Pregenerated sensors for FAM107A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021750Ensembl transcript IDs: ENSMUST00000036070.15, ENSMUST00000120411.9, ENSMUST00000121887.8, ENSMUST00000137133.2
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCAGGAATAGCTGGCCTTTCAGGTGTGCCTTGCTGGCAGCATTGTaGGCTAGGGTCCTCAGGTTCAGACTGGCTGGAGGAGGGCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: PRNSWPFRCALLAAL*ARVLRFRLAGGGLG Trigger: GCCCAGCCCTCCTCCAGCCAGTCTGAACCTGAGGACCCTAGCCCACAATGCTGCCAGCAAGGCACACCTGAAAGGCCAGCTATTCCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR CCA 90 bp | AGCCAAACTCTGAGGCAAGCTGGCAAGACCGAAAGCTGCTTTGCTTaGGACCCTTCCCACCTGACCACAGCCTGCTGTCGCCTCCCATGC | + |
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Preference number: 1 (lower is better) Translates to: SQTLRQAGKTESCFA*DPSHLTTACCRLPC Trigger: GCATGGGAGGCGACAGCAGGCTGTGGTCAGGTGGGAAGGGTCCCAAGCAAAGCAGCTTTCGGTCTTGCCAGCTTGCCTCAGAGTTTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR GCA 90 bp | ACCGAAAGCTGCTTTGCTTGGGACCCTTCCCACCTGACCACAGCCTaGTGTCGCCTCCCATGCCCTTCCTTGCTACAAACATCTGGTGCC | + |
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Preference number: 1 (lower is better) Translates to: TESCFAWDPSHLTTA*CRLPCPSLLQTSGA Trigger: GGCACCAGATGTTTGTAGCAAGGAAGGGCATGGGAGGCGACAGCAGGCTGTGGTCAGGTGGGAAGGGTCCCAAGCAAAGCAGCTTTCGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR CCA 90 bp | GTCTCCAGCTTCCCAGGAATAGCTGGCCTTTCAGGTGTGCCTTGCTaGCAGCATTGTGGGCTAGGGTCCTCAGGTTCAGACTGGCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: VSSFPGIAGLSGVPC*QHCGLGSSGSDWLE Trigger: CTCCAGCCAGTCTGAACCTGAGGACCCTAGCCCACAATGCTGCCAGCAAGGCACACCTGAAAGGCCAGCTATTCCTGGGAAGCTGGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR GCA 90 bp | TGTGTCTCCAGCTTCCCAGGAATAGCTGGCCTTTCAGGTGTGCCTTaGTGGCAGCATTGTGGGCTAGGGTCCTCAGGTTCAGACTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: CVSSFPGIAGLSGVP*WQHCGLGSSGSDWL Trigger: CAGCCAGTCTGAACCTGAGGACCCTAGCCCACAATGCTGCCAGCAAGGCACACCTGAAAGGCCAGCTATTCCTGGGAAGCTGGAGACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR GCA 90 bp | AGCAATAAAAGCCAAACTCTGAGGCAAGCTGGCAAGACCGAAAGCTaGTTTGCTTGGGACCCTTCCCACCTGACCACAGCCTGCTGTCGC | + |
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Preference number: 1 (lower is better) Translates to: SNKSQTLRQAGKTES*FAWDPSHLTTACCR Trigger: GCGACAGCAGGCTGTGGTCAGGTGGGAAGGGTCCCAAGCAAAGCAGCTTTCGGTCTTGCCAGCTTGCCTCAGAGTTTGGCTTTTATTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR CCA 90 bp | GGGGATGGCACCTCTGGAGGTCTTTCCTGGCAGTGGCTTCCTCTCTaGTGCAAGAAGGCTAGGTGCTCAGAAAGAAAAGTCCAGAGACCT | + |
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Preference number: 1 (lower is better) Translates to: GDGTSGGLSWQWLPL*CKKARCSERKVQRP Trigger: AGGTCTCTGGACTTTTCTTTCTGAGCACCTAGCCTTCTTGCACCAGAGAGGAAGCCACTGCCAGGAAAGACCTCCAGAGGTGCCATCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR GCA 90 bp | GATGGCACCTCTGGAGGTCTTTCCTGGCAGTGGCTTCCTCTCTGGTaGAAGAAGGCTAGGTGCTCAGAAAGAAAAGTCCAGAGACCTTCC | + |
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Preference number: 1 (lower is better) Translates to: DGTSGGLSWQWLPLW*KKARCSERKVQRPS Trigger: GGAAGGTCTCTGGACTTTTCTTTCTGAGCACCTAGCCTTCTTGCACCAGAGAGGAAGCCACTGCCAGGAAAGACCTCCAGAGGTGCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR GCA 90 bp | TGGTGCCCCAGCAGGGAAATCTGTGCTCTGGGGAGTGAGAACTTCTaGTTGTCTGGAAGTGCTCTTCCCACCTGCGAAGGTGAATTATGG | + |
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Preference number: 1 (lower is better) Translates to: WCPSREICALGSENF*LSGSALPTCEGELW Trigger: CCATAATTCACCTTCGCAGGTGGGAAGAGCACTTCCAGACAAGCAGAAGTTCTCACTCCCCAGAGCACAGATTTCCCTGCTGGGGCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
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| 3UTR CCA 90 bp | ATCCATAAGGAAGAGATAGAATCTCCATTCACTGTCAGACCCTGCTaGCCATCCCACCATCATTTCCAGGAGGCAGAGCCCCTGGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: IHKEEIESPFTVRPC*PSHHHFQEAEPLVP Trigger: GGGCACCAGGGGCTCTGCCTCCTGGAAATGATGGTGGGATGGCCAGCAGGGTCTGACAGTGAATGGAGATTCTATCTCTTCCTTATGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
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| 3UTR GCA 90 bp | GGTCTTTCCTGGCAGTGGCTTCCTCTCTGGTGCAAGAAGGCTAGGTaGTCAGAAAGAAAAGTCCAGAGACCTTCCTCTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: GLSWQWLPLWCKKAR*SERKVQRPSSVCVC Trigger: ACACACACACACAGAGGAAGGTCTCTGGACTTTTCTTTCTGAGCACCTAGCCTTCTTGCACCAGAGAGGAAGCCACTGCCAGGAAAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR CCA 90 bp | CAGGCCAAGGAATTCTGTGTGTGTGTGTGTGTGGTGGGAACACTATaGATAGTGAATGAAGAATTTGGGGGCTTCAGAGGAGGCACTGGG | + |
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Preference number: 1 (lower is better) Translates to: QAKEFCVCVCVVGTL*IVNEEFGGFRGGTG Trigger: CCCAGTGCCTCCTCTGAAGCCCCCAAATTCTTCATTCACTATCCATAGTGTTCCCACCACACACACACACACACAGAATTCCTTGGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR CCA 90 bp | TCAGAGGAGGCACTGGGAACCTTCAGGCCAGGGAGCCAAGAGAGTTaGCTATTTTTAATATACCACTCTTGGGTGCGTCAGCCTAACTAT | + |
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Preference number: 1 (lower is better) Translates to: SEEALGTFRPGSQES*LFLIYHSWVRQPNY Trigger: ATAGTTAGGCTGACGCACCCAAGAGTGGTATATTAAAAATAGCCAACTCTCTTGGCTCCCTGGCCTGAAGGTTCCCAGTGCCTCCTCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR TCA 90 bp | AACAGAGTCACAGAGTATCAAGGTAGCTACTATGGTTCCTCTGGATaGCCTGCCTTGAGGTCTCTCCATGATTTGCCATTTCCCTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: NRVTEYQGSYYGSSG*PALRSLHDLPFPWG Trigger: TCCCCAGGGAAATGGCAAATCATGGAGAGACCTCAAGGCAGGTCATCCAGAGGAACCATAGTAGCTACCTTGATACTCTGTGACTCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
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| 3UTR CCA 90 bp | CTGTATTTACCAGTGTTTCTCAACCTGTGGGTTGTGACCCCTTCATaGGGGTGGGAGGCCACACATCAGATATCCTGCATATCAGATATT | + |
