Pregenerated sensors for FAM114A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029185Ensembl transcript IDs: ENSMUST00000031080.15, ENSMUST00000139366.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACAGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCTCCCTaGAAGGTCTCTGATGCATCTCCCTGGATCAGCACCCCACTTGGC | + |
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Preference number: 1 (lower is better) Translates to: NRCISQEPRFSTTAP*KVSDASPWISTPLG Trigger: GCCAAGTGGGGTGCTGATCCAGGGAGATGCATCAGAGACCTTGCAGGGAGCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| 3UTR TCA 90 bp | TTCAAGACTGCAGGCATCATTTGCCCTGGGATAAGCCACTGGGCATaGCTATTTTGGACACTACTGGTAGGGATGTCAGTGATGGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: FKTAGIICPGISHWA*LFWTLLVGMSVMVS Trigger: TGAGACCATCACTGACATCCCTACCAGTAGTGTCCAAAATAGTCATGCCCAGTGGCTTATCCCAGGGCAAATGATGCCTGCAGTCTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| 3UTR CCA 90 bp | AGGAGGGATTTTTCTCCCTTTCAAGACTGCAGGCATCATTTGCCCTaGGATAAGCCACTGGGCATGACTATTTTGGACACTACTGGTAGG | + |
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Preference number: 1 (lower is better) Translates to: RRDFSPFQDCRHHLP*DKPLGMTILDTTGR Trigger: CCTACCAGTAGTGTCCAAAATAGTCATGCCCAGTGGCTTATCCCAGGGCAAATGATGCCTGCAGTCTTGAAAGGGAGAAAAATCCCTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| 3UTR GCA 90 bp | CTTCTACCACAGGAACAAAGGAGGGATTTTTCTCCCTTTCAAGACTaGAGGCATCATTTGCCCTGGGATAAGCCACTGGGCATGACTATT | + |
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Preference number: 1 (lower is better) Translates to: LLPQEQRRDFSPFQD*RHHLPWDKPLGMTI Trigger: AATAGTCATGCCCAGTGGCTTATCCCAGGGCAAATGATGCCTGCAGTCTTGAAAGGGAGAAAAATCCCTCCTTTGTTCCTGTGGTAGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| 3UTR CCA 90 bp | ACACAGTCACACAAAAATGCTACTGAGAGAATTCAGATATCTACTTaGCCCACAGGGGACAGACGCAGTGGCTTCTACCACAGGAACAAA | + |
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Preference number: 1 (lower is better) Translates to: TQSHKNATERIQIST*PTGDRRSGFYHRNK Trigger: TTTGTTCCTGTGGTAGAAGCCACTGCGTCTGTCCCCTGTGGGCCAAGTAGATATCTGAATTCTCTCAGTAGCATTTTTGTGTGACTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| 3UTR-3UTR TCA 90 bp | GAGAGAATTCAGATATCTACTTGGCCCACAGGGGACAGACGCAGTGGCTTCTACTCCCTGCAAGGTCTCTaGTGCATCTCCCTGGATCAG | + |
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Preference number: 2 (lower is better) Translates to: ERIQISTWPTGDRRSGFYSLQGL*CISLDQ Trigger: CTGATCCAGGGAGATGCATCAGAGACCTTGCAGGGA...GTAGAAGCCACTGCGTCTGTCCCCTGTGGGCCAAGTAGATATCTGAATTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| 3UTR-3UTR CCA 90 bp | AAGAACAGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCTCCCTGCAAGTCTGATGCATCTCCCTaGATCAGCACCCCACTTGGC | + |
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Preference number: 2 (lower is better) Translates to: KNRCISQEPRFSTTAPCKSDASP*ISTPLG Trigger: GCCAAGTGGGGTGCTGATCCAGGGAGATGCATCAGA...CTTGCAGGGAGCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCTGTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGAAAGAACAGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCTCCTTTAGTCCTAGTTCTTaGGAGGCAGAGGCAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: AWKEQMHLTRAQVQYHCSFSPSS*EAEAGR Trigger: TCTGCCTGCCTCTGCCTCCCAAGAACTAGGACTAAA...GGAGCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCTGTTCTTTCCAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| 3UTR-3UTR CCA 90 bp | GAGAGAATTCAGATATCTACTTGGCCCACAGGGGACAGACGCAGTGGCTTCTACCAGAGAACCTCAGCCTaGAAAGAACAGATGCATCTC | + |
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Preference number: 2 (lower is better) Translates to: ERIQISTWPTGDRRSGFYQRTSA*KEQMHL Trigger: GAGATGCATCTGTTCTTTCCAGGCTGAGGTTCTCTG...GTAGAAGCCACTGCGTCTGTCCCCTGTGGGCCAAGTAGATATCTGAATTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| 3UTR CAA 90 bp | TGCAGGCATCATTTGCCCTGGGATAAGCCACTGGGCATGACTATTTaGGACACTACTGGTAGGGATGTCAGTGATGGTCTCAAACAGAAG | + |
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Preference number: 2 (lower is better) Translates to: CRHHLPWDKPLGMTI*DTTGRDVSDGLKQK Trigger: CTTCTGTTTGAGACCATCACTGACATCCCTACCAGTAGTGTCCAAAATAGTCATGCCCAGTGGCTTATCCCAGGGCAAATGATGCCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| 3UTR-3UTR TCA 90 bp | AAGAACAGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCTCCCTGCAAGGTTAGTGGGTATTTTTaGAATGCAGGTCGGGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: KNRCISQEPRFSTTAPCKVSGYF*NAGRGF Trigger: GAAACCCCGACCTGCATTTCAAAAATACCCACTAAC...CTTGCAGGGAGCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCTGTTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| 3UTR CAA 90 bp | GAACAAAGGAGGGATTTTTCTCCCTTTCAAGACTGCAGGCATCATTaGCCCTGGGATAAGCCACTGGGCATGACTATTTTGGACACTACT | + |
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Preference number: 2 (lower is better) Translates to: EQRRDFSPFQDCRHH*PWDKPLGMTILDTT Trigger: AGTAGTGTCCAAAATAGTCATGCCCAGTGGCTTATCCCAGGGCAAATGATGCCTGCAGTCTTGAAAGGGAGAAAAATCCCTCCTTTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| 3UTR-3UTR GCA 90 bp | CCTGGAAAGAACAGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCTCCCACTCATTTAAAGCCATaGTTGAGAAAAATAGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: PGKNRCISQEPRFSTTAPTHLKP*LRKIGH Trigger: ATGCCCTATTTTTCTCAAGCATGGCTTTAAATGAGT...GGGAGCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCTGTTCTTTCCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| 3UTR GCA 72 bp | ATCTCACAAGAGCCCAGGTTCAGTACCACTGCTCCCTaGAAGGTCTCTGATGCATCTCCCTGGATCAGCACC | + |
