGTCCTAGGTCTAAGTAAGAAACACTGTAAACAAAATGACTGGACCAGTGGATaGAATTCGCCTTCAAAATTG | + |
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Preference number: 2 (lower is better) Translates to: EADLVMVLGLSKKHCKQNDWTSG*NSPSKL Trigger: CAATTTTGAAGGCGAATTCCATCCACTGGTCCAGTC...ATTTTGTTTACAGTGTTTCTTACTTAGACCTAGGACCATAACCAAATCTGCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR-3UTR TCA 90 bp | GAGGCAGATTTGGTTATGGTCCTAGGTCTAAGTAAGAAACACTGTAAACAAAATCTAACAATCCACACTTaGGAGTTTCTTTTGGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: EADLVMVLGLSKKHCKQNLTIHT*EFLLAH Trigger: GTGAGCCAAAAGAAACTCTCAAGTGTGGATTGTTAG...ATTTTGTTTACAGTGTTTCTTACTTAGACCTAGGACCATAACCAAATCTGCCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR CCA 72 bp | CTAGTGCTTCAAGGCCAAGCAGGTGAAGCACGTCTGTaGCCTTCATGCGCAGGGCAGAACACTCAGAGGACC | + |
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Preference number: 3 (lower is better) Translates to: LVLQGQAGEARL*PSCAGQNTQRT Trigger: GGTCCTCTGAGTGTTCTGCCCTGCGCATGAAGGCCACAGACGTGCTTCACCTGCTTGGCCTTGAAGCACTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR GCA 72 bp | CAAGGCCAAGCAGGTGAAGCACGTCTGTGGCCTTCATaGGCAGGGCAGAACACTCAGAGGACCACTAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: QGQAGEARLWPS*AGQNTQRTTSS Trigger: AGAACTAGTGGTCCTCTGAGTGTTCTGCCCTGCGCATGAAGGCCACAGACGTGCTTCACCTGCTTGGCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR TCA 72 bp | CGGGAGGACAGGATACCACATGATACCACAGTCACGTaGTCTGCAGGGTTCTTAGCTCCCAGCACCCATTGC | + |
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Preference number: 3 (lower is better) Translates to: REDRIPHDTTVT*SAGFLAPSTHC Trigger: GCAATGGGTGCTGGGAGCTAAGAACCCTGCAGATCACGTGACTGTGGTATCATGTGGTATCCTGTCCTCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR TCA 72 bp | CACATGCCCTTAATCCCAGCACTTGGGAGGGGCATCTaGGTGCCAGGCCAGCCTGGTCTACATAATAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: HMPLIPALGRGI*VPGQPGLHNKS Trigger: GCTTTTATTATGTAGACCAGGCTGGCCTGGCACTCAGATGCCCCTCCCAAGTGCTGGGATTAAGGGCATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR TCA 72 bp | CCATGCACAGCCTTTTCAGGGTCTCTTGGGGCTATATaGTACAGTGATGATCAAAGTCAGACTGACAGCGGC | + |
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Preference number: 3 (lower is better) Translates to: PCTAFSGSLGAI*YSDDQSQTDSG Trigger: GCCGCTGTCAGTCTGACTTTGATCATCACTGTATCATATAGCCCCAAGAGACCCTGAAAAGGCTGTGCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR-3UTR CAA 90 bp | AGCTCCCGATTGCTACTCAAAGGATCACACTCCTGGCAAACTACTAACCCTGACATGTCAACAATCCCTTaGGTCCCAAAGCTGAAAACA | + |
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Preference number: 3 (lower is better) Translates to: SSRLLLKGSHSWQTTNPDMSTIP*VPKLKT Trigger: TGTTTTCAGCTTTGGGACCAAAGGGATTGTTGACAT...GTCAGGGTTAGTAGTTTGCCAGGAGTGTGATCCTTTGAGTAGCAATCGGGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR-3UTR CAA 90 bp | AATTCGCCTTCAAAATTGTGGCCCTCTCATGCAGGGTTTGCCATCTACCTGTTGGTCATGAGATTGACATaGCTGGGGAAATGTCAACAA | + |
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Preference number: 3 (lower is better) Translates to: NSPSKLWPSHAGFAIYLLVMRLT*LGKCQQ Trigger: TTGTTGACATTTCCCCAGCAATGTCAATCTCATGAC...CAACAGGTAGATGGCAAACCCTGCATGAGAGGGCCACAATTTTGAAGGCGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR-3UTR CAA 90 bp | CCCCCAGTGTGTGGAATGTTGGAGAAGAAACTAGCAAAATCTGTAAGTAGCAAACCTTTTCAGGGTCTCTaGGGGCTATATGATACAGTG | + |
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Preference number: 3 (lower is better) Translates to: PPVCGMLEKKLAKSVSSKPFQGL*GLYDTV Trigger: CACTGTATCATATAGCCCCAAGAGACCCTGAAAAGG...TTTGCTACTTACAGATTTTGCTAGTTTCTTCTCCAACATTCCACACACTGGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR TCA 72 bp | GCAGAGCCCATTTTAAACTGTCTAGGCATTCTAAGGTaGCAAACAGCTTGCCAAGATGTACTGCTACCTCTT | + |
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Preference number: 3 (lower is better) Translates to: AEPILNCLGILR*QTACQDVLLPL Trigger: AAGAGGTAGCAGTACATCTTGGCAAGCTGTTTGTCACCTTAGAATGCCTAGACAGTTTAAAATGGGCTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR TCA 72 bp | ATGAAGTTGTTTTGGCCTGTGATAGAGCCAAGAATCTaGAAAAAGGAAGGTCTCCTCAAACCTGTGAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: MKLFWPVIEPRI*KKEGLLKPVSQ Trigger: CTGGCTCACAGGTTTGAGGAGACCTTCCTTTTTTCAGATTCTTGGCTCTATCACAGGCCAAAACAACTTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151630.2 |
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| 3UTR GCA 72 bp | GAAAAAGTCAGTTCTCAAGATTCTGCAGCTCCCGATTaGTACTCAAAGGATCACACTCCTGGCAAACTACTA | + |
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Preference number: 3 (lower is better) Translates to: EKVSSQDSAAPD*YSKDHTPGKLL Trigger: TAGTAGTTTGCCAGGAGTGTGATCCTTTGAGTAGCAATCGGGAGCTGCAGAATCTTGAGAACTGACTTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR GCA 72 bp | AATGTCTCCTTCTCCCTTCAGATCAACTCAACAGACTaGCAGCTGCCTTTCTTCTGTACTTCTGATATTGGT | + |
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Preference number: 3 (lower is better) Translates to: NVSFSLQINSTD*QLPFFCTSDIG Trigger: ACCAATATCAGAAGTACAGAAGAAAGGCAGCTGGCAGTCTGTTGAGTTGATCTGAAGGGAGAAGGAGACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR-3UTR CAA 90 bp | GAGGCAGATTTGGTTATGGTCCTAGGTCTAAGTAAGAAACACTGTAAACAAAATAGAACAGTCATGAGATaGACATTGCTGGGGAAATGT | + |
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Preference number: 3 (lower is better) Translates to: EADLVMVLGLSKKHCKQNRTVMR*TLLGKC Trigger: ACATTTCCCCAGCAATGTCAATCTCATGACTGTTCT...ATTTTGTTTACAGTGTTTCTTACTTAGACCTAGGACCATAACCAAATCTGCCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR-3UTR CAA 90 bp | GAGGCAGATTTGGTTATGGTCCTAGGTCTAAGTAAGAAACACTGTAAACAAAATGCTAACAATCCACACTaGAGAGTTTCTTTTGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: EADLVMVLGLSKKHCKQNANNPH*RVSFGS Trigger: TGAGCCAAAAGAAACTCTCAAGTGTGGATTGTTAGC...ATTTTGTTTACAGTGTTTCTTACTTAGACCTAGGACCATAACCAAATCTGCCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| 3UTR TCA 72 bp | AAATACTGTCATGTGATACTGGCAATGGTTATCAGATaGGCTCGAATCCAAAACTGTATAGACGTTCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: KYCHVILAMVIR*ARIQNCIDVPK Trigger: CTTTGGAACGTCTATACAGTTTTGGATTCGAGCTCATCTGATAACCATTGCCAGTATCACATGACAGTATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| CDS-3UTR CCA 90 bp | TGGCCTTCATGCGCAGGGCAGAACACTCAGAGGACCACTAGTTCTTCCAGGAGCACGCTCCCGTCTGCGTaGCCACCGTGGGGCTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: WPSCAGQNTQRTTSSSRSTLPSA*PPWGWY Trigger: GTACCAGCCCCACGGTGGCCACGCAGACGGGAGCGT...GCTCCTGGAAGAACTAGTGGTCCTCTGAGTGTTCTGCCCTGCGCATGAAGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| CDS-3UTR GCA 90 bp | AGCTCCCGATTGCTACTCAAAGGATCACACTCCTGGCAAACTACTAACCCTGACGTCGCCCTCATGGGCTaGAGGCGGCTCCCAGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SSRLLLKGSHSWQTTNPDVALMG*RRLPGP Trigger: GGGCCCTGGGAGCCGCCTGCAGCCCATGAGGGCGAC...GTCAGGGTTAGTAGTTTGCCAGGAGTGTGATCCTTTGAGTAGCAATCGGGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| CDS-3UTR GCA 90 bp | TGGCCTTCATGCGCAGGGCAGAACACTCAGAGGACCACTAGTTCTTCCAGGAGCGTGGGGCTGCCATGTTaGTGCTGCTGCTTCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: WPSCAGQNTQRTTSSSRSVGLPC*CCCFSW Trigger: CCAGCTGAAGCAGCAGCAGCAACATGGCAGCCCCAC...GCTCCTGGAAGAACTAGTGGTCCTCTGAGTGTTCTGCCCTGCGCATGAAGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| CDS-3UTR TCA 90 bp | TGGCCTTCATGCGCAGGGCAGAACACTCAGAGGACCACTAGTTCTTCCAGGAGCGTTGGGGACACAGACTaGGAGCGGCTGCTGTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: WPSCAGQNTQRTTSSSRSVGDTD*ERLLLL Trigger: CAACAACAGCAGCCGCTCTCAGTCTGTGTCCCCAAC...GCTCCTGGAAGAACTAGTGGTCCTCTGAGTGTTCTGCCCTGCGCATGAAGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| CDS-3UTR GCA 90 bp | AGCTCCCGATTGCTACTCAAAGGATCACACTCCTGGCAAACTACTAACCCTGACGCTGCTGCTTCTCTGTaGGAGGGGCGGAGGCGCACG | + |