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Preference number: 1 (lower is better) Translates to: LYLPVFLNLWVVTPS*GWEATHQISCISDI Trigger: AATATCTGATATGCAGGATATCTGATGTGTGGCCTCCCACCCCCATGAAGGGGTCACAACCCACAGGTTGAGAAACACTGGTAAATACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
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| 3UTR CCA 90 bp | TTACCAGTGTTTCTCAACCTGTGGGTTGTGACCCCTTCATGGGGGTaGGAGGCCACACATCAGATATCCTGCATATCAGATATTTACATT | + |
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Preference number: 1 (lower is better) Translates to: LPVFLNLWVVTPSWG*EATHQISCISDIYI Trigger: AATGTAAATATCTGATATGCAGGATATCTGATGTGTGGCCTCCCACCCCCATGAAGGGGTCACAACCCACAGGTTGAGAAACACTGGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
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| 3UTR CCA 90 bp | ATGGGCTTTTCTAGTAGCTCCTATAGACTTCCACTTCAATTTCATTaGCCATACCTGGTCACATGCTCACCCAAATGTGCAGAGGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: MGFSSSSYRLPLQFH*PYLVTCSPKCAEEA Trigger: AGCCTCCTCTGCACATTTGGGTGAGCATGTGACCAGGTATGGCCAATGAAATTGAAGTGGAAGTCTATAGGAGCTACTAGAAAAGCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
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| 3UTR CCA 90 bp | TTTATTTACAAGGGTTCTGGAGATGGAGAGCTGTTGGCACTTGCTTaGTCAGATGATCATAGGGTTTATGGATCTTTTGGCCTTTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: FIYKGSGDGELLALA*SDDHRVYGSFGLFF Trigger: AAAGAAAAGGCCAAAAGATCCATAAACCCTATGATCATCTGACCAAGCAAGTGCCAACAGCTCTCCATCTCCAGAACCCTTGTAAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
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| 3UTR CCA 90 bp | CTCAATCAAGAAGGAAGAAACAAAGCAAGGCTCTCAGAAAAGGCATaGGCTTTTCTAGTAGCTCCTATAGACTTCCACTTCAATTTCATT | + |
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Preference number: 1 (lower is better) Translates to: LNQEGRNKARLSEKA*AFLVAPIDFHFNFI Trigger: AATGAAATTGAAGTGGAAGTCTATAGGAGCTACTAGAAAAGCCCATGCCTTTTCTGAGAGCCTTGCTTTGTTTCTTCCTTCTTGATTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
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| 3UTR CCA 90 bp | AGGAATTTATTTTTATTTACAAGGGTTCTGGAGATGGAGAGCTGTTaGCACTTGCTTGGTCAGATGATCATAGGGTTTATGGATCTTTTG | + |
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Preference number: 1 (lower is better) Translates to: RNLFLFTRVLEMESC*HLLGQMIIGFMDLL Trigger: CAAAAGATCCATAAACCCTATGATCATCTGACCAAGCAAGTGCCAACAGCTCTCCATCTCCAGAACCCTTGTAAATAAAAATAAATTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGGGCTTCAGAGGAGGCACTGGGAACCTTCAGGCCAGGGAGCCAAGAGAGTTTGGCTGGAGGAGGGCTaGGCCAGAGTAAGTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: WGLQRRHWEPSGQGAKRVWLEEG*ARVSGR Trigger: CCTGCCACTTACTCTGGCCCAGCCCTCCTCCAGCCA...AACTCTCTTGGCTCCCTGGCCTGAAGGTTCCCAGTGCCTCCTCTGAAGCCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGGGCTTCAGAGGAGGCACTGGGAACCTTCAGGCCAGGGAGCCAAGAGAGTTCAGGTTCAGACTGGCTaGAGGAGGGCTGGGCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: WGLQRRHWEPSGQGAKRVQVQTG*RRAGPE Trigger: CTCTGGCCCAGCCCTCCTCCAGCCAGTCTGAACCTG...AACTCTCTTGGCTCCCTGGCCTGAAGGTTCCCAGTGCCTCCTCTGAAGCCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR-3UTR CCA 90 bp | AATAGCTGGCCTTTCAGGTGTGCCTTGCTGGCAGCATTGTGGGCTAGGGTCCTCTGGCTGGAGGAGGGCTaGGCCAGAGTAAGTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: NSWPFRCALLAALWARVLWLEEG*ARVSGR Trigger: CCTGCCACTTACTCTGGCCCAGCCCTCCTCCAGCCA...GAGGACCCTAGCCCACAATGCTGCCAGCAAGGCACACCTGAAAGGCCAGCTATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR CAA 90 bp | AAGCCAAACTCTGAGGCAAGCTGGCAAGACCGAAAGCTGCTTTGCTaGGGACCCTTCCCACCTGACCACAGCCTGCTGTCGCCTCCCATG | + |
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Preference number: 2 (lower is better) Translates to: KPNSEASWQDRKLLC*GPFPPDHSLLSPPM Trigger: CATGGGAGGCGACAGCAGGCTGTGGTCAGGTGGGAAGGGTCCCAAGCAAAGCAGCTTTCGGTCTTGCCAGCTTGCCTCAGAGTTTGGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR-3UTR TCA 90 bp | CCATTTCCCTGGGGACTGCTAAGTCCCTTGGGTGGTCCTACTCTATCCCAGACGTCAACCTGTGGGTTGTaGCCCCTTCATGGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: PFPWGLLSPLGGPTLSQTSTCGL*PLHGGG Trigger: CCCACCCCCATGAAGGGGTCACAACCCACAGGTTGA...CGTCTGGGATAGAGTAGGACCACCCAAGGGACTTAGCAGTCCCCAGGGAAATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTGTGTGTCTCCAGCTTCCCAGGAATAGCTGGCCTTTCAGGTGTGCCTTGTGGCTGGAGGAGGGCTaGGCCAGAGTAAGTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: VCVCLQLPRNSWPFRCALWLEEG*ARVSGR Trigger: CCTGCCACTTACTCTGGCCCAGCCCTCCTCCAGCCA...CAAGGCACACCTGAAAGGCCAGCTATTCCTGGGAAGCTGGAGACACACACACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGCAAGACCGAAAGCTGCTTTGCTTGGGACCCTTCCCACCTGACCACAGCCTTGCTGGCAGCATTGTaGGCTAGGGTCCTCAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: AGKTESCFAWDPSHLTTALLAAL*ARVLRF Trigger: GAACCTGAGGACCCTAGCCCACAATGCTGCCAGCAA...GGCTGTGGTCAGGTGGGAAGGGTCCCAAGCAAAGCAGCTTTCGGTCTTGCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR-3UTR CCA 90 bp | GACCACAGCCTGCTGTCGCCTCCCATGCCCTTCCTTGCTACAAACATCTGGTGCTCAGGTGTGCCTTGCTaGCAGCATTGTGGGCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: DHSLLSPPMPFLATNIWCSGVPC*QHCGLG Trigger: CCCTAGCCCACAATGCTGCCAGCAAGGCACACCTGA...GCACCAGATGTTTGTAGCAAGGAAGGGCATGGGAGGCGACAGCAGGCTGTGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGGGCTTCAGAGGAGGCACTGGGAACCTTCAGGCCAGGGAGCCAAGAGAGTTCTTTCAGGTGTGCCTTaGTGGCAGCATTGTGGGCTA | + |
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Preference number: 2 (lower is better) Translates to: WGLQRRHWEPSGQGAKRVLSGVP*WQHCGL Trigger: TAGCCCACAATGCTGCCAGCAAGGCACACCTGAAAG...AACTCTCTTGGCTCCCTGGCCTGAAGGTTCCCAGTGCCTCCTCTGAAGCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGAGGCAAGCTGGCAAGACCGAAAGCTGCTTTGCTTGGGACCCTTCCCACCTTCAGGTGTGCCTTGCTaGCAGCATTGTGGGCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: SEASWQDRKLLCLGPFPPSGVPC*QHCGLG Trigger: CCCTAGCCCACAATGCTGCCAGCAAGGCACACCTGA...AGGTGGGAAGGGTCCCAAGCAAAGCAGCTTTCGGTCTTGCCAGCTTGCCTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGCAAGACCGAAAGCTGCTTTGCTTGGGACCCTTCCCACCTGACCACAGCCCTTCCCAGGAATAGCTaGCCTTTCAGGTGTGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: AGKTESCFAWDPSHLTTALPRNS*PFRCAL Trigger: CAAGGCACACCTGAAAGGCCAGCTATTCCTGGGAAG...GGCTGTGGTCAGGTGGGAAGGGTCCCAAGCAAAGCAGCTTTCGGTCTTGCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR-3UTR CCA 90 bp | CCATTTCCCTGGGGACTGCTAAGTCCCTTGGGTGGTCCTACTCTATCCCAGACGCTTCAGAGGAGGCACTaGGAACCTTCAGGCCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: PFPWGLLSPLGGPTLSQTLQRRH*EPSGQG Trigger: TCCCTGGCCTGAAGGTTCCCAGTGCCTCCTCTGAAG...CGTCTGGGATAGAGTAGGACCACCCAAGGGACTTAGCAGTCCCCAGGGAAATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCAAGGAATTCTGTGTGTGTGTGTGTGTGGTGGGAACACTATGGATAGTGAAGGGACCCTTCCCACCTaGCCACAGCCTGCTGTCGCC | + |
