Pregenerated sensors for FAM107B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026655Ensembl transcript IDs: ENSMUST00000027965.11, ENSMUST00000115052.9, ENSMUST00000115053.9, ENSMUST00000115054.9, ENSMUST00000115055.9, ENSMUST00000177125.2, ENSMUST00000226435.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCCTAGGACTCCTGGGCCTGAGCCACCTCTTGGCCTGTTCTCCTaGGATTGCCTTTCACCTTCACAAACTCTGGGGCATTTTCTTGCT | + |
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Preference number: 1 (lower is better) Translates to: GPRTPGPEPPLGLFS*DCLSPSQTLGHFLA Trigger: AGCAAGAAAATGCCCCAGAGTTTGTGAAGGTGAAAGGCAATCTCAGGAGAACAGGCCAAGAGGTGGCTCAGGCCCAGGAGTCCTAGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177125.2 |
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| 3UTR GCA 90 bp | AGGCCGAGTAGTACAACCCTCTTGCGTGTTCCAGTGCCCGCTTCCTaGCTCTTTTCACTCCTTTTGTGGCTTTCTTGGTCTAAACACAGG | + |
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Preference number: 1 (lower is better) Translates to: RPSSTTLLRVPVPAS*LFSLLLWLSWSKHR Trigger: CCTGTGTTTAGACCAAGAAAGCCACAAAAGGAGTGAAAAGAGGCAGGAAGCGGGCACTGGAACACGCAAGAGGGTTGTACTACTCGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
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| 3UTR GCA 90 bp | GAATGGAAGAAAGGCCGAGTAGTACAACCCTCTTGCGTGTTCCAGTaGCCGCTTCCTGCCTCTTTTCACTCCTTTTGTGGCTTTCTTGGT | + |
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Preference number: 1 (lower is better) Translates to: EWKKGRVVQPSCVFQ*PLPASFHSFCGFLG Trigger: ACCAAGAAAGCCACAAAAGGAGTGAAAAGAGGCAGGAAGCGGGCACTGGAACACGCAAGAGGGTTGTACTACTCGGCCTTTCTTCCATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
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| 3UTR CCA 90 bp | CCAGTGCCCGCTTCCTGCCTCTTTTCACTCCTTTTGTGGCTTTCTTaGTCTAAACACAGGTCCATGGTATCTTGTGTGCTGGTCGATGTC | + |
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Preference number: 1 (lower is better) Translates to: PVPASCLFSLLLWLS*SKHRSMVSCVLVDV Trigger: GACATCGACCAGCACACAAGATACCATGGACCTGTGTTTAGACCAAGAAAGCCACAAAAGGAGTGAAAAGAGGCAGGAAGCGGGCACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
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| 3UTR GCA 90 bp | CCACTAAACTTGGAATGGAAGAAAGGCCGAGTAGTACAACCCTCTTaGGTGTTCCAGTGCCCGCTTCCTGCCTCTTTTCACTCCTTTTGT | + |
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Preference number: 1 (lower is better) Translates to: PLNLEWKKGRVVQPS*VFQCPLPASFHSFC Trigger: ACAAAAGGAGTGAAAAGAGGCAGGAAGCGGGCACTGGAACACGCAAGAGGGTTGTACTACTCGGCCTTTCTTCCATTCCAAGTTTAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
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| 3UTR GCA 90 bp | ATAGACCCTGCAGCACTAACCACCAAGGATGATGGCCGGTCTGAGTaGAACCAGGAAGCAAACATGTTTGTAGCTAACTTTTCCCCCAGT | + |
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Preference number: 1 (lower is better) Translates to: IDPAALTTKDDGRSE*NQEANMFVANFSPS Trigger: ACTGGGGGAAAAGTTAGCTACAAACATGTTTGCTTCCTGGTTGCACTCAGACCGGCCATCATCCTTGGTGGTTAGTGCTGCAGGGTCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
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| 3UTR CCA 90 bp | TTGCGTGTTCCAGTGCCCGCTTCCTGCCTCTTTTCACTCCTTTTGTaGCTTTCTTGGTCTAAACACAGGTCCATGGTATCTTGTGTGCTG | + |
|
Preference number: 1 (lower is better) Translates to: LRVPVPASCLFSLLL*LSWSKHRSMVSCVL Trigger: CAGCACACAAGATACCATGGACCTGTGTTTAGACCAAGAAAGCCACAAAAGGAGTGAAAAGAGGCAGGAAGCGGGCACTGGAACACGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
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| 3UTR TCA 90 bp | GGCTTTGGACTGAGGCTTTGTGCAGTGTTAAGTGCAAGAAATGAGTaGCTGACAGCATTCTCAGTGAGTTCCCAGCAGATTCCTAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: GFGLRLCAVLSARNE*LTAFSVSSQQIPKG Trigger: GCCTTTAGGAATCTGCTGGGAACTCACTGAGAATGCTGTCAGTCACTCATTTCTTGCACTTAACACTGCACAAAGCCTCAGTCCAAAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
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| 3UTR GCA 90 bp | TCTCTAAAGGCCTCATCACCAGTCCTAATATACACTCCTCTACACTaGTCTCAGGAGAACTCAAAAGAGCTGGTCTCTCTATATGGGACA | + |
|
Preference number: 1 (lower is better) Translates to: SLKASSPVLIYTPLH*SQENSKELVSLYGT Trigger: TGTCCCATATAGAGAGACCAGCTCTTTTGAGTTCTCCTGAGAGCAGTGTAGAGGAGTGTATATTAGGACTGGTGATGAGGCCTTTAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
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| 3UTR CCA 90 bp | TGTGGCTTTCTTGGTCTAAACACAGGTCCATGGTATCTTGTGTGCTaGTCGATGTCTTTCATTTGGCGAATGGGAATTGCAACCATCAGA | + |
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Preference number: 1 (lower is better) Translates to: CGFLGLNTGPWYLVC*SMSFIWRMGIATIR Trigger: TCTGATGGTTGCAATTCCCATTCGCCAAATGAAAGACATCGACCAGCACACAAGATACCATGGACCTGTGTTTAGACCAAGAAAGCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
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| 3UTR CCA 90 bp | CTCTTGGCCTGTTCTCCTGAGATTGCCTTTCACCTTCACAAACTCTaGGGCATTTTCTTGCTCTTCTTGCAATTTCTGCTTCTCAAGTTC | + |
|
Preference number: 1 (lower is better) Translates to: LLACSPEIAFHLHKL*GIFLLFLQFLLLKF Trigger: GAACTTGAGAAGCAGAAATTGCAAGAAGAGCAAGAAAATGCCCCAGAGTTTGTGAAGGTGAAAGGCAATCTCAGGAGAACAGGCCAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177125.2 |
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| 3UTR GCA 90 bp | TTTTGTGGCTTTCTTGGTCTAAACACAGGTCCATGGTATCTTGTGTaGTGGTCGATGTCTTTCATTTGGCGAATGGGAATTGCAACCATC | + |
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Preference number: 1 (lower is better) Translates to: FCGFLGLNTGPWYLV*WSMSFIWRMGIATI Trigger: GATGGTTGCAATTCCCATTCGCCAAATGAAAGACATCGACCAGCACACAAGATACCATGGACCTGTGTTTAGACCAAGAAAGCCACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
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| 3UTR CCA 90 bp | TCTTTTCACTCCTTTTGTGGCTTTCTTGGTCTAAACACAGGTCCATaGTATCTTGTGTGCTGGTCGATGTCTTTCATTTGGCGAATGGGA | + |
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Preference number: 1 (lower is better) Translates to: SFHSFCGFLGLNTGP*YLVCWSMSFIWRMG Trigger: TCCCATTCGCCAAATGAAAGACATCGACCAGCACACAAGATACCATGGACCTGTGTTTAGACCAAGAAAGCCACAAAAGGAGTGAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
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| 3UTR TCA 90 bp | TGCTGTCGCTTTAATAGTTCTATTTCCAGGTCGGATTTCTTCTTCTaGGCTTCTTCCTCCTTCTGCTTTATCACTTGGTCTCGTCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: CCRFNSSISRSDFFF*ASSSFCFITWSRLL Trigger: GAGAAGACGAGACCAAGTGATAAAGCAGAAGGAGGAAGAAGCTCAGAAGAAGAAATCCGACCTGGAAATAGAACTATTAAAGCGACAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177125.2 |
