Pregenerated sensors for FAM111A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024691Ensembl transcript IDs: ENSMUST00000025595.5, ENSMUST00000144662.8, ENSMUST00000151307.8
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGAGCTCTGGTCAGCAGAGAAGGGAGATAAGCGTAGAACCAAATaGGTATGTTTGAAATTGGTTCAAGTTTCCAGAAGCATGGTAGGC | + |
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Preference number: 1 (lower is better) Translates to: AELWSAEKGDKRRTK*VCLKLVQVSRSMVG Trigger: GCCTACCATGCTTCTGGAAACTTGAACCAATTTCAAACATACTCATTTGGTTCTACGCTTATCTCCCTTCTCTGCTGACCAGAGCTCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR CCA 90 bp | CTCTCCATAACTCAAGACCAGGAACTCTCAGGTGCACAAATTCTATaGCAGAGACCAGTTCCTTGCCTGCTCAATGATTTCCAAAACCAT | + |
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Preference number: 1 (lower is better) Translates to: LSITQDQELSGAQIL*QRPVPCLLNDFQNH Trigger: ATGGTTTTGGAAATCATTGAGCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGTCTTGAGTTATGGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR GCA 90 bp | CAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTaGCTGCTCAATGATTTCCAAAACCATTCCTTGAAGGTTAATTTC | + |
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Preference number: 1 (lower is better) Translates to: QELSGAQILWQRPVP*LLNDFQNHSLKVNF Trigger: GAAATTAACCTTCAAGGAATGGTTTTGGAAATCATTGAGCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR CCA 90 bp | ATGTTTAATGGTGATTCATCTGTATTTGATTTGGGAACAATACATTaGGCAGGGGACACAAAATATCTCACAATAGGACTAGGAGGTGTC | + |
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Preference number: 1 (lower is better) Translates to: MFNGDSSVFDLGTIH*AGDTKYLTIGLGGV Trigger: GACACCTCCTAGTCCTATTGTGAGATATTTTGTGTCCCCTGCCCAATGTATTGTTCCCAAATCAAATACAGATGAATCACCATTAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCTCATCCAGTGTCCTGGCTaGGCTCTGGTCAGCAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: QELSGAQILWQRPVPCLLIQCPG*ALVSRE Trigger: TTCTCTGCTGACCAGAGCTCAGCCAGGACACTGGAT...GAGCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCTCGGGCTGAAAACTCTGTaGTCCAGTGTCCTGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: QELSGAQILWQRPVPCLLGLKTL*SSVLAE Trigger: CTCAGCCAGGACACTGGATCACAGAGTTTTCAGCCC...GAGCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR-3UTR CCA 90 bp | GACCAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGGTCCTGGCTGAGCTCTaGTCAGCAGAGAAGGGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: DQELSGAQILWQRPVPCLVLAEL*SAEKGD Trigger: ATCTCCCTTCTCTGCTGACCAGAGCTCAGCCAGGAC...CAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCTCTGTGATCCAGTGTCCTaGCTGAGCTCTGGTCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: QELSGAQILWQRPVPCLLCDPVS*LSSGQQ Trigger: CTGCTGACCAGAGCTCAGCCAGGACACTGGATCACA...GAGCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCTGTGATCCAGTGTCCTaGCTGAGCTCTGGTCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: TRNSQVHKFYGRDQFLACCDPVS*LSSGQQ Trigger: CTGCTGACCAGAGCTCAGCCAGGACACTGGATCACA...GCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR-3UTR TCA 90 bp | AACCAGTGCTTGCTCTCCATAACTCAAGACCAGGAACTCTCAGGTGCACAAATTATCCAGTGTCCTGGCTaGGCTCTGGTCAGCAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: NQCLLSITQDQELSGAQIIQCPG*ALVSRE Trigger: TTCTCTGCTGACCAGAGCTCAGCCAGGACACTGGAT...AATTTGTGCACCTGAGAGTTCCTGGTCTTGAGTTATGGAGAGCAAGCACTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR-3UTR TCA 90 bp | AACCAGTGCTTGCTCTCCATAACTCAAGACCAGGAACTCTCAGGTGCACAAATTGGGCTGAAAACTCTGTaGTCCAGTGTCCTGGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: NQCLLSITQDQELSGAQIGLKTL*SSVLAE Trigger: CTCAGCCAGGACACTGGATCACAGAGTTTTCAGCCC...AATTTGTGCACCTGAGAGTTCCTGGTCTTGAGTTATGGAGAGCAAGCACTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR-3UTR CCA 90 bp | AACCAGTGCTTGCTCTCCATAACTCAAGACCAGGAACTCTCAGGTGCACAAATTGTCCTGGCTGAGCTCTaGTCAGCAGAGAAGGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: NQCLLSITQDQELSGAQIVLAEL*SAEKGD Trigger: ATCTCCCTTCTCTGCTGACCAGAGCTCAGCCAGGAC...AATTTGTGCACCTGAGAGTTCCTGGTCTTGAGTTATGGAGAGCAAGCACTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTGCCTGCTCAATGATTTCCAAAACCATTCCTTGAAGGTTAATTTCAGATCCATCCAGTGTCCTGGCTaGGCTCTGGTCAGCAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: PCLLNDFQNHSLKVNFRSIQCPG*ALVSRE Trigger: TTCTCTGCTGACCAGAGCTCAGCCAGGACACTGGAT...GGATCTGAAATTAACCTTCAAGGAATGGTTTTGGAAATCATTGAGCAGGCAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCTCCAACTCCAGTTTCTATaGTCTGAACTTTCTCACATC | + |
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Preference number: 2 (lower is better) Translates to: QELSGAQILWQRPVPCLLQLQFL*SELSHI Trigger: GATGTGAGAAAGTTCAGAGCATAGAAACTGGAGTTG...GAGCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCTCGTAAGAAAGCCAAAGTaGAAGAAGGGCATCTATGAT | + |
|
Preference number: 2 (lower is better) Translates to: QELSGAQILWQRPVPCLLVRKPK*KKGIYD Trigger: ATCATAGATGCCCTTCTTCCACTTTGGCTTTCTTAC...GAGCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR-3UTR GCA 90 bp | AACCAGTGCTTGCTCTCCATAACTCAAGACCAGGAACTCTCAGGTGCACAAATTCAGAGACCAGTTCCTTaGCTGCTCAATGATTTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: NQCLLSITQDQELSGAQIQRPVP*LLNDFQ Trigger: TTGGAAATCATTGAGCAGGCAAGGAACTGGTCTCTG...AATTTGTGCACCTGAGAGTTCCTGGTCTTGAGTTATGGAGAGCAAGCACTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR-3UTR CCA 90 bp | GACCAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCTAGAACTGCCATTTTaGGGTGAAAGCAATCATTTT | + |