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Preference number: 4 (lower is better) Translates to: SSRLLLKGSHSWQTTNPDAAASL*EGRRRT Trigger: CGTGCGCCTCCGCCCCTCGCACAGAGAAGCAGCAGC...GTCAGGGTTAGTAGTTTGCCAGGAGTGTGATCCTTTGAGTAGCAATCGGGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| CDS-3UTR CCA 90 bp | CCCTTCAGATCAACTCAACAGACTGCCAGCTGCCTTTCTTCTGTACTTCTGATATCTGCGTGGCCACCGTaGGGCTGGTACGCGCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: PFRSTQQTASCLSSVLLISAWPP*GWYAPP Trigger: CGGCGGCGCGTACCAGCCCCACGGTGGCCACGCAGA...TATCAGAAGTACAGAAGAAAGGCAGCTGGCAGTCTGTTGAGTTGATCTGAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| CDS-3UTR CCA 90 bp | AGCTCCCGATTGCTACTCAAAGGATCACACTCCTGGCAAACTACTAACCCTGACTCGCTCGGCCACAGGTaGGTGGGCGACGAACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: SSRLLLKGSHSWQTTNPDSLGHR*VGDELG Trigger: GCCCAGTTCGTCGCCCACCCACCTGTGGCCGAGCGA...GTCAGGGTTAGTAGTTTGCCAGGAGTGTGATCCTTTGAGTAGCAATCGGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| CDS-3UTR GCA 90 bp | CCCCCAGTGTGTGGAATGTTGGAGAAGAAACTAGCAAAATCTGTAAGTAGCAAAAGGGGCGGTGGCGGCTaGGGGCGCGGAGGACTGCTT | + |
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Preference number: 4 (lower is better) Translates to: PPVCGMLEKKLAKSVSSKRGGGG*GRGGLL Trigger: AAGCAGTCCTCCGCGCCCGCAGCCGCCACCGCCCCT...TTTGCTACTTACAGATTTTGCTAGTTTCTTCTCCAACATTCCACACACTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| CDS-3UTR GCA 90 bp | CCCCCAGTGTGTGGAATGTTGGAGAAGAAACTAGCAAAATCTGTAAGTAGCAAATGGGCGACGACACGGTaGCCAGCAGGGGCGGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: PPVCGMLEKKLAKSVSSKWATTR*PAGAVA Trigger: CGCCACCGCCCCTGCTGGGCACCGTGTCGTCGCCCA...TTTGCTACTTACAGATTTTGCTAGTTTCTTCTCCAACATTCCACACACTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| CDS-3UTR CCA 90 bp | CCCCCAGTGTGTGGAATGTTGGAGAAGAAACTAGCAAAATCTGTAAGTAGCAAAGGGCGCCGGCGGGCGTaGGAGACCCATTGCGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PPVCGMLEKKLAKSVSSKGRRRA*ETHCAS Trigger: TGAGGCGCAATGGGTCTCCCACGCCCGCCGGCGCCC...TTTGCTACTTACAGATTTTGCTAGTTTCTTCTCCAACATTCCACACACTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CCA 90 bp | TGGCCTTCATGCGCAGGGCAGAACACTCAGAGGACCACTAGTTCTTCCAGGAGCGCCATAGAGATGGGCTaGAGCAAAGTGGTGGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: WPSCAGQNTQRTTSSSRSAIEMG*SKVVVM Trigger: CATGACCACCACTTTGCTCCAGCCCATCTCTATGGC...GCTCCTGGAAGAACTAGTGGTCCTCTGAGTGTTCTGCCCTGCGCATGAAGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| 3UTR CAA 72 bp | ATTAGGAGCTGGGGAAATAAGCCAGCGACACAGCACTaGCTCAGCATGCATGAGGCCCTGGGTTTGATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IRSWGNKPATQH*LSMHEALGLIP Trigger: GGGGATCAAACCCAGGGCCTCATGCATGCTGAGCAAGTGCTGTGTCGCTGGCTTATTTCCCCAGCTCCTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR TCA 90 bp | AGCTCCCGATTGCTACTCAAAGGATCACACTCCTGGCAAACTACTAACCCTGACTGGTCATGCCAGTGGTaGCGGTCAGGCTGTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSRLLLKGSHSWQTTNPDWSCQW*RSGCDQ Trigger: CTGGTCACAGCCTGACCGTCACCACTGGCATGACCA...GTCAGGGTTAGTAGTTTGCCAGGAGTGTGATCCTTTGAGTAGCAATCGGGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR GCA 90 bp | CCCCCAGTGTGTGGAATGTTGGAGAAGAAACTAGCAAAATCTGTAAGTAGCAAAACGGACGCTCCCGTCTaGGTGGCCACCGTGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPVCGMLEKKLAKSVSSKTDAPV*VATVGL Trigger: CAGCCCCACGGTGGCCACGCAGACGGGAGCGTCCGT...TTTGCTACTTACAGATTTTGCTAGTTTCTTCTCCAACATTCCACACACTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR GCA 90 bp | TGGCCTTCATGCGCAGGGCAGAACACTCAGAGGACCACTAGTTCTTCCAGGAGCATATTCTTCAGCCCATaGACTCTCGGTCTGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WPSCAGQNTQRTTSSSRSIFFSP*TLGLCG Trigger: GCCACACAGACCGAGAGTGCATGGGCTGAAGAATAT...GCTCCTGGAAGAACTAGTGGTCCTCTGAGTGTTCTGCCCTGCGCATGAAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CCA 90 bp | TGGCCTTCATGCGCAGGGCAGAACACTCAGAGGACCACTAGTTCTTCCAGGAGCTTTGGAGCAGGAGCCTaGCTCTGGTTAATAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WPSCAGQNTQRTTSSSRSFGAGA*LWLIAA Trigger: TGCAGCTATTAACCAGAGCCAGGCTCCTGCTCCAAA...GCTCCTGGAAGAACTAGTGGTCCTCTGAGTGTTCTGCCCTGCGCATGAAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR GCA 90 bp | AATTCGCCTTCAAAATTGTGGCCCTCTCATGCAGGGTTTGCCATCTACCTGTTGGTCCCTCATGCAGGGTaGGGCTTGCCCACGAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: NSPSKLWPSHAGFAIYLLVPHAG*GLPTNV Trigger: GACATTCGTGGGCAAGCCGCACCCTGCATGAGGGAC...CAACAGGTAGATGGCAAACCCTGCATGAGAGGGCCACAATTTTGAAGGCGAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CCA 90 bp | AGCTCCCGATTGCTACTCAAAGGATCACACTCCTGGCAAACTACTAACCCTGACCACTCTCGGTCTGTGTaGCCTTGTCCCTCATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSRLLLKGSHSWQTTNPDHSRSV*PCPSCR Trigger: CCTGCATGAGGGACAAGGCCACACAGACCGAGAGTG...GTCAGGGTTAGTAGTTTGCCAGGAGTGTGATCCTTTGAGTAGCAATCGGGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR GCA 90 bp | GAGGCAGATTTGGTTATGGTCCTAGGTCTAAGTAAGAAACACTGTAAACAAAATGCCGAGGGTCGGCCCTaGTCTGGGGACCTCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: EADLVMVLGLSKKHCKQNAEGRP*SGDLLR Trigger: CCGGAGGAGGTCCCCAGAGCAGGGCCGACCCTCGGC...ATTTTGTTTACAGTGTTTCTTACTTAGACCTAGGACCATAACCAAATCTGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CCA 90 bp | TGGCCTTCATGCGCAGGGCAGAACACTCAGAGGACCACTAGTTCTTCCAGGAGCTGGTTAATAGCTGCATaGTTGCCATGGAATGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: WPSCAGQNTQRTTSSSRSWLIAA*LPWNGD Trigger: GTCTCCATTCCATGGCAACCATGCAGCTATTAACCA...GCTCCTGGAAGAACTAGTGGTCCTCTGAGTGTTCTGCCCTGCGCATGAAGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CCA 90 bp | AATTCGCCTTCAAAATTGTGGCCCTCTCATGCAGGGTTTGCCATCTACCTGTTGATGGAGGGAGGCGGATaGCAGGACTGTACTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NSPSKLWPSHAGFAIYLLMEGGG*QDCTGS Trigger: GGAACCAGTACAGTCCTGCCATCCGCCTCCCTCCAT...CAACAGGTAGATGGCAAACCCTGCATGAGAGGGCCACAATTTTGAAGGCGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR TCA 90 bp | AGCTCCCGATTGCTACTCAAAGGATCACACTCCTGGCAAACTACTAACCCTGACAATGCTGGAGGAGCTTaGGGAAGGCGGGTGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSRLLLKGSHSWQTTNPDNAGGA*GRRVCF Trigger: AAAACACACCCGCCTTCCTCAAGCTCCTCCAGCATT...GTCAGGGTTAGTAGTTTGCCAGGAGTGTGATCCTTTGAGTAGCAATCGGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR GCA 90 bp | CCCTTCAGATCAACTCAACAGACTGCCAGCTGCCTTTCTTCTGTACTTCTGATACCATGTTGCTGCTGCTaGTTCAGCTGGAACGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: PFRSTQQTASCLSSVLLIPCCCC*FSWNGT Trigger: GGTGCCGTTCCAGCTGAAGCAGCAGCAGCAACATGG...TATCAGAAGTACAGAAGAAAGGCAGCTGGCAGTCTGTTGAGTTGATCTGAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR GCA 90 bp | TGGCCTTCATGCGCAGGGCAGAACACTCAGAGGACCACTAGTTCTTCCAGGAGCCTGTGTTTGCTTCTCTaGAGTTGCTGGCGTAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: WPSCAGQNTQRTTSSSRSLCLLL*SCWRNF Trigger: AAAATTACGCCAGCAACTGCAGAGAAGCAAACACAG...GCTCCTGGAAGAACTAGTGGTCCTCTGAGTGTTCTGCCCTGCGCATGAAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR GCA 90 bp | CCCTTCAGATCAACTCAACAGACTGCCAGCTGCCTTTCTTCTGTACTTCTGATAAGCGGCTGCTGTTGTTaGTTCCCTTGTCTGCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: PFRSTQQTASCLSSVLLISGCCC*FPCLHP Trigger: GGGGTGCAGACAAGGGAAGCAACAACAGCAGCCGCT...TATCAGAAGTACAGAAGAAAGGCAGCTGGCAGTCTGTTGAGTTGATCTGAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR GCA 90 bp | CCCTTCAGATCAACTCAACAGACTGCCAGCTGCCTTTCTTCTGTACTTCTGATAAATGGGTTCTGGTGGTaGATGGAGGGAGGCGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: PFRSTQQTASCLSSVLLINGFWW*MEGGGW Trigger: CCATCCGCCTCCCTCCATGCACCACCAGAACCCATT...TATCAGAAGTACAGAAGAAAGGCAGCTGGCAGTCTGTTGAGTTGATCTGAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CCA 90 bp | GAGGCAGATTTGGTTATGGTCCTAGGTCTAAGTAAGAAACACTGTAAACAAAATGCACCGTCGCCCTCATaGGCTGCAGGCGGCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EADLVMVLGLSKKHCKQNAPSPS*AAGGSQ Trigger: CTGGGAGCCGCCTGCAGCCCATGAGGGCGACGGTGC...ATTTTGTTTACAGTGTTTCTTACTTAGACCTAGGACCATAACCAAATCTGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CCA 90 bp | TGGCCTTCATGCGCAGGGCAGAACACTCAGAGGACCACTAGTTCTTCCAGGAGCCTTGAGAGTAAGATCTaGTGTAGGGAGAAGTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WPSCAGQNTQRTTSSSRSLESKI*CREKWF Trigger: AAACCACTTCTCCCTACACCAGATCTTACTCTCAAG...GCTCCTGGAAGAACTAGTGGTCCTCTGAGTGTTCTGCCCTGCGCATGAAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CCA 90 bp | AGCTCCCGATTGCTACTCAAAGGATCACACTCCTGGCAAACTACTAACCCTGACATGGCAGGACTGTACTaGTTCCTCGAGATACCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSRLLLKGSHSWQTTNPDMAGLY*FLEIPA Trigger: AGCGGGTATCTCGAGGAACCAGTACAGTCCTGCCAT...GTCAGGGTTAGTAGTTTGCCAGGAGTGTGATCCTTTGAGTAGCAATCGGGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| 3UTR CAA 72 bp | AGAACACTCAGAGGACCACTAGTTCTTCCAGGAGCCTaGCTGTCACACCTCACTGGAAAGCCAAAGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTLRGPLVLPGA*LSHLTGKPKHF Trigger: GAAGTGCTTTGGCTTTCCAGTGAGGTGTGACAGCAAGGCTCCTGGAAGAACTAGTGGTCCTCTGAGTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CCA 90 bp | GAGGCAGATTTGGTTATGGTCCTAGGTCTAAGTAAGAAACACTGTAAACAAAATGGGTGGGCGACGAACTaGGCGACGACACGGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EADLVMVLGLSKKHCKQNGWATN*ATTRCP Trigger: TGGGCACCGTGTCGTCGCCCAGTTCGTCGCCCACCC...ATTTTGTTTACAGTGTTTCTTACTTAGACCTAGGACCATAACCAAATCTGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CCA 90 bp | GAGGCAGATTTGGTTATGGTCCTAGGTCTAAGTAAGAAACACTGTAAACAAAATTCGGCCACAGGTGGGTaGGCGACGAACTGGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: EADLVMVLGLSKKHCKQNSATGG*ATNWAT Trigger: CGTCGCCCAGTTCGTCGCCCACCCACCTGTGGCCGA...ATTTTGTTTACAGTGTTTCTTACTTAGACCTAGGACCATAACCAAATCTGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CCA 90 bp | ATACTTGGTTCAATGCATTACCTATCAATTCTTACTTGGGAGAAGAACAGTCATTGCACACCGGGGCGCTaGGGCTCCTCTTCTCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ILGSMHYLSILTWEKNSHCTPGR*GSSSPP Trigger: CGGCGGAGAAGAGGAGCCCCAGCGCCCCGGTGTGCA...ATGACTGTTCTTCTCCCAAGTAAGAATTGATAGGTAATGCATTGAACCAAGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CCA 90 bp | AGCTCCCGATTGCTACTCAAAGGATCACACTCCTGGCAAACTACTAACCCTGACCTTCAGCTTCCTCAATaGGTTCTGGTGGTGCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSRLLLKGSHSWQTTNPDLQLPQ*VLVVHG Trigger: TCCATGCACCACCAGAACCCATTGAGGAAGCTGAAG...GTCAGGGTTAGTAGTTTGCCAGGAGTGTGATCCTTTGAGTAGCAATCGGGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR GCA 90 bp | GAGGCAGATTTGGTTATGGTCCTAGGTCTAAGTAAGAAACACTGTAAACAAAATGCGTGGGAGACCCATTaGGCCTCACCCGCTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: EADLVMVLGLSKKHCKQNAWETH*ASPAGT Trigger: TGTCCCAGCGGGTGAGGCGCAATGGGTCTCCCACGC...ATTTTGTTTACAGTGTTTCTTACTTAGACCTAGGACCATAACCAAATCTGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR GCA 90 bp | CCCCCAGTGTGTGGAATGTTGGAGAAGAAACTAGCAAAATCTGTAAGTAGCAAAATGTCTCGGGGCCAGTaGCCAGCAAGGTATGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPVCGMLEKKLAKSVSSKMSRGQ*PARYGA Trigger: AGCTCCATACCTTGCTGGGCACTGGCCCCGAGACAT...TTTGCTACTTACAGATTTTGCTAGTTTCTTCTCCAACATTCCACACACTGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR GCA 90 bp | CCCTTCAGATCAACTCAACAGACTGCCAGCTGCCTTTCTTCTGTACTTCTGATACTCGGTGGTGACGACTaGTGTGTTTGCTTCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFRSTQQTASCLSSVLLILGGDD*CVCFSA Trigger: TGCAGAGAAGCAAACACAGCAGTCGTCACCACCGAG...TATCAGAAGTACAGAAGAAAGGCAGCTGGCAGTCTGTTGAGTTGATCTGAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR GCA 90 bp | AATTCGCCTTCAAAATTGTGGCCCTCTCATGCAGGGTTTGCCATCTACCTGTTGTGTCAATGCTTCGTGTaGTGCTGCTTCTCTGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: NSPSKLWPSHAGFAIYLLCQCFV*CCFSVR Trigger: TCGCACAGAGAAGCAGCAGCACACGAAGCATTGACA...CAACAGGTAGATGGCAAACCCTGCATGAGAGGGCCACAATTTTGAAGGCGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR GCA 90 bp | CCCTTCAGATCAACTCAACAGACTGCCAGCTGCCTTTCTTCTGTACTTCTGATACAGACTGAGAGCGGCTaGTGTTGTTGCTTCCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PFRSTQQTASCLSSVLLIQTESG*CCCFPC Trigger: ACAAGGGAAGCAACAACAGCAGCCGCTCTCAGTCTG...TATCAGAAGTACAGAAGAAAGGCAGCTGGCAGTCTGTTGAGTTGATCTGAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR GCA 90 bp | AATTCGCCTTCAAAATTGTGGCCCTCTCATGCAGGGTTTGCCATCTACCTGTTGGCTCTGGTTAATAGCTaGATGGTTGCCATGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: NSPSKLWPSHAGFAIYLLALVNS*MVAMEW Trigger: CCATTCCATGGCAACCATGCAGCTATTAACCAGAGC...CAACAGGTAGATGGCAAACCCTGCATGAGAGGGCCACAATTTTGAAGGCGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CCA 90 bp | CCCCCAGTGTGTGGAATGTTGGAGAAGAAACTAGCAAAATCTGTAAGTAGCAAAGGTGAGGAAGGATGTTaGGGACACAGACTGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PPVCGMLEKKLAKSVSSKGEEGC*GHRLRA Trigger: CGCTCTCAGTCTGTGTCCCCAACATCCTTCCTCACC...TTTGCTACTTACAGATTTTGCTAGTTTCTTCTCCAACATTCCACACACTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR GCA 90 bp | CCCCCAGTGTGTGGAATGTTGGAGAAGAAACTAGCAAAATCTGTAAGTAGCAAAAGCAAGGTATGGAGCTaGGAGGGTATCCAGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPVCGMLEKKLAKSVSSKSKVWS*EGIQGR Trigger: TCTTCCCTGGATACCCTCGCAGCTCCATACCTTGCT...TTTGCTACTTACAGATTTTGCTAGTTTCTTCTCCAACATTCCACACACTGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR GCA 90 bp | ATACTTGGTTCAATGCATTACCTATCAATTCTTACTTGGGAGAAGAACAGTCATTGGCCTTGTCCCTCATaGAGGGTGCGGCTTGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ILGSMHYLSILTWEKNSHWPCPS*RVRLAH Trigger: GTGGGCAAGCCGCACCCTGCATGAGGGACAAGGCCA...ATGACTGTTCTTCTCCCAAGTAAGAATTGATAGGTAATGCATTGAACCAAGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CCA 90 bp | AATTCGCCTTCAAAATTGTGGCCCTCTCATGCAGGGTTTGCCATCTACCTGTTGCCTTTCACAGCCCTCTaGAGGTTCCCTTTTAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: NSPSKLWPSHAGFAIYLLPFTAL*RFPFKH Trigger: ATGTTTAAAAGGGAACCTCCAGAGGGCTGTGAAAGG...CAACAGGTAGATGGCAAACCCTGCATGAGAGGGCCACAATTTTGAAGGCGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CCA 90 bp | AGCTCCCGATTGCTACTCAAAGGATCACACTCCTGGCAAACTACTAACCCTGACCTCATGAAGTTGTTTTaGCGAGCATTCCTCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSRLLLKGSHSWQTTNPDLMKLF*RAFLKD Trigger: GTCTTTGAGGAATGCTCGCCAAAACAACTTCATGAG...GTCAGGGTTAGTAGTTTGCCAGGAGTGTGATCCTTTGAGTAGCAATCGGGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR GCA 90 bp | AATTCGCCTTCAAAATTGTGGCCCTCTCATGCAGGGTTTGCCATCTACCTGTTGTTGCTTCTCTGCAGTTaGTGGCGTAATTTTGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: NSPSKLWPSHAGFAIYLLLLLCS*WRNFAI Trigger: GATTGCAAAATTACGCCAGCAACTGCAGAGAAGCAA...CAACAGGTAGATGGCAAACCCTGCATGAGAGGGCCACAATTTTGAAGGCGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR GCA 90 bp | ATACTTGGTTCAATGCATTACCTATCAATTCTTACTTGGGAGAAGAACAGTCATGTTGCTTCCCTTGTCTaGACCCCCAGGGGTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILGSMHYLSILTWEKNSHVASLV*TPRGLC Trigger: ACACAGACCCCTGGGGGTGCAGACAAGGGAAGCAAC...ATGACTGTTCTTCTCCCAAGTAAGAATTGATAGGTAATGCATTGAACCAAGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CCA 90 bp | GTCAGGACAGTAAAAGGCTGGAATCTCATGAAGTTGTTTTGGCCTGTGATAGAGCCTTTCACAGCCCTCTaGAGGTTCCCTTTTAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: VRTVKGWNLMKLFWPVIEPFTAL*RFPFKH Trigger: ATGTTTAAAAGGGAACCTCCAGAGGGCTGTGAAAGG...CTCTATCACAGGCCAAAACAACTTCATGAGATTCCAGCCTTTTACTGTCCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151630.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCAGATTTGGTTATGGTCCTAGGTCTAAGTAAGAAACACTGTAAACAAAATTTCCTCAATGGGTTCTaGTGGTGCATGGAGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EADLVMVLGLSKKHCKQNFLNGF*WCMEGG Trigger: GCCTCCCTCCATGCACCACCAGAACCCATTGAGGAA...ATTTTGTTTACAGTGTTTCTTACTTAGACCTAGGACCATAACCAAATCTGCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| 3UTR CAA 72 bp | CCAGAGAGCTCCATACTCCTAGCTAACAATCCACACTaGAGAGTTTCTTTTGGCTCACTGACTGTTAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PESSILLANNPH*RVSFGSLTVKA Trigger: TGCTTTAACAGTCAGTGAGCCAAAAGAAACTCTCAAGTGTGGATTGTTAGCTAGGAGTATGGAGCTCTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| 3UTR CAA 72 bp | AGAAAAAGTCAGTTCTCAAGATTCTGCAGCTCCCGATaGCTACTCAAAGGATCACACTCCTGGCAAACTACT | + |
|
Preference number: 4 (lower is better) Translates to: RKSQFSRFCSSR*LLKGSHSWQTT Trigger: AGTAGTTTGCCAGGAGTGTGATCCTTTGAGTAGCAATCGGGAGCTGCAGAATCTTGAGAACTGACTTTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR TCA 90 bp | ATACTTGGTTCAATGCATTACCTATCAATTCTTACTTGGGAGAAGAACAGTCATGGCGGAGGCGCACGATaGCCATCTGGAATATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILGSMHYLSILTWEKNSHGGGAR*PSGISC Trigger: ACAAGATATTCCAGATGGTCATCGTGCGCCTCCGCC...ATGACTGTTCTTCTCCCAAGTAAGAATTGATAGGTAATGCATTGAACCAAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR GCA 90 bp | ATACTTGGTTCAATGCATTACCTATCAATTCTTACTTGGGAGAAGAACAGTCATCAATGCTTCGTGTGCTaGTGCTTCTCTGTGCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILGSMHYLSILTWEKNSHQCFVC*CFSVRG Trigger: CCCTCGCACAGAGAAGCAGCAGCACACGAAGCATTG...ATGACTGTTCTTCTCCCAAGTAAGAATTGATAGGTAATGCATTGAACCAAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR GCA 90 bp | ATACTTGGTTCAATGCATTACCTATCAATTCTTACTTGGGAGAAGAACAGTCATGGGTCTGTGTGTCAATaGTTCGTGTGCTGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILGSMHYLSILTWEKNSHGSVCQ*FVCCCF Trigger: GAAGCAGCAGCACACGAAGCATTGACACACAGACCC...ATGACTGTTCTTCTCCCAAGTAAGAATTGATAGGTAATGCATTGAACCAAGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CCA 90 bp | ATACTTGGTTCAATGCATTACCTATCAATTCTTACTTGGGAGAAGAACAGTCATGCAGGAGCCTGGCTCTaGTTAATAGCTGCATGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILGSMHYLSILTWEKNSHAGAWL*LIAAWL Trigger: CAACCATGCAGCTATTAACCAGAGCCAGGCTCCTGC...ATGACTGTTCTTCTCCCAAGTAAGAATTGATAGGTAATGCATTGAACCAAGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| 3UTR CAA 72 bp | TTTAAACTGTCTAGGCATTCTAAGGTGACAAACAGCTaGCCAAGATGTACTGCTACCTCTTGGTTTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: FKLSRHSKVTNS*PRCTATSWFLM Trigger: CATGAGAAACCAAGAGGTAGCAGTACATCTTGGCAAGCTGTTTGTCACCTTAGAATGCCTAGACAGTTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR TCA 90 bp | GAGGCAGATTTGGTTATGGTCCTAGGTCTAAGTAAGAAACACTGTAAACAAAATATGATCTCAATCTCCTaGTTCAGCCCTTCCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: EADLVMVLGLSKKHCKQNMISIS*FSPSTL Trigger: CAGTGTGGAAGGGCTGAATCAGGAGATTGAGATCAT...ATTTTGTTTACAGTGTTTCTTACTTAGACCTAGGACCATAACCAAATCTGCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR TCA 90 bp | AGGACAGTAAAAGGCTGGAATCTCATGAAGTTGTTTTGGCCTGTGATAGAGCCAGTTATTAGGTTTTGGTaGGGTTGCATATTTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RTVKGWNLMKLFWPVIEPVIRFW*GCIFWQ Trigger: TTGCCAAAATATGCAACCTCACCAAAACCTAATAAC...TGGCTCTATCACAGGCCAAAACAACTTCATGAGATTCCAGCCTTTTACTGTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000151630.2 |
||
| CDS-3UTR GCA 90 bp | GAGGCAGATTTGGTTATGGTCCTAGGTCTAAGTAAGAAACACTGTAAACAAAATCCATGGAATGGAGACTaGCTTTCTTTATCTCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EADLVMVLGLSKKHCKQNPWNGD*LSLSRW Trigger: CCACCGAGATAAAGAAAGGCAGTCTCCATTCCATGG...ATTTTGTTTACAGTGTTTCTTACTTAGACCTAGGACCATAACCAAATCTGCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR GCA 90 bp | ATACTTGGTTCAATGCATTACCTATCAATTCTTACTTGGGAGAAGAACAGTCATCGAGATACCCGCTCTTaGTCTGTGTTTGTAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILGSMHYLSILTWEKNSHRDTRS*SVFVDR Trigger: CCTGTCTACAAACACAGAGCAAGAGCGGGTATCTCG...ATGACTGTTCTTCTCCCAAGTAAGAATTGATAGGTAATGCATTGAACCAAGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR TCA 90 bp | ATACTTGGTTCAATGCATTACCTATCAATTCTTACTTGGGAGAAGAACAGTCATTCTTTATCTCGGTGGTaGCGACTGCTGTGTTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILGSMHYLSILTWEKNSHSLSRW*RLLCLL Trigger: AAGCAAACACAGCAGTCGTCACCACCGAGATAAAGA...ATGACTGTTCTTCTCCCAAGTAAGAATTGATAGGTAATGCATTGAACCAAGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR TCA 90 bp | CCCCCAGTGTGTGGAATGTTGGAGAAGAAACTAGCAAAATCTGTAAGTAGCAAAGTTATTAGGTTTTGGTaGGGTTGCATATTTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PPVCGMLEKKLAKSVSSKVIRFW*GCIFWQ Trigger: TTGCCAAAATATGCAACCTCACCAAAACCTAATAAC...TTTGCTACTTACAGATTTTGCTAGTTTCTTCTCCAACATTCCACACACTGGGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| 3UTR CAA 72 bp | TATCAATTCTTACTTGGGAGAAGAACAGTCATGAGATaGACATTGCTGGGGAAATGTCAACAATCCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YQFLLGRRTVMR*TLLGKCQQSLW Trigger: CCAAAGGGATTGTTGACATTTCCCCAGCAATGTCAATCTCATGACTGTTCTTCTCCCAAGTAAGAATTGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CCA 90 bp | GAGGCAGATTTGGTTATGGTCCTAGGTCTAAGTAAGAAACACTGTAAACAAAATCTTCTCTGCAGTTGCTaGCGTAATTTTGCAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EADLVMVLGLSKKHCKQNLLCSC*RNFAIS Trigger: AGAGATTGCAAAATTACGCCAGCAACTGCAGAGAAG...ATTTTGTTTACAGTGTTTCTTACTTAGACCTAGGACCATAACCAAATCTGCCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| 3UTR CAA 72 bp | ACTCCAATTAGCAACAGTATCTATAGAGAGGCAGATTaGGTTATGGTCCTAGGTCTAAGTAAGAAACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TPISNSIYREAD*VMVLGLSKKHC Trigger: ACAGTGTTTCTTACTTAGACCTAGGACCATAACCAAATCTGCCTCTCTATAGATACTGTTGCTAATTGGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CCA 90 bp | GAGGCAGATTTGGTTATGGTCCTAGGTCTAAGTAAGAAACACTGTAAACAAAATATCTGGAATATCTTGTaGAATCAGCTGTTCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EADLVMVLGLSKKHCKQNIWNIL*NQLFFL Trigger: AAGGAAGAACAGCTGATTCCACAAGATATTCCAGAT...ATTTTGTTTACAGTGTTTCTTACTTAGACCTAGGACCATAACCAAATCTGCCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 