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Preference number: 2 (lower is better) Translates to: GQGILCVCVCGGNTMDSEGTLPT*PQPAVA Trigger: GGCGACAGCAGGCTGTGGTCAGGTGGGAAGGGTCCC...TTCACTATCCATAGTGTTCCCACCACACACACACACACACAGAATTCCTTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAATAGGCCTTATTGGGCAACTGAGGCAGAATGGAGGGACACTTGGCCCTCTCAGGTTCAGACTGGCTaGAGGAGGGCTGGGCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: RNRPYWATEAEWRDTWPSQVQTG*RRAGPE Trigger: CTCTGGCCCAGCCCTCCTCCAGCCAGTCTGAACCTG...AGAGGGCCAAGTGTCCCTCCATTCTGCCTCAGTTGCCCAATAAGGCCTATTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR CAA 90 bp | CCTTCCCACCTGACCACAGCCTGCTGTCGCCTCCCATGCCCTTCCTaGCTACAAACATCTGGTGCCTTCTTTGCTTGCCCTGTGATTTCT | + |
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Preference number: 2 (lower is better) Translates to: PSHLTTACCRLPCPS*LQTSGAFFACPVIS Trigger: AGAAATCACAGGGCAAGCAAAGAAGGCACCAGATGTTTGTAGCAAGGAAGGGCATGGGAGGCGACAGCAGGCTGTGGTCAGGTGGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTGGTGGGAAGCAGCGAGAGAGACGGAATTGGGACTAACAGAGTCACAGAGTGGAGGAAGGGGCTTCTaGGGAAGAAGAATGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: LWWEAARETELGLTESQSGGRGF*GRRMGG Trigger: CCCACCCATTCTTCTTCCTCAGAAGCCCCTTCCTCC...ACTCTGTGACTCTGTTAGTCCCAATTCCGTCTCTCTCGCTGCTTCCCACCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
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| 3UTR-3UTR CCA 90 bp | CCACTTCAATTTCATTGGCCATACCTGGTCACATGCTCACCCAAATGTGCAGAGTCCTCAGGTTCAGACTaGCTGGAGGAGGGCTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: PLQFHWPYLVTCSPKCAESSGSD*LEEGWA Trigger: GGCCCAGCCCTCCTCCAGCCAGTCTGAACCTGAGGA...CTCTGCACATTTGGGTGAGCATGTGACCAGGTATGGCCAATGAAATTGAAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
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| 3UTR-3UTR CCA 90 bp | AGTAATTTAGGGAGGGCAGTGGGGAGGAGCAATAAAAGCCAAACTCTGAGGCAATCCTCAGGTTCAGACTaGCTGGAGGAGGGCTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: SNLGRAVGRSNKSQTLRQSSGSD*LEEGWA Trigger: GGCCCAGCCCTCCTCCAGCCAGTCTGAACCTGAGGA...TTGCCTCAGAGTTTGGCTTTTATTGCTCCTCCCCACTGCCCTCCCTAAATTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAGGCACTGGGAACCTTCAGGCCAGGGAGCCAAGAGAGTTGGCTATTTTTTTGCTGGCAGCATTGTaGGCTAGGGTCCTCAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: RGGTGNLQAREPRELAIFLLAAL*ARVLRF Trigger: GAACCTGAGGACCCTAGCCCACAATGCTGCCAGCAA...AAAAATAGCCAACTCTCTTGGCTCCCTGGCCTGAAGGTTCCCAGTGCCTCCTCT 54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGGCACTGGGAACCTTCAGGCCAGGGAGCCAAGAGAGTTGGCTATTTTTATCTGGAGGTCTTTCCTaGCAGTGGCTTCCTCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: EEALGTFRPGSQESWLFLSGGLS*QWLPLW Trigger: CCAGAGAGGAAGCCACTGCCAGGAAAGACCTCCAGA...TAAAAATAGCCAACTCTCTTGGCTCCCTGGCCTGAAGGTTCCCAGTGCCTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGGCACTGGGAACCTTCAGGCCAGGGAGCCAAGAGAGTTGGCTATTTTTAAGGCTAAGCCAGAGTTaGGCTGTTCCCAACACTAGG | + |
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Preference number: 2 (lower is better) Translates to: EEALGTFRPGSQESWLFLRLSQS*AVPNTR Trigger: CCTAGTGTTGGGAACAGCTCAACTCTGGCTTAGCCT...TAAAAATAGCCAACTCTCTTGGCTCCCTGGCCTGAAGGTTCCCAGTGCCTCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| 3UTR-3UTR TCA 90 bp | GACCACAGCCTGCTGTCGCCTCCCATGCCCTTCCTTGCTACAAACATCTGGTGCTCTTTGCTTGCCCTGTaGTTTCTAAAACAGGTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: DHSLLSPPMPFLATNIWCSLLAL*FLKQVS Trigger: GGACACCTGTTTTAGAAATCACAGGGCAAGCAAAGA...GCACCAGATGTTTGTAGCAAGGAAGGGCATGGGAGGCGACAGCAGGCTGTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAGGAGGCACTGGGAACCTTCAGGCCAGGGAGCCAAGAGAGTTGGCTATTTTTTGGCTTCCTCTCTGGTaGAAGAAGGCTAGGTGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: RGGTGNLQAREPRELAIFWLPLW*KKARCS Trigger: TGAGCACCTAGCCTTCTTGCACCAGAGAGGAAGCCA...AAAAATAGCCAACTCTCTTGGCTCCCTGGCCTGAAGGTTCCCAGTGCCTCCTCT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTGGCAAGACCGAAAGCTGCTTTGCTTGGGACCCTTCCCACCTGACCACAGCCGGTGCCTTCTTTGCTTaGCCTGTGATTTCTAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: AGKTESCFAWDPSHLTTAGAFFA*PVISKT Trigger: TGTTTTAGAAATCACAGGGCAAGCAAAGAAGGCACC...GGCTGTGGTCAGGTGGGAAGGGTCCCAAGCAAAGCAGCTTTCGGTCTTGCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGTGTGTGGTGGGAACACTATGGATAGTGAATGAAGAATTTGGGGGCTTCAGACACCTGACCACAGCCTaGTGTCGCCTCCCATGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: VCVVGTLWIVNEEFGGFRHLTTA*CRLPCP Trigger: AGGGCATGGGAGGCGACAGCAGGCTGTGGTCAGGTG...TCTGAAGCCCCCAAATTCTTCATTCACTATCCATAGTGTTCCCACCACACACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGAGGCACTGGGAACCTTCAGGCCAGGGAGCCAAGAGAGTTGGCTATTTTTGAATGGAGGGACACTTaGCCCTCTTCCTCACTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: RGGTGNLQAREPRELAIFEWRDT*PSSSLL Trigger: CAGAAGTGAGGAAGAGGGCCAAGTGTCCCTCCATTC...AAAAATAGCCAACTCTCTTGGCTCCCTGGCCTGAAGGTTCCCAGTGCCTCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTGAGGCAAGCTGGCAAGACCGAAAGCTGCTTTGCTTGGGACCCTTCCCACCTTCTTTGCTTGCCCTGTaGTTTCTAAAACAGGTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: SEASWQDRKLLCLGPFPPSLLAL*FLKQVS Trigger: GGACACCTGTTTTAGAAATCACAGGGCAAGCAAAGA...AGGTGGGAAGGGTCCCAAGCAAAGCAGCTTTCGGTCTTGCCAGCTTGCCTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCTGGTGGGAAGCAGCGAGAGAGACGGAATTGGGACTAACAGAGTCACAGAGTATAAAAGCCAAACTCTaGGGCAAGCTGGCAAGACCG | + |