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Preference number: 2 (lower is better) Translates to: DQELSGAQILWQRPVPCLLELPF*GESNHF Trigger: AAAATGATTGCTTTCACCCCAAAATGGCAGTTCTAG...CAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR TCA 72 bp | TCTATGATCAGGGGCATCTTAGGGCTGAAAACTCTGTaGTCCAGTGTCCTGGCTGAGCTCTGGTCAGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: SMIRGILGLKTL*SSVLAELWSAE Trigger: CTCTGCTGACCAGAGCTCAGCCAGGACACTGGATCACAGAGTTTTCAGCCCTAAGATGCCCCTGATCATAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR GCA 72 bp | CTTGCTCTCCATAACTCAAGACCAGGAACTCTCAGGTaGACAAATTCTATGGCAGAGACCAGTTCCTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LALHNSRPGTLR*TNSMAETSSLP Trigger: AGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGTCTTGAGTTATGGAGAGCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR TCA 72 bp | GGTCTCATTGACTCTGATTTTGATGAGATTACTTCTTaGACACCGCGTCCTTTCTCTCCAAGGGACCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: GLIDSDFDEITS*TPRPFSPRDQD Trigger: GTCCTGGTCCCTTGGAGAGAAAGGACGCGGTGTTCAAGAAGTAATCTCATCAAAATCAGAGTCAATGAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR CCA 72 bp | ACTCAAGACCAGGAACTCTCAGGTGCACAAATTCTATaGCAGAGACCAGTTCCTTGCCTGCTCAATGATTTC | + |
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Preference number: 3 (lower is better) Translates to: TQDQELSGAQIL*QRPVPCLLNDF Trigger: GAAATCATTGAGCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGTCTTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR TCA 72 bp | TGGTCAGCAGAGAAGGGAGATAAGCGTAGAACCAAATaGGTATGTTTGAAATTGGTTCAAGTTTCCAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: WSAEKGDKRRTK*VCLKLVQVSRS Trigger: GCTTCTGGAAACTTGAACCAATTTCAAACATACTCATTTGGTTCTACGCTTATCTCCCTTCTCTGCTGACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR GCA 72 bp | TTCCATGAATCTTTTGGCCAACAACTCCAGTTTCTATaGTCTGAACTTTCTCACATCGTAGCATTTCCTGAC | + |
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Preference number: 3 (lower is better) Translates to: FHESFGQQLQFL*SELSHIVAFPD Trigger: GTCAGGAAATGCTACGATGTGAGAAAGTTCAGAGCATAGAAACTGGAGTTGTTGGCCAAAAGATTCATGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| 3UTR CCA 72 bp | GGTGATTCATCTGTATTTGATTTGGGAACAATACATTaGGCAGGGGACACAAAATATCTCACAATAGGACTA | + |
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Preference number: 3 (lower is better) Translates to: GDSSVFDLGTIH*AGDTKYLTIGL Trigger: TAGTCCTATTGTGAGATATTTTGTGTCCCCTGCCCAATGTATTGTTCCCAAATCAAATACAGATGAATCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR GCA 90 bp | GACCAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGGTGATGCCAGCAGCATaGATGGCCACCAATGAACCA | + |
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Preference number: 4 (lower is better) Translates to: DQELSGAQILWQRPVPCLVMPAA*MATNEP Trigger: TGGTTCATTGGTGGCCATGCATGCTGCTGGCATCAC...CAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR TCA 90 bp | ACCAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCAGCTCAGCTGCAACCTaGAAAAGCTTGCCCTCTAAC | + |
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Preference number: 4 (lower is better) Translates to: TRNSQVHKFYGRDQFLACSSAAT*KSLPSN Trigger: GTTAGAGGGCAAGCTTTTTCAGGTTGCAGCTGAGCT...GCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR TCA 90 bp | GACCAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGAGCTCAGCTGCAACCTaGAAAAGCTTGCCCTCTAAC | + |
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Preference number: 4 (lower is better) Translates to: DQELSGAQILWQRPVPCLSSAAT*KSLPSN Trigger: GTTAGAGGGCAAGCTTTTTCAGGTTGCAGCTGAGCT...CAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR TCA 90 bp | CAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCTCTCTGACCCAGAATTCTaGGTGACAGAGACTACTCTG | + |
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Preference number: 4 (lower is better) Translates to: QELSGAQILWQRPVPCLLSDPEF*VTETTL Trigger: CAGAGTAGTCTCTGTCACTCAGAATTCTGGGTCAGA...GAGCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR CCA 90 bp | ACCAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCGTGGTCTTTGGTCCCTaGTGTTGGTTATATCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: TRNSQVHKFYGRDQFLACVVFGP*CWLYPL Trigger: CAAGGGATATAACCAACACCAGGGACCAAAGACCAC...GCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR CCA 90 bp | CAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCTCGTGGTCTTTGGTCCCTaGTGTTGGTTATATCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: QELSGAQILWQRPVPCLLVVFGP*CWLYPL Trigger: CAAGGGATATAACCAACACCAGGGACCAAAGACCAC...GAGCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR GCA 90 bp | ACCAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCCCTCTTACTCCCAACTaGATGAATGCAAAATCGGAC | + |
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Preference number: 4 (lower is better) Translates to: TRNSQVHKFYGRDQFLACPLTPN*MNAKSD Trigger: GTCCGATTTTGCATTCATGCAGTTGGGAGTAAGAGG...GCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR GCA 90 bp | CAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCTCCCTCTTACTCCCAACTaGATGAATGCAAAATCGGAC | + |
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Preference number: 4 (lower is better) Translates to: QELSGAQILWQRPVPCLLPLTPN*MNAKSD Trigger: GTCCGATTTTGCATTCATGCAGTTGGGAGTAAGAGG...GAGCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR GCA 90 bp | GACCAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCCTCTTACTCCCAACTaGATGAATGCAAAATCGGAC | + |
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Preference number: 4 (lower is better) Translates to: DQELSGAQILWQRPVPCLPLTPN*MNAKSD Trigger: GTCCGATTTTGCATTCATGCAGTTGGGAGTAAGAGG...CAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR GCA 90 bp | AACCAGTGCTTGCTCTCCATAACTCAAGACCAGGAACTCTCAGGTGCACAAATTGTGATGCCAGCAGCATaGATGGCCACCAATGAACCA | + |
