Pregenerated sensors for FAM110A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027459Ensembl transcript IDs: ENSMUST00000062047.6, ENSMUST00000109863.2, ENSMUST00000109864.8, ENSMUST00000109865.8
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAGAAGGAAATAGGGCCTGGGGCAGACAGACTTGGCAAAGCACTTaGTCCCCAACTCAGTGGAGGGTACGCGACCCAAATCCAGTGTCA | + |
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Preference number: 1 (lower is better) Translates to: EEGNRAWGRQTWQST*SPTQWRVRDPNPVS Trigger: TGACACTGGATTTGGGTCGCGTACCCTCCACTGAGTTGGGGATCAAGTGCTTTGCCAAGTCTGTCTGCCCCAGGCCCTATTTCCTTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTGGGGTAGGCCAAGGGCAACAGCAAACTTCTGTGGGTCAGTCCTTGCTTGCTCACCCAAGAGTCTCTaGGTCTGCAGGAAGGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: GWGRPRATANFCGSVLACSPKSL*VCRKAA Trigger: GGCTGCCTTCCTGCAGACCCAGAGACTCTTGGGTGA...GCAAGCAAGGACTGACCCACAGAAGTTTGCTGTTGCCCTTGGCCTACCCCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR-3UTR TCA 90 bp | TTATTAGCCACAGAGACTTCAGAGCACCAGGCTCCTAACCAGTCCCTCCTACAAACCTCCTCCCCGGGGTaGGTTCCCAGGAAGCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LLATETSEHQAPNQSLLQTSSPG*VPRKQG Trigger: CCCTTGCTTCCTGGGAACTCACCCCGGGGAGGAGGT...TTGTAGGAGGGACTGGTTAGGAGCCTGGTGCTCTGAAGTCTCTGTGGCTAATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAACAGCAAACTTCTGTGGGTCAGTCCTTGCTTGCCAGAGGATGCTGGTCTCACCCAAGAGTCTCTaGGTCTGCAGGAAGGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: RATANFCGSVLACQRMLVSPKSL*VCRKAA Trigger: GGCTGCCTTCCTGCAGACCCAGAGACTCTTGGGTGA...GACCAGCATCCTCTGGCAAGCAAGGACTGACCCACAGAAGTTTGCTGTTGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTTAGGGGGTGGGGTAGGCCAAGGGCAACAGCAAACTTCTGTGGGTCAGTCCAAGAGTCTCTGGGTCTaGAGGAAGGCAGCCAATGGA | + |
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Preference number: 2 (lower is better) Translates to: LLGGGVGQGQQQTSVGQSKSLWV*RKAANG Trigger: TCCATTGGCTGCCTTCCTGCAGACCCAGAGACTCTT...GGACTGACCCACAGAAGTTTGCTGTTGCCCTTGGCCTACCCCACCCCCTAACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR CAA 90 bp | GTGTCACCGGAGGAAACAGGCAGAAGCACACTTGTGTCGCAAACTTaGTTAGGGGGTGGGGTAGGCCAAGGGCAACAGCAAACTTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: VSPEETGRSTLVSQT*LGGGVGQGQQQTSV Trigger: CACAGAAGTTTGCTGTTGCCCTTGGCCTACCCCACCCCCTAACAAAGTTTGCGACACAAGTGTGCTTCTGCCTGTTTCCTCCGGTGACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAAGGGCAACAGCAAACTTCTGTGGGTCAGTCCTTGCTTGCCAGAGGATGCTAAGAGTCTCTGGGTCTaGAGGAAGGCAGCCAATGGA | + |
|
Preference number: 2 (lower is better) Translates to: AKGNSKLLWVSPCLPEDAKSLWV*RKAANG Trigger: TCCATTGGCTGCCTTCCTGCAGACCCAGAGACTCTT...AGCATCCTCTGGCAAGCAAGGACTGACCCACAGAAGTTTGCTGTTGCCCTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTTAGGGGGTGGGGTAGGCCAAGGGCAACAGCAAACTTCTGTGGGTCAGTCCTTGCTTGCCAGAGGATaGTGGTCTAAGTCTTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: LLGGGVGQGQQQTSVGQSLLARG*WSKSWP Trigger: AGGCCAAGACTTAGACCAGCATCCTCTGGCAAGCAA...GGACTGACCCACAGAAGTTTGCTGTTGCCCTTGGCCTACCCCACCCCCTAACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGGGCAGACAGACTTGGCAAAGCACTTGATCCCCAACTCAGTGGAGGGTACGTTGCTTGCCAGAGGATaGTGGTCTAAGTCTTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: LGQTDLAKHLIPNSVEGTLLARG*WSKSWP Trigger: AGGCCAAGACTTAGACCAGCATCCTCTGGCAAGCAA...CGTACCCTCCACTGAGTTGGGGATCAAGTGCTTTGCCAAGTCTGTCTGCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR-3UTR CCA 90 bp | ACTTTGTTAGGGGGTGGGGTAGGCCAAGGGCAACAGCAAACTTCTGTGGGTCAGCTTGCCAGAGGATGCTaGTCTAAGTCTTGGCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: TLLGGGVGQGQQQTSVGQLARGC*SKSWPL Trigger: TAGAGGCCAAGACTTAGACCAGCATCCTCTGGCAAG...CTGACCCACAGAAGTTTGCTGTTGCCCTTGGCCTACCCCACCCCCTAACAAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGTAGGCCAAGGGCAACAGCAAACTTCTGTGGGTCAGTCCTTGCTTGCCAGACAGGAAAGGACAAAGTaGCAACTGTCTCTTCACGAT | + |
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Preference number: 2 (lower is better) Translates to: GVGQGQQQTSVGQSLLARQERTK*QLSLHD Trigger: ATCGTGAAGAGACAGTTGGCACTTTGTCCTTTCCTG...TCTGGCAAGCAAGGACTGACCCACAGAAGTTTGCTGTTGCCCTTGGCCTACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGAAGTCAGCAAAAGAGGACAGACAGGGAAGAAGGAAATAGGGCCTGGGGCACTTGCCAGAGGATGCTaGTCTAAGTCTTGGCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: EEVSKRGQTGKKEIGPGALARGC*SKSWPL Trigger: TAGAGGCCAAGACTTAGACCAGCATCCTCTGGCAAG...TGCCCCAGGCCCTATTTCCTTCTTCCCTGTCTGTCCTCTTTTGCTGACTTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAAGGGCAACAGCAAACTTCTGTGGGTCAGTCCTTGCTTGCCAGAGGATGCTCAGGAAAGGACAAAGTaGCAACTGTCTCTTCACGAT | + |