|
Preference number: 2 (lower is better) Translates to: LWWEAARETELGLTESQSIKAKL*GKLARP Trigger: CGGTCTTGCCAGCTTGCCTCAGAGTTTGGCTTTTAT...ACTCTGTGACTCTGTTAGTCCCAATTCCGTCTCTCTCGCTGCTTCCCACCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTCCTCTCTGGTGCAAGAAGGCTAGGTGCTCAGAAAGAAAAGTCCAGAGACCTTTGCTGGCAGCATTGTaGGCTAGGGTCCTCAGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: LPLWCKKARCSERKVQRPLLAAL*ARVLRF Trigger: GAACCTGAGGACCCTAGCCCACAATGCTGCCAGCAA...AGGTCTCTGGACTTTTCTTTCTGAGCACCTAGCCTTCTTGCACCAGAGAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTGCTGGCAATATTGACCTAAGAGTTTATTCCATCACCATGGCAGTGGGGTCTCGGGGATGGCACCTCTaGAGGTCTTTCCTGGCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: SAGNIDLRVYSITMAVGSRGWHL*RSFLAV Trigger: CACTGCCAGGAAAGACCTCCAGAGGTGCCATCCCCG...AGACCCCACTGCCATGGTGATGGAATAAACTCTTAGGTCAATATTGCCAGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGAGGCACTGGGAACCTTCAGGCCAGGGAGCCAAGAGAGTTGGCTATTTTTAAACTCTGAGGCAAGCTaGCAAGACCGAAAGCTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: EEALGTFRPGSQESWLFLNSEAS*QDRKLL Trigger: AAGCAGCTTTCGGTCTTGCCAGCTTGCCTCAGAGTT...TAAAAATAGCCAACTCTCTTGGCTCCCTGGCCTGAAGGTTCCCAGTGCCTCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCCAAGGAATTCTGTGTGTGTGTGTGTGTGGTGGGAACACTATGGATAGTGAAGAAAGCTGCTTTGCTTaGGACCCTTCCCACCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: GQGILCVCVCGGNTMDSEESCFA*DPSHLT Trigger: GGTCAGGTGGGAAGGGTCCCAAGCAAAGCAGCTTTC...TTCACTATCCATAGTGTTCCCACCACACACACACACACACAGAATTCCTTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGAGGCACTGGGAACCTTCAGGCCAGGGAGCCAAGAGAGTTGGCTATTTTTATCTTTGCTTGCCCTGTaGTTTCTAAAACAGGTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: EEALGTFRPGSQESWLFLSLLAL*FLKQVS Trigger: GGACACCTGTTTTAGAAATCACAGGGCAAGCAAAGA...TAAAAATAGCCAACTCTCTTGGCTCCCTGGCCTGAAGGTTCCCAGTGCCTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR TCA 90 bp | CCATTTCCCTGGGGACTGCTAAGTCCCTTGGGTGGTCCTACTCTATCCCAGACGCAGTGCTGGCAATATTaGCCTAAGAGTTTATTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: PFPWGLLSPLGGPTLSQTQCWQY*PKSLFH Trigger: ATGGAATAAACTCTTAGGTCAATATTGCCAGCACTG...CGTCTGGGATAGAGTAGGACCACCCAAGGGACTTAGCAGTCCCCAGGGAAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCCAAGGAATTCTGTGTGTGTGTGTGTGTGGTGGGAACACTATGGATAGTGAACTTTCAGGTGTGCCTTaGTGGCAGCATTGTGGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: GQGILCVCVCGGNTMDSELSGVP*WQHCGL Trigger: TAGCCCACAATGCTGCCAGCAAGGCACACCTGAAAG...TTCACTATCCATAGTGTTCCCACCACACACACACACACACAGAATTCCTTGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCCAAGGAATTCTGTGTGTGTGTGTGTGTGGTGGGAACACTATGGATAGTGAATGGCTTCCTCTCTGGTaGAAGAAGGCTAGGTGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: GQGILCVCVCGGNTMDSEWLPLW*KKARCS Trigger: TGAGCACCTAGCCTTCTTGCACCAGAGAGGAAGCCA...TTCACTATCCATAGTGTTCCCACCACACACACACACACACAGAATTCCTTGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCAGCAGATACTTAAGACAGGTTCACTGTATTTACCAGTGTTTCTCAACCTGTTCCTCAGGTTCAGACTaGCTGGAGGAGGGCTGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: TSRYLRQVHCIYQCFSTCSSGSD*LEEGWA Trigger: GGCCCAGCCCTCCTCCAGCCAGTCTGAACCTGAGGA...ACAGGTTGAGAAACACTGGTAAATACAGTGAACCTGTCTTAAGTATCTGCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACTTCAATTTCATTGGCCATACCTGGTCACATGCTCACCCAAATGTGCAGAGCTTCCCAGGAATAGCTaGCCTTTCAGGTGTGCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: PLQFHWPYLVTCSPKCAELPRNS*PFRCAL Trigger: CAAGGCACACCTGAAAGGCCAGCTATTCCTGGGAAG...CTCTGCACATTTGGGTGAGCATGTGACCAGGTATGGCCAATGAAATTGAAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTGCTGGCAATATTGACCTAAGAGTTTATTCCATCACCATGGCAGTGGGGTCTTCTGGAGGTCTTTCCTaGCAGTGGCTTCCTCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SAGNIDLRVYSITMAVGSSGGLS*QWLPLW Trigger: CCAGAGAGGAAGCCACTGCCAGGAAAGACCTCCAGA...AGACCCCACTGCCATGGTGATGGAATAAACTCTTAGGTCAATATTGCCAGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCCAAGGAATTCTGTGTGTGTGTGTGTGTGGTGGGAACACTATGGATAGTGAAATAAAAGCCAAACTCTaGGGCAAGCTGGCAAGACCG | + |
|
Preference number: 2 (lower is better) Translates to: GQGILCVCVCGGNTMDSEIKAKL*GKLARP Trigger: CGGTCTTGCCAGCTTGCCTCAGAGTTTGGCTTTTAT...TTCACTATCCATAGTGTTCCCACCACACACACACACACACAGAATTCCTTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CCA 90 bp | CTAATGGTCCAGGCATTGCATCCTCAATCAAGAAGGAAGAAACAAAGCAAGGCTGGTCTTTCCTGGCAGTaGCTTCCTCTCTGGTGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: LMVQALHPQSRRKKQSKAGLSWQ*LPLWCK Trigger: CTTGCACCAGAGAGGAAGCCACTGCCAGGAAAGACC...AGCCTTGCTTTGTTTCTTCCTTCTTGATTGAGGATGCAATGCCTGGACCATTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CCA 90 bp | CCATTTCCCTGGGGACTGCTAAGTCCCTTGGGTGGTCCTACTCTATCCCAGACGGTGGTGGGAACACTATaGATAGTGAATGAAGAATTT | + |
|
Preference number: 2 (lower is better) Translates to: PFPWGLLSPLGGPTLSQTVVGTL*IVNEEF Trigger: AAATTCTTCATTCACTATCCATAGTGTTCCCACCAC...CGTCTGGGATAGAGTAGGACCACCCAAGGGACTTAGCAGTCCCCAGGGAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGTGTGTGGTGGGAACACTATGGATAGTGAATGAAGAATTTGGGGGCTTCAGAAACTTGGCAATGTGCTaGTCTAGGCTGGAAGCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: VCVVGTLWIVNEEFGGFRNLAMC*SRLEAR Trigger: TCTGGCTTCCAGCCTAGATCAGCACATTGCCAAGTT...TCTGAAGCCCCCAAATTCTTCATTCACTATCCATAGTGTTCCCACCACACACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR GCA 90 bp | ATAAAACCTCACCAGCAGATACTTAAGACAGGTTCACTGTATTTACCAGTGTTTCACCTGACCACAGCCTaGTGTCGCCTCCCATGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: IKPHQQILKTGSLYLPVFHLTTA*CRLPCP Trigger: AGGGCATGGGAGGCGACAGCAGGCTGTGGTCAGGTG...AAACACTGGTAAATACAGTGAACCTGTCTTAAGTATCTGCTGGTGAGGTTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CCA 90 bp | CTAATGGTCCAGGCATTGCATCCTCAATCAAGAAGGAAGAAACAAAGCAAGGCTCTTCCCAGGAATAGCTaGCCTTTCAGGTGTGCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LMVQALHPQSRRKKQSKALPRNS*PFRCAL Trigger: CAAGGCACACCTGAAAGGCCAGCTATTCCTGGGAAG...AGCCTTGCTTTGTTTCTTCCTTCTTGATTGAGGATGCAATGCCTGGACCATTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CCA 90 bp | ACATACACACACACACACGATGTGTGTGTGTGTTACACATCTATGCAGGTAACAAGGAAGAAGAATGGGTaGGGAAGACCCAGACTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: TYTHTHDVCVCYTSMQVTRKKNG*GRPRLG Trigger: CCCCAGTCTGGGTCTTCCCCACCCATTCTTCTTCCT...TGTTACCTGCATAGATGTGTAACACACACACACATCGTGTGTGTGTGTGTATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCAGCAGATACTTAAGACAGGTTCACTGTATTTACCAGTGTTTCTCAACCTGTCTGTGCTCTGGGGAGTaGGAACTTCTGCTTGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: TSRYLRQVHCIYQCFSTCLCSGE*ELLLVW Trigger: CCAGACAAGCAGAAGTTCTCACTCCCCAGAGCACAG...ACAGGTTGAGAAACACTGGTAAATACAGTGAACCTGTCTTAAGTATCTGCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR TCA 90 bp | TTAGGTAAAACATGGTTGCTAATGGTCCAGGCATTGCATCCTCAATCAAGAAGGATAAAAGCCAAACTCTaGGGCAAGCTGGCAAGACCG | + |