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| 3UTR TCA 90 bp | GCCAAGATGGTCATCTTCACAGGAAACAAAAGGGAAAGAAACTTGTaGCCATCCGCCGGAGATGTTCAAAGCTCAAGTCTAAAATATTCA | + |
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Preference number: 1 (lower is better) Translates to: AKMVIFTGNKRERNL*PSAGDVQSSSLKYS Trigger: TGAATATTTTAGACTTGAGCTTTGAACATCTCCGGCGGATGGTCACAAGTTTCTTTCCCTTTTGTTTCCTGTGAAGATGACCATCTTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
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| 3UTR TCA 90 bp | AGGAGAACTCAAAAGAGCTGGTCTCTCTATATGGGACACAGAAGTTaGGTTACACACTCTGGTTTCATCCGAAAAAGAACTGAGAAATTG | + |
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Preference number: 1 (lower is better) Translates to: RRTQKSWSLYMGHRS*VTHSGFIRKRTEKL Trigger: CAATTTCTCAGTTCTTTTTCGGATGAAACCAGAGTGTGTAACTCAACTTCTGTGTCCCATATAGAGAGACCAGCTCTTTTGAGTTCTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
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| 3UTR-3UTR TCA 90 bp | CGACACTGCTCAGTTGGTGACCTGTCCTCAGGCTTTGGACTGAGGCTTTGTGCACGTCACCCTACCACCTaGTGTCATTATTCTGTATGC | + |
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Preference number: 2 (lower is better) Translates to: RHCSVGDLSSGFGLRLCARHPTT*CHYSVC Trigger: GCATACAGAATAATGACATCAGGTGGTAGGGTGACG...TGCACAAAGCCTCAGTCCAAAGCCTGAGGACAGGTCACCAACTGAGCAGTGTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
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| 3UTR CAA 90 bp | CCCACTAAACTTGGAATGGAAGAAAGGCCGAGTAGTACAACCCTCTaGCGTGTTCCAGTGCCCGCTTCCTGCCTCTTTTCACTCCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: PTKLGMEERPSSTTL*RVPVPASCLFSLLL Trigger: CAAAAGGAGTGAAAAGAGGCAGGAAGCGGGCACTGGAACACGCAAGAGGGTTGTACTACTCGGCCTTTCTTCCATTCCAAGTTTAGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGTCTGGATTCTCTTCCTCAGGACTTTGGCCCAAGAACAGTACTGTAGAGCCAGTGCCCGCTTCCTaGCTCTTTTCACTCCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: QLSGFSSSGLWPKNSTVEPVPAS*LFSLLL Trigger: CAAAAGGAGTGAAAAGAGGCAGGAAGCGGGCACTGG...CTCTACAGTACTGTTCTTGGGCCAAAGTCCTGAGGAAGAGAATCCAGACAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
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| 3UTR CAA 90 bp | CTCTTGCGTGTTCCAGTGCCCGCTTCCTGCCTCTTTTCACTCCTTTaGTGGCTTTCTTGGTCTAAACACAGGTCCATGGTATCTTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LLRVPVPASCLFSLL*WLSWSKHRSMVSCV Trigger: CACACAAGATACCATGGACCTGTGTTTAGACCAAGAAAGCCACAAAAGGAGTGAAAAGAGGCAGGAAGCGGGCACTGGAACACGCAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCTCAGCTGTCTGGATTCTCTTCCTCAGGACTTTGGCCCAAGAACAGTACTGCCAGTGCCCGCTTCCTaGCTCTTTTCACTCCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: ILSCLDSLPQDFGPRTVLPVPAS*LFSLLL Trigger: CAAAAGGAGTGAAAAGAGGCAGGAAGCGGGCACTGG...CAGTACTGTTCTTGGGCCAAAGTCCTGAGGAAGAGAATCCAGACAGCTGAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCTCAGCTGTCTGGATTCTCTTCCTCAGGACTTTGGCCCAAGAACAGTACTGCTCCTACAGAGATGGTaGGGACACATCAGGTCACAC | + |
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Preference number: 2 (lower is better) Translates to: ILSCLDSLPQDFGPRTVLLLQRW*GHIRSH Trigger: GTGTGACCTGATGTGTCCCCACCATCTCTGTAGGAG...CAGTACTGTTCTTGGGCCAAAGTCCTGAGGAAGAGAATCCAGACAGCTGAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000177125.2 ENSMUST00000226435.2 |
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| 3UTR-3UTR CCA 90 bp | CGACACTGCTCAGTTGGTGACCTGTCCTCAGGCTTTGGACTGAGGCTTTGTGCACTTTTGTGGCTTTCTTaGTCTAAACACAGGTCCATG | + |
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Preference number: 2 (lower is better) Translates to: RHCSVGDLSSGFGLRLCALLWLS*SKHRSM Trigger: CATGGACCTGTGTTTAGACCAAGAAAGCCACAAAAG...TGCACAAAGCCTCAGTCCAAAGCCTGAGGACAGGTCACCAACTGAGCAGTGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTCGATGTCTTTCATTTGGCGAATGGGAATTGCAACCATCAGAGACAACTCACTCCTACAGAGATGGTaGGGACACATCAGGTCACAC | + |
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Preference number: 2 (lower is better) Translates to: WSMSFIWRMGIATIRDNSLLQRW*GHIRSH Trigger: GTGTGACCTGATGTGTCCCCACCATCTCTGTAGGAG...TGAGTTGTCTCTGATGGTTGCAATTCCCATTCGCCAAATGAAAGACATCGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGTCTGGATTCTCTTCCTCAGGACTTTGGCCCAAGAACAGTACTGTAGAGTCTTCCTCAGGACTTTaGCCCAAGAACAGTACTGTA | + |
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Preference number: 2 (lower is better) Translates to: QLSGFSSSGLWPKNSTVESSSGL*PKNSTV Trigger: TACAGTACTGTTCTTGGGCCAAAGTCCTGAGGAAGA...CTCTACAGTACTGTTCTTGGGCCAAAGTCCTGAGGAAGAGAATCCAGACAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000177125.2 ENSMUST00000226435.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTGCCCGCTTCCTGCCTCTTTTCACTCCTTTTGTGGCTTTCTTGGTCTAAACTCTGGGGCATTTTCTTaGTCTTCTTGCAATTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: QCPLPASFHSFCGFLGLNSGAFS*SSCNFC Trigger: GCAGAAATTGCAAGAAGAGCAAGAAAATGCCCCAGA...GTTTAGACCAAGAAAGCCACAAAAGGAGTGAAAAGAGGCAGGAAGCGGGCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000177125.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCTCAGCTGTCTGGATTCTCTTCCTCAGGACTTTGGCCCAAGAACAGTACTGTCTTCCTCAGGACTTTaGCCCAAGAACAGTACTGTA | + |
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Preference number: 2 (lower is better) Translates to: ILSCLDSLPQDFGPRTVLSSSGL*PKNSTV Trigger: TACAGTACTGTTCTTGGGCCAAAGTCCTGAGGAAGA...CAGTACTGTTCTTGGGCCAAAGTCCTGAGGAAGAGAATCCAGACAGCTGAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000177125.2 ENSMUST00000226435.2 |
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| 3UTR-3UTR GCA 90 bp | GGTATCTTGTGTGCTGGTCGATGTCTTTCATTTGGCGAATGGGAATTGCAACCATTGGCGAATGGGAATTaGAACCATCAGAGACAACTC | + |
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Preference number: 2 (lower is better) Translates to: GILCAGRCLSFGEWELQPLANGN*NHQRQL Trigger: GAGTTGTCTCTGATGGTTGCAATTCCCATTCGCCAA...TGGTTGCAATTCCCATTCGCCAAATGAAAGACATCGACCAGCACACAAGATACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCTGAGATTGCCTTTCACCTTCACAAACTCTGGGGCATTTTCTTGCTCTTCTAGCTGCTCCAGCTTCTaGTGTCGCTTTAATAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: LLRLPFTFTNSGAFSCSSSCSSF*CRFNSS Trigger: AGAACTATTAAAGCGACAGCAGAAGCTGGAGCAGCT...AGAAGAGCAAGAAAATGCCCCAGAGTTTGTGAAGGTGAAAGGCAATCTCAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177125.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTGGCTTTCTTGGTCTAAACACAGGTCCATGGTATCTTGTGTGCTGGTCGTCTTCCTCAGGACTTTaGCCCAAGAACAGTACTGTA | + |