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Preference number: 3 (lower is better) Translates to: ISQEPRFSTTAP*KVSDASPWIST Trigger: GGTGCTGATCCAGGGAGATGCATCAGAGACCTTGCAGGGAGCAGTGGTACTGAACCTGGGCTCTTGTGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| 3UTR TCA 72 bp | GCAGGCATCATTTGCCCTGGGATAAGCCACTGGGCATaGCTATTTTGGACACTACTGGTAGGGATGTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: AGIICPGISHWA*LFWTLLVGMSV Trigger: CACTGACATCCCTACCAGTAGTGTCCAAAATAGTCATGCCCAGTGGCTTATCCCAGGGCAAATGATGCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| 3UTR GCA 72 bp | CAGGAACAAAGGAGGGATTTTTCTCCCTTTCAAGACTaGAGGCATCATTTGCCCTGGGATAAGCCACTGGGC | + |
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Preference number: 3 (lower is better) Translates to: QEQRRDFSPFQD*RHHLPWDKPLG Trigger: GCCCAGTGGCTTATCCCAGGGCAAATGATGCCTGCAGTCTTGAAAGGGAGAAAAATCCCTCCTTTGTTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| 3UTR CCA 72 bp | TGGTCTCAAACAGAAGCATGCCAGAGAACCTCAGCCTaGAAAGAACAGATGCATCTCACAAGAGCCCAGGTT | + |
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Preference number: 3 (lower is better) Translates to: WSQTEACQRTSA*KEQMHLTRAQV Trigger: AACCTGGGCTCTTGTGAGATGCATCTGTTCTTTCCAGGCTGAGGTTCTCTGGCATGCTTCTGTTTGAGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| 3UTR CCA 72 bp | TCAGATATCTACTTGGCCCACAGGGGACAGACGCAGTaGCTTCTACCACAGGAACAAAGGAGGGATTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: SDIYLAHRGQTQ*LLPQEQRRDFS Trigger: AGAAAAATCCCTCCTTTGTTCCTGTGGTAGAAGCCACTGCGTCTGTCCCCTGTGGGCCAAGTAGATATCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| 3UTR-3UTR CAA 90 bp | TTGGCCCACAGGGGACAGACGCAGTGGCTTCTACCACAGGAACAAAGGAGGGATCATTTAAAGCCATGCTaGAGAAAAATAGGGCATAGA | + |
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Preference number: 3 (lower is better) Translates to: LAHRGQTQWLLPQEQRRDHLKPC*RKIGHR Trigger: TCTATGCCCTATTTTTCTCAAGCATGGCTTTAAATG...ATCCCTCCTTTGTTCCTGTGGTAGAAGCCACTGCGTCTGTCCCCTGTGGGCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| 3UTR CCA 72 bp | CACAAAAATGCTACTGAGAGAATTCAGATATCTACTTaGCCCACAGGGGACAGACGCAGTGGCTTCTACCAC | + |
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Preference number: 3 (lower is better) Translates to: HKNATERIQIST*PTGDRRSGFYH Trigger: GTGGTAGAAGCCACTGCGTCTGTCCCCTGTGGGCCAAGTAGATATCTGAATTCTCTCAGTAGCATTTTTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| 3UTR-3UTR CAA 90 bp | GCCTGGAAAGAACAGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCTCCCTCAGCTTTATAATTTaGCCACCAAACACTCTAAAC | + |
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Preference number: 3 (lower is better) Translates to: AWKEQMHLTRAQVQYHCSLSFII*PPNTLN Trigger: GTTTAGAGTGTTTGGTGGCAAAATTATAAAGCTGAG...GGAGCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCTGTTCTTTCCAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| 3UTR CCA 72 bp | TTTTCTCCCTTTCAAGACTGCAGGCATCATTTGCCCTaGGATAAGCCACTGGGCATGACTATTTTGGACACT | + |
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Preference number: 3 (lower is better) Translates to: FSPFQDCRHHLP*DKPLGMTILDT Trigger: AGTGTCCAAAATAGTCATGCCCAGTGGCTTATCCCAGGGCAAATGATGCCTGCAGTCTTGAAAGGGAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CCA 90 bp | CTGCTCCCTGCAAGGTCTCTGATGCATCTCCCTGGATCAGCACCCCACTTGGCCCGACCCTGCCGCCCCTaGTGGAGGAGGAGTGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LLPARSLMHLPGSAPHLARPCRP*WRRSVG Trigger: CCCCACACTCCTCCTCCACCAGGGGCGGCAGGGTCG...GGCCAAGTGGGGTGCTGATCCAGGGAGATGCATCAGAGACCTTGCAGGGAGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CCA 90 bp | CTCAAACAGAAGCATGCCAGAGAACCTCAGCCTGGAAAGAACAGATGCATCTCACCCTGCCGCCCCTGGTaGAGGAGGAGTGTGGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LKQKHAREPQPGKNRCISPCRPW*RRSVGA Trigger: GGCCCCCACACTCCTCCTCCACCAGGGGCGGCAGGG...TGAGATGCATCTGTTCTTTCCAGGCTGAGGTTCTCTGGCATGCTTCTGTTTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CCA 90 bp | AGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCTCCCTGCAAGGTCTCTGAGTGTGGGGGCCTCTaGCAGGGTCCTGATCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: RCISQEPRFSTTAPCKVSECGGL*QGPDLE Trigger: CTCCAGATCAGGACCCTGCCAGAGGCCCCCACACTC...AGAGACCTTGCAGGGAGCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR TCA 90 bp | CTGCTCCCTGCAAGGTCTCTGATGCATCTCCCTGGATCAGCACCCCACTTGGCCTCTTCATGGCCTTATTaGGTTTGTCAGGTGTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: LLPARSLMHLPGSAPHLASSWPY*VCQVWR Trigger: CCGCCACACCTGACAAACTCAATAAGGCCATGAAGA...GGCCAAGTGGGGTGCTGATCCAGGGAGATGCATCAGAGACCTTGCAGGGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR GCA 90 bp | TTGGCCCACAGGGGACAGACGCAGTGGCTTCTACCACAGGAACAAAGGAGGGATGGCCCCTTCGGGAGATaGAGAATTGGCACTGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: LAHRGQTQWLLPQEQRRDGPFGR*RIGTVD Trigger: ATCCACAGTGCCAATTCTGCATCTCCCGAAGGGGCC...ATCCCTCCTTTGTTCCTGTGGTAGAAGCCACTGCGTCTGTCCCCTGTGGGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CCA 90 bp | CTGCTCCCTGCAAGGTCTCTGATGCATCTCCCTGGATCAGCACCCCACTTGGCCCGACTCCATTGGCTATaGTGTCACGAGCATCATCAG | + |
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Preference number: 4 (lower is better) Translates to: LLPARSLMHLPGSAPHLARLHWL*CHEHHQ Trigger: CTGATGATGCTCGTGACACCATAGCCAATGGAGTCG...GGCCAAGTGGGGTGCTGATCCAGGGAGATGCATCAGAGACCTTGCAGGGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR TCA 90 bp | CTGCTCCCTGCAAGGTCTCTGATGCATCTCCCTGGATCAGCACCCCACTTGGCCACTGCTGTTAATCCATaGCCTACTGTGGCTGATGCA | + |