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Preference number: 4 (lower is better) Translates to: NQCLLSITQDQELSGAQIVMPAA*MATNEP Trigger: TGGTTCATTGGTGGCCATGCATGCTGCTGGCATCAC...AATTTGTGCACCTGAGAGTTCCTGGTCTTGAGTTATGGAGAGCAAGCACTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR CCA 90 bp | ACCAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCGGTGAAAGTGGTCTTTaGTCCCTGGTGTTGGTTATA | + |
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Preference number: 4 (lower is better) Translates to: TRNSQVHKFYGRDQFLACGESGL*SLVLVI Trigger: TATAACCAACACCAGGGACCAAAGACCACTTTCACC...GCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR CCA 90 bp | GACCAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGGGTGAAAGTGGTCTTTaGTCCCTGGTGTTGGTTATA | + |
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Preference number: 4 (lower is better) Translates to: DQELSGAQILWQRPVPCLGESGL*SLVLVI Trigger: TATAACCAACACCAGGGACCAAAGACCACTTTCACC...CAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR CCA 90 bp | GACCAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGTTGGAAACTCCAGCCTaGTATGTACAAGTGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: DQELSGAQILWQRPVPCLLETPA*YVQVMP Trigger: TGGCATCACTTGTACATACCAGGCTGGAGTTTCCAA...CAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR TCA 90 bp | ACCAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCCACCCAAGGTTACTGTaGTTTTCTTATTTAGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: TRNSQVHKFYGRDQFLACHPRLL*FSYLGE Trigger: CTCCCCTAAATAAGAAAATCACAGTAACCTTGGGTG...GCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR TCA 90 bp | GACCAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGAAAGTTTCTGTTCTCTaGCCCAGAATTCTGAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: DQELSGAQILWQRPVPCLKVSVL*PRILSD Trigger: GTCACTCAGAATTCTGGGTCAGAGAACAGAAACTTT...CAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR TCA 90 bp | ACCAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCGTCACCTTTACACACTaGCTAATTATGTTTGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: TRNSQVHKFYGRDQFLACVTFTH*LIMFAH Trigger: GTGGGCAAACATAATTAGTCAGTGTGTAAAGGTGAC...GCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR TCA 90 bp | ACCAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCACCACATCAGAGTTGTaGAGCATTTCCTGGAAACTT | + |
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Preference number: 4 (lower is better) Translates to: TRNSQVHKFYGRDQFLACTTSEL*SISWKL Trigger: AAGTTTCCAGGAAATGCTTCACAACTCTGATGTGGT...GCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR GCA 90 bp | CAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCTCGCCTGCTTCCTCTCTTaGTTGAAAATTTTCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QELSGAQILWQRPVPCLLACFLS*LKIFLT Trigger: TGTCAGGAAAATTTTCAAGCAAGAGAGGAAGCAGGC...GAGCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCTCCCACTTTTACTGTGTTaGGGTCATTCTGCTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QELSGAQILWQRPVPCLLPLLLC*GHSALL Trigger: AAGAAGAGCAGAATGACCCCAACACAGTAAAAGTGG...GAGCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 |
||
| CDS-3UTR TCA 90 bp | AATGCCTGGTACCTAGGACGTAATCTAGAACTGCCATTTTGGGGTGAAAGCAATACCCAGAATTCTGAGTaGCAGAGACTACTCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NAWYLGRNLELPFWGESNTQNSE*QRLLWG Trigger: ACCCCAGAGTAGTCTCTGTCACTCAGAATTCTGGGT...ATTGCTTTCACCCCAAAATGGCAGTTCTAGATTACGTCCTAGGTACCAGGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR TCA 90 bp | GACCAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCTAGCTATCACATGCTaGCAAGTCAAAATGTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: DQELSGAQILWQRPVPCLLAITC*QVKMYN Trigger: GTTGTACATTTTGACTTGTCAGCATGTGATAGCTAG...CAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGTGCTTGCTCTCCATAACTCAAGACCAGGAACTCTCAGGTGCACAAATTGAGAGTGTTGAGTGCTaGATACAAGCTGCTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NQCLLSITQDQELSGAQIESVEC*IQAACL Trigger: GAGACAAGCAGCTTGTATGCAGCACTCAACACTCTC...AATTTGTGCACCTGAGAGTTCCTGGTCTTGAGTTATGGAGAGCAAGCACTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCAGAAAAACAGAAGCCTaGTTCCTCTCTTGCTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TRNSQVHKFYGRDQFLACRKTEA*FLSCLK Trigger: TTTCAAGCAAGAGAGGAAGCAGGCTTCTGTTTTTCT...GCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCTCAATCAACCCACTATGTaGCACAGGTCTTATTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: QELSGAQILWQRPVPCLLNQPTM*HRSYSM Trigger: CATAGAATAAGACCTGTGCCACATAGTGGGTTGATT...GAGCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR TCA 90 bp | AACCAGTGCTTGCTCTCCATAACTCAAGACCAGGAACTCTCAGGTGCACAAATTTTGTTCCCCTCTTTCTaGAGTTCTCCACACTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NQCLLSITQDQELSGAQILFPSF*SSPHFR Trigger: TCTGAAGTGTGGAGAACTTCAGAAAGAGGGGAACAA...AATTTGTGCACCTGAGAGTTCCTGGTCTTGAGTTATGGAGAGCAAGCACTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR TCA 90 bp | GACCAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGTACTCTTCTAGCTTATaGAAGTTTCTGTTCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DQELSGAQILWQRPVPCLYSSSL*KFLFSD Trigger: GTCAGAGAACAGAAACTTTCATAAGCTAGAAGAGTA...CAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR TCA 90 bp | CAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCTCTACTCTTCTAGCTTATaGAAGTTTCTGTTCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QELSGAQILWQRPVPCLLYSSSL*KFLFSD Trigger: GTCAGAGAACAGAAACTTTCATAAGCTAGAAGAGTA...GAGCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGTGCTTGCTCTCCATAACTCAAGACCAGGAACTCTCAGGTGCACAAATTACTGAGAGTGTTGAGTaGTGCATACAAGCTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NQCLLSITQDQELSGAQITESVE*CIQAAC Trigger: ACAAGCAGCTTGTATGCAGCACTCAACACTCTCAGT...AATTTGTGCACCTGAGAGTTCCTGGTCTTGAGTTATGGAGAGCAAGCACTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR GCA 90 