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Preference number: 2 (lower is better) Translates to: AKGNSKLLWVSPCLPEDAQERTK*QLSLHD Trigger: ATCGTGAAGAGACAGTTGGCACTTTGTCCTTTCCTG...AGCATCCTCTGGCAAGCAAGGACTGACCCACAGAAGTTTGCTGTTGCCCTTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR-3UTR CCA 90 bp | GTCACCGGAGGAAACAGGCAGAAGCACACTTGTGTCGCAAACTTTGTTAGGGGGCAGGAAGGCAGCCAATaGATACAGGAAAGGACAAAG | + |
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Preference number: 2 (lower is better) Translates to: VTGGNRQKHTCVANFVRGQEGSQ*IQERTK Trigger: CTTTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTG...CCCCCTAACAAAGTTTGCGACACAAGTGTGCTTCTGCCTGTTTCCTCCGGTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR-3UTR GCA 90 bp | GACCCAAATCCAGTGTCACCGGAGGAAACAGGCAGAAGCACACTTGTGTCGCAACAGGAAAGGACAAAGTaGCAACTGTCTCTTCACGAT | + |
|
Preference number: 2 (lower is better) Translates to: DPNPVSPEETGRSTLVSQQERTK*QLSLHD Trigger: ATCGTGAAGAGACAGTTGGCACTTTGTCCTTTCCTG...TTGCGACACAAGTGTGCTTCTGCCTGTTTCCTCCGGTGACACTGGATTTGGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR-3UTR CCA 90 bp | CAACAGCAAACTTCTGTGGGTCAGTCCTTGCTTGCCAGAGGATGCTGGTCTAAGCAGGAAGGCAGCCAATaGATACAGGAAAGGACAAAG | + |
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Preference number: 2 (lower is better) Translates to: QQQTSVGQSLLARGCWSKQEGSQ*IQERTK Trigger: CTTTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTG...CTTAGACCAGCATCCTCTGGCAAGCAAGGACTGACCCACAGAAGTTTGCTGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGTCACCGGAGGAAACAGGCAGAAGCACACTTGTGTCGCAAACTTTGTTACAGGAAGGCAGCCAATaGATACAGGAAAGGACAAAG | + |
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Preference number: 2 (lower is better) Translates to: PVSPEETGRSTLVSQTLLQEGSQ*IQERTK Trigger: CTTTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTG...TAACAAAGTTTGCGACACAAGTGTGCTTCTGCCTGTTTCCTCCGGTGACACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAACGAACATTTGTGTTTATTAGCCACAGAGACTTCAGAGCACCAGGCTCCTACTTGGCAAAGCACTTaGTCCCCAACTCAGTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: ENEHLCLLATETSEHQAPTWQST*SPTQWR Trigger: CCTCCACTGAGTTGGGGATCAAGTGCTTTGCCAAGT...AGGAGCCTGGTGCTCTGAAGTCTCTGTGGCTAATAAACACAAATGTTCGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR-3UTR CAA 90 bp | GCGACCCAAATCCAGTGTCACCGGAGGAAACAGGCAGAAGCACACTTGTGTCGCTCTGTGGGTCAGTCCTaGCTTGCCAGAGGATGCTGG | + |
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Preference number: 3 (lower is better) Translates to: ATQIQCHRRKQAEAHLCRSVGQS*LARGCW Trigger: CCAGCATCCTCTGGCAAGCAAGGACTGACCCACAGA...GCGACACAAGTGTGCTTCTGCCTGTTTCCTCCGGTGACACTGGATTTGGGTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR GCA 72 bp | GCCAAGGGCAACAGCAAACTTCTGTGGGTCAGTCCTTaGTTGCCAGAGGATGCTGGTCTAAGTCTTGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: AKGNSKLLWVSP*LPEDAGLSLGL Trigger: GAGGCCAAGACTTAGACCAGCATCCTCTGGCAAGCAAGGACTGACCCACAGAAGTTTGCTGTTGCCCTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR CCA 72 bp | ACCCAAGAGTCTCTGGGTCTGCAGGAAGGCAGCCAATaGATACAGGAAAGGACAAAGTGCCAACTGTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: TQESLGLQEGSQ*IQERTKCQLSL Trigger: AAGAGACAGTTGGCACTTTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACTCTTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR CCA 72 bp | GTCTTGGCCTCTACATTAAATTCACCCAAGAGTCTCTaGGTCTGCAGGAAGGCAGCCAATGGATACAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: VLASTLNSPKSL*VCRKAANGYRK Trigger: TTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACTCTTGGGTGAATTTAATGTAGAGGCCAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CCA 90 bp | CTGGGGCAGACAGACTTGGCAAAGCACTTGATCCCCAACTCAGTGGAGGGTACGAAGGTAGGGCGGGAGTaGCGGGGGCTCCGGGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LGQTDLAKHLIPNSVEGTKVGRE*RGLRGS Trigger: TGAGCCCCGGAGCCCCCGCCACTCCCGCCCTACCTT...CGTACCCTCCACTGAGTTGGGGATCAAGTGCTTTGCCAAGTCTGTCTGCCCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CCA 90 bp | GGGGTAGGCCAAGGGCAACAGCAAACTTCTGTGGGTCAGTCCTTGCTTGCCAGAAAGGTAGGGCGGGAGTaGCGGGGGCTCCGGGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: GVGQGQQQTSVGQSLLARKVGRE*RGLRGS Trigger: TGAGCCCCGGAGCCCCCGCCACTCCCGCCCTACCTT...TCTGGCAAGCAAGGACTGACCCACAGAAGTTTGCTGTTGCCCTTGGCCTACCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CCA 90 bp | GCGACCCAAATCCAGTGTCACCGGAGGAAACAGGCAGAAGCACACTTGTGTCGCAAGGTAGGGCGGGAGTaGCGGGGGCTCCGGGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: ATQIQCHRRKQAEAHLCRKVGRE*RGLRGS Trigger: TGAGCCCCGGAGCCCCCGCCACTCCCGCCCTACCTT...GCGACACAAGTGTGCTTCTGCCTGTTTCCTCCGGTGACACTGGATTTGGGTCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR TCA 90 bp | GGGTGGGGTAGGCCAAGGGCAACAGCAAACTTCTGTGGGTCAGTCCTTGCTTGCAGCAGAGCTGCGGCGTaGGCAGCCCCCTTCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: GWGRPRATANFCGSVLACSRAAA*AAPFRA Trigger: AGCTCTGAAGGGGGCTGCTCACGCCGCAGCTCTGCT...GCAAGCAAGGACTGACCCACAGAAGTTTGCTGTTGCCCTTGGCCTACCCCACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CCA 90 bp | GCCAAGGGCAACAGCAAACTTCTGTGGGTCAGTCCTTGCTTGCCAGAGGATGCTGGCTGCACCGGCTCTTaGCGGGTGTTGGCCACACGC | + |