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Preference number: 4 (lower is better) Translates to: LLPARSLMHLPGSAPHLATAVNP*PTVADA Trigger: TGCATCAGCCACAGTAGGTCATGGATTAACAGCAGT...GGCCAAGTGGGGTGCTGATCCAGGGAGATGCATCAGAGACCTTGCAGGGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR TCA 90 bp | TGCCAGAGAACCTCAGCCTGGAAAGAACAGATGCATCTCACAAGAGCCCAGGTTCAGTCCTCTCCACTGTaGGCTGCTGGGCCAACCTCT | + |
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Preference number: 4 (lower is better) Translates to: CQRTSAWKEQMHLTRAQVQSSPL*AAGPTS Trigger: AGAGGTTGGCCCAGCAGCTCACAGTGGAGAGGACTG...AACCTGGGCTCTTGTGAGATGCATCTGTTCTTTCCAGGCTGAGGTTCTCTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR TCA 90 bp | AGCCCAGGTTCAGTACCACTGCTCCCTGCAAGGTCTCTGATGCATCTCCCTGGAACTCTTGCTTGGTCTTaGGCTGGTTTCTCCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SPGSVPLLPARSLMHLPGTLAWS*AGFSSS Trigger: AGAGGAGGAGAAACCAGCTCAAGACCAAGCAAGAGT...TCCAGGGAGATGCATCAGAGACCTTGCAGGGAGCAGTGGTACTGAACCTGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CCA 90 bp | AAGAACAGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCTCCCTGCAAGTCCACTGTGAGCTGCTaGGCCAACCTCTGCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: KNRCISQEPRFSTTAPCKSTVSC*ANLCFS Trigger: GGAGAAGCAGAGGTTGGCCCAGCAGCTCACAGTGGA...CTTGCAGGGAGCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCTGTTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR GCA 90 bp | GCCTGGAAAGAACAGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCTCCCTTTCAAACAGCTGGTaGGGATGTGGGAGACCTGCA | + |
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Preference number: 4 (lower is better) Translates to: AWKEQMHLTRAQVQYHCSLSNSW*GCGRPA Trigger: TGCAGGTCTCCCACATCCGCACCAGCTGTTTGAAAG...GGAGCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCTGTTCTTTCCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CCA 90 bp | AAGAACAGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCTCCCTGCAAGCGGCAGCACTGGCCTTaGATTGGTCTAGAATCCCTG | + |
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Preference number: 4 (lower is better) Translates to: KNRCISQEPRFSTTAPCKRQHWP*IGLESL Trigger: CAGGGATTCTAGACCAATCCAAGGCCAGTGCTGCCG...CTTGCAGGGAGCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCTGTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CCA 90 bp | AGCCCAGGTTCAGTACCACTGCTCCCTGCAAGGTCTCTGATGCATCTCCCTGGAGCTTCTCTCAACATCTaGGACAAGGAGACAGTTCGT | + |
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Preference number: 4 (lower is better) Translates to: SPGSVPLLPARSLMHLPGASLNI*DKETVR Trigger: ACGAACTGTCTCCTTGTCCCAGATGTTGAGAGAAGC...TCCAGGGAGATGCATCAGAGACCTTGCAGGGAGCAGTGGTACTGAACCTGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR TCA 90 bp | TGCCAGAGAACCTCAGCCTGGAAAGAACAGATGCATCTCACAAGAGCCCAGGTTTTTGAACCACATTGGTaGGGGCTGACAGCATGCCTC | + |
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Preference number: 4 (lower is better) Translates to: CQRTSAWKEQMHLTRAQVFEPHW*GLTACL Trigger: GAGGCATGCTGTCAGCCCTCACCAATGTGGTTCAAA...AACCTGGGCTCTTGTGAGATGCATCTGTTCTTTCCAGGCTGAGGTTCTCTGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CCA 90 bp | TTTCGTGTGCACACCTTTAGTCCTAGTTCTTGGGAGGCAGAGGCAGGCAGATCTCAGGGGAGTCACTGTTaGGCATCTCAGCAGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: FRVHTFSPSSWEAEAGRSQGSHC*ASQQHL Trigger: AAGATGCTGCTGAGATGCCCAACAGTGACTCCCCTG...AGATCTGCCTGCCTCTGCCTCCCAAGAACTAGGACTAAAGGTGTGCACACGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CCA 90 bp | TCAGCCTGGAAAGAACAGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCGGCTGCTCTTCCATGTaGTCATCTGGTGCTGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: SAWKEQMHLTRAQVQYHCGCSSM*SSGAGS Trigger: TGAACCAGCACCAGATGACCACATGGAAGAGCAGCC...GCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCTGTTCTTTCCAGGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CCA 90 bp | TTTCGTGTGCACACCTTTAGTCCTAGTTCTTGGGAGGCAGAGGCAGGCAGATCTCGGGAGATGCAGAATTaGCACTGTGGATTCGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: FRVHTFSPSSWEAEAGRSREMQN*HCGFVG Trigger: CCCTACGAATCCACAGTGCCAATTCTGCATCTCCCG...AGATCTGCCTGCCTCTGCCTCCCAAGAACTAGGACTAAAGGTGTGCACACGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CCA 90 bp | AGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCTCCCTGCAAGGTCTCTTGCTTGGTCTTGAGCTaGTTTCTCCTCCTCTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: RCISQEPRFSTTAPCKVSCLVLS*FLLLLS Trigger: GGACAAGAGGAGGAGAAACCAGCTCAAGACCAAGCA...AGAGACCTTGCAGGGAGCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CCA 90 bp | GCCTGGAAAGAACAGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCTCCCGTCCTGCACATATGTaGTGCTATTGGAGCCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: AWKEQMHLTRAQVQYHCSRPAHM*CYWSPL Trigger: TAGAGGGCTCCAATAGCACCACATATGTGCAGGACG...GGAGCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCTGTTCTTTCCAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR TCA 90 bp | GCCTGGAAAGAACAGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCTCCTGGTGCTGGTTCATTTaGAGTTGTAGCTGGACCACA | + |