bp | ATGAATCTTTTGGCCAACAACTCCAGTTTCTATGCTCTGAACTTTCTCACATCGGTGATGCCAGCAGCATaGATGGCCACCAATGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: MNLLANNSSFYALNFLTSVMPAA*MATNEP Trigger: TGGTTCATTGGTGGCCATGCATGCTGCTGGCATCAC...CGATGTGAGAAAGTTCAGAGCATAGAAACTGGAGTTGTTGGCCAAAAGATTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGTGCTTGCTCTCCATAACTCAAGACCAGGAACTCTCAGGTGCACAAATTGGTGAAAGTGGTCTTTaGTCCCTGGTGTTGGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: NQCLLSITQDQELSGAQIGESGL*SLVLVI Trigger: TATAACCAACACCAGGGACCAAAGACCACTTTCACC...AATTTGTGCACCTGAGAGTTCCTGGTCTTGAGTTATGGAGAGCAAGCACTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGTGCTTGCTCTCCATAACTCAAGACCAGGAACTCTCAGGTGCACAAATTTTGGAAACTCCAGCCTaGTATGTACAAGTGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NQCLLSITQDQELSGAQILETPA*YVQVMP Trigger: TGGCATCACTTGTACATACCAGGCTGGAGTTTCCAA...AATTTGTGCACCTGAGAGTTCCTGGTCTTGAGTTATGGAGAGCAAGCACTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR TCA 90 bp | CCTTGCCTGCTCAATGATTTCCAAAACCATTCCTTGAAGGTTAATTTCAGATCCACCCAGAATTCTGAGTaGCAGAGACTACTCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PCLLNDFQNHSLKVNFRSTQNSE*QRLLWG Trigger: ACCCCAGAGTAGTCTCTGTCACTCAGAATTCTGGGT...GGATCTGAAATTAACCTTCAAGGAATGGTTTTGGAAATCATTGAGCAGGCAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR TCA 90 bp | AACCAGTGCTTGCTCTCCATAACTCAAGACCAGGAACTCTCAGGTGCACAAATTAAAGTTTCTGTTCTCTaGCCCAGAATTCTGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: NQCLLSITQDQELSGAQIKVSVL*PRILSD Trigger: GTCACTCAGAATTCTGGGTCAGAGAACAGAAACTTT...AATTTGTGCACCTGAGAGTTCCTGGTCTTGAGTTATGGAGAGCAAGCACTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGTGCTTGCTCTCCATAACTCAAGACCAGGAACTCTCAGGTGCACAAATTCTTCAATTCCTTCTTTaGCACACACCAGCATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NQCLLSITQDQELSGAQILQFLL*HTPAFL Trigger: GAGAAATGCTGGTGTGTGGCAAAGAAGGAATTGAAG...AATTTGTGCACCTGAGAGTTCCTGGTCTTGAGTTATGGAGAGCAAGCACTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCCCAAAGTGTTCTTTATaGACTTTGAATAAGGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TRNSQVHKFYGRDQFLACPKCSL*TLNKEA Trigger: AGCTTCCTTATTCAAAGTGCATAAAGAACACTTTGG...GCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGTGCTTGCTCTCCATAACTCAAGACCAGGAACTCTCAGGTGCACAAATTGCCTGCTTCCTCTCTTaGTTGAAAATTTTCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: NQCLLSITQDQELSGAQIACFLS*LKIFLT Trigger: TGTCAGGAAAATTTTCAAGCAAGAGAGGAAGCAGGC...AATTTGTGCACCTGAGAGTTCCTGGTCTTGAGTTATGGAGAGCAAGCACTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGTGCTTGCTCTCCATAACTCAAGACCAGGAACTCTCAGGTGCACAAATTATTAGAATCAAATACTaGGGATCCAGAAGACCCACC | + |
|
Preference number: 4 (lower is better) Translates to: NQCLLSITQDQELSGAQIIRIKY*GSRRPT Trigger: GGTGGGTCTTCTGGATCCCCAGTATTTGATTCTAAT...AATTTGTGCACCTGAGAGTTCCTGGTCTTGAGTTATGGAGAGCAAGCACTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR TCA 90 bp | AATGCCTGGTACCTAGGACGTAATCTAGAACTGCCATTTTGGGGTGAAAGCAATCCTCAGGATGGCCAATaGTATAAATCAACCCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: NAWYLGRNLELPFWGESNPQDGQ*YKSTHY Trigger: ATAGTGGGTTGATTTATATCATTGGCCATCCTGAGG...ATTGCTTTCACCCCAAAATGGCAGTTCTAGATTACGTCCTAGGTACCAGGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR TCA 90 bp | AATGCCTGGTACCTAGGACGTAATCTAGAACTGCCATTTTGGGGTGAAAGCAATACCACATCAGAGTTGTaGAGCATTTCCTGGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: NAWYLGRNLELPFWGESNTTSEL*SISWKL Trigger: AAGTTTCCAGGAAATGCTTCACAACTCTGATGTGGT...ATTGCTTTCACCCCAAAATGGCAGTTCTAGATTACGTCCTAGGTACCAGGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR GCA 90 bp | CCTTGCCTGCTCAATGATTTCCAAAACCATTCCTTGAAGGTTAATTTCAGATCCGAGAGTGTTGAGTGCTaGATACAAGCTGCTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PCLLNDFQNHSLKVNFRSESVEC*IQAACL Trigger: GAGACAAGCAGCTTGTATGCAGCACTCAACACTCTC...GGATCTGAAATTAACCTTCAAGGAATGGTTTTGGAAATCATTGAGCAGGCAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR GCA 90 bp | ATGAATCTTTTGGCCAACAACTCCAGTTTCTATGCTCTGAACTTTCTCACATCGGAGAGTGTTGAGTGCTaGATACAAGCTGCTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: MNLLANNSSFYALNFLTSESVEC*IQAACL Trigger: GAGACAAGCAGCTTGTATGCAGCACTCAACACTCTC...CGATGTGAGAAAGTTCAGAGCATAGAAACTGGAGTTGTTGGCCAAAAGATTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR CCA 90 bp | ATGAATCTTTTGGCCAACAACTCCAGTTTCTATGCTCTGAACTTTCTCACATCGGTGGTCTTTGGTCCCTaGTGTTGGTTATATCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MNLLANNSSFYALNFLTSVVFGP*CWLYPL Trigger: CAAGGGATATAACCAACACCAGGGACCAAAGACCAC...CGATGTGAGAAAGTTCAGAGCATAGAAACTGGAGTTGTTGGCCAAAAGATTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR CCA 90 bp | AACCAGTGCTTGCTCTCCATAACTCAAGACCAGGAACTCTCAGGTGCACAAATTAATCAACCCACTATGTaGCACAGGTCTTATTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: NQCLLSITQDQELSGAQINQPTM*HRSYSM Trigger: CATAGAATAAGACCTGTGCCACATAGTGGGTTGATT...AATTTGTGCACCTGAGAGTTCCTGGTCTTGAGTTATGGAGAGCAAGCACTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR CCA 90 bp | AATGCCTGGTACCTAGGACGTAATCTAGAACTGCCATTTTGGGGTGAAAGCAATATTAGAATCAAATACTaGGGATCCAGAAGACCCACC | + |
|