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Preference number: 4 (lower is better) Translates to: AKGNSKLLWVSPCLPEDAGCTGS*RVLATR Trigger: GCGTGTGGCCAACACCCGCCAAGAGCCGGTGCAGCC...AGCATCCTCTGGCAAGCAAGGACTGACCCACAGAAGTTTGCTGTTGCCCTTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CCA 90 bp | CCATCCTCTCAACCTCCTCCCCGGGGTGAGTTCCCAGGAAGCAAGGGCCCTCTGGATCGGCTGCTGCCCTaGAAAAGCGCTCACTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: PSSQPPPRGEFPGSKGPLDRLLP*KSAHSS Trigger: ACTTGAGTGAGCGCTTTTCCAGGGCAGCAGCCGATC...CAGAGGGCCCTTGCTTCCTGGGAACTCACCCCGGGGAGGAGGTTGAGAGGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CCA 90 bp | AGAGTCTCTGGGTCTGCAGGAAGGCAGCCAATGGATACAGGAAAGGACAAAGTGAAGGTAGGGCGGGAGTaGCGGGGGCTCCGGGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RVSGSAGRQPMDTGKDKVKVGRE*RGLRGS Trigger: TGAGCCCCGGAGCCCCCGCCACTCCCGCCCTACCTT...CACTTTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CCA 90 bp | ACTTTGTTAGGGGGTGGGGTAGGCCAAGGGCAACAGCAAACTTCTGTGGGTCAGACTGGGTGTGAGCACTaGGCCGCGAGGACCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: TLLGGGVGQGQQQTSVGQTGCEH*AARTRA Trigger: AGCCCTGGTCCTCGCGGCCCAGTGCTCACACCCAGT...CTGACCCACAGAAGTTTGCTGTTGCCCTTGGCCTACCCCACCCCCTAACAAAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CCA 90 bp | ATAGGGCCTGGGGCAGACAGACTTGGCAAAGCACTTGATCCCCAACTCAGTGGAACTGGGTGTGAGCACTaGGCCGCGAGGACCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: IGPGADRLGKALDPQLSGTGCEH*AARTRA Trigger: AGCCCTGGTCCTCGCGGCCCAGTGCTCACACCCAGT...TCCACTGAGTTGGGGATCAAGTGCTTTGCCAAGTCTGTCTGCCCCAGGCCCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CCA 90 bp | GGGCCTGGGGCAGACAGACTTGGCAAAGCACTTGATCCCCAACTCAGTGGAGGGGCTGGTGGGACCTTGTaGGCAGATCCTTCTGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GPGADRLGKALDPQLSGGAGGTL*ADPSGL Trigger: AAGGCCAGAAGGATCTGCCCACAAGGTCCCACCAGC...CCCTCCACTGAGTTGGGGATCAAGTGCTTTGCCAAGTCTGTCTGCCCCAGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CCA 90 bp | CTGGGGCAGACAGACTTGGCAAAGCACTTGATCCCCAACTCAGTGGAGGGTACGCACTCAAGTCCGACTTaGACCGCTGCAGGCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: LGQTDLAKHLIPNSVEGTHSSPT*TAAGQG Trigger: CCCCTGGCCTGCAGCGGTCCAAGTCGGACTTGAGTG...CGTACCCTCCACTGAGTTGGGGATCAAGTGCTTTGCCAAGTCTGTCTGCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR TCA 90 bp | CCTGGGGCAGACAGACTTGGCAAAGCACTTGATCCCCAACTCAGTGGAGGGTACATAGGGCCGAGCAGGTaGAGCAGGCAAGGGACGAAC | + |
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Preference number: 4 (lower is better) Translates to: PGADRLGKALDPQLSGGYIGPSR*SRQGTN Trigger: GTTCGTCCCTTGCCTGCTTCACCTGCTCGGCCCTAT...GTACCCTCCACTGAGTTGGGGATCAAGTGCTTTGCCAAGTCTGTCTGCCCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR TCA 90 bp | GCGACCCAAATCCAGTGTCACCGGAGGAAACAGGCAGAAGCACACTTGTGTCGCATAGGGCCGAGCAGGTaGAGCAGGCAAGGGACGAAC | + |
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Preference number: 4 (lower is better) Translates to: ATQIQCHRRKQAEAHLCRIGPSR*SRQGTN Trigger: GTTCGTCCCTTGCCTGCTTCACCTGCTCGGCCCTAT...GCGACACAAGTGTGCTTCTGCCTGTTTCCTCCGGTGACACTGGATTTGGGTCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR TCA 90 bp | ACCCAAGAGTCTCTGGGTCTGCAGGAAGGCAGCCAATGGATACAGGAAAGGACAAGCAGAGCTGCGGCGTaGGCAGCCCCCTTCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: TQESLGLQEGSQWIQERTSRAAA*AAPFRA Trigger: AGCTCTGAAGGGGGCTGCTCACGCCGCAGCTCTGCT...TGTCCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACTCTTGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR GCA 90 bp | CTGGGGCAGACAGACTTGGCAAAGCACTTGATCCCCAACTCAGTGGAGGGTACGAGCCCCCTTCAGAGCTaGAAGGTCCAGCACTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LGQTDLAKHLIPNSVEGTSPLQS*KVQHLA Trigger: GGCCAAGTGCTGGACCTTGCAGCTCTGAAGGGGGCT...CGTACCCTCCACTGAGTTGGGGATCAAGTGCTTTGCCAAGTCTGTCTGCCCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CCA 90 bp | ACTTTGTTAGGGGGTGGGGTAGGCCAAGGGCAACAGCAAACTTCTGTGGGTCAGCACTCAAGTCCGACTTaGACCGCTGCAGGCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: TLLGGGVGQGQQQTSVGQHSSPT*TAAGQG Trigger: CCCCTGGCCTGCAGCGGTCCAAGTCGGACTTGAGTG...CTGACCCACAGAAGTTTGCTGTTGCCCTTGGCCTACCCCACCCCCTAACAAAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR GCA 90 bp | ACTTTGTTAGGGGGTGGGGTAGGCCAAGGGCAACAGCAAACTTCTGTGGGTCAGAGCCCCCTTCAGAGCTaGAAGGTCCAGCACTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: TLLGGGVGQGQQQTSVGQSPLQS*KVQHLA Trigger: GGCCAAGTGCTGGACCTTGCAGCTCTGAAGGGGGCT...CTGACCCACAGAAGTTTGCTGTTGCCCTTGGCCTACCCCACCCCCTAACAAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CCA 90 bp | CCAAGAGTCTCTGGGTCTGCAGGAAGGCAGCCAATGGATACAGGAAAGGACAAAACTGGGTGTGAGCACTaGGCCGCGAGGACCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: PRVSGSAGRQPMDTGKDKTGCEH*AARTRA Trigger: AGCCCTGGTCCTCGCGGCCCAGTGCTCACACCCAGT...TTTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACTCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CCA 90 bp | AACTTTGTTAGGGGGTGGGGTAGGCCAAGGGCAACAGCAAACTTCTGTGGGTCACACTCAAGTCCGACTTaGACCGCTGCAGGCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NFVRGWGRPRATANFCGSHSSPT*TAAGQG Trigger: CCCCTGGCCTGCAGCGGTCCAAGTCGGACTTGAGTG...TGACCCACAGAAGTTTGCTGTTGCCCTTGGCCTACCCCACCCCCTAACAAAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCTCTGGGTCTGCAGGAAGGCAGCCAATGGATACAGGAAAGGACAAAGTGCATAGGGCCGAGCAGGTaGAGCAGGCAAGGGACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ESLGLQEGSQWIQERTKCIGPSR*SRQGTN Trigger: GTTCGTCCCTTGCCTGCTTCACCTGCTCGGCCCTAT...GCACTTTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR TCA 90 bp | AACAGCAAACTTCTGTGGGTCAGTCCTTGCTTGCCAGAGGATGCTGGTCTAAGTAGCAGAGCTGCGGCGTaGGCAGCCCCCTTCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NSKLLWVSPCLPEDAGLSSRAAA*AAPFRA Trigger: AGCTCTGAAGGGGGCTGCTCACGCCGCAGCTCTGCT...ACTTAGACCAGCATCCTCTGGCAAGCAAGGACTGACCCACAGAAGTTTGCTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR GCA 90 bp | TTCACCCAAGAGTCTCTGGGTCTGCAGGAAGGCAGCCAATGGATACAGGAAAGGGCGCTCAAGATCGGCTaGTGCCCTGGAAAAGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FTQESLGLQEGSQWIQERALKIG*CPGKAL Trigger: GAGCGCTTTTCCAGGGCAGCAGCCGATCTTGAGCGC...CCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACTCTTGGGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR GCA 90 bp | GAGGAAGTCAGCAAAAGAGGACAGACAGGGAAGAAGGAAATAGGGCCTGGGGCAGCGCTCAAGATCGGCTaGTGCCCTGGAAAAGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EEVSKRGQTGKKEIGPGAALKIG*CPGKAL Trigger: GAGCGCTTTTCCAGGGCAGCAGCCGATCTTGAGCGC...TGCCCCAGGCCCTATTTCCTTCTTCCCTGTCTGTCCTCTTTTGCTGACTTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR CCA 90 bp | TTAAATTCACCCAAGAGTCTCTGGGTCTGCAGGAAGGCAGCCAATGGATACAGGACTGGGTGTGAGCACTaGGCCGCGAGGACCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LNSPKSLWVCRKAANGYRTGCEH*AARTRA Trigger: AGCCCTGGTCCTCGCGGCCCAGTGCTCACACCCAGT...CCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACTCTTGGGTGAATTTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR CCA 90 bp | GCCAAGGGCAACAGCAAACTTCTGTGGGTCAGTCCTTGCTTGCCAGAGGATGCTTTCCAGGTGTTCGGCTaGCCTCAGATGGGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: AKGNSKLLWVSPCLPEDAFQVFG*PQMGTQ Trigger: CTGTGTCCCCATCTGAGGCCAGCCGAACACCTGGAA...AGCATCCTCTGGCAAGCAAGGACTGACCCACAGAAGTTTGCTGTTGCCCTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTAGGGGGTGGGGTAGGCCAAGGGCAACAGCAAACTTCTGTGGGTCAGTCCGATCGGCTGCTGCCCTaGAAAAGCGCTCACTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLGGGVGQGQQQTSVGQSDRLLP*KSAHSS Trigger: ACTTGAGTGAGCGCTTTTCCAGGGCAGCAGCCGATC...GGACTGACCCACAGAAGTTTGCTGTTGCCCTTGGCCTACCCCACCCCCTAACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCAACAGCAAACTTCTGTGGGTCAGTCCTTGCTTGCCAGAGGATGCTGGTCTCCTCGCGCTTCCTCTaGGTCCAGGCCACAGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RATANFCGSVLACQRMLVSSRFL*VQATEV Trigger: AACTTCTGTGGCCTGGACCCAGAGGAAGCGCGAGGA...GACCAGCATCCTCTGGCAAGCAAGGACTGACCCACAGAAGTTTGCTGTTGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR TCA 90 bp | AACAGCAAACTTCTGTGGGTCAGTCCTTGCTTGCCAGAGGATGCTGGTCTAAGTGGTAGTGGTGCCAGGTaGTGGATAGGGCCGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSKLLWVSPCLPEDAGLSGSGAR*WIGPSR Trigger: CCTGCTCGGCCCTATCCATCACCTGGCACCACTACC...ACTTAGACCAGCATCCTCTGGCAAGCAAGGACTGACCCACAGAAGTTTGCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR CCA 90 bp | CCCAAGAGTCTCTGGGTCTGCAGGAAGGCAGCCAATGGATACAGGAAAGGACAAGCTGGTGGGACCTTGTaGGCAGATCCTTCTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PKSLWVCRKAANGYRKGQAGGTL*ADPSGL Trigger: AAGGCCAGAAGGATCTGCCCACAAGGTCCCACCAGC...TTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACTCTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGTCTCTGGGTCTGCAGGAAGGCAGCCAATGGATACAGGAAAGGACAAAGTCACTCAAGTCCGACTTaGACCGCTGCAGGCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSLWVCRKAANGYRKGQSHSSPT*TAAGQG Trigger: CCCCTGGCCTGCAGCGGTCCAAGTCGGACTTGAGTG...ACTTTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR CCA 90 bp | AACTTTGTTAGGGGGTGGGGTAGGCCAAGGGCAACAGCAAACTTCTGTGGGTCATCCTCGCGCTTCCTCTaGGTCCAGGCCACAGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NFVRGWGRPRATANFCGSSSRFL*VQATEV