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Preference number: 4 (lower is better) Translates to: AWKEQMHLTRAQVQYHCSWCWFI*SCSWTT Trigger: TGTGGTCCAGCTACAACTTCAAATGAACCAGCACCA...GGAGCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCTGTTCTTTCCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR GCA 90 bp | TGCCAGAGAACCTCAGCCTGGAAAGAACAGATGCATCTCACAAGAGCCCAGGTTGCTGTGATCTCAGGCTaGTCTTCCATGTGGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: CQRTSAWKEQMHLTRAQVAVISG*SSMWSS Trigger: AGATGACCACATGGAAGAGCAGCCTGAGATCACAGC...AACCTGGGCTCTTGTGAGATGCATCTGTTCTTTCCAGGCTGAGGTTCTCTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CCA 90 bp | GAGAGAATTCAGATATCTACTTGGCCCACAGGGGACAGACGCAGTGGCTTCTACGGCAGGGTCCTGATCTaGAGTCACATTTCCAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: ERIQISTWPTGDRRSGFYGRVLI*SHISRD Trigger: ATCTCTGGAAATGTGACTCCAGATCAGGACCCTGCC...GTAGAAGCCACTGCGTCTGTCCCCTGTGGGCCAAGTAGATATCTGAATTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CCA 90 bp | GCCTGGAAAGAACAGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCTCCACAGTCTTAGCTCCTTaGCCCCCTGTTTTGTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: AWKEQMHLTRAQVQYHCSTVLAP*PPVLSS Trigger: AGAAGACAAAACAGGGGGCCAAGGAGCTAAGACTGT...GGAGCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCTGTTCTTTCCAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR GCA 90 bp | GCCTGGAAAGAACAGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCTCCCCTGCACATATGTGGTaGTATTGGAGCCCTCTAAAA | + |
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Preference number: 4 (lower is better) Translates to: AWKEQMHLTRAQVQYHCSPAHMW*YWSPLK Trigger: TTTTAGAGGGCTCCAATAGCACCACATATGTGCAGG...GGAGCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCTGTTCTTTCCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CCA 90 bp | TTCTTGGGAGGCAGAGGCAGGCAGATCTTTGTGAGTTTTAGGCTAGCCTGGTCTATCCATGACCTACTGTaGCTGATGCAGATGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLGGRGRQIFVSFRLAWSIHDLL*LMQMRA Trigger: TGCTCTCATCTGCATCAGCCACAGTAGGTCATGGAT...AGACCAGGCTAGCCTAAAACTCACAAAGATCTGCCTGCCTCTGCCTCCCAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CCA 90 bp | AGTCACACAAAAATGCTACTGAGAGAATTCAGATATCTACTTGGCCCACAGGGGGGTCCGCTTAAACCCTaGGTCGCTTTCTGCGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SHTKMLLREFRYLLGPQGGPLKP*VAFCED Trigger: GTCCTCGCAGAAAGCGACCCAGGGTTTAAGCGGACC...CCCCTGTGGGCCAAGTAGATATCTGAATTCTCTCAGTAGCATTTTTGTGTGACT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
||
| CDS-3UTR CCA 90 bp | TGCCAGAGAACCTCAGCCTGGAAAGAACAGATGCATCTCACAAGAGCCCAGGTTTCCTCCTCTTGTCCATaGAGAATCAACTCTGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: CQRTSAWKEQMHLTRAQVSSSCP*RINSAT Trigger: GGTTGCAGAGTTGATTCTCCATGGACAAGAGGAGGA...AACCTGGGCTCTTGTGAGATGCATCTGTTCTTTCCAGGCTGAGGTTCTCTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CCA 90 bp | CTGCTCCCTGCAAGGTCTCTGATGCATCTCCCTGGATCAGCACCCCACTTGGCCCATTGCACATTGCTGTaGTTAATTTTATCAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: LLPARSLMHLPGSAPHLAHCTLL*LILSEL Trigger: GAGTTCTGATAAAATTAACCACAGCAATGTGCAATG...GGCCAAGTGGGGTGCTGATCCAGGGAGATGCATCAGAGACCTTGCAGGGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR TCA 90 bp | AAGAACAGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCTCCCTGCAAGGATGTTAAGAAGGACTaGACCTTGCTCTCACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KNRCISQEPRFSTTAPCKDVKKD*TLLSLS Trigger: TGAGAGTGAGAGCAAGGTTCAGTCCTTCTTAACATC...CTTGCAGGGAGCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCTGTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR GCA 90 bp | AGCCCAGGTTCAGTACCACTGCTCCCTGCAAGGTCTCTGATGCATCTCCCTGGATTTTATCAGAACTCTTaGTTGGTCTTGAGCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPGSVPLLPARSLMHLPGFYQNS*LVLSWF Trigger: AAACCAGCTCAAGACCAAGCAAGAGTTCTGATAAAA...TCCAGGGAGATGCATCAGAGACCTTGCAGGGAGCAGTGGTACTGAACCTGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
||
| CDS-3UTR GCA 90 bp | TTGGCCCACAGGGGACAGACGCAGTGGCTTCTACCACAGGAACAAAGGAGGGATAGGAGGTTACTTCATTaGACATTGCTGTGGTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: LAHRGQTQWLLPQEQRRDRRLLH*TLLWLI Trigger: AATTAACCACAGCAATGTGCAATGAAGTAACCTCCT...ATCCCTCCTTTGTTCCTGTGGTAGAAGCCACTGCGTCTGTCCCCTGTGGGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR GCA 90 bp | TCAGCCTGGAAAGAACAGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCCTTCAGCCTTCTTGTTaGTCCCAACAGTGGTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SAWKEQMHLTRAQVQYHCLQPSC*SQQWLK Trigger: CTTTAACCACTGTTGGGAGCAACAAGAAGGCTGAAG...GCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCTGTTCTTTCCAGGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
||
| CDS-3UTR CCA 90 bp | TCAGCCTGGAAAGAACAGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCCAGCCAGACTTTCAATaGACAGCATGTACACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SAWKEQMHLTRAQVQYHCQPDFQ*TACTLP Trigger: AGGAAGTGTACATGCTGTCCATTGAAAGTCTGGCTG...GCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCTGTTCTTTCCAGGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
||
| CDS-3UTR TCA 90 bp | GCTTCTACCACAGGAACAAAGGAGGGATTTTTCTCCCTTTCAAGACTGCAGGCACCCCTGCCTTTTCTTTaGCTGCTGTTAATCCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: ASTTGTKEGFFSLSRLQAPLPFL*LLLIHD Trigger: GTCATGGATTAACAGCAGTCAAAGAAAAGGCAGGGG...TGCCTGCAGTCTTGAAAGGGAGAAAAATCCCTCCTTTGTTCCTGTGGTAGAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
||
| CDS-3UTR GCA 90 bp | AGTCACACAAAAATGCTACTGAGAGAATTCAGATATCTACTTGGCCCACAGGGGCAGCATCCCATAGTGTaGAGTCCTCTCCACTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SHTKMLLREFRYLLGPQGQHPIV*SPLHCE Trigger: CTCACAGTGGAGAGGACTGCACACTATGGGATGCTG...CCCCTGTGGGCCAAGTAGATATCTGAATTCTCTCAGTAGCATTTTTGTGTGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CCA 90 bp | TTTCGTGTGCACACCTTTAGTCCTAGTTCTTGGGAGGCAGAGGCAGGCAGATCTCATATGTGGTGCTATTaGAGCCCTCTAAAAACACAC | + |
|
Preference number: 4 (lower is better) Translates to: FRVHTFSPSSWEAEAGRSHMWCY*SPLKTH Trigger: GTGTGTTTTTAGAGGGCTCCAATAGCACCACATATG...AGATCTGCCTGCCTCTGCCTCCCAAGAACTAGGACTAAAGGTGTGCACACGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
||