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Preference number: 2 (lower is better) Translates to: FCGFLGLNTGPWYLVCWSSSSGL*PKNSTV Trigger: TACAGTACTGTTCTTGGGCCAAAGTCCTGAGGAAGA...CGACCAGCACACAAGATACCATGGACCTGTGTTTAGACCAAGAAAGCCACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGGCTTTCTTGGTCTAAACACAGGTCCATGGTATCTTGTGTGCTGGTCGATGAAATTCTCAGCTGTCTaGATTCTCTTCCTCAGGACT | + |
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Preference number: 2 (lower is better) Translates to: CGFLGLNTGPWYLVCWSMKFSAV*ILFLRT Trigger: AGTCCTGAGGAAGAGAATCCAGACAGCTGAGAATTT...CATCGACCAGCACACAAGATACCATGGACCTGTGTTTAGACCAAGAAAGCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTTTCTTGGTCTAAACACAGGTCCATGGTATCTTGTGTGCTGGTCGATGTCTCTTTTGTGGCTTTCTTaGTCTAAACACAGGTCCATG | + |
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Preference number: 2 (lower is better) Translates to: GFLGLNTGPWYLVCWSMSLLWLS*SKHRSM Trigger: CATGGACCTGTGTTTAGACCAAGAAAGCCACAAAAG...AGACATCGACCAGCACACAAGATACCATGGACCTGTGTTTAGACCAAGAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTCCTGAGATTGCCTTTCACCTTCACAAACTCTGGGGCATTTTCTTGCTCAAATTCTCAGCTGTCTaGATTCTCTTCCTCAGGACT | + |
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Preference number: 2 (lower is better) Translates to: CSPEIAFHLHKLWGIFLLKFSAV*ILFLRT Trigger: AGTCCTGAGGAAGAGAATCCAGACAGCTGAGAATTT...GAGCAAGAAAATGCCCCAGAGTTTGTGAAGGTGAAAGGCAATCTCAGGAGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177125.2 |
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| 3UTR-3UTR CCA 90 bp | AAATTCTCAGCTGTCTGGATTCTCTTCCTCAGGACTTTGGCCCAAGAACAGTACCTTTTGTGGCTTTCTTaGTCTAAACACAGGTCCATG | + |
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Preference number: 2 (lower is better) Translates to: KFSAVWILFLRTLAQEQYLLWLS*SKHRSM Trigger: CATGGACCTGTGTTTAGACCAAGAAAGCCACAAAAG...GTACTGTTCTTGGGCCAAAGTCCTGAGGAAGAGAATCCAGACAGCTGAGAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
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| 3UTR-3UTR CCA 90 bp | GGTATCTTGTGTGCTGGTCGATGTCTTTCATTTGGCGAATGGGAATTGCAACCACCACTAAACTTGGAATaGAAGAAAGGCCGAGTAGTA | + |
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Preference number: 2 (lower is better) Translates to: GILCAGRCLSFGEWELQPPLNLE*KKGRVV Trigger: TACTACTCGGCCTTTCTTCCATTCCAAGTTTAGTGG...TGGTTGCAATTCCCATTCGCCAAATGAAAGACATCGACCAGCACACAAGATACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTTTTCACTCCTTTTGTGGCTTTCTTGGTCTAAACACAGGTCCATGGTATCTTTCATTTGGCGAATaGGAATTGCAACCATCAGAG | + |
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Preference number: 2 (lower is better) Translates to: ASFHSFCGFLGLNTGPWYLSFGE*ELQPSE Trigger: CTCTGATGGTTGCAATTCCCATTCGCCAAATGAAAG...ATACCATGGACCTGTGTTTAGACCAAGAAAGCCACAAAAGGAGTGAAAAGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTTTTCACTCCTTTTGTGGCTTTCTTGGTCTAAACACAGGTCCATGGTATCTTTCTGCTTTATCACTTaGTCTCGTCTTCTCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LFSLLLWLSWSKHRSMVSFCFIT*SRLLFS Trigger: GGAGAAGAGAAGACGAGACCAAGTGATAAAGCAGAA...AGATACCATGGACCTGTGTTTAGACCAAGAAAGCCACAAAAGGAGTGAAAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177125.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGGATTCCAAAGCGCTACATCTGCTATTCTATGCATCATGAAAGGAAACAGACTTTCATTTGGCGAATaGGAATTGCAACCATCAGAG | + |
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Preference number: 2 (lower is better) Translates to: QGFQSATSAILCIMKGNRLSFGE*ELQPSE Trigger: CTCTGATGGTTGCAATTCCCATTCGCCAAATGAAAG...TCTGTTTCCTTTCATGATGCATAGAATAGCAGATGTAGCGCTTTGGAATCCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
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| 3UTR CAA 90 bp | ATTTTGCATGAGAACTTTCATATTATTTGTAACTTAGATGTCTCTTaGAACAGCATGCTAGCTAGCAAGAGGGAACTGAGCAGCCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: ILHENFHIICNLDVS*NSMLASKRELSSLA Trigger: GGCAAGGCTGCTCAGTTCCCTCTTGCTAGCTAGCATGCTGTTCAAAGAGACATCTAAGTTACAAATAATATGAAAGTTCTCATGCAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGGTGCTGACATGTTCAAATGTCTTATCCTGTTTCTGAACTTCAATGTCAACCCACTAAACTTGGAATaGAAGAAAGGCCGAGTAGTA | + |
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Preference number: 2 (lower is better) Translates to: MGADMFKCLILFLNFNVNPLNLE*KKGRVV Trigger: TACTACTCGGCCTTTCTTCCATTCCAAGTTTAGTGG...GTTGACATTGAAGTTCAGAAACAGGATAAGACATTTGAACATGTCAGCACCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
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| 3UTR-3UTR CCA 90 bp | CATATTATTTGTAACTTAGATGTCTCTTTGAACAGCATGCTAGCTAGCAAGAGGGCTGGTCTCTCTATATaGGACACAGAAGTTGAGTTA | + |
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Preference number: 2 (lower is better) Translates to: HIICNLDVSLNSMLASKRAGLSI*DTEVEL Trigger: TAACTCAACTTCTGTGTCCCATATAGAGAGACCAGC...CCTCTTGCTAGCTAGCATGCTGTTCAAAGAGACATCTAAGTTACAAATAATATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
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| 3UTR TCA 72 bp | AGCATCAGGCCTTCTATGGGAGCTAGCGATGGCCCTTaGAGATCCTGCCAAGTGGCAGGACATCTCCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: SIRPSMGASDGP*RSCQVAGHLQS Trigger: GCTCTGGAGATGTCCTGCCACTTGGCAGGATCTTCAAGGGCCATCGCTAGCTCCCATAGAAGGCCTGATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
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| 3UTR CCA 72 bp | TGGGAGCTAGCGATGGCCCTTGAAGATCCTGCCAAGTaGCAGGACATCTCCAGAGCTAGCTTCCAGGTAGAT | + |
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Preference number: 3 (lower is better) Translates to: WELAMALEDPAK*QDISRASFQVD Trigger: ATCTACCTGGAAGCTAGCTCTGGAGATGTCCTGCCACTTGGCAGGATCTTCAAGGGCCATCGCTAGCTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
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| 3UTR GCA 72 bp | TTGGAATGGAAGAAAGGCCGAGTAGTACAACCCTCTTaGGTGTTCCAGTGCCCGCTTCCTGCCTCTTTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LEWKKGRVVQPS*VFQCPLPASFH Trigger: GTGAAAAGAGGCAGGAAGCGGGCACTGGAACACGCAAGAGGGTTGTACTACTCGGCCTTTCTTCCATTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| 3UTR GCA 72 bp | GCAGCCTTGCCCAGCACCTCAGCTTTTCCTGAGAGATaGAACACAGTAGTCAGGATCATCCTACCAACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: AALPSTSAFPER*NTVVRIILPTA Trigger: TGCTGTTGGTAGGATGATCCTGACTACTGTGTTGCATCTCTCAGGAAAAGCTGAGGTGCTGGGCAAGGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| 3UTR-3UTR CAA 90 bp | CACAGTAGTCAGGATCATCCTACCAACAGCATCATGCCAAGAGCGCCAAGATGGTGTGTCCCACTAAACTaGGAATGGAAGAAAGGCCGA | + |