Preference number: 4 (lower is better) Translates to: NAWYLGRNLELPFWGESNIRIKY*GSRRPT Trigger: GGTGGGTCTTCTGGATCCCCAGTATTTGATTCTAAT...ATTGCTTTCACCCCAAAATGGCAGTTCTAGATTACGTCCTAGGTACCAGGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR TCA 90 bp | CCTTGCCTGCTCAATGATTTCCAAAACCATTCCTTGAAGGTTAATTTCAGATCCTTGTTCCCCTCTTTCTaGAGTTCTCCACACTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PCLLNDFQNHSLKVNFRSLFPSF*SSPHFR Trigger: TCTGAAGTGTGGAGAACTTCAGAAAGAGGGGAACAA...GGATCTGAAATTAACCTTCAAGGAATGGTTTTGGAAATCATTGAGCAGGCAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR TCA 90 bp | AATGCCTGGTACCTAGGACGTAATCTAGAACTGCCATTTTGGGGTGAAAGCAATCTAGCTATCACATGCTaGCAAGTCAAAATGTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: NAWYLGRNLELPFWGESNLAITC*QVKMYN Trigger: GTTGTACATTTTGACTTGTCAGCATGTGATAGCTAG...ATTGCTTTCACCCCAAAATGGCAGTTCTAGATTACGTCCTAGGTACCAGGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS-3UTR TCA 90 bp | AATGCCTGGTACCTAGGACGTAATCTAGAACTGCCATTTTGGGGTGAAAGCAATATGCATGGCCACCAATaGACCATTAGAATCAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: NAWYLGRNLELPFWGESNMHGHQ*TIRIKY Trigger: GTATTTGATTCTAATGGTTCATTGGTGGCCATGCAT...ATTGCTTTCACCCCAAAATGGCAGTTCTAGATTACGTCCTAGGTACCAGGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CCA 90 bp | AATGCCTGGTACCTAGGACGTAATCTAGAACTGCCATTTTGGGGTGAAAGCAATAATCAACCCACTATGTaGCACAGGTCTTATTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: NAWYLGRNLELPFWGESNNQPTM*HRSYSM Trigger: CATAGAATAAGACCTGTGCCACATAGTGGGTTGATT...ATTGCTTTCACCCCAAAATGGCAGTTCTAGATTACGTCCTAGGTACCAGGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGCCTGCTCAATGATTTCCAAAACCATTCCTTGAAGGTTAATTTCAGATCCTTGGAAACTCCAGCCTaGTATGTACAAGTGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PCLLNDFQNHSLKVNFRSLETPA*YVQVMP Trigger: TGGCATCACTTGTACATACCAGGCTGGAGTTTCCAA...GGATCTGAAATTAACCTTCAAGGAATGGTTTTGGAAATCATTGAGCAGGCAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR TCA 90 bp | AGGATCTCCGAGACCACATTAGCACTTAATTTTCTTTTCCATGTTACCTTACATTCTGACCCAGAATTCTaGGTGACAGAGACTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RISETTLALNFLFHVTLHSDPEF*VTETTL Trigger: CAGAGTAGTCTCTGTCACTCAGAATTCTGGGTCAGA...ATGTAAGGTAACATGGAAAAGAAAATTAAGTGCTAATGTGGTCTCGGAGATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR TCA 90 bp | CAAATGAGTATGTTTGAAATTGGTTCAAGTTTCCAGAAGCATGGTAGGCTTCTTTCTGACCCAGAATTCTaGGTGACAGAGACTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QMSMFEIGSSFQKHGRLLSDPEF*VTETTL Trigger: CAGAGTAGTCTCTGTCACTCAGAATTCTGGGTCAGA...AAGAAGCCTACCATGCTTCTGGAAACTTGAACCAATTTCAAACATACTCATTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGCCTGCTCAATGATTTCCAAAACCATTCCTTGAAGGTTAATTTCAGATCCGTCACCTTTACACACTaGCTAATTATGTTTGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PCLLNDFQNHSLKVNFRSVTFTH*LIMFAH Trigger: GTGGGCAAACATAATTAGTCAGTGTGTAAAGGTGAC...GGATCTGAAATTAACCTTCAAGGAATGGTTTTGGAAATCATTGAGCAGGCAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR TCA 90 bp | ATGAATCTTTTGGCCAACAACTCCAGTTTCTATGCTCTGAACTTTCTCACATCGACCACATCAGAGTTGTaGAGCATTTCCTGGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: MNLLANNSSFYALNFLTSTTSEL*SISWKL Trigger: AAGTTTCCAGGAAATGCTTCACAACTCTGATGTGGT...CGATGTGAGAAAGTTCAGAGCATAGAAACTGGAGTTGTTGGCCAAAAGATTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR GCA 90 bp | ATGAATCTTTTGGCCAACAACTCCAGTTTCTATGCTCTGAACTTTCTCACATCGCTTCAATTCCTTCTTTaGCACACACCAGCATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: MNLLANNSSFYALNFLTSLQFLL*HTPAFL Trigger: GAGAAATGCTGGTGTGTGGCAAAGAAGGAATTGAAG...CGATGTGAGAAAGTTCAGAGCATAGAAACTGGAGTTGTTGGCCAAAAGATTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGCCTGCTCAATGATTTCCAAAACCATTCCTTGAAGGTTAATTTCAGATCCCTTCAATTCCTTCTTTaGCACACACCAGCATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PCLLNDFQNHSLKVNFRSLQFLL*HTPAFL Trigger: GAGAAATGCTGGTGTGTGGCAAAGAAGGAATTGAAG...GGATCTGAAATTAACCTTCAAGGAATGGTTTTGGAAATCATTGAGCAGGCAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGCCTGCTCAATGATTTCCAAAACCATTCCTTGAAGGTTAATTTCAGATCCGCCTGCTTCCTCTCTTaGTTGAAAATTTTCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PCLLNDFQNHSLKVNFRSACFLS*LKIFLT Trigger: TGTCAGGAAAATTTTCAAGCAAGAGAGGAAGCAGGC...GGATCTGAAATTAACCTTCAAGGAATGGTTTTGGAAATCATTGAGCAGGCAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGCCTGCTCAATGATTTCCAAAACCATTCCTTGAAGGTTAATTTCAGATCCCCACTTTTACTGTGTTaGGGTCATTCTGCTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PCLLNDFQNHSLKVNFRSPLLLC*GHSALL Trigger: AAGAAGAGCAGAATGACCCCAACACAGTAAAAGTGG...GGATCTGAAATTAACCTTCAAGGAATGGTTTTGGAAATCATTGAGCAGGCAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 |
||
| CDS-3UTR CCA 90 bp | ATGAATCTTTTGGCCAACAACTCCAGTTTCTATGCTCTGAACTTTCTCACATCGATTAGAATCAAATACTaGGGATCCAGAAGACCCACC | + |
|
Preference number: 4 (lower is better) Translates to: MNLLANNSSFYALNFLTSIRIKY*GSRRPT Trigger: GGTGGGTCTTCTGGATCCCCAGTATTTGATTCTAAT...CGATGTGAGAAAGTTCAGAGCATAGAAACTGGAGTTGTTGGCCAAAAGATTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR GCA 90 bp | CAAATGAGTATGTTTGAAATTGGTTCAAGTTTCCAGAAGCATGGTAGGCTTCTTACTGAGAGTGTTGAGTaGTGCATACAAGCTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QMSMFEIGSSFQKHGRLLTESVE*CIQAAC Trigger: ACAAGCAGCTTGTATGCAGCACTCAACACTCTCAGT...AAGAAGCCTACCATGCTTCTGGAAACTTGAACCAATTTCAAACATACTCATTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR GCA 90 bp | AATGCCTGGTACCTAGGACGTAATCTAGAACTGCCATTTTGGGGTGAAAGCAATCCAAAGTGTTCTTTATaGACTTTGAATAAGGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NAWYLGRNLELPFWGESNPKCSL*TLNKEA Trigger: AGCTTCCTTATTCAAAGTGCATAAAGAACACTTTGG...ATTGCTTTCACCCCAAAATGGCAGTTCTAGATTACGTCCTAGGTACCAGGCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR TCA 90 bp | CAAATGAGTATGTTTGAAATTGGTTCAAGTTTCCAGAAGCATGGTAGGCTTCTTCACCCAAGGTTACTGTaGTTTTCTTATTTAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QMSMFEIGSSFQKHGRLLHPRLL*FSYLGE Trigger: CTCCCCTAAATAAGAAAATCACAGTAACCTTGGGTG...AAGAAGCCTACCATGCTTCTGGAAACTTGAACCAATTTCAAACATACTCATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR TCA 90 bp | CAAATGAGTATGTTTGAAATTGGTTCAAGTTTCCAGAAGCATGGTAGGCTTCTTAAAGTTTCTGTTCTCTaGCCCAGAATTCTGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QMSMFEIGSSFQKHGRLLKVSVL*PRILSD Trigger: GTCACTCAGAATTCTGGGTCAGAGAACAGAAACTTT...AAGAAGCCTACCATGCTTCTGGAAACTTGAACCAATTTCAAACATACTCATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGCCTGCTCAATGATTTCCAAAACCATTCCTTGAAGGTTAATTTCAGATCCTACTCTTCTAGCTTATaGAAGTTTCTGTTCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PCLLNDFQNHSLKVNFRSYSSSL*KFLFSD Trigger: GTCAGAGAACAGAAACTTTCATAAGCTAGAAGAGTA...GGATCTGAAATTAACCTTCAAGGAATGGTTTTGGAAATCATTGAGCAGGCAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR TCA 90 bp | AGGATCTCCGAGACCACATTAGCACTTAATTTTCTTTTCCATGTTACCTTACATCCTCAGGATGGCCAATaGTATAAATCAACCCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: RISETTLALNFLFHVTLHPQDGQ*YKSTHY Trigger: ATAGTGGGTTGATTTATATCATTGGCCATCCTGAGG...ATGTAAGGTAACATGGAAAAGAAAATTAAGTGCTAATGTGGTCTCGGAGATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| 3UTR CAA 72 bp | ATGTCTTCTGTATGTAAGGTCTCATTGACTCTGATTTaGATGAGATTACTTCTTGAACACCGCGTCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MSSVCKVSLTLI*MRLLLEHRVLS Trigger: AGAAAGGACGCGGTGTTCAAGAAGTAATCTCATCAAAATCAGAGTCAATGAGACCTTACATACAGAAGACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR TCA 90 bp | AGGATCTCCGAGACCACATTAGCACTTAATTTTCTTTTCCATGTTACCTTACATAATCGTCACTCTCTATaGAAGTACAAAACCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RISETTLALNFLFHVTLHNRHSL*KYKTCH Trigger: ATGGCAGGTTTTGTACTTTCATAGAGAGTGACGATT...ATGTAAGGTAACATGGAAAAGAAAATTAAGTGCTAATGTGGTCTCGGAGATCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR TCA 90 bp | CAAATGAGTATGTTTGAAATTGGTTCAAGTTTCCAGAAGCATGGTAGGCTTCTTCTAGCTATCACATGCTaGCAAGTCAAAATGTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: QMSMFEIGSSFQKHGRLLLAITC*QVKMYN Trigger: GTTGTACATTTTGACTTGTCAGCATGTGATAGCTAG...AAGAAGCCTACCATGCTTCTGGAAACTTGAACCAATTTCAAACATACTCATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR TCA 90 bp | CAAATGAGTATGTTTGAAATTGGTTCAAGTTTCCAGAAGCATGGTAGGCTTCTTATGCATGGCCACCAATaGACCATTAGAATCAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: QMSMFEIGSSFQKHGRLLMHGHQ*TIRIKY Trigger: GTATTTGATTCTAATGGTTCATTGGTGGCCATGCAT...AAGAAGCCTACCATGCTTCTGGAAACTTGAACCAATTTCAAACATACTCATTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGCCTGCTCAATGATTTCCAAAACCATTCCTTGAAGGTTAATTTCAGATCCCCAAAGTGTTCTTTATaGACTTTGAATAAGGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PCLLNDFQNHSLKVNFRSPKCSL*TLNKEA Trigger: AGCTTCCTTATTCAAAGTGCATAAAGAACACTTTGG...GGATCTGAAATTAACCTTCAAGGAATGGTTTTGGAAATCATTGAGCAGGCAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR GCA 90 bp | CAAATGAGTATGTTTGAAATTGGTTCAAGTTTCCAGAAGCATGGTAGGCTTCTTAGAAAAACAGAAGCCTaGTTCCTCTCTTGCTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QMSMFEIGSSFQKHGRLLRKTEA*FLSCLK Trigger: TTTCAAGCAAGAGAGGAAGCAGGCTTCTGTTTTTCT...AAGAAGCCTACCATGCTTCTGGAAACTTGAACCAATTTCAAACATACTCATTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR GCA 90 bp | AGGATCTCCGAGACCACATTAGCACTTAATTTTCTTTTCCATGTTACCTTACATAGAAAAACAGAAGCCTaGTTCCTCTCTTGCTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RISETTLALNFLFHVTLHRKTEA*FLSCLK Trigger: TTTCAAGCAAGAGAGGAAGCAGGCTTCTGTTTTTCT...ATGTAAGGTAACATGGAAAAGAAAATTAAGTGCTAATGTGGTCTCGGAGATCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| 3UTR CAA 72 bp | TTCACTATGTTTAATGGTGATTCATCTGTATTTGATTaGGGAACAATACATTGGGCAGGGGACACAAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: FTMFNGDSSVFD*GTIHWAGDTKY Trigger: ATATTTTGTGTCCCCTGCCCAATGTATTGTTCCCAAATCAAATACAGATGAATCACCATTAAACATAGTGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CAA 90 bp | ACCAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCCCTGCATTTCCATTGTaGTTCCACCATAGGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: TRNSQVHKFYGRDQFLACPAFPL*FHHRNP Trigger: TGGGTTCCTATGGTGGAACAACAATGGAAATGCAGG...GCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CAA 90 bp | CAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCTCCAGCCTGCATTTCCATaGTTGTTCCACCATAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QELSGAQILWQRPVPCLLQPAFP*LFHHRN Trigger: GTTCCTATGGTGGAACAACAATGGAAATGCAGGCTG...GAGCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS TCA 90 bp | AGCCTGGTATGTACAAGTGATGCCAGCAGCATGCATGGCCACCAATaGACCATTAGAATCAAATACTGGGGATCCAGAAGACCCACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SLVCTSDASSMHGHQ*TIRIKYWGSRRPTK Trigger: TTTGGTGGGTCTTCTGGATCCCCAGTATTTGATTCTAATGGTTCATTGGTGGCCATGCATGCTGCTGGCATCACTTGTACATACCAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CAA 90 bp | CAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCTCCATTTCTCTGCCCTTTaGACTTTCTACCTCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QELSGAQILWQRPVPCLLHFSAL*TFYLFS Trigger: AGAGAAGAGGTAGAAAGTCAAAAGGGCAGAGAAATG...GAGCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS GCA 90 bp | AGCAGACGGGCATGCCAAGGTTTAAGTACCCTTCAATTCCTTCTTTaGCACACACCAGCATTTCTCTGCCCTTTTGACTTTCTACCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SRRACQGLSTLQFLL*HTPAFLCPFDFLPL Trigger: AAGAGGTAGAAAGTCAAAAGGGCAGAGAAATGCTGGTGTGTGGCAAAGAAGGAATTGAAGGGTACTTAAACCTTGGCATGCCCGTCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS GCA 90 bp | TTGACTTTCTACCTCTTCTCTGACAGCACTGAGAGTGTTGAGTGCTaGATACAAGCTGCTTGTCTCCCTACACGTGAGCTCATATTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LTFYLFSDSTESVEC*IQAACLPTRELIFH Trigger: ATGAAATATGAGCTCACGTGTAGGGAGACAAGCAGCTTGTATGCAGCACTCAACACTCTCAGTGCTGTCAGAGAAGAGGTAGAAAGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS GCA 90 bp | CTTTTGACTTTCTACCTCTTCTCTGACAGCACTGAGAGTGTTGAGTaGTGCATACAAGCTGCTTGTCTCCCTACACGTGAGCTCATATTT | + |
|