Trigger: AACTTCTGTGGCCTGGACCCAGAGGAAGCGCGAGGA...TGACCCACAGAAGTTTGCTGTTGCCCTTGGCCTACCCCACCCCCTAACAAAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| 3UTR CAA 72 bp | GGCCAAGGGCAACAGCAAACTTCTGTGGGTCAGTCCTaGCTTGCCAGAGGATGCTGGTCTAAGTCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQGQQQTSVGQS*LARGCWSKSWP Trigger: AGGCCAAGACTTAGACCAGCATCCTCTGGCAAGCAAGGACTGACCCACAGAAGTTTGCTGTTGCCCTTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR TCA 90 bp | AATTCACCCAAGAGTCTCTGGGTCTGCAGGAAGGCAGCCAATGGATACAGGAAAATAGGGCCGAGCAGGTaGAGCAGGCAAGGGACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NSPKSLWVCRKAANGYRKIGPSR*SRQGTN Trigger: GTTCGTCCCTTGCCTGCTTCACCTGCTCGGCCCTAT...TTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACTCTTGGGTGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGTCTCTGGGTCTGCAGGAAGGCAGCCAATGGATACAGGAAAGGACAAAGTGCGCTCAAGATCGGCTaGTGCCCTGGAAAAGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSLWVCRKAANGYRKGQSALKIG*CPGKAL Trigger: GAGCGCTTTTCCAGGGCAGCAGCCGATCTTGAGCGC...ACTTTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTCTCTGGGTCTGCAGGAAGGCAGCCAATGGATACAGGAAAGGACAAAGTGTTCCAGGTGTTCGGCTaGCCTCAGATGGGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: RVSGSAGRQPMDTGKDKVFQVFG*PQMGTQ Trigger: CTGTGTCCCCATCTGAGGCCAGCCGAACACCTGGAA...CACTTTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGAGTCTCTGGGTCTGCAGGAAGGCAGCCAATGGATACAGGAAAGGACAAAGCTGGTGGGACCTTGTaGGCAGATCCTTCTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PRVSGSAGRQPMDTGKDKAGGTL*ADPSGL Trigger: AAGGCCAGAAGGATCTGCCCACAAGGTCCCACCAGC...TTTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACTCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR CCA 90 bp | TCGCAAACTTTGTTAGGGGGTGGGGTAGGCCAAGGGCAACAGCAAACTTCTGTGGATCGGCTGCTGCCCTaGAAAAGCGCTCACTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SQTLLGGGVGQGQQQTSVDRLLP*KSAHSS Trigger: ACTTGAGTGAGCGCTTTTCCAGGGCAGCAGCCGATC...CACAGAAGTTTGCTGTTGCCCTTGGCCTACCCCACCCCCTAACAAAGTTTGCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CCA 90 bp | CCAAGAGTCTCTGGGTCTGCAGGAAGGCAGCCAATGGATACAGGAAAGGACAAATCCTCGCGCTTCCTCTaGGTCCAGGCCACAGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PRVSGSAGRQPMDTGKDKSSRFL*VQATEV Trigger: AACTTCTGTGGCCTGGACCCAGAGGAAGCGCGAGGA...TTTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACTCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR CAA 72 bp | GAGGAAACAGGCAGAAGCACACTTGTGTCGCAAACTTaGTTAGGGGGTGGGGTAGGCCAAGGGCAACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EETGRSTLVSQT*LGGGVGQGQQQ Trigger: TTGCTGTTGCCCTTGGCCTACCCCACCCCCTAACAAAGTTTGCGACACAAGTGTGCTTCTGCCTGTTTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CCA 90 bp | AAGAGTCTCTGGGTCTGCAGGAAGGCAGCCAATGGATACAGGAAAGGACAAAGTTTCCAGGTGTTCGGCTaGCCTCAGATGGGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: KSLWVCRKAANGYRKGQSFQVFG*PQMGTQ Trigger: CTGTGTCCCCATCTGAGGCCAGCCGAACACCTGGAA...ACTTTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CCA 90 bp | TTAAATTCACCCAAGAGTCTCTGGGTCTGCAGGAAGGCAGCCAATGGATACAGGTTCCAGGTGTTCGGCTaGCCTCAGATGGGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: LNSPKSLWVCRKAANGYRFQVFG*PQMGTQ Trigger: CTGTGTCCCCATCTGAGGCCAGCCGAACACCTGGAA...CCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACTCTTGGGTGAATTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CCA 90 bp | AAGAGTCTCTGGGTCTGCAGGAAGGCAGCCAATGGATACAGGAAAGGACAAAGTTCCTCGCGCTTCCTCTaGGTCCAGGCCACAGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KSLWVCRKAANGYRKGQSSSRFL*VQATEV Trigger: AACTTCTGTGGCCTGGACCCAGAGGAAGCGCGAGGA...ACTTTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| 3UTR CAA 72 bp | AAGGGCAACAGCAAACTTCTGTGGGTCAGTCCTTGCTaGCCAGAGGATGCTGGTCTAAGTCTTGGCCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: KGNSKLLWVSPC*PEDAGLSLGLY Trigger: GTAGAGGCCAAGACTTAGACCAGCATCCTCTGGCAAGCAAGGACTGACCCACAGAAGTTTGCTGTTGCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CCA 90 bp | AAGAGTCTCTGGGTCTGCAGGAAGGCAGCCAATGGATACAGGAAAGGACAAAGTGATCGGCTGCTGCCCTaGAAAAGCGCTCACTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KSLWVCRKAANGYRKGQSDRLLP*KSAHSS Trigger: ACTTGAGTGAGCGCTTTTCCAGGGCAGCAGCCGATC...ACTTTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS GCA 90 bp | CCGCGAGGACCAGGGCTGAAGAGGGGCTGTCTGACCAGCGGGGGCTaGACCGGCTCTTGGCGGGTGTTGGCCACACGCAGGCTCTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: PRGPGLKRGCLTSGG*TGSWRVLATRRLLT Trigger: CGTCAAGAGCCTGCGTGTGGCCAACACCCGCCAAGAGCCGGTGCAGCCCCCGCTGGTCAGACAGCCCCTCTTCAGCCCTGGTCCTCGCGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CCA 90 bp | AGGCAAGGGACGAACGTCCACTCGGCGCACCGCGACAGTACTGGGTaGCGGACGAGGAGGGGTGGCTGGTGGGACCTTGTGGGCAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: RQGTNVHSAHRDSTG*RTRRGGWWDLVGRS Trigger: GGATCTGCCCACAAGGTCCCACCAGCCACCCCTCCTCGTCCGCCACCCAGTACTGTCGCGGTGCGCCGAGTGGACGTTCGTCCCTTGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CCA 90 bp | GCGCACCGCGACAGTACTGGGTGGCGGACGAGGAGGGGTGGCTGGTaGGACCTTGTGGGCAGATCCTTCTGGCCTTCCAGGTGTTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AHRDSTGWRTRRGGW*DLVGRSFWPSRCSA Trigger: AGCCGAACACCTGGAAGGCCAGAAGGATCTGCCCACAAGGTCCCACCAGCCACCCCTCCTCGTCCGCCACCCAGTACTGTCGCGGTGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CCA 90 bp | TCGGCGCACCGCGACAGTACTGGGTGGCGGACGAGGAGGGGTGGCTaGTGGGACCTTGTGGGCAGATCCTTCTGGCCTTCCAGGTGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SAHRDSTGWRTRRGG*WDLVGRSFWPSRCS Trigger: CGAACACCTGGAAGGCCAGAAGGATCTGCCCACAAGGTCCCACCAGCCACCCCTCCTCGTCCGCCACCCAGTACTGTCGCGGTGCGCCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS TCA 90 bp | GACACGATCCAGGGACCGCTCTTCCACTGTAGCAGAGCTGCGGCGTaGGCAGCCCCCTTCAGAGCTGCAAGGTCCAGCACTTGGCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: DTIQGPLFHCSRAAA*AAPFRAARSSTWPG Trigger: GCCGGGCCAAGTGCTGGACCTTGCAGCTCTGAAGGGGGCTGCTCACGCCGCAGCTCTGCTACAGTGGAAGAGCGGTCCCTGGATCGTGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CCA 90 bp | CTTGGCCCGGCTAGAGACACGATGTCCGAGCTGGCCCTTGCTAAGTaGGCCACCCCCAATCCTCGCGCTTCCTCTGGGTCCAGGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LGPARDTMSELALAK*ATPNPRASSGSRPQ Trigger: CTGTGGCCTGGACCCAGAGGAAGCGCGAGGATTGGGGGTGGCCCACTTAGCAAGGGCCAGCTCGGACATCGTGTCTCTAGCCGGGCCAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS CCA 90 bp | CGGACGAGGAGGGGTGGCTGGTGGGACCTTGTGGGCAGATCCTTCTaGCCTTCCAGGTGTTCGGCTGGCCTCAGATGGGGACACAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: RTRRGGWWDLVGRSF*PSRCSAGLRWGHRT Trigger: AGTCCTGTGTCCCCATCTGAGGCCAGCCGAACACCTGGAAGGCCAGAAGGATCTGCCCACAAGGTCCCACCAGCCACCCCTCCTCGTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR CAA 90 bp | GGGCCTGGGGCAGACAGACTTGGCAAAGCACTTGATCCCCAACTCAGTGGAGGGGGCTCTTGGCGGGTGTaGGCCACACGCAGGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GPGADRLGKALDPQLSGGGSWRV*ATRRLL Trigger: CAAGAGCCTGCGTGTGGCCAACACCCGCCAAGAGCC...CCCTCCACTGAGTTGGGGATCAAGTGCTTTGCCAAGTCTGTCTGCCCCAGGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR CAA 90 bp | GGGCAACAGCAAACTTCTGTGGGTCAGTCCTTGCTTGCCAGAGGATGCTGGTCTGGGCTGCACCGGCTCTaGGCGGGTGTTGGCCACACG | + |
|
Preference number: 5 (lower is better) Translates to: GQQQTSVGQSLLARGCWSGLHRL*AGVGHT Trigger: CGTGTGGCCAACACCCGCCAAGAGCCGGTGCAGCCC...AGACCAGCATCCTCTGGCAAGCAAGGACTGACCCACAGAAGTTTGCTGTTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS CCA 90 bp | CTATCACACAAGTTGATGAGGCTGCTAAGGATGTCGAGGTCCAGTTaGGGCCGGCGGCCAGAACAGGGCAGGACTCGGCGACTGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSHKLMRLLRMSRSS*GRRPEQGRTRRLGV Trigger: CACACCCAGTCGCCGAGTCCTGCCCTGTTCTGGCCGCCGGCCCCAACTGGACCTCGACATCCTTAGCAGCCTCATCAACTTGTGTGATAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR CAA 90 bp | GGGTGGGGTAGGCCAAGGGCAACAGCAAACTTCTGTGGGTCAGTCCTTGCTTGCTCACTCAAGTCCGACTaGGACCGCTGCAGGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GWGRPRATANFCGSVLACSLKSD*DRCRPG Trigger: CCCTGGCCTGCAGCGGTCCAAGTCGGACTTGAGTGA...GCAAGCAAGGACTGACCCACAGAAGTTTGCTGTTGCCCTTGGCCTACCCCACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR CAA 90 bp | AGTCTCTGGGTCTGCAGGAAGGCAGCCAATGGATACAGGAAAGGACAAAGTGCCGGCTCTTGGCGGGTGTaGGCCACACGCAGGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLWVCRKAANGYRKGQSAGSWRV*ATRRLL Trigger: CAAGAGCCTGCGTGTGGCCAACACCCGCCAAGAGCC...GGCACTTTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR CAA 90 bp | TCGCAAACTTTGTTAGGGGGTGGGGTAGGCCAAGGGCAACAGCAAACTTCTGTGGGCTCTTGGCGGGTGTaGGCCACACGCAGGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SQTLLGGGVGQGQQQTSVGSWRV*ATRRLL Trigger: CAAGAGCCTGCGTGTGGCCAACACCCGCCAAGAGCC...CACAGAAGTTTGCTGTTGCCCTTGGCCTACCCCACCCCCTAACAAAGTTTGCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR CAA 90 bp | ATAGGGCCTGGGGCAGACAGACTTGGCAAAGCACTTGATCCCCAACTCAGTGGATCACTCAAGTCCGACTaGGACCGCTGCAGGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: IGPGADRLGKALDPQLSGSLKSD*DRCRPG Trigger: CCCTGGCCTGCAGCGGTCCAAGTCGGACTTGAGTGA...TCCACTGAGTTGGGGATCAAGTGCTTTGCCAAGTCTGTCTGCCCCAGGCCCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
||