| CDS-3UTR TCA 90 bp | TTCTTGGGAGGCAGAGGCAGGCAGATCTTTGTGAGTTTTAGGCTAGCCTGGTCTTGGTTTTCTTGCCAATaGATTCTAAAGCATCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FLGGRGRQIFVSFRLAWSWFSCQ*ILKHPD Trigger: GTCTGGATGCTTTAGAATTCATTGGCAAGAAAACCA...AGACCAGGCTAGCCTAAAACTCACAAAGATCTGCCTGCCTCTGCCTCCCAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
||
| CDS-3UTR TCA 90 bp | AGTCACACAAAAATGCTACTGAGAGAATTCAGATATCTACTTGGCCCACAGGGGATCGACACCACGCTTTaGTCTTCTTCCACCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SHTKMLLREFRYLLGPQGIDTTL*SSSTQS Trigger: TGACTGGGTGGAAGAAGATCAAAGCGTGGTGTCGAT...CCCCTGTGGGCCAAGTAGATATCTGAATTCTCTCAGTAGCATTTTTGTGTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
||
| CDS-3UTR GCA 90 bp | GCTTCTACCACAGGAACAAAGGAGGGATTTTTCTCCCTTTCAAGACTGCAGGCAAGAAGGACTGAACCTTaGTCTCACTCTCATTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: ASTTGTKEGFFSLSRLQARRTEP*SHSHWT Trigger: TGTCCAATGAGAGTGAGAGCAAGGTTCAGTCCTTCT...TGCCTGCAGTCTTGAAAGGGAGAAAAATCCCTCCTTTGTTCCTGTGGTAGAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
||
| CDS-3UTR TCA 90 bp | AGTCACACAAAAATGCTACTGAGAGAATTCAGATATCTACTTGGCCCACAGGGGCAGGGCTTCCAGGTGTaGCAAACCTTGATATTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SHTKMLLREFRYLLGPQGQGFQV*QTLIFI Trigger: GATGAATATCAAGGTTTGTCACACCTGGAAGCCCTG...CCCCTGTGGGCCAAGTAGATATCTGAATTCTCTCAGTAGCATTTTTGTGTGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
||
| CDS-3UTR TCA 90 bp | AGTCACACAAAAATGCTACTGAGAGAATTCAGATATCTACTTGGCCCACAGGGGAGGTGTGACAAACCTTaGTATTCATCAAACAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SHTKMLLREFRYLLGPQGRCDKP*YSSNSI Trigger: GATGCTGTTTGATGAATATCAAGGTTTGTCACACCT...CCCCTGTGGGCCAAGTAGATATCTGAATTCTCTCAGTAGCATTTTTGTGTGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
||
| 3UTR CAA 72 bp | ATGAAGTTCAGTACAAGAACTCATTTAAAGCCATGCTaGAGAAAAATAGGGCATAGAAAGGTAGACATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MKFSTRTHLKPC*RKIGHRKVDIS Trigger: TGAAATGTCTACCTTTCTATGCCCTATTTTTCTCAAGCATGGCTTTAAATGAGTTCTTGTACTGAACTTCAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS CCA 90 bp | CTGCAATCTGGCTGGGCTGTAGCTTTCAAACAGCTGGTGCGGATGTaGGAGACCTGCAGTACCGGGAGCAGCAGCTGGAGGGCGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LQSGWAVAFKQLVRM*ETCSTGSSSWRASC Trigger: GCAGGACGCCCTCCAGCTGCTGCTCCCGGTACTGCAGGTCTCCCACATCCGCACCAGCTGTTTGAAAGCTACAGCCCAGCCAGATTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
||
| CDS GCA 90 bp | GGCTGGGCTGTAGCTTTCAAACAGCTGGTGCGGATGTGGGAGACCTaGAGTACCGGGAGCAGCAGCTGGAGGGCGTCCTGCACATATGTG | + |
|
Preference number: 5 (lower is better) Translates to: GWAVAFKQLVRMWET*STGSSSWRASCTYV Trigger: CACATATGTGCAGGACGCCCTCCAGCTGCTGCTCCCGGTACTGCAGGTCTCCCACATCCGCACCAGCTGTTTGAAAGCTACAGCCCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS CCA 90 bp | CTCTCGACCCTGCCGCCCCTGGTGGAGGAGGAGTGTGGGGGCCTCTaGCAGGGTCCTGATCTGGAGTCACATTTCCAGAGATTCCGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSTLPPLVEEECGGL*QGPDLESHFQRFRF Trigger: AAAACGGAATCTCTGGAAATGTGACTCCAGATCAGGACCCTGCCAGAGGCCCCCACACTCCTCCTCCACCAGGGGCGGCAGGGTCGAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
||
| CDS CCA 90 bp | CAGCTGGTGCGGATGTGGGAGACCTGCAGTACCGGGAGCAGCAGCTaGAGGGCGTCCTGCACATATGTGGTGCTATTGGAGCCCTCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: QLVRMWETCSTGSSS*RASCTYVVLLEPSK Trigger: TTTAGAGGGCTCCAATAGCACCACATATGTGCAGGACGCCCTCCAGCTGCTGCTCCCGGTACTGCAGGTCTCCCACATCCGCACCAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CAA 90 bp | CTGCTCCCTGCAAGGTCTCTGATGCATCTCCCTGGATCAGCACCCCACTTGGCCATGGCCTTATTGAGTTaGTCAGGTGTGGCGGCGACG | + |
|
Preference number: 5 (lower is better) Translates to: LLPARSLMHLPGSAPHLAMALLS*SGVAAT Trigger: CGTCGCCGCCACACCTGACAAACTCAATAAGGCCAT...GGCCAAGTGGGGTGCTGATCCAGGGAGATGCATCAGAGACCTTGCAGGGAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CAA 90 bp | CTGCTCCCTGCAAGGTCTCTGATGCATCTCCCTGGATCAGCACCCCACTTGGCCTGCTTCTCCTTCTCCTaGGCTTCTCTCAACATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLPARSLMHLPGSAPHLACFSFS*ASLNIW Trigger: CCAGATGTTGAGAGAAGCCAAGGAGAAGGAGAAGCA...GGCCAAGTGGGGTGCTGATCCAGGGAGATGCATCAGAGACCTTGCAGGGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CAA 90 bp | CTGCTCCCTGCAAGGTCTCTGATGCATCTCCCTGGATCAGCACCCCACTTGGCCTTCTTCATGGCCTTATaGAGTTTGTCAGGTGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LLPARSLMHLPGSAPHLAFFMAL*SLSGVA Trigger: CGCCACACCTGACAAACTCAATAAGGCCATGAAGAA...GGCCAAGTGGGGTGCTGATCCAGGGAGATGCATCAGAGACCTTGCAGGGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS TCA 90 bp | TCTAAAGCATCCAGACCTCCGGTTAAGACGCTTTTGCCCGTGTTTTaGACCACATTGGTGAGGGCTGACAGCATGCCTCTCGACCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SKASRPPVKTLLPVF*TTLVRADSMPLDPA Trigger: GGCAGGGTCGAGAGGCATGCTGTCAGCCCTCACCAATGTGGTTCAAAACACGGGCAAAAGCGTCTTAACCGGAGGTCTGGATGCTTTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS GCA 90 bp | ATGTGGGAGACCTGCAGTACCGGGAGCAGCAGCTGGAGGGCGTCCTaGACATATGTGGTGCTATTGGAGCCCTCTAAAAACACACTATTG | + |
|