|
Preference number: 2 (lower is better) Translates to: LGKTWLLMVQALHPQSRRIKAKL*GKLARP Trigger: CGGTCTTGCCAGCTTGCCTCAGAGTTTGGCTTTTAT...CCTTCTTGATTGAGGATGCAATGCCTGGACCATTAGCAACCATGTTTTACCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCAGCAGATACTTAAGACAGGTTCACTGTATTTACCAGTGTTTCTCAACCTGTGCAGTTACAATCCCCTaGCCAGGCCAAGGAATTCTG | + |
|
Preference number: 2 (lower is better) Translates to: TSRYLRQVHCIYQCFSTCAVTIP*PGQGIL Trigger: CAGAATTCCTTGGCCTGGTCAGGGGATTGTAACTGC...ACAGGTTGAGAAACACTGGTAAATACAGTGAACCTGTCTTAAGTATCTGCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCCAAGGAATTCTGTGTGTGTGTGTGTGTGGTGGGAACACTATGGATAGTGAAGGTGCCTTCTTTGCTTaGCCTGTGATTTCTAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: GQGILCVCVCGGNTMDSEGAFFA*PVISKT Trigger: TGTTTTAGAAATCACAGGGCAAGCAAAGAAGGCACC...TTCACTATCCATAGTGTTCCCACCACACACACACACACACAGAATTCCTTGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAGGTAAAACATGGTTGCTAATGGTCCAGGCATTGCATCCTCAATCAAGAAGGCTACTATGGTTCCTCTaGATGACCTGCCTTGAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: LGKTWLLMVQALHPQSRRLLWFL*MTCLEV Trigger: GACCTCAAGGCAGGTCATCCAGAGGAACCATAGTAG...CCTTCTTGATTGAGGATGCAATGCCTGGACCATTAGCAACCATGTTTTACCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAAAACCTCACCAGCAGATACTTAAGACAGGTTCACTGTATTTACCAGTGTTTGAAAGCTGCTTTGCTTaGGACCCTTCCCACCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: IKPHQQILKTGSLYLPVFESCFA*DPSHLT Trigger: GGTCAGGTGGGAAGGGTCCCAAGCAAAGCAGCTTTC...AAACACTGGTAAATACAGTGAACCTGTCTTAAGTATCTGCTGGTGAGGTTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CCA 90 bp | CTAATGGTCCAGGCATTGCATCCTCAATCAAGAAGGAAGAAACAAAGCAAGGCTCCATCACCATGGCAGTaGGGTCTTCAAAATAGCATA | + |
|
Preference number: 2 (lower is better) Translates to: LMVQALHPQSRRKKQSKAPSPWQ*GLQNSI Trigger: TATGCTATTTTGAAGACCCCACTGCCATGGTGATGG...AGCCTTGCTTTGTTTCTTCCTTCTTGATTGAGGATGCAATGCCTGGACCATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACTTCAATTTCATTGGCCATACCTGGTCACATGCTCACCCAAATGTGCAGAGTTTATTCCATCACCATaGCAGTGGGGTCTTCAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: PLQFHWPYLVTCSPKCAEFIPSP*QWGLQN Trigger: ATTTTGAAGACCCCACTGCCATGGTGATGGAATAAA...CTCTGCACATTTGGGTGAGCATGTGACCAGGTATGGCCAATGAAATTGAAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAGGTAAAACATGGTTGCTAATGGTCCAGGCATTGCATCCTCAATCAAGAAGGAGAAATAGGCCTTATTaGGCAACTGAGGCAGAATGG | + |
|
Preference number: 2 (lower is better) Translates to: LGKTWLLMVQALHPQSRRRNRPY*ATEAEW Trigger: CCATTCTGCCTCAGTTGCCCAATAAGGCCTATTTCT...CCTTCTTGATTGAGGATGCAATGCCTGGACCATTAGCAACCATGTTTTACCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR CAA 90 bp | TTGGCCTTTTCTTTAGGTAAAACATGGTTGCTAATGGTCCAGGCATaGCATCCTCAATCAAGAAGGAAGAAACAAAGCAAGGCTCTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LAFSLGKTWLLMVQA*HPQSRRKKQSKALR Trigger: TCTGAGAGCCTTGCTTTGTTTCTTCCTTCTTGATTGAGGATGCAATGCCTGGACCATTAGCAACCATGTTTTACCTAAAGAAAAGGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCCATAGGAAATCATTGTATAGTTGCTTTCCAAAAAGCTGTAGAAAGCTAAGGCTTTCAGGTGTGCCTTaGTGGCAGCATTGTGGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: FHRKSLYSCFPKSCRKLRLSGVP*WQHCGL Trigger: TAGCCCACAATGCTGCCAGCAAGGCACACCTGAAAG...CCTTAGCTTTCTACAGCTTTTTGGAAAGCAACTATACAATGATTTCCTATGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR GCA 90 bp | ACATACACACACACACACGATGTGTGTGTGTGTTACACATCTATGCAGGTAACAGGTGCCTTCTTTGCTTaGCCTGTGATTTCTAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: TYTHTHDVCVCYTSMQVTGAFFA*PVISKT Trigger: TGTTTTAGAAATCACAGGGCAAGCAAAGAAGGCACC...TGTTACCTGCATAGATGTGTAACACACACACACATCGTGTGTGTGTGTGTATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAGGTAAAACATGGTTGCTAATGGTCCAGGCATTGCATCCTCAATCAAGAAGGTTTATTCCATCACCATaGCAGTGGGGTCTTCAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: LGKTWLLMVQALHPQSRRFIPSP*QWGLQN Trigger: ATTTTGAAGACCCCACTGCCATGGTGATGGAATAAA...CCTTCTTGATTGAGGATGCAATGCCTGGACCATTAGCAACCATGTTTTACCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR CAA 90 bp | TTATTTTTATTTACAAGGGTTCTGGAGATGGAGAGCTGTTGGCACTaGCTTGGTCAGATGATCATAGGGTTTATGGATCTTTTGGCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LFLFTRVLEMESCWH*LGQMIIGFMDLLAF Trigger: AAAGGCCAAAAGATCCATAAACCCTATGATCATCTGACCAAGCAAGTGCCAACAGCTCTCCATCTCCAGAACCCTTGTAAATAAAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAGGTAAAACATGGTTGCTAATGGTCCAGGCATTGCATCCTCAATCAAGAAGGGTAAGAAATAAAGATTaGCAGTTACAATCCCCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: LGKTWLLMVQALHPQSRRVRNKD*QLQSPD Trigger: GTCAGGGGATTGTAACTGCCAATCTTTATTTCTTAC...CCTTCTTGATTGAGGATGCAATGCCTGGACCATTAGCAACCATGTTTTACCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR CAA 90 bp | CAGGAATTTATTTTTATTTACAAGGGTTCTGGAGATGGAGAGCTGTaGGCACTTGCTTGGTCAGATGATCATAGGGTTTATGGATCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: QEFIFIYKGSGDGEL*ALAWSDDHRVYGSF Trigger: AAAAGATCCATAAACCCTATGATCATCTGACCAAGCAAGTGCCAACAGCTCTCCATCTCCAGAACCCTTGTAAATAAAAATAAATTCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR TCA 90 bp | ATAAAACCTCACCAGCAGATACTTAAGACAGGTTCACTGTATTTACCAGTGTTTTCCCACCTGCGAAGGTaGATTATGGATTTCATTCTT | + |
|