Preference number: 5 (lower is better) Translates to: LLTFYLFSDSTESVE*CIQAACLPTRELIF Trigger: AAATATGAGCTCACGTGTAGGGAGACAAGCAGCTTGTATGCAGCACTCAACACTCTCAGTGCTGTCAGAGAAGAGGTAGAAAGTCAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CAA 90 bp | AATGCCTGGTACCTAGGACGTAATCTAGAACTGCCATTTTGGGGTGAAAGCAATCCTGCATTTCCATTGTaGTTCCACCATAGGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: NAWYLGRNLELPFWGESNPAFPL*FHHRNP Trigger: TGGGTTCCTATGGTGGAACAACAATGGAAATGCAGG...ATTGCTTTCACCCCAAAATGGCAGTTCTAGATTACGTCCTAGGTACCAGGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CAA 90 bp | AATGCCTGGTACCTAGGACGTAATCTAGAACTGCCATTTTGGGGTGAAAGCAATTGTTTGCCCACTCACTaGAATCTATGCCTTCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: NAWYLGRNLELPFWGESNCLPTH*NLCLHP Trigger: TGGGTGAAGGCATAGATTCAAGTGAGTGGGCAAACA...ATTGCTTTCACCCCAAAATGGCAGTTCTAGATTACGTCCTAGGTACCAGGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CAA 90 bp | CAGGAACTCTCAGGTGCACAAATTCTATGGCAGAGACCAGTTCCTTGCCTGCTCTGCTTCCTCTCTTGCTaGAAAATTTTCCTGACATTT | + |
|
Preference number: 5 (lower is better) Translates to: QELSGAQILWQRPVPCLLCFLSC*KIFLTF Trigger: AAATGTCAGGAAAATTTTCAAGCAAGAGAGGAAGCA...GAGCAGGCAAGGAACTGGTCTCTGCCATAGAATTTGTGCACCTGAGAGTTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS CCA 90 bp | CTTTTCTCCCTCAGGATGGCCAATGATATAAATCAACCCACTATGTaGCACAGGTCTTATTCTATGATACAGCCCAGCAGGTACTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LFSLRMANDINQPTM*HRSYSMIQPSRYFL Trigger: CAAGAAGTACCTGCTGGGCTGTATCATAGAATAAGACCTGTGCCACATAGTGGGTTGATTTATATCATTGGCCATCCTGAGGGAGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CAA 90 bp | AACCAGTGCTTGCTCTCCATAACTCAAGACCAGGAACTCTCAGGTGCACAAATTCATTTCTCTGCCCTTTaGACTTTCTACCTCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NQCLLSITQDQELSGAQIHFSAL*TFYLFS Trigger: AGAGAAGAGGTAGAAAGTCAAAAGGGCAGAGAAATG...AATTTGTGCACCTGAGAGTTCCTGGTCTTGAGTTATGGAGAGCAAGCACTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS CCA 90 bp | GATTCCATAATAGAACCAAACTCAATGATATTGGAAACTCCAGCCTaGTATGTACAAGTGATGCCAGCAGCATGCATGGCCACCAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: DSIIEPNSMILETPA*YVQVMPAACMATNE Trigger: TTCATTGGTGGCCATGCATGCTGCTGGCATCACTTGTACATACCAGGCTGGAGTTTCCAATATCATTGAGTTTGGTTCTATTATGGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CAA 90 bp | ATGAATCTTTTGGCCAACAACTCCAGTTTCTATGCTCTGAACTTTCTCACATCGCAGCCTGCATTTCCATaGTTGTTCCACCATAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: MNLLANNSSFYALNFLTSQPAFP*LFHHRN Trigger: GTTCCTATGGTGGAACAACAATGGAAATGCAGGCTG...CGATGTGAGAAAGTTCAGAGCATAGAAACTGGAGTTGTTGGCCAAAAGATTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CAA 90 bp | CCTTGCCTGCTCAATGATTTCCAAAACCATTCCTTGAAGGTTAATTTCAGATCCTGTTTGCCCACTCACTaGAATCTATGCCTTCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: PCLLNDFQNHSLKVNFRSCLPTH*NLCLHP Trigger: TGGGTGAAGGCATAGATTCAAGTGAGTGGGCAAACA...GGATCTGAAATTAACCTTCAAGGAATGGTTTTGGAAATCATTGAGCAGGCAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CAA 90 bp | AATGCCTGGTACCTAGGACGTAATCTAGAACTGCCATTTTGGGGTGAAAGCAATTTTTCTTCTACTACTTaGAGGGACCACTGTACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: NAWYLGRNLELPFWGESNFSSTT*RDHCTA Trigger: TGCTGTACAGTGGTCCCTCAAAGTAGTAGAAGAAAA...ATTGCTTTCACCCCAAAATGGCAGTTCTAGATTACGTCCTAGGTACCAGGCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS TCA 90 bp | AAAGGTCACCTTTACACACTGACTAATTATGTTTGCCCACTCACTTaGATCTATGCCTTCACCCACAATGCTAGCTATCACATGCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: KGHLYTLTNYVCPLT*IYAFTHNASYHMLT Trigger: TGTCAGCATGTGATAGCTAGCATTGTGGGTGAAGGCATAGATTCAAGTGAGTGGGCAAACATAATTAGTCAGTGTGTAAAGGTGACCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CAA 90 bp | AACCAGTGCTTGCTCTCCATAACTCAAGACCAGGAACTCTCAGGTGCACAAATTTGCTTCCTCTCTTGCTaGAAAATTTTCCTGACATTT | + |
|
Preference number: 5 (lower is better) Translates to: NQCLLSITQDQELSGAQICFLSC*KIFLTF Trigger: AAATGTCAGGAAAATTTTCAAGCAAGAGAGGAAGCA...AATTTGTGCACCTGAGAGTTCCTGGTCTTGAGTTATGGAGAGCAAGCACTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CAA 90 bp | CCTTGCCTGCTCAATGATTTCCAAAACCATTCCTTGAAGGTTAATTTCAGATCCCATTTCTCTGCCCTTTaGACTTTCTACCTCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PCLLNDFQNHSLKVNFRSHFSAL*TFYLFS Trigger: AGAGAAGAGGTAGAAAGTCAAAAGGGCAGAGAAATG...GGATCTGAAATTAACCTTCAAGGAATGGTTTTGGAAATCATTGAGCAGGCAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CAA 90 bp | AGGATCTCCGAGACCACATTAGCACTTAATTTTCTTTTCCATGTTACCTTACATCCTGCATTTCCATTGTaGTTCCACCATAGGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: RISETTLALNFLFHVTLHPAFPL*FHHRNP Trigger: TGGGTTCCTATGGTGGAACAACAATGGAAATGCAGG...ATGTAAGGTAACATGGAAAAGAAAATTAAGTGCTAATGTGGTCTCGGAGATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CAA 90 bp | CAAATGAGTATGTTTGAAATTGGTTCAAGTTTCCAGAAGCATGGTAGGCTTCTTCAGCCTGCATTTCCATaGTTGTTCCACCATAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QMSMFEIGSSFQKHGRLLQPAFP*LFHHRN Trigger: GTTCCTATGGTGGAACAACAATGGAAATGCAGGCTG...AAGAAGCCTACCATGCTTCTGGAAACTTGAACCAATTTCAAACATACTCATTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CAA 90 bp | CAAATGAGTATGTTTGAAATTGGTTCAAGTTTCCAGAAGCATGGTAGGCTTCTTTGTTTGCCCACTCACTaGAATCTATGCCTTCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: QMSMFEIGSSFQKHGRLLCLPTH*NLCLHP Trigger: TGGGTGAAGGCATAGATTCAAGTGAGTGGGCAAACA...AAGAAGCCTACCATGCTTCTGGAAACTTGAACCAATTTCAAACATACTCATTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CAA 90 bp | ATGAATCTTTTGGCCAACAACTCCAGTTTCTATGCTCTGAACTTTCTCACATCGTTTTCTTCTACTACTTaGAGGGACCACTGTACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: MNLLANNSSFYALNFLTSFSSTT*RDHCTA Trigger: TGCTGTACAGTGGTCCCTCAAAGTAGTAGAAGAAAA...CGATGTGAGAAAGTTCAGAGCATAGAAACTGGAGTTGTTGGCCAAAAGATTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS TCA 90 bp | TCACTTGAATCTATGCCTTCACCCACAATGCTAGCTATCACATGCTaGCAAGTCAAAATGTACAACTCTTTAAAAACAAAGCAGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLESMPSPTMLAITC*QVKMYNSLKTKQVA Trigger: TGCCACCTGCTTTGTTTTTAAAGAGTTGTACATTTTGACTTGTCAGCATGTGATAGCTAGCATTGTGGGTGAAGGCATAGATTCAAGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