Preference number: 5 (lower is better) Translates to: MWETCSTGSSSWRAS*TYVVLLEPSKNTLL Trigger: CAATAGTGTGTTTTTAGAGGGCTCCAATAGCACCACATATGTGCAGGACGCCCTCCAGCTGCTGCTCCCGGTACTGCAGGTCTCCCACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CAA 90 bp | AGCCCAGGTTCAGTACCACTGCTCCCTGCAAGGTCTCTGATGCATCTCCCTGGATATCGACACCACGCTTaGATCTTCTTCCACCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPGSVPLLPARSLMHLPGYRHHA*IFFHPV Trigger: GACTGGGTGGAAGAAGATCAAAGCGTGGTGTCGATA...TCCAGGGAGATGCATCAGAGACCTTGCAGGGAGCAGTGGTACTGAACCTGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CAA 90 bp | AGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCTCCCTGCAAGGTCTCTTCGGGAGATGCAGAATaGGCACTGTGGATTCGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: RCISQEPRFSTTAPCKVSSGDAE*ALWIRR Trigger: CCTACGAATCCACAGTGCCAATTCTGCATCTCCCGA...AGAGACCTTGCAGGGAGCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CAA 90 bp | TGCCAGAGAACCTCAGCCTGGAAAGAACAGATGCATCTCACAAGAGCCCAGGTTCGTTCCATCAGTGTCTaGGTCCGCTTAAACCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CQRTSAWKEQMHLTRAQVRSISV*VRLNPG Trigger: CCCAGGGTTTAAGCGGACCAAGACACTGATGGAACG...AACCTGGGCTCTTGTGAGATGCATCTGTTCTTTCCAGGCTGAGGTTCTCTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CAA 90 bp | AGCCCAGGTTCAGTACCACTGCTCCCTGCAAGGTCTCTGATGCATCTCCCTGGATTGCTCTCACTCTCATaGGACAGAATTTCCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPGSVPLLPARSLMHLPGLLSLS*DRISRA Trigger: AGCCCTGGAAATTCTGTCCAATGAGAGTGAGAGCAA...TCCAGGGAGATGCATCAGAGACCTTGCAGGGAGCAGTGGTACTGAACCTGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CAA 90 bp | TCAGCCTGGAAAGAACAGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCGCTTTTGCCCGTGTTTaGAACCACATTGGTGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SAWKEQMHLTRAQVQYHCAFARV*NHIGEG Trigger: GCCCTCACCAATGTGGTTCAAAACACGGGCAAAAGC...GCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCTGTTCTTTCCAGGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CAA 90 bp | GCTTCTACCACAGGAACAAAGGAGGGATTTTTCTCCCTTTCAAGACTGCAGGCATCCTCCTCCGACCCTTaGGCCACATCTATCGACACC | + |
|
Preference number: 5 (lower is better) Translates to: ASTTGTKEGFFSLSRLQASSSDP*ATSIDT Trigger: GGTGTCGATAGATGTGGCCAAAGGGTCGGAGGAGGA...TGCCTGCAGTCTTGAAAGGGAGAAAAATCCCTCCTTTGTTCCTGTGGTAGAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS TCA 90 bp | GATCTCAGGCTGCTCTTCCATGTGGTCATCTGGTGCTGGTTCATTTaGAGTTGTAGCTGGACCACACTGCACTTCTGCTGCATCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DLRLLFHVVIWCWFI*SCSWTTLHFCCIFS Trigger: GCTGAAGATGCAGCAGAAGTGCAGTGTGGTCCAGCTACAACTTCAAATGAACCAGCACCAGATGACCACATGGAAGAGCAGCCTGAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031080.15 ENSMUST00000139366.2 |
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| CDS GCA 90 bp | ATCCCTGGAGGGGTGGACTCTGCACACATAGCTGTGATCTCAGGCTaGTCTTCCATGTGGTCATCTGGTGCTGGTTCATTTGAAGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IPGGVDSAHIAVISG*SSMWSSGAGSFEVV Trigger: TACAACTTCAAATGAACCAGCACCAGATGACCACATGGAAGAGCAGCCTGAGATCACAGCTATGTGTGCAGAGTCCACCCCTCCAGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031080.15 ENSMUST00000139366.2 |
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| CDS CCA 90 bp | GTGGACTCTGCACACATAGCTGTGATCTCAGGCTGCTCTTCCATGTaGTCATCTGGTGCTGGTTCATTTGAAGTTGTAGCTGGACCACAC | + |
|
Preference number: 5 (lower is better) Translates to: VDSAHIAVISGCSSM*SSGAGSFEVVAGPH Trigger: GTGTGGTCCAGCTACAACTTCAAATGAACCAGCACCAGATGACCACATGGAAGAGCAGCCTGAGATCACAGCTATGTGTGCAGAGTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031080.15 ENSMUST00000139366.2 |
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| CDS-3UTR CAA 90 bp | CCTGGAAAGAACAGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCTCCCTGGTTTCTCCTCCTCTaGTCCATGGAGAATCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: PGKNRCISQEPRFSTTAPWFLLL*SMENQL Trigger: GAGTTGATTCTCCATGGACAAGAGGAGGAGAAACCA...GGGAGCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCTGTTCTTTCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS TCA 90 bp | ACCCTGGGTCGCTTTCTGCGAGGACAATCATGGTTTTCTTGCCAATaGATTCTAAAGCATCCAGACCTCCGGTTAAGACGCTTTTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: TLGRFLRGQSWFSCQ*ILKHPDLRLRRFCP Trigger: CGGGCAAAAGCGTCTTAACCGGAGGTCTGGATGCTTTAGAATTCATTGGCAAGAAAACCATGATTGTCCTCGCAGAAAGCGACCCAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
||
| CDS CCA 90 bp | CTTTCTCTTCCTTTCCTTCTTCCTTCTCTTCCTCCTCCGACCCTTTaGCCACATCTATCGACACCACGCTTTGATCTTCTTCCACCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSLPFLLPSLPPPTL*PHLSTPRFDLLPPS Trigger: ACTGGGTGGAAGAAGATCAAAGCGTGGTGTCGATAGATGTGGCCAAAGGGTCGGAGGAGGAAGAGAAGGAAGAAGGAAAGGAAGAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
||
| CDS-3UTR CAA 90 bp | CCTGGAAAGAACAGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCTCCCTATCAGAACTCTTGCTaGGTCTTGAGCTGGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PGKNRCISQEPRFSTTAPYQNSC*VLSWFL Trigger: GAGAAACCAGCTCAAGACCAAGCAAGAGTTCTGATA...GGGAGCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCTGTTCTTTCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
||
| CDS TCA 90 bp | CAGAATTGGCACTGTGGATTCGTAGGGTTGCCCCTGCCTTTTCTTTaGCTGCTGTTAATCCATGACCTACTGTGGCTGATGCAGATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QNWHCGFVGLPLPFL*LLLIHDLLWLMQMR Trigger: TCTCATCTGCATCAGCCACAGTAGGTCATGGATTAACAGCAGTCAAAGAAAAGGCAGGGGCAACCCTACGAATCCACAGTGCCAATTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031080.15 ENSMUST00000139366.2 |
||
| CDS CCA 90 bp | CAAGGAGACAGTTCGTTCCATCAGTGTCTTGGTCCGCTTAAACCCTaGGTCGCTTTCTGCGAGGACAATCATGGTTTTCTTGCCAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: QGDSSFHQCLGPLKP*VAFCEDNHGFLANE Trigger: TTCATTGGCAAGAAAACCATGATTGTCCTCGCAGAAAGCGACCCAGGGTTTAAGCGGACCAAGACACTGATGGAACGAACTGTCTCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
||
| CDS-3UTR CAA 90 bp | TTTCGTGTGCACACCTTTAGTCCTAGTTCTTGGGAGGCAGAGGCAGGCAGATCTACTTCAGCCTTCTTGTaGCTCCCAACAGTGGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: FRVHTFSPSSWEAEAGRSTSAFL*LPTVVK Trigger: TTTAACCACTGTTGGGAGCAACAAGAAGGCTGAAGT...AGATCTGCCTGCCTCTGCCTCCCAAGAACTAGGACTAAAGGTGTGCACACGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