Preference number: 2 (lower is better) Translates to: IKPHQQILKTGSLYLPVFSHLRR*IMDFIL Trigger: AAGAATGAAATCCATAATTCACCTTCGCAGGTGGGA...AAACACTGGTAAATACAGTGAACCTGTCTTAAGTATCTGCTGGTGAGGTTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCCATAGGAAATCATTGTATAGTTGCTTTCCAAAAAGCTGTAGAAAGCTAAGGTATACCACTCTTGGGTaGGTCAGCCTAACTATATGT | + |
|
Preference number: 2 (lower is better) Translates to: FHRKSLYSCFPKSCRKLRYTTLG*VSLTIC Trigger: ACATATAGTTAGGCTGACGCACCCAAGAGTGGTATA...CCTTAGCTTTCTACAGCTTTTTGGAAAGCAACTATACAATGATTTCCTATGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCAGCAGATACTTAAGACAGGTTCACTGTATTTACCAGTGTTTCTCAACCTGTGTAGATCTTCAAAAATaGCATAGGAGCAAAAGATTC | + |
|
Preference number: 2 (lower is better) Translates to: TSRYLRQVHCIYQCFSTCVDLQK*HRSKRF Trigger: GAATCTTTTGCTCCTATGCCATTTTTGAAGATCTAC...ACAGGTTGAGAAACACTGGTAAATACAGTGAACCTGTCTTAAGTATCTGCTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCCATAGGAAATCATTGTATAGTTGCTTTCCAAAAAGCTGTAGAAAGCTAAGGGTGGTGGGAACACTATaGATAGTGAATGAAGAATTT | + |
|
Preference number: 2 (lower is better) Translates to: FHRKSLYSCFPKSCRKLRVVGTL*IVNEEF Trigger: AAATTCTTCATTCACTATCCATAGTGTTCCCACCAC...CCTTAGCTTTCTACAGCTTTTTGGAAAGCAACTATACAATGATTTCCTATGGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR CCA 72 bp | TGGCAGCATTGTGGGCTAGGGTCCTCAGGTTCAGACTaGCTGGAGGAGGGCTGGGCCAGAGTAAGTGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: WQHCGLGSSGSD*LEEGWARVSGR Trigger: CCTGCCACTTACTCTGGCCCAGCCCTCCTCCAGCCAGTCTGAACCTGAGGACCCTAGCCCACAATGCTGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR TCA 72 bp | AGACCGAAAGCTGCTTTGCTTGGGACCCTTCCCACCTaGCCACAGCCTGCTGTCGCCTCCCATGCCCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RPKAALLGTLPT*PQPAVASHALP Trigger: AGGAAGGGCATGGGAGGCGACAGCAGGCTGTGGTCAGGTGGGAAGGGTCCCAAGCAAAGCAGCTTTCGGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR CCA 72 bp | AGCTGGCCTTTCAGGTGTGCCTTGCTGGCAGCATTGTaGGCTAGGGTCCTCAGGTTCAGACTGGCTGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SWPFRCALLAAL*ARVLRFRLAGG Trigger: TCCTCCAGCCAGTCTGAACCTGAGGACCCTAGCCCACAATGCTGCCAGCAAGGCACACCTGAAAGGCCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR GCA 72 bp | AGCCAAACTCTGAGGCAAGCTGGCAAGACCGAAAGCTaGTTTGCTTGGGACCCTTCCCACCTGACCACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SQTLRQAGKTES*FAWDPSHLTTA Trigger: GGCTGTGGTCAGGTGGGAAGGGTCCCAAGCAAAGCAGCTTTCGGTCTTGCCAGCTTGCCTCAGAGTTTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR CCA 72 bp | ATCGGGGATGGCACCTCTGGAGGTCTTTCCTGGCAGTaGCTTCCTCTCTGGTGCAAGAAGGCTAGGTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: IGDGTSGGLSWQ*LPLWCKKARCS Trigger: TGAGCACCTAGCCTTCTTGCACCAGAGAGGAAGCCACTGCCAGGAAAGACCTCCAGAGGTGCCATCCCCGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR CCA 72 bp | AGAGCCCCTGGTGCCCCAGCAGGGAAATCTGTGCTCTaGGGAGTGAGAACTTCTGCTTGTCTGGAAGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RAPGAPAGKSVL*GVRTSACLEVL Trigger: GAGCACTTCCAGACAAGCAGAAGTTCTCACTCCCCAGAGCACAGATTTCCCTGCTGGGGCACCAGGGGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR GCA 72 bp | CCTTCCCACCTGACCACAGCCTGCTGTCGCCTCCCATaGCCTTCCTTGCTACAAACATCTGGTGCCTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PSHLTTACCRLP*PSLLQTSGAFF Trigger: AAAGAAGGCACCAGATGTTTGTAGCAAGGAAGGGCATGGGAGGCGACAGCAGGCTGTGGTCAGGTGGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR CCA 72 bp | TTCCCAGGAATAGCTGGCCTTTCAGGTGTGCCTTGCTaGCAGCATTGTGGGCTAGGGTCCTCAGGTTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: FPGIAGLSGVPC*QHCGLGSSGSD Trigger: GTCTGAACCTGAGGACCCTAGCCCACAATGCTGCCAGCAAGGCACACCTGAAAGGCCAGCTATTCCTGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCTCTCTGGTGCAAGAAGGCTAGGTGCTCAGAAAGAAAAGTCCAGAGACCTGCCTTGCTGGCAGCATaGTGGGCTAGGGTCCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LPLWCKKARCSERKVQRPALLAA*WARVLR Trigger: CCTGAGGACCCTAGCCCACAATGCTGCCAGCAAGGC...AGGTCTCTGGACTTTTCTTTCTGAGCACCTAGCCTTCTTGCACCAGAGAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGTGCCCCAGCAGGGAAATCTGTGCTCTGGGGAGTGAGAACTTCTGCTTGTAGAATGGAGGGACACTaGGCCCTCTTCCTCACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PGAPAGKSVLWGVRTSACRMEGH*ALFLTS Trigger: AGAAGTGAGGAAGAGGGCCAAGTGTCCCTCCATTCT...ACAAGCAGAAGTTCTCACTCCCCAGAGCACAGATTTCCCTGCTGGGGCACCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR CCA 72 bp | TGTGTGTGTGTGTGTCTCCAGCTTCCCAGGAATAGCTaGCCTTTCAGGTGTGCCTTGCTGGCAGCATTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCLQLPRNS*PFRCALLAALW Trigger: CCACAATGCTGCCAGCAAGGCACACCTGAAAGGCCAGCTATTCCTGGGAAGCTGGAGACACACACACACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR CCA 72 bp | GGAAATATCAGTGAGTCTGATCGGGGATGGCACCTCTaGAGGTCTTTCCTGGCAGTGGCTTCCTCTCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GNISESDRGWHL*RSFLAVASSLV Trigger: CACCAGAGAGGAAGCCACTGCCAGGAAAGACCTCCAGAGGTGCCATCCCCGATCAGACTCACTGATATTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR CCA 72 bp | TTTGCCATTTCCCTGGGGACTGCTAAGTCCCTTGGGTaGTCCTACTCTATCCCAGACGTCCTGTCCTACTCC | + |
|
Preference number: 3 (lower is better) Translates to: FAISLGTAKSLG*SYSIPDVLSYS Trigger: GGAGTAGGACAGGACGTCTGGGATAGAGTAGGACCACCCAAGGGACTTAGCAGTCCCCAGGGAAATGGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR TCA 72 bp | GGAGGGCAGTGGGGAGGAGCAATAAAAGCCAAACTCTaGGGCAAGCTGGCAAGACCGAAAGCTGCTTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GGQWGGAIKAKL*GKLARPKAALL Trigger: AAGCAAAGCAGCTTTCGGTCTTGCCAGCTTGCCTCAGAGTTTGGCTTTTATTGCTCCTCCCCACTGCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR TCA 72 bp | AGTAATTCGGGTGTAACAGAGGGAGGAAGGGGCTTCTaGGGAAGAAGAATGGGTGGGGAAGACCCAGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: SNSGVTEGGRGF*GRRMGGEDPDW Trigger: CCAGTCTGGGTCTTCCCCACCCATTCTTCTTCCTCAGAAGCCCCTTCCTCCCTCTGTTACACCCGAATTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR GCA 72 bp | AGCAGGGAAATCTGTGCTCTGGGGAGTGAGAACTTCTaGTTGTCTGGAAGTGCTCTTCCCACCTGCGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SREICALGSENF*LSGSALPTCEG Trigger: ACCTTCGCAGGTGGGAAGAGCACTTCCAGACAAGCAGAAGTTCTCACTCCCCAGAGCACAGATTTCCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR CCA 72 bp | CCTGCCTTGAGGTCTCTCCATGATTTGCCATTTCCCTaGGGACTGCTAAGTCCCTTGGGTGGTCCTACTCTA | + |