|
Preference number: 3 (lower is better) Translates to: HSSQDHPTNSIMPRAPRWCVPLN*EWKKGR Trigger: TCGGCCTTTCTTCCATTCCAAGTTTAGTGGGACACA...CCATCTTGGCGCTCTTGGCATGATGCTGTTGGTAGGATGATCCTGACTACTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| 3UTR GCA 72 bp | GCCTCATCACCAGTCCTAATATACACTCCTCTACACTaGTCTCAGGAGAACTCAAAAGAGCTGGTCTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: ASSPVLIYTPLH*SQENSKELVSL Trigger: TAGAGAGACCAGCTCTTTTGAGTTCTCCTGAGAGCAGTGTAGAGGAGTGTATATTAGGACTGGTGATGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| 3UTR GCA 72 bp | AACACAGTAGTCAGGATCATCCTACCAACAGCATCATaGCAAGAGCGCCAAGATGGTCATCTTCACAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NTVVRIILPTAS*QERQDGHLHRK Trigger: TTTCCTGTGAAGATGACCATCTTGGCGCTCTTGGCATGATGCTGTTGGTAGGATGATCCTGACTACTGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| 3UTR CCA 72 bp | GCTTCCTGCCTCTTTTCACTCCTTTTGTGGCTTTCTTaGTCTAAACACAGGTCCATGGTATCTTGTGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ASCLFSLLLWLS*SKHRSMVSCVL Trigger: CAGCACACAAGATACCATGGACCTGTGTTTAGACCAAGAAAGCCACAAAAGGAGTGAAAAGAGGCAGGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTGTGGCTTTCTTGGTCTAAACACAGGTCCATGGTATCTTGTGTGCTGGTCGTTTGGCGAATGGGAATaGCAACCATCAGAGACAACT | + |
|
Preference number: 3 (lower is better) Translates to: FCGFLGLNTGPWYLVCWSFGEWE*QPSETT Trigger: AGTTGTCTCTGATGGTTGCAATTCCCATTCGCCAAA...CGACCAGCACACAAGATACCATGGACCTGTGTTTAGACCAAGAAAGCCACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTATCTTGTGTGCTGGTCGATGTCTTTCATTTGGCGAATGGGAATTGCAACCAGTCGATGTCTTTCATTaGGCGAATGGGAATTGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: GILCAGRCLSFGEWELQPVDVFH*ANGNCN Trigger: GTTGCAATTCCCATTCGCCAAATGAAAGACATCGAC...TGGTTGCAATTCCCATTCGCCAAATGAAAGACATCGACCAGCACACAAGATACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
||
| 3UTR CCA 72 bp | CTTGGTCTAAACACAGGTCCATGGTATCTTGTGTGCTaGTCGATGTCTTTCATTTGGCGAATGGGAATTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LGLNTGPWYLVC*SMSFIWRMGIA Trigger: TGCAATTCCCATTCGCCAAATGAAAGACATCGACCAGCACACAAGATACCATGGACCTGTGTTTAGACCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
||
| 3UTR CCA 72 bp | ATCTTGTGTGCTGGTCGATGTCTTTCATTTGGCGAATaGGAATTGCAACCATCAGAGACAACTCATCTACCA | + |
|
Preference number: 3 (lower is better) Translates to: ILCAGRCLSFGE*ELQPSETTHLP Trigger: TGGTAGATGAGTTGTCTCTGATGGTTGCAATTCCCATTCGCCAAATGAAAGACATCGACCAGCACACAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
||
| 3UTR CCA 72 bp | TCCTTTTGTGGCTTTCTTGGTCTAAACACAGGTCCATaGTATCTTGTGTGCTGGTCGATGTCTTTCATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SFCGFLGLNTGP*YLVCWSMSFIW Trigger: CCAAATGAAAGACATCGACCAGCACACAAGATACCATGGACCTGTGTTTAGACCAAGAAAGCCACAAAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
||
| 3UTR CCA 72 bp | CTCTCAGGAGAACTCAAAAGAGCTGGTCTCTCTATATaGGACACAGAAGTTGAGTTACACACTCTGGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LSGELKRAGLSI*DTEVELHTLVS Trigger: TGAAACCAGAGTGTGTAACTCAACTTCTGTGTCCCATATAGAGAGACCAGCTCTTTTGAGTTCTCCTGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGTCGATGTCTTTCATTTGGCGAATGGGAATTGCAACCATCAGAGACAACTCACTCTTTTCACTCCTTTaGTGGCTTTCTTGGTCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: WSMSFIWRMGIATIRDNSLFSLL*WLSWSK Trigger: TTTAGACCAAGAAAGCCACAAAAGGAGTGAAAAGAG...TGAGTTGTCTCTGATGGTTGCAATTCCCATTCGCCAAATGAAAGACATCGACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCATTTGGCGAATGGGAATTGCAACCATCAGAGACAACTCATCTACCACAATGCTCTTTTCACTCCTTTaGTGGCTTTCTTGGTCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: FIWRMGIATIRDNSSTTMLFSLL*WLSWSK Trigger: TTTAGACCAAGAAAGCCACAAAAGGAGTGAAAAGAG...CATTGTGGTAGATGAGTTGTCTCTGATGGTTGCAATTCCCATTCGCCAAATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
||
| 3UTR TCA 72 bp | TCATGCCAAGAACCTAAGGGAATTACAGTTAGTTCATaGTGGGTGCTGACATGTTCAAATGTCTTATCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SCQEPKGITVSS*WVLTCSNVLSC Trigger: ACAGGATAAGACATTTGAACATGTCAGCACCCATCATGAACTAACTGTAATTCCCTTAGGTTCTTGGCATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| 3UTR GCA 72 bp | AAGCAAGGATTCCAAAGCGCTACATCTGCTATTCTATaGATCATGAAAGGAAACAGAAGTCTTCAGTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: KQGFQSATSAIL*IMKGNRSLQCR Trigger: TCTACACTGAAGACTTCTGTTTCCTTTCATGATGCATAGAATAGCAGATGTAGCGCTTTGGAATCCTTGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| 3UTR TCA 72 bp | AGCAGTGTGCATGGAGAGGCTTATTTCAACAATCAGTaGATGAACTTTTCTTTCTCAAAGGAAAGGAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: SSVHGEAYFNNQ*MNFSFSKERKM Trigger: CATCTTCCTTTCCTTTGAGAAAGAAAAGTTCATTCACTGATTGTTGAAATAAGCCTCTCCATGCACACTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| 3UTR TCA 72 bp | AACCTAAGGGAATTACAGTTAGTTCATGATGGGTGCTaGCATGTTCAAATGTCTTATCCTGTTTCTGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: NLRELQLVHDGC*HVQMSYPVSEL Trigger: AAGTTCAGAAACAGGATAAGACATTTGAACATGTCAGCACCCATCATGAACTAACTGTAATTCCCTTAGGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| CDS-3UTR GCA 90 bp | GTAGAGGTGTCTAGACGGGGCTCCTACAGAGATGGTGGGGACACATCAGGTCACTTCTCAAGTTCAAGCTaGTCCAGCTTCTGCTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: VEVSRRGSYRDGGDTSGHFSSSS*SSFCCR Trigger: GCGACAGCAGAAGCTGGAGCAGCTTGAACTTGAGAA...GTGACCTGATGTGTCCCCACCATCTCTGTAGGAGCCCCGTCTAGACACCTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000226435.2 |
||
| CDS-3UTR GCA 90 bp | AACAGTACTGTAGAGGTGTCTAGACGGGGCTCCTACAGAGATGGTGGGGACACAACTTGGATGTGTGCCTaGTTTGGCCATGGGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NSTVEVSRRGSYRDGGDTTWMCA*FGHGLD Trigger: GTCCAGCCCATGGCCAAAGCAGGCACACATCCAAGT...TGTGTCCCCACCATCTCTGTAGGAGCCCCGTCTAGACACCTCTACAGTACTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS-3UTR TCA 90 bp | GGACTTTGGCCCAAGAACAGTACTGTAGAGGTGTCTAGACGGGGCTCCTACAGAGGACACTGGGGCTCTTaGTGGGGTTCTTCTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLWPKNSTVEVSRRGSYRGHWGS*WGSSSF Trigger: AAAGGAAGAAGAACCCCATCAAGAGCCCCAGTGTCC...TCTGTAGGAGCCCCGTCTAGACACCTCTACAGTACTGTTCTTGGGCCAAAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| 3UTR CAA 72 bp | CTTGGAATGGAAGAAAGGCCGAGTAGTACAACCCTCTaGCGTGTTCCAGTGCCCGCTTCCTGCCTCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGMEERPSSTTL*RVPVPASCLFS Trigger: TGAAAAGAGGCAGGAAGCGGGCACTGGAACACGCAAGAGGGTTGTACTACTCGGCCTTTCTTCCATTCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| CDS-3UTR TCA 90 bp | AACAGTACTGTAGAGGTGTCTAGACGGGGCTCCTACAGAGATGGTGGGGACACACTTGGCCTGTTCTCCTaGGATTGCCTTTCACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NSTVEVSRRGSYRDGGDTLGLFS*DCLSPS Trigger: TGAAGGTGAAAGGCAATCTCAGGAGAACAGGCCAAG...TGTGTCCCCACCATCTCTGTAGGAGCCCCGTCTAGACACCTCTACAGTACTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000226435.2 |