| CDS-3UTR CAA 90 bp | GGGCAACAGCAAACTTCTGTGGGTCAGTCCTTGCTTGCCAGAGGATGCTGGTCTTCACTCAAGTCCGACTaGGACCGCTGCAGGCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: GQQQTSVGQSLLARGCWSSLKSD*DRCRPG Trigger: CCCTGGCCTGCAGCGGTCCAAGTCGGACTTGAGTGA...AGACCAGCATCCTCTGGCAAGCAAGGACTGACCCACAGAAGTTTGCTGTTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CAA 90 bp | GGCCTCTACATTAAATTCACCCAAGAGTCTCTGGGTCTGCAGGAAGGCAGCCAAGGCTCTTGGCGGGTGTaGGCCACACGCAGGCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: GLYIKFTQESLGLQEGSQGSWRV*ATRRLL Trigger: CAAGAGCCTGCGTGTGGCCAACACCCGCCAAGAGCC...TTGGCTGCCTTCCTGCAGACCCAGAGACTCTTGGGTGAATTTAATGTAGAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CAA 90 bp | CAACAGCAAACTTCTGTGGGTCAGTCCTTGCTTGCCAGAGGATGCTGGTCTAAGTCACTCAAGTCCGACTaGGACCGCTGCAGGCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: QQQTSVGQSLLARGCWSKSLKSD*DRCRPG Trigger: CCCTGGCCTGCAGCGGTCCAAGTCGGACTTGAGTGA...CTTAGACCAGCATCCTCTGGCAAGCAAGGACTGACCCACAGAAGTTTGCTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CAA 90 bp | GGGCAACAGCAAACTTCTGTGGGTCAGTCCTTGCTTGCCAGAGGATGCTGGTCTGGACTATCACACAAGTaGATGAGGCTGCTAAGGATG | + |
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Preference number: 5 (lower is better) Translates to: GQQQTSVGQSLLARGCWSGLSHK*MRLLRM Trigger: CATCCTTAGCAGCCTCATCAACTTGTGTGATAGTCC...AGACCAGCATCCTCTGGCAAGCAAGGACTGACCCACAGAAGTTTGCTGTTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CAA 90 bp | AGTCTCTGGGTCTGCAGGAAGGCAGCCAATGGATACAGGAAAGGACAAAGTGCCGGACTATCACACAAGTaGATGAGGCTGCTAAGGATG | + |
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Preference number: 5 (lower is better) Translates to: SLWVCRKAANGYRKGQSAGLSHK*MRLLRM Trigger: CATCCTTAGCAGCCTCATCAACTTGTGTGATAGTCC...GGCACTTTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CAA 90 bp | GAGTCTCTGGGTCTGCAGGAAGGCAGCCAATGGATACAGGAAAGGACAAAGTGCGGACTATCACACAAGTaGATGAGGCTGCTAAGGATG | + |
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Preference number: 5 (lower is better) Translates to: ESLGLQEGSQWIQERTKCGLSHK*MRLLRM Trigger: CATCCTTAGCAGCCTCATCAACTTGTGTGATAGTCC...GCACTTTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS-3UTR CAA 90 bp | GAGGAAGTCAGCAAAAGAGGACAGACAGGGAAGAAGGAAATAGGGCCTGGGGCAGGACTATCACACAAGTaGATGAGGCTGCTAAGGATG | + |
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Preference number: 5 (lower is better) Translates to: EEVSKRGQTGKKEIGPGAGLSHK*MRLLRM Trigger: CATCCTTAGCAGCCTCATCAACTTGTGTGATAGTCC...TGCCCCAGGCCCTATTTCCTTCTTCCCTGTCTGTCCTCTTTTGCTGACTTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062047.6 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS GCA 72 bp | CCAGGGCTGAAGAGGGGCTGTCTGACCAGCGGGGGCTaGACCGGCTCTTGGCGGGTGTTGGCCACACGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PGLKRGCLTSGG*TGSWRVLATRR Trigger: CCTGCGTGTGGCCAACACCCGCCAAGAGCCGGTGCAGCCCCCGCTGGTCAGACAGCCCCTCTTCAGCCCTGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CCA 72 bp | AGGGGCTGTCTGACCAGCGGGGGCTGCACCGGCTCTTaGCGGGTGTTGGCCACACGCAGGCTCTTGACGTAC | + |
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Preference number: 6 (lower is better) Translates to: RGCLTSGGCTGS*RVLATRRLLTY Trigger: GTACGTCAAGAGCCTGCGTGTGGCCAACACCCGCCAAGAGCCGGTGCAGCCCCCGCTGGTCAGACAGCCCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CAA 72 bp | GAGGGGCTGTCTGACCAGCGGGGGCTGCACCGGCTCTaGGCGGGTGTTGGCCACACGCAGGCTCTTGACGTA | + |
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Preference number: 6 (lower is better) Translates to: EGLSDQRGLHRL*AGVGHTQALDV Trigger: TACGTCAAGAGCCTGCGTGTGGCCAACACCCGCCAAGAGCCGGTGCAGCCCCCGCTGGTCAGACAGCCCCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CCA 72 bp | CGCGACAGTACTGGGTGGCGGACGAGGAGGGGTGGCTaGTGGGACCTTGTGGGCAGATCCTTCTGGCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RDSTGWRTRRGG*WDLVGRSFWPS Trigger: GGAAGGCCAGAAGGATCTGCCCACAAGGTCCCACCAGCCACCCCTCCTCGTCCGCCACCCAGTACTGTCGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CCA 72 bp | GACAGTACTGGGTGGCGGACGAGGAGGGGTGGCTGGTaGGACCTTGTGGGCAGATCCTTCTGGCCTTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: DSTGWRTRRGGW*DLVGRSFWPSR Trigger: CCTGGAAGGCCAGAAGGATCTGCCCACAAGGTCCCACCAGCCACCCCTCCTCGTCCGCCACCCAGTACTGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CAA 72 bp | GTGAGCAGCCCCCTTCAGAGCTGCAAGGTCCAGCACTaGGCCCGGCTAGAGACACGATGTCCGAGCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: VSSPLQSCKVQH*ARLETRCPSWP Trigger: GGGCCAGCTCGGACATCGTGTCTCTAGCCGGGCCAAGTGCTGGACCTTGCAGCTCTGAAGGGGGCTGCTCAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CAA 90 bp | GTCCAGCACTTGGCCCGGCTAGAGACACGATGTCCGAGCTGGCCCTaGCTAAGTGGGCCACCCCCAATCCTCGCGCTTCCTCTGGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: VQHLARLETRCPSWP*LSGPPPILALPLGP Trigger: TGGACCCAGAGGAAGCGCGAGGATTGGGGGTGGCCCACTTAGCAAGGGCCAGCTCGGACATCGTGTCTCTAGCCGGGCCAAGTGCTGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS TCA 72 bp | CAGGGACCGCTCTTCCACTGTAGCAGAGCTGCGGCGTaGGCAGCCCCCTTCAGAGCTGCAAGGTCCAGCACT | + |