||
| CDS-3UTR CAA 90 bp | AGATGCATCTCACAAGAGCCCAGGTTCAGTACCACTGCTCCCTGCAAGGTCTCTTCATTCTCTGATTCTTaGGCTACAAAGATGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RCISQEPRFSTTAPCKVSSFSDS*ATKMSL Trigger: CAAGGACATCTTTGTAGCCAAAGAATCAGAGAATGA...AGAGACCTTGCAGGGAGCAGTGGTACTGAACCTGGGCTCTTGTGAGATGCATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
||
| CDS-3UTR CAA 90 bp | AGTCACACAAAAATGCTACTGAGAGAATTCAGATATCTACTTGGCCCACAGGGGAGGACTTCAGCCTTCTaGTTGCTCCCAACAGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SHTKMLLREFRYLLGPQGRTSAF*LLPTVV Trigger: AACCACTGTTGGGAGCAACAAGAAGGCTGAAGTCCT...CCCCTGTGGGCCAAGTAGATATCTGAATTCTCTCAGTAGCATTTTTGTGTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
||
| CDS TCA 90 bp | GAATCAACTCTGCAACCTTATGTAGCTGTTCAATGCAGCGTGCAGTaGCTTCAGCCAGACTTTCAATGGACAGCATGTACACTTCCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: ESTLQPYVAVQCSVQ*LQPDFQWTACTLPL Trigger: TAGAGGAAGTGTACATGCTGTCCATTGAAAGTCTGGCTGAAGTCACTGCACGCTGCATTGAACAGCTACATAAGGTTGCAGAGTTGATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS-3UTR CAA 90 bp | GCTTCTACCACAGGAACAAAGGAGGGATTTTTCTCCCTTTCAAGACTGCAGGCATCTAAAAACACACTATaGATCATGGGGTTAAGGACT | + |
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Preference number: 5 (lower is better) Translates to: ASTTGTKEGFFSLSRLQASKNTL*IMGLRT Trigger: AGTCCTTAACCCCATGATCAATAGTGTGTTTTTAGA...TGCCTGCAGTCTTGAAAGGGAGAAAAATCCCTCCTTTGTTCCTGTGGTAGAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS GCA 72 bp | GTAGCTTTCAAACAGCTGGTGCGGATGTGGGAGACCTaGAGTACCGGGAGCAGCAGCTGGAGGGCGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: VAFKQLVRMWET*STGSSSWRASC Trigger: GCAGGACGCCCTCCAGCTGCTGCTCCCGGTACTGCAGGTCTCCCACATCCGCACCAGCTGTTTGAAAGCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS CCA 72 bp | GGCTGGGCTGTAGCTTTCAAACAGCTGGTGCGGATGTaGGAGACCTGCAGTACCGGGAGCAGCAGCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GWAVAFKQLVRM*ETCSTGSSSWR Trigger: CCTCCAGCTGCTGCTCCCGGTACTGCAGGTCTCCCACATCCGCACCAGCTGTTTGAAAGCTACAGCCCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS CCA 72 bp | CGGATGTGGGAGACCTGCAGTACCGGGAGCAGCAGCTaGAGGGCGTCCTGCACATATGTGGTGCTATTGGAG | + |
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Preference number: 6 (lower is better) Translates to: RMWETCSTGSSS*RASCTYVVLLE Trigger: CTCCAATAGCACCACATATGTGCAGGACGCCCTCCAGCTGCTGCTCCCGGTACTGCAGGTCTCCCACATCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS CAA 90 bp | GGACCACACTGCACTTCTGCTGCATCTTCAGCAGGGGAGTCACTGTaGGGCATCTCAGCAGCATCTTCTCCGACTCCATTGGCTATGGTG | + |
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Preference number: 6 (lower is better) Translates to: GPHCTSAASSAGESL*GISAASSPTPLAMV Trigger: CACCATAGCCAATGGAGTCGGAGAAGATGCTGCTGAGATGCCCAACAGTGACTCCCCTGCTGAAGATGCAGCAGAAGTGCAGTGTGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031080.15 ENSMUST00000139366.2 |
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| CDS TCA 72 bp | TCCAGACCTCCGGTTAAGACGCTTTTGCCCGTGTTTTaGACCACATTGGTGAGGGCTGACAGCATGCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SRPPVKTLLPVF*TTLVRADSMPL Trigger: GAGAGGCATGCTGTCAGCCCTCACCAATGTGGTTCAAAACACGGGCAAAAGCGTCTTAACCGGAGGTCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS CAA 72 bp | TGCACTTCTGCTGCATCTTCAGCAGGGGAGTCACTGTaGGGCATCTCAGCAGCATCTTCTCCGACTCCATTG | + |
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Preference number: 6 (lower is better) Translates to: CTSAASSAGESL*GISAASSPTPL Trigger: CAATGGAGTCGGAGAAGATGCTGCTGAGATGCCCAACAGTGACTCCCCTGCTGAAGATGCAGCAGAAGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031080.15 ENSMUST00000139366.2 |
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| CDS CAA 72 bp | ATCTGGGACAAGGAGACAGTTCGTTCCATCAGTGTCTaGGTCCGCTTAAACCCTGGGTCGCTTTCTGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: IWDKETVRSISV*VRLNPGSLSAR Trigger: CCTCGCAGAAAGCGACCCAGGGTTTAAGCGGACCAAGACACTGATGGAACGAACTGTCTCCTTGTCCCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS CAA 90 bp | TCTCTCAACATCTGGGACAAGGAGACAGTTCGTTCCATCAGTGTCTaGGTCCGCTTAAACCCTGGGTCGCTTTCTGCGAGGACAATCATG | + |
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Preference number: 6 (lower is better) Translates to: SLNIWDKETVRSISV*VRLNPGSLSARTIM Trigger: CATGATTGTCCTCGCAGAAAGCGACCCAGGGTTTAAGCGGACCAAGACACTGATGGAACGAACTGTCTCCTTGTCCCAGATGTTGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS TCA 72 bp | CTGCTCTTCCATGTGGTCATCTGGTGCTGGTTCATTTaGAGTTGTAGCTGGACCACACTGCACTTCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LLFHVVIWCWFI*SCSWTTLHFCC Trigger: GCAGCAGAAGTGCAGTGTGGTCCAGCTACAACTTCAAATGAACCAGCACCAGATGACCACATGGAAGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031080.15 ENSMUST00000139366.2 |
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| CDS CCA 72 bp | AGTCACATTTCCAGAGATTCCGTTTTCAGCATCAGTTaGGGCCCCTTCGGGAGATGCAGAATTGGCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: SHISRDSVFSIS*GPFGRCRIGTV Trigger: CACAGTGCCAATTCTGCATCTCCCGAAGGGGCCCCAACTGATGCTGAAAACGGAATCTCTGGAAATGTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS CAA 72 bp | GGACAGCATGTACACTTCCTCTACAGTCTTAGCTCCTaGGCCCCCTGTTTTGTCTTCTTCAGGTTCTTCGGC | + |
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Preference number: 6 (lower is better) Translates to: GQHVHFLYSLSS*APCFVFFRFFG Trigger: GCCGAAGAACCTGAAGAAGACAAAACAGGGGGCCAAGGAGCTAAGACTGTAGAGGAAGTGTACATGCTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS CAA 90 bp | CTCTTCCTCCTCCGACCCTTTGGCCACATCTATCGACACCACGCTTaGATCTTCTTCCACCCAGTCATGAGCTTTCTTCATGGCCTTATT | + |