||
| CDS-3UTR TCA 90 bp | CAGCTGTCTGGATTCTCTTCCTCAGGACTTTGGCCCAAGAACAGTACTGTAGAGGCTTCAGGCTTTTGGTaGGCCTCGATTTCCACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLSGFSSSGLWPKNSTVEASGFW*ASISTW Trigger: CCACGTGGAAATCGAGGCTCACCAAAAGCCTGAAGC...CTCTACAGTACTGTTCTTGGGCCAAAGTCCTGAGGAAGAGAATCCAGACAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS-3UTR GCA 90 bp | GTAGAGGTGTCTAGACGGGGCTCCTACAGAGATGGTGGGGACACATCAGGTCACGCTTCTTCCTCCTTCTaGTTTATCACTTGGTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VEVSRRGSYRDGGDTSGHASSSF*FITWSR Trigger: ACGAGACCAAGTGATAAAGCAGAAGGAGGAAGAAGC...GTGACCTGATGTGTCCCCACCATCTCTGTAGGAGCCCCGTCTAGACACCTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000226435.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGACTTTGGCCCAAGAACAGTACTGTAGAGGTGTCTAGACGGGGCTCCTACTTCTCAAGTTCAAGCTaGTCCAGCTTCTGCTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SGLWPKNSTVEVSRRGSYFSSSS*SSFCCR Trigger: GCGACAGCAGAAGCTGGAGCAGCTTGAACTTGAGAA...GTAGGAGCCCCGTCTAGACACCTCTACAGTACTGTTCTTGGGCCAAAGTCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000226435.2 |
||
| CDS-3UTR GCA 90 bp | AACAGTACTGTAGAGGTGTCTAGACGGGGCTCCTACAGAGATGGTGGGGACACATTCTCAAGTTCAAGCTaGTCCAGCTTCTGCTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: NSTVEVSRRGSYRDGGDTFSSSS*SSFCCR Trigger: GCGACAGCAGAAGCTGGAGCAGCTTGAACTTGAGAA...TGTGTCCCCACCATCTCTGTAGGAGCCCCGTCTAGACACCTCTACAGTACTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000226435.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGGACTTTGGCCCAAGAACAGTACTGTAGAGGTGTCTAGACGGGGCTCCGGGCAAGACCTTTTCTaGTTCATAAGAAGCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSGLWPKNSTVEVSRRGSGQDLF*FIRSSL Trigger: CAGAGAGCTTCTTATGAATCAGAAAAGGTCTTGCCC...GGAGCCCCGTCTAGACACCTCTACAGTACTGTTCTTGGGCCAAAGTCCTGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177125.2 |
||
| CDS-3UTR CCA 90 bp | GGACTTTGGCCCAAGAACAGTACTGTAGAGGTGTCTAGACGGGGCTCCTACAGACACCTTCTGCAGTTCTaGTTTATTCTGAGGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLWPKNSTVEVSRRGSYRHLLQF*FILRGK Trigger: CTTGCCCCTCAGAATAAACCAGAACTGCAGAAGGTG...TCTGTAGGAGCCCCGTCTAGACACCTCTACAGTACTGTTCTTGGGCCAAAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000226435.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGCCCGCTTCCTGCCTCTTTTCACTCCTTTTGTGGCTTTCTTGGTCTAAACCTTGGCCTGTTCTCCTaGGATTGCCTTTCACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QCPLPASFHSFCGFLGLNLGLFS*DCLSPS Trigger: TGAAGGTGAAAGGCAATCTCAGGAGAACAGGCCAAG...GTTTAGACCAAGAAAGCCACAAAAGGAGTGAAAAGAGGCAGGAAGCGGGCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| CDS-3UTR CCA 90 bp | AACAGTACTGTAGAGGTGTCTAGACGGGGCTCCTACAGAGATGGTGGGGACACACACCTTCACAAACTCTaGGGCATTTTCTTGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSTVEVSRRGSYRDGGDTHLHKL*GIFLLF Trigger: GAAGAGCAAGAAAATGCCCCAGAGTTTGTGAAGGTG...TGTGTCCCCACCATCTCTGTAGGAGCCCCGTCTAGACACCTCTACAGTACTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000226435.2 |
||
| CDS-3UTR GCA 90 bp | CTTTGGCCCAAGAACAGTACTGTAGAGGTGTCTAGACGGGGCTCCTACAGAGATAGCTGCTCCAGCTTCTaGTGTCGCTTTAATAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LWPKNSTVEVSRRGSYRDSCSSF*CRFNSS Trigger: AGAACTATTAAAGCGACAGCAGAAGCTGGAGCAGCT...ATCTCTGTAGGAGCCCCGTCTAGACACCTCTACAGTACTGTTCTTGGGCCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000226435.2 |
||
| CDS-3UTR CCA 90 bp | GGACTTTGGCCCAAGAACAGTACTGTAGAGGTGTCTAGACGGGGCTCCTACAGATTCTGCTTTATCACTTaGTCTCGTCTTCTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLWPKNSTVEVSRRGSYRFCFIT*SRLLFS Trigger: GGAGAAGAGAAGACGAGACCAAGTGATAAAGCAGAA...TCTGTAGGAGCCCCGTCTAGACACCTCTACAGTACTGTTCTTGGGCCAAAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000226435.2 |
||
| CDS-3UTR CCA 90 bp | TGGTCGATGTCTTTCATTTGGCGAATGGGAATTGCAACCATCAGAGACAACTCATGCCTGCTTTGGCCATaGGCTGGACATAGATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WSMSFIWRMGIATIRDNSCLLWP*AGHRWQ Trigger: CTGCCATCTATGTCCAGCCCATGGCCAAAGCAGGCA...TGAGTTGTCTCTGATGGTTGCAATTCCCATTCGCCAAATGAAAGACATCGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS-3UTR GCA 90 bp | GTGCCCGCTTCCTGCCTCTTTTCACTCCTTTTGTGGCTTTCTTGGTCTAAACACGCTTCTTCCTCCTTCTaGTTTATCACTTGGTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VPASCLFSLLLWLSWSKHASSSF*FITWSR Trigger: ACGAGACCAAGTGATAAAGCAGAAGGAGGAAGAAGC...GTGTTTAGACCAAGAAAGCCACAAAAGGAGTGAAAAGAGGCAGGAAGCGGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGCCCGCTTCCTGCCTCTTTTCACTCCTTTTGTGGCTTTCTTGGTCTAAACGCTGTTATTGCCATTTaGGGTGCCATTTTGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QCPLPASFHSFCGFLGLNAVIAI*GAILLQ Trigger: TTGGAGCAAAATGGCACCGCAAATGGCAATAACAGC...GTTTAGACCAAGAAAGCCACAAAAGGAGTGAAAAGAGGCAGGAAGCGGGCACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAGCTGTCTGGATTCTCTTCCTCAGGACTTTGGCCCAAGAACAGTACTGTAGGGTTGATAAGCTTCTaGGGCCTAATTAGCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQLSGFSSSGLWPKNSTVGLISF*GLISSG Trigger: TCCTGAGCTAATTAGGCCCCAGAAGCTTATCAACCC...TACAGTACTGTTCTTGGGCCAAAGTCCTGAGGAAGAGAATCCAGACAGCTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000177125.2 ENSMUST00000226435.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCTGTCTGGATTCTCTTCCTCAGGACTTTGGCCCAAGAACAGTACTGTAGAGGGTTGATAAGCTTCTaGGGCCTAATTAGCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SAVWILFLRTLAQEQYCRGLISF*GLISSG Trigger: TCCTGAGCTAATTAGGCCCCAGAAGCTTATCAACCC...TCTACAGTACTGTTCTTGGGCCAAAGTCCTGAGGAAGAGAATCCAGACAGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000177125.2 ENSMUST00000226435.2 |
||
| CDS-3UTR CCA 90 bp | CTCTTTTCACTCCTTTTGTGGCTTTCTTGGTCTAAACACAGGTCCATGGTATCTGGGGTCTCTACAGGCTaGACAGCAGTGTGTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFSLLLWLSWSKHRSMVSGVSTG*TAVCLL Trigger: CAGCAAACACACTGCTGTCCAGCCTGTAGAGACCCC...AGATACCATGGACCTGTGTTTAGACCAAGAAAGCCACAAAAGGAGTGAAAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS-3UTR GCA 90 bp | GGATTCTCTTCCTCAGGACTTTGGCCCAAGAACAGTACTGTAGAGGTGTCTAGAAGCTGCTCCAGCTTCTaGTGTCGCTTTAATAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GFSSSGLWPKNSTVEVSRSCSSF*CRFNSS Trigger: AGAACTATTAAAGCGACAGCAGAAGCTGGAGCAGCT...TCTAGACACCTCTACAGTACTGTTCTTGGGCCAAAGTCCTGAGGAAGAGAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000226435.2 |