|
Preference number: 3 (lower is better) Translates to: PALRSLHDLPFP*GLLSPLGGPTL Trigger: TAGAGTAGGACCACCCAAGGGACTTAGCAGTCCCCAGGGAAATGGCAAATCATGGAGAGACCTCAAGGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCTGGCAATATTGACCTAAGAGTTTATTCCATCACCATGGCAGTGGGGTCTGCCTTGCTGGCAGCATaGTGGGCTAGGGTCCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SAGNIDLRVYSITMAVGSALLAA*WARVLR Trigger: CCTGAGGACCCTAGCCCACAATGCTGCCAGCAAGGC...AGACCCCACTGCCATGGTGATGGAATAAACTCTTAGGTCAATATTGCCAGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR GCA 72 bp | TCTGGAGGTCTTTCCTGGCAGTGGCTTCCTCTCTGGTaGAAGAAGGCTAGGTGCTCAGAAAGAAAAGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SGGLSWQWLPLW*KKARCSERKVQ Trigger: CTGGACTTTTCTTTCTGAGCACCTAGCCTTCTTGCACCAGAGAGGAAGCCACTGCCAGGAAAGACCTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR CCA 72 bp | ACCTCTGGAGGTCTTTCCTGGCAGTGGCTTCCTCTCTaGTGCAAGAAGGCTAGGTGCTCAGAAAGAAAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: TSGGLSWQWLPL*CKKARCSERKV Trigger: GACTTTTCTTTCTGAGCACCTAGCCTTCTTGCACCAGAGAGGAAGCCACTGCCAGGAAAGACCTCCAGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTAATTTAGGGAGGGCAGTGGGGAGGAGCAATAAAAGCCAAACTCTGAGGCAACGAAAGCTGCTTTGCTaGGGACCCTTCCCACCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: SNLGRAVGRSNKSQTLRQRKLLC*GPFPPD Trigger: GTCAGGTGGGAAGGGTCCCAAGCAAAGCAGCTTTCG...TTGCCTCAGAGTTTGGCTTTTATTGCTCCTCCCCACTGCCCTCCCTAAATTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR CCA 72 bp | CCTTATTGGGCAACTGAGGCAGAATGGAGGGACACTTaGCCCTCTTCCTCACTTCTGCTAGGGAAATATCAG | + |
|
Preference number: 3 (lower is better) Translates to: PYWATEAEWRDT*PSSSLLLGKYQ Trigger: CTGATATTTCCCTAGCAGAAGTGAGGAAGAGGGCCAAGTGTCCCTCCATTCTGCCTCAGTTGCCCAATAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGCAGATACTTAAGACAGGTTCACTGTATTTACCAGTGTTTCTCAACCTGTGCCTTGCTGGCAGCATaGTGGGCTAGGGTCCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TSRYLRQVHCIYQCFSTCALLAA*WARVLR Trigger: CCTGAGGACCCTAGCCCACAATGCTGCCAGCAAGGC...ACAGGTTGAGAAACACTGGTAAATACAGTGAACCTGTCTTAAGTATCTGCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCCAAGGAATTCTGTGTGTGTGTGTGTGTGGTGGGAACACTATGGATAGTGAAAGAATGGAGGGACACTaGGCCCTCTTCCTCACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GQGILCVCVCGGNTMDSERMEGH*ALFLTS Trigger: AGAAGTGAGGAAGAGGGCCAAGTGTCCCTCCATTCT...TTCACTATCCATAGTGTTCCCACCACACACACACACACACAGAATTCCTTGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR TCA 72 bp | GTGTGTGTGTGTGGTGGGAACACTATGGATAGTGAATaGAGAATTTGGGGGCTTCAGAGGAGGCACTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: VCVCGGNTMDSE*RIWGLQRRHWE Trigger: TTCCCAGTGCCTCCTCTGAAGCCCCCAAATTCTTCATTCACTATCCATAGTGTTCCCACCACACACACACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR GCA 72 bp | CCTTCCTTGCTACAAACATCTGGTGCCTTCTTTGCTTaGCCTGTGATTTCTAAAACAGGTGTCCTTGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PSLLQTSGAFFA*PVISKTGVLGL Trigger: GAGGCCAAGGACACCTGTTTTAGAAATCACAGGGCAAGCAAAGAAGGCACCAGATGTTTGTAGCAAGGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CAA 90 bp | ACATACACACACACACACGATGTGTGTGTGTGTTACACATCTATGCAGGTAACAAGTGAGAACTTCTGCTaGTCTGGAAGTGCTCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TYTHTHDVCVCYTSMQVTSENFC*SGSALP Trigger: GGGAAGAGCACTTCCAGACAAGCAGAAGTTCTCACT...TGTTACCTGCATAGATGTGTAACACACACACACATCGTGTGTGTGTGTGTATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR CCA 72 bp | GAATTCTGTGTGTGTGTGTGTGTGGTGGGAACACTATaGATAGTGAATGAAGAATTTGGGGGCTTCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: EFCVCVCVVGTL*IVNEEFGGFRG Trigger: TCCTCTGAAGCCCCCAAATTCTTCATTCACTATCCATAGTGTTCCCACCACACACACACACACACAGAATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR CCA 72 bp | GAAGGAAGAAACAAAGCAAGGCTCTCAGAAAAGGCATaGGCTTTTCTAGTAGCTCCTATAGACTTCCACTTC | + |
|
Preference number: 3 (lower is better) Translates to: EGRNKARLSEKA*AFLVAPIDFHF Trigger: GAAGTGGAAGTCTATAGGAGCTACTAGAAAAGCCCATGCCTTTTCTGAGAGCCTTGCTTTGTTTCTTCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR TCA 72 bp | CTGCTTGTCTGGAAGTGCTCTTCCCACCTGCGAAGGTaGATTATGGATTTCATTCTTCAGGTGAAAGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: LLVWKCSSHLRR*IMDFILQVKEF Trigger: AAATTCTTTCACCTGAAGAATGAAATCCATAATTCACCTTCGCAGGTGGGAAGAGCACTTCCAGACAAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAAAACCTCACCAGCAGATACTTAAGACAGGTTCACTGTATTTACCAGTGTTTAGTGAGAACTTCTGCTaGTCTGGAAGTGCTCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: IKPHQQILKTGSLYLPVFSENFC*SGSALP Trigger: GGGAAGAGCACTTCCAGACAAGCAGAAGTTCTCACT...AAACACTGGTAAATACAGTGAACCTGTCTTAAGTATCTGCTGGTGAGGTTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR GCA 72 bp | ATGTTAAAGGGTTGCATTAGGAAAGTTGAGAAGCACTaGCTTAGAACTTTAGAGTTAGAACACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: MLKGCIRKVEKH*LRTLELEHTHT Trigger: TGTGTGTGTGTGTTCTAACTCTAAAGTTCTAAGGCAGTGCTTCTCAACTTTCCTAATGCAACCCTTTAACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAAAACCTCACCAGCAGATACTTAAGACAGGTTCACTGTATTTACCAGTGTTTGAAAATAATTTATGGTaGAGGGGGTCACCACAACAT | + |
|
Preference number: 3 (lower is better) Translates to: IKPHQQILKTGSLYLPVFENNLW*RGSPQH Trigger: ATGTTGTGGTGACCCCCTCAACCATAAATTATTTTC...AAACACTGGTAAATACAGTGAACCTGTCTTAAGTATCTGCTGGTGAGGTTTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGCAAGACCGAAAGCTGCTTTGCTTGGGACCCTTCCCACCTGACCACAGCCCGCTGGTCAGTGTGGTaGTTCTGCGTAGGTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AGKTESCFAWDPSHLTTARWSVW*FCVGFP Trigger: GGGAAAACCTACGCAGAATCACCACACTGACCAGCG...GGCTGTGGTCAGGTGGGAAGGGTCCCAAGCAAAGCAGCTTTCGGTCTTGCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR TCA 90 bp | TCTGAGGCAAGCTGGCAAGACCGAAAGCTGCTTTGCTTGGGACCCTTCCCACCTACATGGAGGCTGACCTaGGCAGCACGGCTCGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SEASWQDRKLLCLGPFPPTWRLT*AARLGT Trigger: TGTACCGAGCCGTGCTGCTCAGGTCAGCCTCCATGT...AGGTGGGAAGGGTCCCAAGCAAAGCAGCTTTCGGTCTTGCCAGCTTGCCTCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120411.9 |