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Preference number: 6 (lower is better) Translates to: QGPLFHCSRAAA*AAPFRAARSST Trigger: AGTGCTGGACCTTGCAGCTCTGAAGGGGGCTGCTCACGCCGCAGCTCTGCTACAGTGGAAGAGCGGTCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CCA 72 bp | CGTCTGCTGGCCTTGGTAGCAGGTAGCCGGGAACCTTaGTTCTCAGGCGAAAAGGTAGGGCGGGAGTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: RLLALVAGSREP*FSGEKVGREWR Trigger: CCGCCACTCCCGCCCTACCTTTTCGCCTGAGAACCAAGGTTCCCGGCTACCTGCTACCAAGGCCAGCAGACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CAA 72 bp | CAGCACTCGGTTTCCTGGCTCCCCCGTCTGCTGGCCTaGGTAGCAGGTAGCCGGGAACCTTGGTTCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: QHSVSWLPRLLA*VAGSREPWFSG Trigger: GCCTGAGAACCAAGGTTCCCGGCTACCTGCTACCAAGGCCAGCAGACGGGGGAGCCAGGAAACCGAGTGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CAA 72 bp | CAAGTTGATGAGGCTGCTAAGGATGTCGAGGTCCAGTaGGGGCCGGCGGCCAGAACAGGGCAGGACTCGGCG | + |
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Preference number: 6 (lower is better) Translates to: QVDEAAKDVEVQ*GPAARTGQDSA Trigger: CGCCGAGTCCTGCCCTGTTCTGGCCGCCGGCCCCAACTGGACCTCGACATCCTTAGCAGCCTCATCAACTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CAA 72 bp | TTGGCCCGGCTAGAGACACGATGTCCGAGCTGGCCCTaGCTAAGTGGGCCACCCCCAATCCTCGCGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LARLETRCPSWP*LSGPPPILALP Trigger: AGGAAGCGCGAGGATTGGGGGTGGCCCACTTAGCAAGGGCCAGCTCGGACATCGTGTCTCTAGCCGGGCCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CAA 90 bp | GGGGGCTGCACCGGCTCTTGGCGGGTGTTGGCCACACGCAGGCTCTaGACGTACTTAGCCTTATCAGCCTCCAGGCGTTCCACAGCACTC | + |
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Preference number: 6 (lower is better) Translates to: GGCTGSWRVLATRRL*TYLALSASRRSTAL Trigger: GAGTGCTGTGGAACGCCTGGAGGCTGATAAGGCTAAGTACGTCAAGAGCCTGCGTGTGGCCAACACCCGCCAAGAGCCGGTGCAGCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CAA 90 bp | AGCTGCGGCGTGAGCAGCCCCCTTCAGAGCTGCAAGGTCCAGCACTaGGCCCGGCTAGAGACACGATGTCCGAGCTGGCCCTTGCTAAGT | + |
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Preference number: 6 (lower is better) Translates to: SCGVSSPLQSCKVQH*ARLETRCPSWPLLS Trigger: ACTTAGCAAGGGCCAGCTCGGACATCGTGTCTCTAGCCGGGCCAAGTGCTGGACCTTGCAGCTCTGAAGGGGGCTGCTCACGCCGCAGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CCA 72 bp | AAGTTGATGAGGCTGCTAAGGATGTCGAGGTCCAGTTaGGGCCGGCGGCCAGAACAGGGCAGGACTCGGCGA | + |
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Preference number: 6 (lower is better) Translates to: KLMRLLRMSRSS*GRRPEQGRTRR Trigger: TCGCCGAGTCCTGCCCTGTTCTGGCCGCCGGCCCCAACTGGACCTCGACATCCTTAGCAGCCTCATCAACTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CAA 90 bp | GGCGTTCCACAGCACTCGGTTTCCTGGCTCCCCCGTCTGCTGGCCTaGGTAGCAGGTAGCCGGGAACCTTGGTTCTCAGGCGAAAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: GVPQHSVSWLPRLLA*VAGSREPWFSGEKV Trigger: TACCTTTTCGCCTGAGAACCAAGGTTCCCGGCTACCTGCTACCAAGGCCAGCAGACGGGGGAGCCAGGAAACCGAGTGCTGTGGAACGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CAA 72 bp | ACCGGCTCTTGGCGGGTGTTGGCCACACGCAGGCTCTaGACGTACTTAGCCTTATCAGCCTCCAGGCGTTCC | + |
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Preference number: 6 (lower is better) Translates to: TGSWRVLATRRL*TYLALSASRRS Trigger: GGAACGCCTGGAGGCTGATAAGGCTAAGTACGTCAAGAGCCTGCGTGTGGCCAACACCCGCCAAGAGCCGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CAA 90 bp | ACTATCACACAAGTTGATGAGGCTGCTAAGGATGTCGAGGTCCAGTaGGGGCCGGCGGCCAGAACAGGGCAGGACTCGGCGACTGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: TITQVDEAAKDVEVQ*GPAARTGQDSATGC Trigger: ACACCCAGTCGCCGAGTCCTGCCCTGTTCTGGCCGCCGGCCCCAACTGGACCTCGACATCCTTAGCAGCCTCATCAACTTGTGTGATAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CCA 72 bp | TGTGGGCAGATCCTTCTGGCCTTCCAGGTGTTCGGCTaGCCTCAGATGGGGACACAGGACTATCACACAAGT | + |
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Preference number: 6 (lower is better) Translates to: CGQILLAFQVFG*PQMGTQDYHTS Trigger: ACTTGTGTGATAGTCCTGTGTCCCCATCTGAGGCCAGCCGAACACCTGGAAGGCCAGAAGGATCTGCCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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| CDS CCA 72 bp | TCCTTCTGGCCTTCCAGGTGTTCGGCTGGCCTCAGATaGGGACACAGGACTATCACACAAGTTGATGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SFWPSRCSAGLR*GHRTITQVDEA Trigger: AGCCTCATCAACTTGTGTGATAGTCCTGTGTCCCCATCTGAGGCCAGCCGAACACCTGGAAGGCCAGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062047.6 ENSMUST00000109863.2 ENSMUST00000109864.8 ENSMUST00000109865.8 |
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