||
| CDS-3UTR GCA 90 bp | TTGTGGCTTTCTTGGTCTAAACACAGGTCCATGGTATCTTGTGTGCTGGTCGATGGACAGCAGTGTGTTTaGTGTTATTGCCATTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LWLSWSKHRSMVSCVLVDGQQCV*CYCHLR Trigger: CCGCAAATGGCAATAACAGCAAACACACTGCTGTCC...ATCGACCAGCACACAAGATACCATGGACCTGTGTTTAGACCAAGAAAGCCACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCTTCCTCAGGACTTTGGCCCAAGAACAGTACTGTAGAGGTGTCTAGACGGTTCTGCTTTATCACTTaGTCTCGTCTTCTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSSSGLWPKNSTVEVSRRFCFIT*SRLLFS Trigger: GGAGAAGAGAAGACGAGACCAAGTGATAAAGCAGAA...CCGTCTAGACACCTCTACAGTACTGTTCTTGGGCCAAAGTCCTGAGGAAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000226435.2 |
||
| 3UTR CAA 72 bp | CTTCTTCTGAGCTTCTTCCTCCTTCTGCTTTATCACTaGGTCTCGTCTTCTCTTCTCCATCACCTTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLSFFLLLLYH*VSSSLLHHLLQ Trigger: CTGCAGAAGGTGATGGAGAAGAGAAGACGAGACCAAGTGATAAAGCAGAAGGAGGAAGAAGCTCAGAAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177125.2 |
||
| CDS-3UTR TCA 90 bp | TTCATTTGGCGAATGGGAATTGCAACCATCAGAGACAACTCATCTACCACAATGCTTGGCCTGTTCTCCTaGGATTGCCTTTCACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FIWRMGIATIRDNSSTTMLGLFS*DCLSPS Trigger: TGAAGGTGAAAGGCAATCTCAGGAGAACAGGCCAAG...CATTGTGGTAGATGAGTTGTCTCTGATGGTTGCAATTCCCATTCGCCAAATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| CDS-3UTR GCA 90 bp | GGTATCTTGTGTGCTGGTCGATGTCTTTCATTTGGCGAATGGGAATTGCAACCAGCTTCTTCCTCCTTCTaGTTTATCACTTGGTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GILCAGRCLSFGEWELQPASSSF*FITWSR Trigger: ACGAGACCAAGTGATAAAGCAGAAGGAGGAAGAAGC...TGGTTGCAATTCCCATTCGCCAAATGAAAGACATCGACCAGCACACAAGATACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| CDS-3UTR GCA 90 bp | TCTCAGCTGTCTGGATTCTCTTCCTCAGGACTTTGGCCCAAGAACAGTACTGTATATTGCCATTTGCGGTaGCATTTTGCTCCAAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SQLSGFSSSGLWPKNSTVYCHLR*HFAPSV Trigger: TACACTTGGAGCAAAATGGCACCGCAAATGGCAATA...TACAGTACTGTTCTTGGGCCAAAGTCCTGAGGAAGAGAATCCAGACAGCTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS-3UTR CCA 90 bp | GGATTCTCTTCCTCAGGACTTTGGCCCAAGAACAGTACTGTAGAGGTGTCTAGATTCTGCTTTATCACTTaGTCTCGTCTTCTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GFSSSGLWPKNSTVEVSRFCFIT*SRLLFS Trigger: GGAGAAGAGAAGACGAGACCAAGTGATAAAGCAGAA...TCTAGACACCTCTACAGTACTGTTCTTGGGCCAAAGTCCTGAGGAAGAGAATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000226435.2 |
||
| CDS-3UTR CCA 90 bp | GGTATCTTGTGTGCTGGTCGATGTCTTTCATTTGGCGAATGGGAATTGCAACCACACCTTCACAAACTCTaGGGCATTTTCTTGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GILCAGRCLSFGEWELQPHLHKL*GIFLLF Trigger: GAAGAGCAAGAAAATGCCCCAGAGTTTGTGAAGGTG...TGGTTGCAATTCCCATTCGCCAAATGAAAGACATCGACCAGCACACAAGATACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| CDS-3UTR CCA 90 bp | TGGTCGATGTCTTTCATTTGGCGAATGGGAATTGCAACCATCAGAGACAACTCATCTTTCTTCCACCTTTaGGTGACTTGGATGTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: WSMSFIWRMGIATIRDNSSFFHL*VTWMCA Trigger: GGCACACATCCAAGTCACCCAAAGGTGGAAGAAAGA...TGAGTTGTCTCTGATGGTTGCAATTCCCATTCGCCAAATGAAAGACATCGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| 3UTR CAA 72 bp | TGTGCTGGTCGATGTCTTTCATTTGGCGAATGGGAATaGCAACCATCAGAGACAACTCATCTACCACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: CAGRCLSFGEWE*QPSETTHLPQW Trigger: CCATTGTGGTAGATGAGTTGTCTCTGATGGTTGCAATTCCCATTCGCCAAATGAAAGACATCGACCAGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000177125.2 ENSMUST00000226435.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAATTCTCAGCTGTCTGGATTCTCTTCCTCAGGACTTTGGCCCAAGAACAGTCTGGGGCATTTTCTTaGTCTTCTTGCAATTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKFSAVWILFLRTLAQEQSGAFS*SSCNFC Trigger: GCAGAAATTGCAAGAAGAGCAAGAAAATGCCCCAGA...CTGTTCTTGGGCCAAAGTCCTGAGGAAGAGAATCCAGACAGCTGAGAATTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000226435.2 |
||
| CDS-3UTR GCA 90 bp | TGTGCTGGTCGATGTCTTTCATTTGGCGAATGGGAATTGCAACCATCAGAGACATCTGGGGCATTTTCTTaGTCTTCTTGCAATTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CAGRCLSFGEWELQPSETSGAFS*SSCNFC Trigger: GCAGAAATTGCAAGAAGAGCAAGAAAATGCCCCAGA...TGTCTCTGATGGTTGCAATTCCCATTCGCCAAATGAAAGACATCGACCAGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| CDS-3UTR CCA 90 bp | CTCTTTTCACTCCTTTTGTGGCTTTCTTGGTCTAAACACAGGTCCATGGTATCTCACCTTCTGCAGTTCTaGTTTATTCTGAGGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFSLLLWLSWSKHRSMVSHLLQF*FILRGK Trigger: CTTGCCCCTCAGAATAAACCAGAACTGCAGAAGGTG...AGATACCATGGACCTGTGTTTAGACCAAGAAAGCCACAAAAGGAGTGAAAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| CDS-3UTR TCA 90 bp | TTCATTTGGCGAATGGGAATTGCAACCATCAGAGACAACTCATCTACCACAATGTGGCATGTCAATAATTaGTGGTCTAGGGATGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: FIWRMGIATIRDNSSTTMWHVNN*WSRDGR Trigger: ACGTCCATCCCTAGACCATCAATTATTGACATGCCA...CATTGTGGTAGATGAGTTGTCTCTGATGGTTGCAATTCCCATTCGCCAAATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS-3UTR GCA 90 bp | GCCTCTTTTCACTCCTTTTGTGGCTTTCTTGGTCTAAACACAGGTCCATGGTATTCTGGGGCATTTTCTTaGTCTTCTTGCAATTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASFHSFCGFLGLNTGPWYSGAFS*SSCNFC Trigger: GCAGAAATTGCAAGAAGAGCAAGAAAATGCCCCAGA...ATACCATGGACCTGTGTTTAGACCAAGAAAGCCACAAAAGGAGTGAAAAGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| CDS-3UTR GCA 90 bp | CACAGGAAACAAAAGGGAAAGAAACTTGTGACCATCCGCCGGAGATGTTCAAAGTGTGTTTGCTGTTATTaGCATTTGCGGTGCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: HRKQKGKKLVTIRRRCSKCVCCY*HLRCHF Trigger: AAAATGGCACCGCAAATGGCAATAACAGCAAACACA...CTTTGAACATCTCCGGCGGATGGTCACAAGTTTCTTTCCCTTTTGTTTCCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS-3UTR CCA 90 bp | AAATTCTCAGCTGTCTGGATTCTCTTCCTCAGGACTTTGGCCCAAGAACAGTACATCTTCTATGTAGTCTaGCTCAGCCATGATGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KFSAVWILFLRTLAQEQYIFYVV*LSHDVS Trigger: AGAAACATCATGGCTGAGCCAGACTACATAGAAGAT...GTACTGTTCTTGGGCCAAAGTCCTGAGGAAGAGAATCCAGACAGCTGAGAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115052.9 ENSMUST00000226435.