||
| CDS-3UTR CAA 90 bp | AGGATCTCCGAGACCACATTAGCACTTAATTTTCTTTTCCATGTTACCTTACATTCCACTTTTACTGTGTaGGGGTCATTCTGCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RISETTLALNFLFHVTLHSTFTV*GSFCSS Trigger: AGAAGAGCAGAATGACCCCAACACAGTAAAAGTGGA...ATGTAAGGTAACATGGAAAAGAAAATTAAGTGCTAATGTGGTCTCGGAGATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 |
||
| CDS-3UTR CAA 90 bp | CAAATGAGTATGTTTGAAATTGGTTCAAGTTTCCAGAAGCATGGTAGGCTTCTTTCCACTTTTACTGTGTaGGGGTCATTCTGCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QMSMFEIGSSFQKHGRLLSTFTV*GSFCSS Trigger: AGAAGAGCAGAATGACCCCAACACAGTAAAAGTGGA...AAGAAGCCTACCATGCTTCTGGAAACTTGAACCAATTTCAAACATACTCATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 |
||
| CDS-3UTR CAA 90 bp | CCTTGCCTGCTCAATGATTTCCAAAACCATTCCTTGAAGGTTAATTTCAGATCCTGCTTCCTCTCTTGCTaGAAAATTTTCCTGACATTT | + |
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Preference number: 5 (lower is better) Translates to: PCLLNDFQNHSLKVNFRSCFLSC*KIFLTF Trigger: AAATGTCAGGAAAATTTTCAAGCAAGAGAGGAAGCA...GGATCTGAAATTAACCTTCAAGGAATGGTTTTGGAAATCATTGAGCAGGCAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS GCA 72 bp | TACCTCTTCTCTGACAGCACTGAGAGTGTTGAGTGCTaGATACAAGCTGCTTGTCTCCCTACACGTGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: YLFSDSTESVEC*IQAACLPTREL Trigger: GAGCTCACGTGTAGGGAGACAAGCAGCTTGTATGCAGCACTCAACACTCTCAGTGCTGTCAGAGAAGAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS TCA 72 bp | CCTTCTTTGCCACACACCAGCATTTCTCTGCCCTTTTaGCTTTCTACCTCTTCTCTGACAGCACTGAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: PSLPHTSISLPF*LSTSSLTALRV Trigger: CACTCTCAGTGCTGTCAGAGAAGAGGTAGAAAGTCAAAAGGGCAGAGAAATGCTGGTGTGTGGCAAAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS TCA 72 bp | ACTACTCTGGGGTTCTTTGGTAGCTCAGCTGCAACCTaGAAAAGCTTGCCCTCTAACTCATCAACTGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: TTLGFFGSSAAT*KSLPSNSSTGC Trigger: ACAGCCAGTTGATGAGTTAGAGGGCAAGCTTTTTCAGGTTGCAGCTGAGCTACCAAAGAACCCCAGAGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS CCA 72 bp | TATTTAGGGGAGGAGTCTGATCTTGTCGAGTTTTCCTaGGTGAAAGTGGTCTTTGGTCCCTGGTGTTGGTTA | + |
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Preference number: 6 (lower is better) Translates to: YLGEESDLVEFS*VKVVFGPWCWL Trigger: TAACCAACACCAGGGACCAAAGACCACTTTCACCCAGGAAAACTCGACAAGATCAGACTCCTCCCCTAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS TCA 72 bp | TGTACAAGTGATGCCAGCAGCATGCATGGCCACCAATaGACCATTAGAATCAAATACTGGGGATCCAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: CTSDASSMHGHQ*TIRIKYWGSRR Trigger: TCTTCTGGATCCCCAGTATTTGATTCTAATGGTTCATTGGTGGCCATGCATGCTGCTGGCATCACTTGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS CCA 72 bp | CTCAGGATGGCCAATGATATAAATCAACCCACTATGTaGCACAGGTCTTATTCTATGATACAGCCCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LRMANDINQPTM*HRSYSMIQPSR Trigger: CCTGCTGGGCTGTATCATAGAATAAGACCTGTGCCACATAGTGGGTTGATTTATATCATTGGCCATCCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS CCA 72 bp | ATAGAACCAAACTCAATGATATTGGAAACTCCAGCCTaGTATGTACAAGTGATGCCAGCAGCATGCATGGCC | + |
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Preference number: 6 (lower is better) Translates to: IEPNSMILETPA*YVQVMPAACMA Trigger: GGCCATGCATGCTGCTGGCATCACTTGTACATACCAGGCTGGAGTTTCCAATATCATTGAGTTTGGTTCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS CAA 90 bp | ATGTGGCACAGGTCTTATTCTATGATACAGCCCAGCAGGTACTTCTaGTCCATTTTCCTTCAGTTCCAGGACAGCATAGTCAAGGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: MWHRSYSMIQPSRYF*SIFLQFQDSIVKVF Trigger: AAACACCTTGACTATGCTGTCCTGGAACTGAAGGAAAATGGACAAGAAGTACCTGCTGGGCTGTATCATAGAATAAGACCTGTGCCACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS TCA 72 bp | TATGAAAGTTTCTGTTCTCTGACCCAGAATTCTGAGTaGCAGAGACTACTCTGGGGTTCTTTGGTAGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: YESFCSLTQNSE*QRLLWGSLVAQ Trigger: CTGAGCTACCAAAGAACCCCAGAGTAGTCTCTGTCACTCAGAATTCTGGGTCAGAGAACAGAAACTTTCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS CAA 72 bp | AGGTCTTATTCTATGATACAGCCCAGCAGGTACTTCTaGTCCATTTTCCTTCAGTTCCAGGACAGCATAGTC | + |
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Preference number: 6 (lower is better) Translates to: RSYSMIQPSRYF*SIFLQFQDSIV Trigger: GACTATGCTGTCCTGGAACTGAAGGAAAATGGACAAGAAGTACCTGCTGGGCTGTATCATAGAATAAGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS CAA 90 bp | TTCCACCATAGGAACCCAACTGAGTCACTGACCCTCGAAAGATGTTaGACCACTTTAACAGGAGTAGAATTTCTTGTCATTTTCCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: FHHRNPTESLTLERC*TTLTGVEFLVIFPK Trigger: CTTTGGGAAAATGACAAGAAATTCTACTCCTGTTAAAGTGGTCAAACATCTTTCGAGGGTCAGTGACTCAGTTGGGTTCCTATGGTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS TCA 72 bp | CTTTACACACTGACTAATTATGTTTGCCCACTCACTTaGATCTATGCCTTCACCCACAATGCTAGCTATCAC | + |
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Preference number: 6 (lower is better) Translates to: LYTLTNYVCPLT*IYAFTHNASYH Trigger: GTGATAGCTAGCATTGTGGGTGAAGGCATAGATTCAAGTGAGTGGGCAAACATAATTAGTCAGTGTGTAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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| CDS TCA 72 bp | TCTATGCCTTCACCCACAATGCTAGCTATCACATGCTaGCAAGTCAAAATGTACAACTCTTTAAAAACAAAG | + |
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Preference number: 6 (lower is better) Translates to: SMPSPTMLAITC*QVKMYNSLKTK Trigger: CTTTGTTTTTAAAGAGTTGTACATTTTGACTTGTCAGCATGTGATAGCTAGCATTGTGGGTGAAGGCATAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025595.5 ENSMUST00000144662.8 ENSMUST00000151307.8 |
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