90 bp | TACCGCGCGTGGACGTCACGGACGCTCCCGTCTGCGTGGCCACCGTaGGGCTGGTACGCGCCGCCGCGCTGCCGCCGCCGCCGCGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: YRAWTSRTLPSAWPP*GWYAPPRCRRRRAW Trigger: CCACGCGCGGCGGCGGCGGCAGCGCGGCGGCGCGTACCAGCCCCACGGTGGCCACGCAGACGGGAGCGTCCGTGACGTCCACGCGCGGTA 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 90 bp | GCGGGCGCGGAGGACTGCTTCGGGCCCCAGGCGCCGTGCCGCGCGTaGGGCTGGTACCGCGCGTGGACGTCACGGACGCTCCCGTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: AGAEDCFGPQAPCRA*GWYRAWTSRTLPSA Trigger: CGCAGACGGGAGCGTCCGTGACGTCCACGCGCGGTACCAGCCCCACGCGCGGCACGGCGCCTGGGGCCCGAAGCAGTCCTCCGCGCCCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 90 bp | GCGGAGGACTGCTTCGGGCCCCAGGCGCCGTGCCGCGCGTGGGGCTaGTACCGCGCGTGGACGTCACGGACGCTCCCGTCTGCGTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AEDCFGPQAPCRAWG*YRAWTSRTLPSAWP Trigger: TGGCCACGCAGACGGGAGCGTCCGTGACGTCCACGCGCGGTACCAGCCCCACGCGCGGCACGGCGCCTGGGGCCCGAAGCAGTCCTCCGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS GCA 90 bp | CCGCCGCCGCCGCCGCCCCGCGTGGGGCTGCCATGTTGCTGCTGCTaGTTCAGCTGGAACGGCACCGTCGCCCTCATGGGCTGCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PPPPPPRVGLPCCCC*FSWNGTVALMGCRR Trigger: CCGCCTGCAGCCCATGAGGGCGACGGTGCCGTTCCAGCTGAAGCAGCAGCAGCAACATGGCAGCCCCACGCGGGGCGGCGGCGGCGGCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 90 bp | GGGCCGCAATCACCTCGCTCGGCCACAGGTGGGTGGGCGACGAACTaGGCGACGACACGGTGCCCAGCAGGGGCGGTGGCGGCTGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GPQSPRSATGGWATN*ATTRCPAGAVAAAG Trigger: GCCCGCAGCCGCCACCGCCCCTGCTGGGCACCGTGTCGTCGCCCAGTTCGTCGCCCACCCACCTGTGGCCGAGCGAGGTGATTGCGGCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 90 bp | GCCCTGCTCTGGGGACCTCCTCCGGTGGCGGACGCGGGCGGAGGGTaGGGCCGCAATCACCTCGCTCGGCCACAGGTGGGTGGGCGACGA | + |
|
Preference number: 5 (lower is better) Translates to: ALLWGPPPVADAGGG*GRNHLARPQVGGRR Trigger: TCGTCGCCCACCCACCTGTGGCCGAGCGAGGTGATTGCGGCCCCACCCTCCGCCCGCGTCCGCCACCGGAGGAGGTCCCCAGAGCAGGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 90 bp | CTCTTCTCCGCCGAGGGTCGGCCCTGCTCTGGGGACCTCCTCCGGTaGCGGACGCGGGCGGAGGGTGGGGCCGCAATCACCTCGCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LFSAEGRPCSGDLLR*RTRAEGGAAITSLG Trigger: GCCGAGCGAGGTGATTGCGGCCCCACCCTCCGCCCGCGTCCGCCACCGGAGGAGGTCCCCAGAGCAGGGCCGACCCTCGGCGGAGAAGAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 90 bp | GGGCGGAGGGTGGGGCCGCAATCACCTCGCTCGGCCACAGGTGGGTaGGCGACGAACTGGGCGACGACACGGTGCCCAGCAGGGGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GRRVGPQSPRSATGG*ATNWATTRCPAGAV Trigger: CACCGCCCCTGCTGGGCACCGTGTCGTCGCCCAGTTCGTCGCCCACCCACCTGTGGCCGAGCGAGGTGATTGCGGCCCCACCCTCCGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 90 bp | ACGCGGGCGGAGGGTGGGGCCGCAATCACCTCGCTCGGCCACAGGTaGGTGGGCGACGAACTGGGCGACGACACGGTGCCCAGCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TRAEGGAAITSLGHR*VGDELGDDTVPSRG Trigger: GCCCCTGCTGGGCACCGTGTCGTCGCCCAGTTCGTCGCCCACCCACCTGTGGCCGAGCGAGGTGATTGCGGCCCCACCCTCCGCCCGCGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS GCA 90 bp | TTGCCGCCGCCGCCGCCGCCCCGCGTGGGGCTGCCATGTTGCTGCTaGTGCTTCAGCTGGAACGGCACCGTCGCCCTCATGGGCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPPPPPPRVGLPCCC*CFSWNGTVALMGCR Trigger: CCTGCAGCCCATGAGGGCGACGGTGCCGTTCCAGCTGAAGCAGCAGCAGCAACATGGCAGCCCCACGCGGGGCGGCGGCGGCGGCGGCAA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS GCA 90 bp | CCGTTGTTGCCGCCGCCGCCGCCGCCCCGCGTGGGGCTGCCATGTTaGTGCTGCTGCTTCAGCTGGAACGGCACCGTCGCCCTCATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PLLPPPPPPRVGLPC*CCCFSWNGTVALMG Trigger: GCCCATGAGGGCGACGGTGCCGTTCCAGCTGAAGCAGCAGCAGCAACATGGCAGCCCCACGCGGGGCGGCGGCGGCGGCGGCAACAACGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 90 bp | CCGCCGCCCCGCGTGGGGCTGCCATGTTGCTGCTGCTGCTTCAGCTaGAACGGCACCGTCGCCCTCATGGGCTGCAGGCGGCTCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PPPRVGLPCCCCCFS*NGTVALMGCRRLPG Trigger: CCCTGGGAGCCGCCTGCAGCCCATGAGGGCGACGGTGCCGTTCCAGCTGAAGCAGCAGCAGCAACATGGCAGCCCCACGCGGGGCGGCGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 90 bp | CGCCTCCGTTGCCTCCGTTGTTGCCGCCGCCGCCGCCGCCCCGCGTaGGGCTGCCATGTTGCTGCTGCTGCTTCAGCTGGAACGGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: RLRCLRCCRRRRRPA*GCHVAAAASAGTAP Trigger: CGGTGCCGTTCCAGCTGAAGCAGCAGCAGCAACATGGCAGCCCCACGCGGGGCGGCGGCGGCGGCGGCAACAACGGAGGCAACGGAGGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS GCA 90 bp | TTGTTGCCGCCGCCGCCGCCGCCCCGCGTGGGGCTGCCATGTTGCTaGTGCTGCTTCAGCTGGAACGGCACCGTCGCCCTCATGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLPPPPPPRVGLPCC*CCFSWNGTVALMGC Trigger: GCAGCCCATGAGGGCGACGGTGCCGTTCCAGCTGAAGCAGCAGCAGCAACATGGCAGCCCCACGCGGGGCGGCGGCGGCGGCGGCAACAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS GCA 90 bp | GCACTCTCGGTCTGTGTGGCCTTGTCCCTCATGCAGGGTGCGGCTTaGCCACGAATGTCTCGGGGCCAGTGCCCAGCAAGGTATGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALSVCVALSLMQGAA*PRMSRGQCPARYGA Trigger: AGCTCCATACCTTGCTGGGCACTGGCCCCGAGACATTCGTGGGCAAGCCGCACCCTGCATGAGGGACAAGGCCACACAGACCGAGAGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS GCA 90 bp | TCCCTCATGCAGGGTGCGGCTTGCCCACGAATGTCTCGGGGCCAGTaGCCAGCAAGGTATGGAGCTGCGAGGGTATCCAGGGAAGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLMQGAACPRMSRGQ*PARYGAARVSREDV Trigger: CACATCTTCCCTGGATACCCTCGCAGCTCCATACCTTGCTGGGCACTGGCCCCGAGACATTCGTGGGCAAGCCGCACCCTGCATGAGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS TCA 90 bp | TCAGCCCTTCCACACTGTTCCGGAACCGAGAACCAGACGACTTGGTaGTGGGGCCAGCGGGAACGAGCGTGCTCTTTGGAGCAGGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SALPHCSGTENQTTW*WGQRERACSLEQEP Trigger: AGGCTCCTGCTCCAAAGAGCACGCTCGTTCCCGCTGGCCCCATCACCAAGTCGTCTGGTTCTCGGTTCCGGAACAGTGTGGAAGGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 90 bp | TGCGGCTTGCCCACGAATGTCTCGGGGCCAGTGCCCAGCAAGGTATaGAGCTGCGAGGGTATCCAGGGAAGATGTGCGTCGGATAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: CGLPTNVSGPVPSKV*SCEGIQGRCASDNA Trigger: AGCATTATCCGACGCACATCTTCCCTGGATACCCTCGCAGCTCCATACCTTGCTGGGCACTGGCCCCGAGACATTCGTGGGCAAGCCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS GCA 90 bp | TTGCCCACGAATGTCTCGGGGCCAGTGCCCAGCAAGGTATGGAGCTaGGAGGGTATCCAGGGAAGATGTGCGTCGGATAATGCTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPTNVSGPVPSKVWS*EGIQGRCASDNAGG Trigger: TCCTCCAGCATTATCCGACGCACATCTTCCCTGGATACCCTCGCAGCTCCATACCTTGCTGGGCACTGGCCCCGAGACATTCGTGGGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 90 bp | GTGATGGGGCCAGCGGGAACGAGCGTGCTCTTTGGAGCAGGAGCCTaGCTCTGGTTAATAGCTGCATGGTTGCCATGGAATGGAGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: VMGPAGTSVLFGAGA*LWLIAAWLPWNGDC Trigger: GCAGTCTCCATTCCATGGCAACCATGCAGCTATTAACCAGAGCCAGGCTCCTGCTCCAAAGAGCACGCTCGTTCCCGCTGGCCCCATCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 90 bp | ACCAGACGACTTGGTGATGGGGCCAGCGGGAACGAGCGTGCTCTTTaGAGCAGGAGCCTGGCTCTGGTTAATAGCTGCATGGTTGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: TRRLGDGASGNERAL*SRSLALVNSCMVAM Trigger: CATGGCAACCATGCAGCTATTAACCAGAGCCAGGCTCCTGCTCCAAAGAGCACGCTCGTTCCCGCTGGCCCCATCACCAAGTCGTCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CAA 90 bp | CCCTTCAGATCAACTCAACAGACTGCCAGCTGCCTTTCTTCTGTACTTCTGATACCTCCGTTGCCTCCGTaGTTGCCGCCGCCGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PFRSTQQTASCLSSVLLIPPLPP*LPPPPP Trigger: CGGCGGCGGCGGCGGCAACAACGGAGGCAACGGAGG...TATCAGAAGTACAGAAGAAAGGCAGCTGGCAGTCTGTTGAGTTGATCTGAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS TCA 90 bp | GAGGGTATCCAGGGAAGATGTGCGTCGGATAATGCTGGAGGAGCTTaGGGAAGGCGGGTGTGTTTTGTCACCTGCTTTGCACACCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: EGIQGRCASDNAGGA*GRRVCFVTCFAHRG Trigger: GCCCCGGTGTGCAAAGCAGGTGACAAAACACACCCGCCTTCCTCAAGCTCCTCCAGCATTATCCGACGCACATCTTCCCTGGATACCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 90 bp | GGGCCAGCGGGAACGAGCGTGCTCTTTGGAGCAGGAGCCTGGCTCTaGTTAATAGCTGCATGGTTGCCATGGAATGGAGACTGCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GPAGTSVLFGAGAWL*LIAAWLPWNGDCLS Trigger: AGAAAGGCAGTCTCCATTCCATGGCAACCATGCAGCTATTAACCAGAGCCAGGCTCCTGCTCCAAAGAGCACGCTCGTTCCCGCTGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 90 bp | GCTGCTGCTTCTCTGTGCGAGGGGCGGAGGCGCACGATGACCATCTaGAATATCTTGTGGAATCAGCTGTTCTTCCTTCTCCCCCGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AAASLCEGRRRTMTI*NILWNQLFFLLPRL Trigger: GAGACGGGGGAGAAGGAAGAACAGCTGATTCCACAAGATATTCCAGATGGTCATCGTGCGCCTCCGCCCCTCGCACAGAGAAGCAGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS TCA 90 bp | CTGCCTTCATTAGAGATGGTGAGGAAGGATGTTGGGGACACAGACTaGGAGCGGCTGCTGTTGTTGCTTCCCTTGTCTGCACCCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPSLEMVRKDVGDTD*ERLLLLLPLSAPPG Trigger: CCCTGGGGGTGCAGACAAGGGAAGCAACAACAGCAGCCGCTCTCAGTCTGTGTCCCCAACATCCTTCCTCACCATCTCTAATGAAGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS TCA 90 bp | GGCTGGAGCAAAGTGGTGGTCATGCCAGTGGTGACGGTCAGGCTGTaGCCAGAGCCCTTGAGAGTAAGATCTGGTGTAGGGAGAAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GWSKVVVMPVVTVRL*PEPLRVRSGVGRSG Trigger: ACCACTTCTCCCTACACCAGATCTTACTCTCAAGGGCTCTGGTCACAGCCTGACCGTCACCACTGGCATGACCACCACTTTGCTCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS TCA 90 bp | CTTCGTGTGCTGCTGCTTCTCTGTGCGAGGGGCGGAGGCGCACGATaGCCATCTGGAATATCTTGTGGAATCAGCTGTTCTTCCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRVLLLLCARGGGAR*PSGISCGISCSSFS Trigger: GGAGAAGGAAGAACAGCTGATTCCACAAGATATTCCAGATGGTCATCGTGCGCCTCCGCCCCTCGCACAGAGAAGCAGCAGCACACGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 90 bp | GGGGCTCTCCTCACTGCCTTCATTAGAGATGGTGAGGAAGGATGTTaGGGACACAGACTGAGAGCGGCTGCTGTTGTTGCTTCCCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GALLTAFIRDGEEGC*GHRLRAAAVVASLV Trigger: GACAAGGGAAGCAACAACAGCAGCCGCTCTCAGTCTGTGTCCCCAACATCCTTCCTCACCATCTCTAATGAAGGCAGTGAGGAGAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CAA 90 bp | AATTCGCCTTCAAAATTGTGGCCCTCTCATGCAGGGTTTGCCATCTACCTGTTGTCGGTCTGTGTGGCCTaGTCCCTCATGCAGGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: NSPSKLWPSHAGFAIYLLSVCVA*SLMQGA Trigger: CGCACCCTGCATGAGGGACAAGGCCACACAGACCGA...CAACAGGTAGATGGCAAACCCTGCATGAGAGGGCCACAATTTTGAAGGCGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 90 bp | AGTGGTGACGGTCAGGCTGTGACCAGAGCCCTTGAGAGTAAGATCTaGTGTAGGGAGAAGTGGTTTGAGGATACTCACGAGGCAGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGDGQAVTRALESKI*CREKWFEDTHEAES Trigger: GCTTTCTGCCTCGTGAGTATCCTCAAACCACTTCTCCCTACACCAGATCTTACTCTCAAGGGCTCTGGTCACAGCCTGACCGTCACCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CAA 90 bp | CCCTTCAGATCAACTCAACAGACTGCCAGCTGCCTTTCTTCTGTACTTCTGATAGTTTTGTCACCTGCTTaGCACACCGGGGCGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PFRSTQQTASCLSSVLLIVLSPA*HTGALG Trigger: CCCCAGCGCCCCGGTGTGCAAAGCAGGTGACAAAAC...TATCAGAAGTACAGAAGAAAGGCAGCTGGCAGTCTGTTGAGTTGATCTGAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CAA 90 bp | TGGCCTTCATGCGCAGGGCAGAACACTCAGAGGACCACTAGTTCTTCCAGGAGCTTAATAGCTGCATGGTaGCCATGGAATGGAGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: WPSCAGQNTQRTTSSSRSLIAAW*PWNGDC Trigger: GCAGTCTCCATTCCATGGCAACCATGCAGCTATTAA...GCTCCTGGAAGAACTAGTGGTCCTCTGAGTGTTCTGCCCTGCGCATGAAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS GCA 90 bp | AACGAGCGTGCTCTTTGGAGCAGGAGCCTGGCTCTGGTTAATAGCTaGATGGTTGCCATGGAATGGAGACTGCCTTTCTTTATCTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NERALWSRSLALVNS*MVAMEWRLPFFISV Trigger: CACCGAGATAAAGAAAGGCAGTCTCCATTCCATGGCAACCATGCAGCTATTAACCAGAGCCAGGCTCCTGCTCCAAAGAGCACGCTCGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 90 bp | GCTGTGACCAGAGCCCTTGAGAGTAAGATCTGGTGTAGGGAGAAGTaGTTTGAGGATACTCACGAGGCAGAAAGCAGAGCCACTTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: AVTRALESKIWCREK*FEDTHEAESRATFR Trigger: CCTAAAAGTGGCTCTGCTTTCTGCCTCGTGAGTATCCTCAAACCACTTCTCCCTACACCAGATCTTACTCTCAAGGGCTCTGGTCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CAA 90 bp | ATACTTGGTTCAATGCATTACCTATCAATTCTTACTTGGGAGAAGAACAGTCATGGCGTGGGAGACCCATaGCGCCTCACCCGCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ILGSMHYLSILTWEKNSHGVGDP*RLTRWD Trigger: GTCCCAGCGGGTGAGGCGCAATGGGTCTCCCACGCC...ATGACTGTTCTTCTCCCAAGTAAGAATTGATAGGTAATGCATTGAACCAAGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS TCA 90 bp | GCATGGTTGCCATGGAATGGAGACTGCCTTTCTTTATCTCGGTGGTaGCGACTGCTGTGTTTGCTTCTCTGCAGTTGCTGGCGTAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: AWLPWNGDCLSLSRW*RLLCLLLCSCWRNF Trigger: AAAATTACGCCAGCAACTGCAGAGAAGCAAACACAGCAGTCGTCACCACCGAGATAAAGAAAGGCAGTCTCCATTCCATGGCAACCATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS TCA 90 bp | GTTTCCATTCTCTTTATCTCTGGGATCCGCAAGCAGATCATCAGCTaGACAGGGGCTCTCCTCACTGCCTTCATTAGAGATGGTGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VSILFISGIRKQIIS*TGALLTAFIRDGEE Trigger: TTCCTCACCATCTCTAATGAAGGCAGTGAGGAGAGCCCCTGTTCAGCTGATGATCTGCTTGCGGATCCCAGAGATAAAGAGAATGGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS GCA 90 bp | TGCCATGGAATGGAGACTGCCTTTCTTTATCTCGGTGGTGACGACTaGTGTGTTTGCTTCTCTGCAGTTGCTGGCGTAATTTTGCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: CHGMETAFLYLGGDD*CVCFSAVAGVILQS Trigger: AGATTGCAAAATTACGCCAGCAACTGCAGAGAAGCAAACACAGCAGTCGTCACCACCGAGATAAAGAAAGGCAGTCTCCATTCCATGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CAA 90 bp | GAGGCAGATTTGGTTATGGTCCTAGGTCTAAGTAAGAAACACTGTAAACAAAATCGTGGGGCTGCCATGTaGCTGCTGCTGCTTCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EADLVMVLGLSKKHCKQNRGAAM*LLLLQL Trigger: CAGCTGAAGCAGCAGCAGCAACATGGCAGCCCCACG...ATTTTGTTTACAGTGTTTCTTACTTAGACCTAGGACCATAACCAAATCTGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 90 bp | TTGCATATTTTGGCAAAGGAGAATTGTTTCCATTCTCTTTATCTCTaGGATCCGCAAGCAGATCATCAGCTGAACAGGGGCTCTCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LHILAKENCFHSLYL*DPQADHQLNRGSPH Trigger: GTGAGGAGAGCCCCTGTTCAGCTGATGATCTGCTTGCGGATCCCAGAGATAAAGAGAATGGAAACAATTCTCCTTTGCCAAAATATGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CAA 90 bp | ATACTTGGTTCAATGCATTACCTATCAATTCTTACTTGGGAGAAGAACAGTCATCTGTTGTTGCTTCCCTaGTCTGCACCCCCAGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILGSMHYLSILTWEKNSHLLLLP*SAPPGV Trigger: GACCCCTGGGGGTGCAGACAAGGGAAGCAACAACAG...ATGACTGTTCTTCTCCCAAGTAAGAATTGATAGGTAATGCATTGAACCAAGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CAA 90 bp | ATACTTGGTTCAATGCATTACCTATCAATTCTTACTTGGGAGAAGAACAGTCATGAGCGGCTGCTGTTGTaGCTTCCCTTGTCTGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: ILGSMHYLSILTWEKNSHERLLL*LPLSAP Trigger: GGGTGCAGACAAGGGAAGCAACAACAGCAGCCGCTC...ATGACTGTTCTTCTCCCAAGTAAGAATTGATAGGTAATGCATTGAACCAAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CAA 90 bp | CCCCCAGTGTGTGGAATGTTGGAGAAGAAACTAGCAAAATCTGTAAGTAGCAAATCGAGATACCCGCTCTaGCTCTGTGTTTGTAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: PPVCGMLEKKLAKSVSSKSRYPL*LCVCRQ Trigger: CTGTCTACAAACACAGAGCAAGAGCGGGTATCTCGA...TTTGCTACTTACAGATTTTGCTAGTTTCTTCTCCAACATTCCACACACTGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CAA 90 bp | AATTCGCCTTCAAAATTGTGGCCCTCTCATGCAGGGTTTGCCATCTACCTGTTGGTGAGGTTGCATATTTaGGCAAAGGAGAATTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSPSKLWPSHAGFAIYLLVRLHI*AKENCF Trigger: GAAACAATTCTCCTTTGCCAAAATATGCAACCTCAC...CAACAGGTAGATGGCAAACCCTGCATGAGAGGGCCACAATTTTGAAGGCGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS-3UTR CAA 90 bp | TTTGTCAGGACAGTAAAAGGCTGGAATCTCATGAAGTTGTTTTGGCCTGTGATAGTGAGGTTGCATATTTaGGCAAAGGAGAATTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FVRTVKGWNLMKLFWPVIVRLHI*AKENCF Trigger: GAAACAATTCTCCTTTGCCAAAATATGCAACCTCAC...TATCACAGGCCAAAACAACTTCATGAGATTCCAGCCTTTTACTGTCCTGACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151630.2 |
||
| CDS CCA 72 bp | TGGACGTCACGGACGCTCCCGTCTGCGTGGCCACCGTaGGGCTGGTACGCGCCGCCGCGCTGCCGCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: WTSRTLPSAWPP*GWYAPPRCRRR Trigger: GCGGCGGCGGCAGCGCGGCGGCGCGTACCAGCCCCACGGTGGCCACGCAGACGGGAGCGTCCGTGACGTCCA 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS GCA 72 bp | GCGCTGGGGCTCCTCTTCTCCGCCGAGGGTCGGCCCTaGTCTGGGGACCTCCTCCGGTGGCGGACGCGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: ALGLLFSAEGRP*SGDLLRWRTRA Trigger: CGCCCGCGTCCGCCACCGGAGGAGGTCCCCAGAGCAGGGCCGACCCTCGGCGGAGAAGAGGAGCCCCAGCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 72 bp | CAGGCGCCGTGCCGCGCGTGGGGCTGGTACCGCGCGTaGACGTCACGGACGCTCCCGTCTGCGTGGCCACCG | + |
|
Preference number: 6 (lower is better) Translates to: QAPCRAWGWYRA*TSRTLPSAWPP Trigger: CGGTGGCCACGCAGACGGGAGCGTCCGTGACGTCCACGCGCGGTACCAGCCCCACGCGCGGCACGGCGCCTG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 72 bp | GCCGAGGGTCGGCCCTGCTCTGGGGACCTCCTCCGGTaGCGGACGCGGGCGGAGGGTGGGGCCGCAATCACC | + |
|
Preference number: 6 (lower is better) Translates to: AEGRPCSGDLLR*RTRAEGGAAIT Trigger: GGTGATTGCGGCCCCACCCTCCGCCCGCGTCCGCCACCGGAGGAGGTCCCCAGAGCAGGGCCGACCCTCGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 72 bp | GGGGCTCCTCTTCTCCGCCGAGGGTCGGCCCTGCTCTaGGGACCTCCTCCGGTGGCGGACGCGGGCGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GAPLLRRGSALL*GPPPVADAGGG Trigger: CCCTCCGCCCGCGTCCGCCACCGGAGGAGGTCCCCAGAGCAGGGCCGACCCTCGGCGGAGAAGAGGAGCCCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 72 bp | TGCTTCGGGCCCCAGGCGCCGTGCCGCGCGTGGGGCTaGTACCGCGCGTGGACGTCACGGACGCTCCCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: CFGPQAPCRAWG*YRAWTSRTLPS Trigger: AGACGGGAGCGTCCGTGACGTCCACGCGCGGTACCAGCCCCACGCGCGGCACGGCGCCTGGGGCCCGAAGCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 72 bp | GAGGACTGCTTCGGGCCCCAGGCGCCGTGCCGCGCGTaGGGCTGGTACCGCGCGTGGACGTCACGGACGCTC | + |
|
Preference number: 6 (lower is better) Translates to: EDCFGPQAPCRA*GWYRAWTSRTL Trigger: GAGCGTCCGTGACGTCCACGCGCGGTACCAGCCCCACGCGCGGCACGGCGCCTGGGGCCCGAAGCAGTCCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 72 bp | TCACCTCGCTCGGCCACAGGTGGGTGGGCGACGAACTaGGCGACGACACGGTGCCCAGCAGGGGCGGTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SPRSATGGWATN*ATTRCPAGAVA Trigger: CGCCACCGCCCCTGCTGGGCACCGTGTCGTCGCCCAGTTCGTCGCCCACCCACCTGTGGCCGAGCGAGGTGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CAA 90 bp | TCCGTTGTTGCCGCCGCCGCCGCCGCCCCGCGTGGGGCTGCCATGTaGCTGCTGCTGCTTCAGCTGGAACGGCACCGTCGCCCTCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: SVVAAAAAAPRGAAM*LLLLQLERHRRPHG Trigger: CCCATGAGGGCGACGGTGCCGTTCCAGCTGAAGCAGCAGCAGCAACATGGCAGCCCCACGCGGGGCGGCGGCGGCGGCGGCAACAACGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS GCA 72 bp | CCGCCGCCCCGCGTGGGGCTGCCATGTTGCTGCTGCTaGTTCAGCTGGAACGGCACCGTCGCCCTCATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PPPRVGLPCCCC*FSWNGTVALMG Trigger: GCCCATGAGGGCGACGGTGCCGTTCCAGCTGAAGCAGCAGCAGCAACATGGCAGCCCCACGCGGGGCGGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS GCA 72 bp | CGTTGTTGCCGCCGCCGCCGCCGCCCCGCGTGGGGCTaGCATGTTGCTGCTGCTGCTTCAGCTGGAACGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RCCRRRRRPAWG*HVAAAASAGTA Trigger: TGCCGTTCCAGCTGAAGCAGCAGCAGCAACATGGCAGCCCCACGCGGGGCGGCGGCGGCGGCGGCAACAACG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 72 bp | GAGGGTGGGGCCGCAATCACCTCGCTCGGCCACAGGTaGGTGGGCGACGAACTGGGCGACGACACGGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: EGGAAITSLGHR*VGDELGDDTVP Trigger: GGGCACCGTGTCGTCGCCCAGTTCGTCGCCCACCCACCTGTGGCCGAGCGAGGTGATTGCGGCCCCACCCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 72 bp | GTGGGGCCGCAATCACCTCGCTCGGCCACAGGTGGGTaGGCGACGAACTGGGCGACGACACGGTGCCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VGPQSPRSATGG*ATNWATTRCPA Trigger: TGCTGGGCACCGTGTCGTCGCCCAGTTCGTCGCCCACCCACCTGTGGCCGAGCGAGGTGATTGCGGCCCCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 72 bp | CGCGTGGGGCTGCCATGTTGCTGCTGCTGCTTCAGCTaGAACGGCACCGTCGCCCTCATGGGCTGCAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RVGLPCCCCCFS*NGTVALMGCRR Trigger: CCGCCTGCAGCCCATGAGGGCGACGGTGCCGTTCCAGCTGAAGCAGCAGCAGCAACATGGCAGCCCCACGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 72 bp | GGTGTGTTTTGTCACCTGCTTTGCACACCGGGGCGCTaGGGCTCCTCTTCTCCGCCGAGGGTCGGCCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GVFCHLLCTPGR*GSSSPPRVGPA Trigger: AGCAGGGCCGACCCTCGGCGGAGAAGAGGAGCCCCAGCGCCCCGGTGTGCAAAGCAGGTGACAAAACACACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS GCA 72 bp | CAGGGTGCGGCTTGCCCACGAATGTCTCGGGGCCAGTaGCCAGCAAGGTATGGAGCTGCGAGGGTATCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QGAACPRMSRGQ*PARYGAARVSR Trigger: CCTGGATACCCTCGCAGCTCCATACCTTGCTGGGCACTGGCCCCGAGACATTCGTGGGCAAGCCGCACCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS GCA 72 bp | GTCTGTGTGGCCTTGTCCCTCATGCAGGGTGCGGCTTaGCCACGAATGTCTCGGGGCCAGTGCCCAGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: VCVALSLMQGAA*PRMSRGQCPAR Trigger: CCTTGCTGGGCACTGGCCCCGAGACATTCGTGGGCAAGCCGCACCCTGCATGAGGGACAAGGCCACACAGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS GCA 72 bp | ACTCTCGGTCTGTGTGGCCTTGTCCCTCATGCAGGGTaGGGCTTGCCCACGAATGTCTCGGGGCCAGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: TLGLCGLVPHAG*GLPTNVSGPVP Trigger: GGGCACTGGCCCCGAGACATTCGTGGGCAAGCCGCACCCTGCATGAGGGACAAGGCCACACAGACCGAGAGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CAA 72 bp | GGTCTGTGTGGCCTTGTCCCTCATGCAGGGTGCGGCTaGCCCACGAATGTCTCGGGGCCAGTGCCCAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GLCGLVPHAGCG*PTNVSGPVPSK Trigger: CTTGCTGGGCACTGGCCCCGAGACATTCGTGGGCAAGCCGCACCCTGCATGAGGGACAAGGCCACACAGACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CAA 90 bp | TGCACTCTCGGTCTGTGTGGCCTTGTCCCTCATGCAGGGTGCGGCTaGCCCACGAATGTCTCGGGGCCAGTGCCCAGCAAGGTATGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CTLGLCGLVPHAGCG*PTNVSGPVPSKVWS Trigger: GCTCCATACCTTGCTGGGCACTGGCCCCGAGACATTCGTGGGCAAGCCGCACCCTGCATGAGGGACAAGGCCACACAGACCGAGAGTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 72 bp | CCCACGAATGTCTCGGGGCCAGTGCCCAGCAAGGTATaGAGCTGCGAGGGTATCCAGGGAAGATGTGCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: PTNVSGPVPSKV*SCEGIQGRCAS Trigger: CGACGCACATCTTCCCTGGATACCCTCGCAGCTCCATACCTTGCTGGGCACTGGCCCCGAGACATTCGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 72 bp | CTTGGTGATGGGGCCAGCGGGAACGAGCGTGCTCTTTaGAGCAGGAGCCTGGCTCTGGTTAATAGCTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LGDGASGNERAL*SRSLALVNSCM Trigger: CATGCAGCTATTAACCAGAGCCAGGCTCCTGCTCCAAAGAGCACGCTCGTTCCCGCTGGCCCCATCACCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CAA 72 bp | ATAATGCTGGAGGAGCTTGAGGAAGGCGGGTGTGTTTaGTCACCTGCTTTGCACACCGGGGCGCTGGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: IMLEELEEGGCV*SPALHTGALGL Trigger: GAGCCCCAGCGCCCCGGTGTGCAAAGCAGGTGACAAAACACACCCGCCTTCCTCAAGCTCCTCCAGCATTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CAA 72 bp | CCTTCCACACTGTTCCGGAACCGAGAACCAGACGACTaGGTGATGGGGCCAGCGGGAACGAGCGTGCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PSTLFRNREPDD*VMGPAGTSVLF Trigger: AAAGAGCACGCTCGTTCCCGCTGGCCCCATCACCAAGTCGTCTGGTTCTCGGTTCCGGAACAGTGTGGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS GCA 72 bp | CTGTGTGTCAATGCTTCGTGTGCTGCTGCTTCTCTGTaGGAGGGGCGGAGGCGCACGATGACCATCTGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LCVNASCAAASL*EGRRRTMTIWN Trigger: ATTCCAGATGGTCATCGTGCGCCTCCGCCCCTCGCACAGAGAAGCAGCAGCACACGAAGCATTGACACACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 72 bp | GTGGTGCATGGAGGGAGGCGGATGGCAGGACTGTACTaGTTCCTCGAGATACCCGCTCTTGCTCTGTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: VVHGGRRMAGLY*FLEIPALALCL Trigger: CAAACACAGAGCAAGAGCGGGTATCTCGAGGAACCAGTACAGTCCTGCCATCCGCCTCCCTCCATGCACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS GCA 72 bp | AATGTCTCGGGGCCAGTGCCCAGCAAGGTATGGAGCTaGGAGGGTATCCAGGGAAGATGTGCGTCGGATAAT | + |
|
Preference number: 6 (lower is better) Translates to: NVSGPVPSKVWS*EGIQGRCASDN Trigger: ATTATCCGACGCACATCTTCCCTGGATACCCTCGCAGCTCCATACCTTGCTGGGCACTGGCCCCGAGACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 72 bp | CCAGCGGGAACGAGCGTGCTCTTTGGAGCAGGAGCCTaGCTCTGGTTAATAGCTGCATGGTTGCCATGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: PAGTSVLFGAGA*LWLIAAWLPWN Trigger: ATTCCATGGCAACCATGCAGCTATTAACCAGAGCCAGGCTCCTGCTCCAAAGAGCACGCTCGTTCCCGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS TCA 72 bp | CTGCTGCTTCTCTGTGCGAGGGGCGGAGGCGCACGATaGCCATCTGGAATATCTTGTGGAATCAGCTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LLLLCARGGGAR*PSGISCGISCS Trigger: AGAACAGCTGATTCCACAAGATATTCCAGATGGTCATCGTGCGCCTCCGCCCCTCGCACAGAGAAGCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 72 bp | GGAACGAGCGTGCTCTTTGGAGCAGGAGCCTGGCTCTaGTTAATAGCTGCATGGTTGCCATGGAATGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: GTSVLFGAGAWL*LIAAWLPWNGD Trigger: GTCTCCATTCCATGGCAACCATGCAGCTATTAACCAGAGCCAGGCTCCTGCTCCAAAGAGCACGCTCGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 72 bp | TATCCTTCAGCTTCCTCAATGGGTTCTGGTGGTGCATaGAGGGAGGCGGATGGCAGGACTGTACTGGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: YPSASSMGSGGA*READGRTVLVP Trigger: AGGAACCAGTACAGTCCTGCCATCCGCCTCCCTCCATGCACCACCAGAACCCATTGAGGAAGCTGAAGGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS TCA 72 bp | CAGGGAAGATGTGCGTCGGATAATGCTGGAGGAGCTTaGGGAAGGCGGGTGTGTTTTGTCACCTGCTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: QGRCASDNAGGA*GRRVCFVTCFA Trigger: TGCAAAGCAGGTGACAAAACACACCCGCCTTCCTCAAGCTCCTCCAGCATTATCCGACGCACATCTTCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS GCA 72 bp | GGCAGGACTGTACTGGTTCCTCGAGATACCCGCTCTTaGTCTGTGTTTGTAGACAGGGAGGCCATAGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: GRTVLVPRDTRS*SVFVDREAIEM Trigger: CATCTCTATGGCCTCCCTGTCTACAAACACAGAGCAAGAGCGGGTATCTCGAGGAACCAGTACAGTCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 72 bp | TCTCTGTGCGAGGGGCGGAGGCGCACGATGACCATCTaGAATATCTTGTGGAATCAGCTGTTCTTCCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SLCEGRRRTMTI*NILWNQLFFLL Trigger: GAGAAGGAAGAACAGCTGATTCCACAAGATATTCCAGATGGTCATCGTGCGCCTCCGCCCCTCGCACAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS TCA 72 bp | TTAGAGATGGTGAGGAAGGATGTTGGGGACACAGACTaGGAGCGGCTGCTGTTGTTGCTTCCCTTGTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LEMVRKDVGDTD*ERLLLLLPLSA Trigger: TGCAGACAAGGGAAGCAACAACAGCAGCCGCTCTCAGTCTGTGTCCCCAACATCCTTCCTCACCATCTCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 72 bp | CTCACTGCCTTCATTAGAGATGGTGAGGAAGGATGTTaGGGACACAGACTGAGAGCGGCTGCTGTTGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LTAFIRDGEEGC*GHRLRAAAVVA Trigger: AGCAACAACAGCAGCCGCTCTCAGTCTGTGTCCCCAACATCCTTCCTCACCATCTCTAATGAAGGCAGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 72 bp | GGTCAGGCTGTGACCAGAGCCCTTGAGAGTAAGATCTaGTGTAGGGAGAAGTGGTTTGAGGATACTCACGAG | + |
|
Preference number: 6 (lower is better) Translates to: GQAVTRALESKI*CREKWFEDTHE Trigger: CTCGTGAGTATCCTCAAACCACTTCTCCCTACACCAGATCTTACTCTCAAGGGCTCTGGTCACAGCCTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS TCA 72 bp | CCATGGAATGGAGACTGCCTTTCTTTATCTCGGTGGTaGCGACTGCTGTGTTTGCTTCTCTGCAGTTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PWNGDCLSLSRW*RLLCLLLCSCW Trigger: CCAGCAACTGCAGAGAAGCAAACACAGCAGTCGTCACCACCGAGATAAAGAAAGGCAGTCTCCATTCCATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS GCA 72 bp | GCTCTTTGGAGCAGGAGCCTGGCTCTGGTTAATAGCTaGATGGTTGCCATGGAATGGAGACTGCCTTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ALWSRSLALVNS*MVAMEWRLPFF Trigger: AAAGAAAGGCAGTCTCCATTCCATGGCAACCATGCAGCTATTAACCAGAGCCAGGCTCCTGCTCCAAAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CCA 72 bp | AGAGCCCTTGAGAGTAAGATCTGGTGTAGGGAGAAGTaGTTTGAGGATACTCACGAGGCAGAAAGCAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RALESKIWCREK*FEDTHEAESRA Trigger: GGCTCTGCTTTCTGCCTCGTGAGTATCCTCAAACCACTTCTCCCTACACCAGATCTTACTCTCAAGGGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
||
| CDS CAA 72 bp | CCCTTGAGAGTAAGATCTGGTGTAGGGAGAAGTGGTTaGAGGATACTCACGAGGCAGAAAGCAGAGCCACTT | + |
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Preference number: 6 (lower is better) Translates to: PLRVRSGVGRSG*RILTRQKAEPL Trigger: AAGTGGCTCTGCTTTCTGCCTCGTGAGTATCCTCAAACCACTTCTCCCTACACCAGATCTTACTCTCAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| CDS GCA 72 bp | ATGGAGACTGCCTTTCTTTATCTCGGTGGTGACGACTaGTGTGTTTGCTTCTCTGCAGTTGCTGGCGTAATT | + |
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Preference number: 6 (lower is better) Translates to: METAFLYLGGDD*CVCFSAVAGVI Trigger: AATTACGCCAGCAACTGCAGAGAAGCAAACACAGCAGTCGTCACCACCGAGATAAAGAAAGGCAGTCTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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| CDS CCA 72 bp | TTGGCAAAGGAGAATTGTTTCCATTCTCTTTATCTCTaGGATCCGCAAGCAGATCATCAGCTGAACAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: LAKENCFHSLYL*DPQADHQLNRG Trigger: GCCCCTGTTCAGCTGATGATCTGCTTGCGGATCCCAGAGATAAAGAGAATGGAAACAATTCTCCTTTGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036540.12 |
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