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTTTCATTTGGCGAATGGGAATTGCAACCATCAGAGACAACTCATCTACCACATTTTCCCTGGTATTaGCAAAACAGGACAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CLSFGEWELQPSETTHLPHFPWY*QNRTAK Trigger: CTTTGCTGTCCTGTTTTGGCAATACCAGGGAAAATG...TGGTAGATGAGTTGTCTCTGATGGTTGCAATTCCCATTCGCCAAATGAAAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS-3UTR CCA 90 bp | ATGGGTGCTGACATGTTCAAATGTCTTATCCTGTTTCTGAACTTCAATGTCAACGGGTTGATAAGCTTCTaGGGCCTAATTAGCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MGADMFKCLILFLNFNVNGLISF*GLISSG Trigger: TCCTGAGCTAATTAGGCCCCAGAAGCTTATCAACCC...GTTGACATTGAAGTTCAGAAACAGGATAAGACATTTGAACATGTCAGCACCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTTTCATTTGGCGAATGGGAATTGCAACCATCAGAGACAACTCATCTACCAATCTTCTATGTAGTCTaGCTCAGCCATGATGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CLSFGEWELQPSETTHLPIFYVV*LSHDVS Trigger: AGAAACATCATGGCTGAGCCAGACTACATAGAAGAT...TGGTAGATGAGTTGTCTCTGATGGTTGCAATTCCCATTCGCCAAATGAAAGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| 3UTR CAA 72 bp | GAGAACTTTCATATTATTTGTAACTTAGATGTCTCTTaGAACAGCATGCTAGCTAGCAAGAGGGAACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ENFHIICNLDVS*NSMLASKRELS Trigger: GCTCAGTTCCCTCTTGCTAGCTAGCATGCTGTTCAAAGAGACATCTAAGTTACAAATAATATGAAAGTTCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| 3UTR CAA 72 bp | ACACACTCTGGTTTCATCCGAAAAAGAACTGAGAAATaGCTTCAACTGAAAGGAATAGTTGAGCAAGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: THSGFIRKRTEK*LQLKGIVEQEM Trigger: CATTTCTTGCTCAACTATTCCTTTCAGTTGAAGCAATTTCTCAGTTCTTTTTCGGATGAAACCAGAGTGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCAGGACTTTGGCCCAAGAACAGTACTGTAGAGGTGTCTAGACGGGGCTCCGGCCTGAGCCACCTCTaGGCCTGTTCTCCTGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: SSGLWPKNSTVEVSRRGSGLSHL*ACSPEI Trigger: AATCTCAGGAGAACAGGCCAAGAGGTGGCTCAGGCC...GGAGCCCCGTCTAGACACCTCTACAGTACTGTTCTTGGGCCAAAGTCCTGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000226435.2 |
||
| CDS GCA 90 bp | CTGGTATTGCCAAAACAGGACAGCAAAGCCGAGCATGGGAAGGAGTaGATCCTTCGAGACGGGAGCTTCAGGCTTTTGGTGAGCCTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LVLPKQDSKAEHGKE*ILRDGSFRLLVSLD Trigger: ATCGAGGCTCACCAAAAGCCTGAAGCTCCCGTCTCGAAGGATGCACTCCTTCCCATGCTCGGCTTTGCTGTCCTGTTTTGGCAATACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS-3UTR CAA 90 bp | GTGTCTAGACGGGGCTCCTACAGAGATGGTGGGGACACATCAGGTCACACACAGCCTGTTCTCCTGAGATaGCCTTTCACCTTCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VSRRGSYRDGGDTSGHTQPVLLR*PFTFTN Trigger: GTTTGTGAAGGTGAAAGGCAATCTCAGGAGAACAGG...CTGTGTGTGACCTGATGTGTCCCCACCATCTCTGTAGGAGCCCCGTCTAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000226435.2 |
||
| CDS-3UTR CAA 90 bp | GCTGTCTGGATTCTCTTCCTCAGGACTTTGGCCCAAGAACAGTACTGTAGAGGTGGCCTGAGCCACCTCTaGGCCTGTTCTCCTGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: AVWILFLRTLAQEQYCRGGLSHL*ACSPEI Trigger: AATCTCAGGAGAACAGGCCAAGAGGTGGCTCAGGCC...ACCTCTACAGTACTGTTCTTGGGCCAAAGTCCTGAGGAAGAGAATCCAGACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000226435.2 |
||
| CDS-3UTR CAA 90 bp | GTGTCTAGACGGGGCTCCTACAGAGATGGTGGGGACACATCAGGTCACACACAGTGGACAGCAGTGTGTTaGCTGTTATTGCCATTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: VSRRGSYRDGGDTSGHTQWTAVC*LLLPFA Trigger: CGCAAATGGCAATAACAGCAAACACACTGCTGTCCA...CTGTGTGTGACCTGATGTGTCCCCACCATCTCTGTAGGAGCCCCGTCTAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS-3UTR CAA 90 bp | CACAGGAAACAAAAGGGAAAGAAACTTGTGACCATCCGCCGGAGATGTTCAAAGGGCCTGAGCCACCTCTaGGCCTGTTCTCCTGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: HRKQKGKKLVTIRRRCSKGLSHL*ACSPEI Trigger: AATCTCAGGAGAACAGGCCAAGAGGTGGCTCAGGCC...CTTTGAACATCTCCGGCGGATGGTCACAAGTTTCTTTCCCTTTTGTTTCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| CDS-3UTR CAA 90 bp | AGTCAGGATCATCCTACCAACAGCATCATGCCAAGAGCGCCAAGATGGTCATCTAGGACACTGGGGCTCTaGATGGGGTTCTTCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SQDHPTNSIMPRAPRWSSRTLGL*MGFFFL Trigger: AAGGAAGAAGAACCCCATCAAGAGCCCCAGTGTCCT...AGATGACCATCTTGGCGCTCTTGGCATGATGCTGTTGGTAGGATGATCCTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS TCA 90 bp | CTGGGGCTCTTGATGGGGTTCTTCTTCCTTTGGCATGTCAATAATTaGTGGTCTAGGGATGGACGTCTGGAAAGTAACGGCTTCACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LGLLMGFFFLWHVNN*WSRDGRLESNGFTV Trigger: GACTGTGAAGCCGTTACTTTCCAGACGTCCATCCCTAGACCATCAATTATTGACATGCCAAAGGAAGAAGAACCCCATCAAGAGCCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS GCA 90 bp | GGTCTCTACAGGCTGGACAGCAGTGTGTTTGCTGTTATTGCCATTTaGGGTGCCATTTTGCTCCAAGTGTATACCAGAATCTCGCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GLYRLDSSVFAVIAI*GAILLQVYTRISPF Trigger: AAAAGGCGAGATTCTGGTATACACTTGGAGCAAAATGGCACCGCAAATGGCAATAACAGCAAACACACTGCTGTCCAGCCTGTAGAGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCAGGACTTTGGCCCAAGAACAGTACTGTAGAGGTGTCTAGACGGGGCTCCATTTTCTTGCTCTTCTaGCAATTTCTGCTTCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSGLWPKNSTVEVSRRGSIFLLF*QFLLLK Trigger: CTTGAGAAGCAGAAATTGCAAGAAGAGCAAGAAAAT...GGAGCCCCGTCTAGACACCTCTACAGTACTGTTCTTGGGCCAAAGTCCTGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000226435.2 |
||
| CDS-3UTR CAA 90 bp | GCTGTCTGGATTCTCTTCCTCAGGACTTTGGCCCAAGAACAGTACTGTAGAGGTGCATTTTCCCTGGTATaGCCAAAACAGGACAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: AVWILFLRTLAQEQYCRGAFSLV*PKQDSK Trigger: TTTGCTGTCCTGTTTTGGCAATACCAGGGAAAATGC...ACCTCTACAGTACTGTTCTTGGGCCAAAGTCCTGAGGAAGAGAATCCAGACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS TCA 90 bp | CCGTCTGATAGCATCTTCTGTTCCAACTCAGGACACTGGGGCTCTTaGTGGGGTTCTTCTTCCTTTGGCATGTCAATAATTGATGGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: PSDSIFCSNSGHWGS*WGSSSFGMSIIDGL Trigger: TAGACCATCAATTATTGACATGCCAAAGGAAGAAGAACCCCATCAAGAGCCCCAGTGTCCTGAGTTGGAACAGAAGATGCTATCAGACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS CCA 90 bp | TCTTCCTTTGGCATGTCAATAATTGATGGTCTAGGGATGGACGTCTaGAAAGTAACGGCTTCACAGTCTACTTCCTCATTCAGGGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSFGMSIIDGLGMDV*KVTASQSTSSFRDL Trigger: CAGGTCCCTGAATGAGGAAGTAGACTGTGAAGCCGTTACTTTCCAGACGTCCATCCCTAGACCATCAATTATTGACATGCCAAAGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS-3UTR CAA 90 bp | AACAGTACTGTAGAGGTGTCTAGACGGGGCTCCTACAGAGATGGTGGGGACACAATTTTCTTGCTCTTCTaGCAATTTCTGCTTCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: NSTVEVSRRGSYRDGGDTIFLLF*QFLLLK Trigger: CTTGAGAAGCAGAAATTGCAAGAAGAGCAAGAAAAT...TGTGTCCCCACCATCTCTGTAGGAGCCCCGTCTAGACACCTCTACAGTACTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000226435.2 |
||