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Preference number: 6 (lower is better) Translates to: LFLLRPFGHIYRHHA*IFFHPVMSFLHGLI Trigger: AATAAGGCCATGAAGAAAGCTCATGACTGGGTGGAAGAAGATCAAAGCGTGGTGTCGATAGATGTGGCCAAAGGGTCGGAGGAGGAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS CCA 72 bp | GACAGCATGTACACTTCCTCTACAGTCTTAGCTCCTTaGCCCCCTGTTTTGTCTTCTTCAGGTTCTTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: DSMYTSSTVLAP*PPVLSSSGSSA Trigger: AGCCGAAGAACCTGAAGAAGACAAAACAGGGGGCCAAGGAGCTAAGACTGTAGAGGAAGTGTACATGCTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS CAA 72 bp | CTCCGACCCTTTGGCCACATCTATCGACACCACGCTTaGATCTTCTTCCACCCAGTCATGAGCTTTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: LRPFGHIYRHHA*IFFHPVMSFLH Trigger: ATGAAGAAAGCTCATGACTGGGTGGAAGAAGATCAAAGCGTGGTGTCGATAGATGTGGCCAAAGGGTCGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS TCA 72 bp | GTTGCCCCTGCCTTTTCTTTGACTGCTGTTAATCCATaGCCTACTGTGGCTGATGCAGATGAGAGCAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: VAPAFSLTAVNP*PTVADADESRD Trigger: ATCTCTGCTCTCATCTGCATCAGCCACAGTAGGTCATGGATTAACAGCAGTCAAAGAAAAGGCAGGGGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031080.15 ENSMUST00000139366.2 |
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| CDS GCA 72 bp | CAGTGTCTTGGTCCGCTTAAACCCTGGGTCGCTTTCTaGGAGGACAATCATGGTTTTCTTGCCAATGAATTC | + |
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Preference number: 6 (lower is better) Translates to: QCLGPLKPWVAF*EDNHGFLANEF Trigger: GAATTCATTGGCAAGAAAACCATGATTGTCCTCGCAGAAAGCGACCCAGGGTTTAAGCGGACCAAGACACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS CCA 72 bp | AGTTCGTTCCATCAGTGTCTTGGTCCGCTTAAACCCTaGGTCGCTTTCTGCGAGGACAATCATGGTTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SSFHQCLGPLKP*VAFCEDNHGFL Trigger: AAGAAAACCATGATTGTCCTCGCAGAAAGCGACCCAGGGTTTAAGCGGACCAAGACACTGATGGAACGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS CAA 90 bp | ACTTTCAATGGACAGCATGTACACTTCCTCTACAGTCTTAGCTCCTaGGCCCCCTGTTTTGTCTTCTTCAGGTTCTTCGGCTTTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TFNGQHVHFLYSLSS*APCFVFFRFFGFLF Trigger: GAAGAGAAAGCCGAAGAACCTGAAGAAGACAAAACAGGGGGCCAAGGAGCTAAGACTGTAGAGGAAGTGTACATGCTGTCCATTGAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS TCA 72 bp | CGCTTTCTGCGAGGACAATCATGGTTTTCTTGCCAATaGATTCTAAAGCATCCAGACCTCCGGTTAAGACGC | + |
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Preference number: 6 (lower is better) Translates to: RFLRGQSWFSCQ*ILKHPDLRLRR Trigger: GCGTCTTAACCGGAGGTCTGGATGCTTTAGAATTCATTGGCAAGAAAACCATGATTGTCCTCGCAGAAAGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS TCA 72 bp | CTGCAACCTTATGTAGCTGTTCAATGCAGCGTGCAGTaGCTTCAGCCAGACTTTCAATGGACAGCATGTACA | + |
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Preference number: 6 (lower is better) Translates to: LQPYVAVQCSVQ*LQPDFQWTACT Trigger: TGTACATGCTGTCCATTGAAAGTCTGGCTGAAGTCACTGCACGCTGCATTGAACAGCTACATAAGGTTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS CAA 72 bp | ACTTCCTCTACAGTCTTAGCTCCTTGGCCCCCTGTTTaGTCTTCTTCAGGTTCTTCGGCTTTCTCTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: TSSTVLAPWPPV*SSSGSSAFSSF Trigger: AAAGGAAGAGAAAGCCGAAGAACCTGAAGAAGACAAAACAGGGGGCCAAGGAGCTAAGACTGTAGAGGAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS CAA 90 bp | TCCTGCACATATGTGGTGCTATTGGAGCCCTCTAAAAACACACTATaGATCATGGGGTTAAGGACTTCAGCCTTCTTGTTGCTCCCAACA | + |
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Preference number: 6 (lower is better) Translates to: SCTYVVLLEPSKNTL*IMGLRTSAFLLLPT Trigger: TGTTGGGAGCAACAAGAAGGCTGAAGTCCTTAACCCCATGATCAATAGTGTGTTTTTAGAGGGCTCCAATAGCACCACATATGTGCAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS TCA 72 bp | ACTCTCATTGGACAGAATTTCCAGGGCTTCCAGGTGTaGCAAACCTTGATATTCATCAAACAGCATCCCATA | + |
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Preference number: 6 (lower is better) Translates to: TLIGQNFQGFQV*QTLIFIKQHPI Trigger: TATGGGATGCTGTTTGATGAATATCAAGGTTTGTCACACCTGGAAGCCCTGGAAATTCTGTCCAATGAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS CAA 72 bp | TATGTGGTGCTATTGGAGCCCTCTAAAAACACACTATaGATCATGGGGTTAAGGACTTCAGCCTTCTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: YVVLLEPSKNTL*IMGLRTSAFLL Trigger: CAACAAGAAGGCTGAAGTCCTTAACCCCATGATCAATAGTGTGTTTTTAGAGGGCTCCAATAGCACCACATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS CCA 72 bp | TCTTCGATAAGGAGGTTACTTCATTGCACATTGCTGTaGTTAATTTTATCAGAACTCTTGCTTGGTCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: SSIRRLLHCTLL*LILSELLLGLE Trigger: CTCAAGACCAAGCAAGAGTTCTGATAAAATTAACCACAGCAATGTGCAATGAAGTAACCTCCTTATCGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS CAA 90 bp | TCTGGGTTTGCTTCATTCTCTGATTCTTTGGCTACAAAGATGTCCTaGATTGAAATTAGGTCATTTTTCAAGAGTTCTAGCTTCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SGFASFSDSLATKMS*IEIRSFFKSSSFSP Trigger: TGGAGAGAAGCTAGAACTCTTGAAAAATGACCTAATTTCAATCAAGGACATCTTTGTAGCCAAAGAATCAGAGAATGAAGCAAACCCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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| CDS CAA 90 bp | GTGGTTAAAGAATTTGTAAACTTCTTCGATAAGGAGGTTACTTCATaGCACATTGCTGTGGTTAATTTTATCAGAACTCTTGCTTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: VVKEFVNFFDKEVTS*HIAVVNFIRTLAWS Trigger: AGACCAAGCAAGAGTTCTGATAAAATTAACCACAGCAATGTGCAATGAAGTAACCTCCTTATCGAAGAAGTTTACAAATTCTTTAACCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031080.15 |
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