| CDS-3UTR CAA 90 bp | TGGTCGATGTCTTTCATTTGGCGAATGGGAATTGCAACCATCAGAGACAACTCACCTGTTCTCCTGAGATaGCCTTTCACCTTCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: WSMSFIWRMGIATIRDNSPVLLR*PFTFTN Trigger: GTTTGTGAAGGTGAAAGGCAATCTCAGGAGAACAGG...TGAGTTGTCTCTGATGGTTGCAATTCCCATTCGCCAAATGAAAGACATCGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027965.11 ENSMUST00000226435.2 |
||
| CDS-3UTR CAA 90 bp | GGTATCTTGTGTGCTGGTCGATGTCTTTCATTTGGCGAATGGGAATTGCAACCAGTGTGTTTGCTGTTATaGCCATTTGCGGTGCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: GILCAGRCLSFGEWELQPVCLLL*PFAVPF Trigger: AAATGGCACCGCAAATGGCAATAACAGCAAACACAC...TGGTTGCAATTCCCATTCGCCAAATGAAAGACATCGACCAGCACACAAGATACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS-3UTR CAA 90 bp | GCTGTCTGGATTCTCTTCCTCAGGACTTTGGCCCAAGAACAGTACTGTAGAGGTATTTTCTTGCTCTTCTaGCAATTTCTGCTTCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: AVWILFLRTLAQEQYCRGIFLLF*QFLLLK Trigger: CTTGAGAAGCAGAAATTGCAAGAAGAGCAAGAAAAT...ACCTCTACAGTACTGTTCTTGGGCCAAAGTCCTGAGGAAGAGAATCCAGACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000226435.2 |
||
| CDS CCA 90 bp | TATCACTTGGTCTCGTCTTCTCTTCTCCATCACCTTCTGCAGTTCTaGTTTATTCTGAGGGGCAAGACCTCTTTTCTGATTCATAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: YHLVSSSLLHHLLQF*FILRGKTSFLIHKK Trigger: CTTCTTATGAATCAGAAAAGAGGTCTTGCCCCTCAGAATAAACCAGAACTGCAGAAGGTGATGGAGAAGAGAAGACGAGACCAAGTGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000115053.9 ENSMUST00000115054.9 ENSMUST00000115055.9 ENSMUST00000226435.2 |
||
| CDS CCA 72 bp | CCTTTGGGTGACTTGGATGTGTGCCTGCTTTGGCCATaGGCTGGACATAGATGGCAGAGTGAGTATCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PLGDLDVCLLWP*AGHRWQSEYPP Trigger: CGGCGGATACTCACTCTGCCATCTATGTCCAGCCCATGGCCAAAGCAGGCACACATCCAAGTCACCCAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS GCA 72 bp | CCAAAACAGGACAGCAAAGCCGAGCATGGGAAGGAGTaGATCCTTCGAGACGGGAGCTTCAGGCTTTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PKQDSKAEHGKE*ILRDGSFRLLV Trigger: CACCAAAAGCCTGAAGCTCCCGTCTCGAAGGATGCACTCCTTCCCATGCTCGGCTTTGCTGTCCTGTTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS CCA 72 bp | CCTGGTATTGCCAAAACAGGACAGCAAAGCCGAGCATaGGAAGGAGTGCATCCTTCGAGACGGGAGCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PGIAKTGQQSRA*EGVHPSRRELQ Trigger: CTGAAGCTCCCGTCTCGAAGGATGCACTCCTTCCCATGCTCGGCTTTGCTGTCCTGTTTTGGCAATACCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS CCA 72 bp | CTTCCACCTTTGGGTGACTTGGATGTGTGCCTGCTTTaGCCATGGGCTGGACATAGATGGCAGAGTGAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: LPPLGDLDVCLL*PWAGHRWQSEY Trigger: ATACTCACTCTGCCATCTATGTCCAGCCCATGGCCAAAGCAGGCACACATCCAAGTCACCCAAAGGTGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS CAA 72 bp | TCCTCAGGGGTCTCTACAGGCTGGACAGCAGTGTGTTaGCTGTTATTGCCATTTGCGGTGCCATTTTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSGVSTGWTAVC*LLLPFAVPFCS Trigger: GGAGCAAAATGGCACCGCAAATGGCAATAACAGCAAACACACTGCTGTCCAGCCTGTAGAGACCCCTGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS CAA 90 bp | CTGGACAGCAGTGTGTTTGCTGTTATTGCCATTTGCGGTGCCATTTaGCTCCAAGTGTATACCAGAATCTCGCCTTTTCTCTGCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LDSSVFAVIAICGAI*LQVYTRISPFLCSS Trigger: AGAGCTGCAGAGAAAAGGCGAGATTCTGGTATACACTTGGAGCAAAATGGCACCGCAAATGGCAATAACAGCAAACACACTGCTGTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS GCA 72 bp | AGGCTGGACAGCAGTGTGTTTGCTGTTATTGCCATTTaGGGTGCCATTTTGCTCCAAGTGTATACCAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: RLDSSVFAVIAI*GAILLQVYTRI Trigger: GATTCTGGTATACACTTGGAGCAAAATGGCACCGCAAATGGCAATAACAGCAAACACACTGCTGTCCAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS GCA 72 bp | TCTCTACAGGCTGGACAGCAGTGTGTTTGCTGTTATTaGCATTTGCGGTGCCATTTTGCTCCAAGTGTATAC | + |
|
Preference number: 6 (lower is better) Translates to: SLQAGQQCVCCY*HLRCHFAPSVY Trigger: GTATACACTTGGAGCAAAATGGCACCGCAAATGGCAATAACAGCAAACACACTGCTGTCCAGCCTGTAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
||
| CDS CAA 90 bp | GTCGGATTTCTTCTTCTGAGCTTCTTCCTCCTTCTGCTTTATCACTaGGTCTCGTCTTCTCTTCTCCATCACCTTCTGCAGTTCTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: VGFLLLSFFLLLLYH*VSSSLLHHLLQFWF Trigger: AAACCAGAACTGCAGAAGGTGATGGAGAAGAGAAGACGAGACCAAGTGATAAAGCAGAAGGAGGAAGAAGCTCAGAAGAAGAAATCCGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000115053.9 ENSMUST00000115054.9 ENSMUST00000115055.9 ENSMUST00000226435.2 |
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| CDS TCA 72 bp | AGCATCTTCTGTTCCAACTCAGGACACTGGGGCTCTTaGTGGGGTTCTTCTTCCTTTGGCATGTCAATAATT | + |
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Preference number: 6 (lower is better) Translates to: SIFCSNSGHWGS*WGSSSFGMSII Trigger: AATTATTGACATGCCAAAGGAAGAAGAACCCCATCAAGAGCCCCAGTGTCCTGAGTTGGAACAGAAGATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
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| CDS CCA 72 bp | GTCTCGTCTTCTCTTCTCCATCACCTTCTGCAGTTCTaGTTTATTCTGAGGGGCAAGACCTCTTTTCTGATT | + |
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Preference number: 6 (lower is better) Translates to: VSSSLLHHLLQF*FILRGKTSFLI Trigger: AATCAGAAAAGAGGTCTTGCCCCTCAGAATAAACCAGAACTGCAGAAGGTGATGGAGAAGAGAAGACGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000027965.11 ENSMUST00000115052.9 ENSMUST00000115053.9 ENSMUST00000115054.9 ENSMUST00000115055.9 ENSMUST00000226435.2 |
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| CDS CCA 72 bp | GGCATGTCAATAATTGATGGTCTAGGGATGGACGTCTaGAAAGTAACGGCTTCACAGTCTACTTCCTCATTC | + |
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Preference number: 6 (lower is better) Translates to: GMSIIDGLGMDV*KVTASQSTSSF Trigger: GAATGAGGAAGTAGACTGTGAAGCCGTTACTTTCCAGACGTCCATCCCTAGACCATCAATTATTGACATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
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| CDS GCA 72 bp | GTGTGTTTGCTGTTATTGCCATTTGCGGTGCCATTTTaGTCCAAGTGTATACCAGAATCTCGCCTTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: VCLLLLPFAVPF*SKCIPESRLFS Trigger: AGAGAAAAGGCGAGATTCTGGTATACACTTGGAGCAAAATGGCACCGCAAATGGCAATAACAGCAAACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
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| CDS CAA 72 bp | AGTGTGTTTGCTGTTATTGCCATTTGCGGTGCCATTTaGCTCCAAGTGTATACCAGAATCTCGCCTTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SVFAVIAICGAI*LQVYTRISPFL Trigger: GAGAAAAGGCGAGATTCTGGTATACACTTGGAGCAAAATGGCACCGCAAATGGCAATAACAGCAAACACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226435.2 |
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