||
| CDS-3UTR GCA 90 bp | AATAGCTGGCCTTTCAGGTGTGCCTTGCTGGCAGCATTGTGGGCTAGGGTCCTCTGGTTCAGTCTCTGCTaGCGCCTCAGCAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NSWPFRCALLAALWARVLWFSLC*RLSSSC Trigger: GCAGGAGCTGCTGAGGCGGCAGCAGAGACTGAACCA...GAGGACCCTAGCCCACAATGCTGCCAGCAAGGCACACCTGAAAGGCCAGCTATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR CCA 90 bp | AATAGCTGGCCTTTCAGGTGTGCCTTGCTGGCAGCATTGTGGGCTAGGGTCCTCGGCACTGCATCCGCTTaGCCTCTAGCTCCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NSWPFRCALLAALWARVLGTASA*PLAPPP Trigger: AGGAGGAGGAGCTAGAGGCCAAGCGGATGCAGTGCC...GAGGACCCTAGCCCACAATGCTGCCAGCAAGGCACACCTGAAAGGCCAGCTATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGGCTTCAGAGGAGGCACTGGGAACCTTCAGGCCAGGGAGCCAAGAGAGTTTCAGCCCGCTCCCTCTaGATCTCTGAGTACATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WGLQRRHWEPSGQGAKRVSARSL*ISEYME Trigger: CTCCATGTACTCAGAGATCCAGAGGGAGCGGGCTGA...AACTCTCTTGGCTCCCTGGCCTGAAGGTTCCCAGTGCCTCCTCTGAAGCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120411.9 |
||
| CDS-3UTR TCA 90 bp | ATATCAGTGAGTCTGATCGGGGATGGCACCTCTGGAGGTCTTTCCTGGCAGTGGTCAGCAGCTCCTGCTTaGAGGGGCACTGCATCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISVSLIGDGTSGGLSWQWSAAPA*RGTASA Trigger: AGCGGATGCAGTGCCCCTTCAAGCAGGAGCTGCTGA...CCACTGCCAGGAAAGACCTCCAGAGGTGCCATCCCCGATCAGACTCACTGATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR CCA 90 bp | GGCCAAGGAATTCTGTGTGTGTGTGTGTGTGGTGGGAACACTATGGATAGTGAACCTCGGCGGGCGCACTaGCCCACTCGCCCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GQGILCVCVCGGNTMDSEPRRAH*PTRPAS Trigger: AGAAGCTGGGCGAGTGGGCCAGTGCGCCCGCCGAGG...TTCACTATCCATAGTGTTCCCACCACACACACACACACACAGAATTCCTTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120411.9 |
||
| 3UTR CAA 72 bp | CAGCTTCCCAGGAATAGCTGGCCTTTCAGGTGTGCCTaGCTGGCAGCATTGTGGGCTAGGGTCCTCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLPRNSWPFRCA*LAALWARVLRF Trigger: GAACCTGAGGACCCTAGCCCACAATGCTGCCAGCAAGGCACACCTGAAAGGCCAGCTATTCCTGGGAAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGTGCCCCAGCAGGGAAATCTGTGCTCTGGGGAGTGAGAACTTCTGCTTGTCGCTGGTCAGTGTGGTaGTTCTGCGTAGGTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGAPAGKSVLWGVRTSACRWSVW*FCVGFP Trigger: GGGAAAACCTACGCAGAATCACCACACTGACCAGCG...ACAAGCAGAAGTTCTCACTCCCCAGAGCACAGATTTCCCTGCTGGGGCACCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGGTGGGAAGCAGCGAGAGAGACGGAATTGGGACTAACAGAGTCACAGAGTAGCTGGTTCAGTCTCTaGTGCCGCCTCAGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LWWEAARETELGLTESQSSWFSL*CRLSSS Trigger: GGAGCTGCTGAGGCGGCAGCAGAGACTGAACCAGCT...ACTCTGTGACTCTGTTAGTCCCAATTCCGTCTCTCTCGCTGCTTCCCACCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR CAA 72 bp | AATAGCTGGCCTTTCAGGTGTGCCTTGCTGGCAGCATaGTGGGCTAGGGTCCTCAGGTTCAGACTGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NSWPFRCALLAA*WARVLRFRLAG Trigger: TCCAGCCAGTCTGAACCTGAGGACCCTAGCCCACAATGCTGCCAGCAAGGCACACCTGAAAGGCCAGCTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR CAA 72 bp | CTGACCACAGCCTGCTGTCGCCTCCCATGCCCTTCCTaGCTACAAACATCTGGTGCCTTCTTTGCTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTTACCRLPCPS*LQTSGAFFACP Trigger: AGGGCAAGCAAAGAAGGCACCAGATGTTTGTAGCAAGGAAGGGCATGGGAGGCGACAGCAGGCTGTGGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR GCA 90 bp | AGAAATAGGCCTTATTGGGCAACTGAGGCAGAATGGAGGGACACTTGGCCCTCTGCTGCAGCTCAGGCTTaGTGTCCATACCCAAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RNRPYWATEAEWRDTWPSAAAQA*CPYPSP Trigger: GGGGCTTGGGTATGGACAGCAAGCCTGAGCTGCAGC...AGAGGGCCAAGTGTCCCTCCATTCTGCCTCAGTTGCCCAATAAGGCCTATTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR GCA 90 bp | ATATCAGTGAGTCTGATCGGGGATGGCACCTCTGGAGGTCTTTCCTGGCAGTGGTGCTCTAGAACTCGCTaGAGCTCAGGCTTGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISVSLIGDGTSGGLSWQWCSRTR*SSGLLS Trigger: GGACAGCAAGCCTGAGCTGCAGCGAGTTCTAGAGCA...CCACTGCCAGGAAAGACCTCCAGAGGTGCCATCCCCGATCAGACTCACTGATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTCCTCTCTGGTGCAAGAAGGCTAGGTGCTCAGAAAGAAAAGTCCAGAGACCGCCTCAGCAGCTCCTaGTTGAAGGGGCACTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: GFLSGARRLGAQKEKSRDRLSSS*LKGHCI Trigger: GATGCAGTGCCCCTTCAAGCAGGAGCTGCTGAGGCG...GTCTCTGGACTTTTCTTTCTGAGCACCTAGCCTTCTTGCACCAGAGAGGAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTCCTCTCTGGTGCAAGAAGGCTAGGTGCTCAGAAAGAAAAGTCCAGAGACAGCTGGTTCAGTCTCTaGTGCCGCCTCAGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GFLSGARRLGAQKEKSRDSWFSL*CRLSSS Trigger: GGAGCTGCTGAGGCGGCAGCAGAGACTGAACCAGCT...GTCTCTGGACTTTTCTTTCTGAGCACCTAGCCTTCTTGCACCAGAGAGGAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTCTCCAGCTTCCCAGGAATAGCTGGCCTTTCAGGTGTGCCTTGCTGGCCTCCTCCTTCTTTTTaGTCAGCTGATTCCTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: VCVSSFPGIAGLSGVPCWPPPSF*SADSCD Trigger: GTCGCAGGAATCAGCTGATCAAAAAGAAGGAGGAGG...CCAGCAAGGCACACCTGAAAGGCCAGCTATTCCTGGGAAGCTGGAGACACACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR TCA 90 bp | TCTGAGGCAAGCTGGCAAGACCGAAAGCTGCTTTGCTTGGGACCCTTCCCACCTTTCTTTTTGATCAGCTaGTTCCTGCGACGGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SEASWQDRKLLCLGPFPPFFLIS*FLRRCS Trigger: AGAGCACCGTCGCAGGAATCAGCTGATCAAAAAGAA...AGGTGGGAAGGGTCCCAAGCAAAGCAGCTTTCGGTCTTGCCAGCTTGCCTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR TCA 90 bp | CCACTTCAATTTCATTGGCCATACCTGGTCACATGCTCACCCAAATGTGCAGAGTCAGCAGCTCCTGCTTaGAGGGGCACTGCATCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLQFHWPYLVTCSPKCAESAAPA*RGTASA Trigger: AGCGGATGCAGTGCCCCTTCAAGCAGGAGCTGCTGA...CTCTGCACATTTGGGTGAGCATGTGACCAGGTATGGCCAATGAAATTGAAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| CDS-3UTR GCA 90 bp | AGTAATTTAGGGAGGGCAGTGGGGAGGAGCAATAAAAGCCAAACTCTGAGGCAACGCCTCAGCAGCTCCTaGTTGAAGGGGCACTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SNLGRAVGRSNKSQTLRQRLSSS*LKGHCI Trigger: GATGCAGTGCCCCTTCAAGCAGGAGCTGCTGAGGCG...TTGCCTCAGAGTTTGGCTTTTATTGCTCCTCCCCACTGCCCTCCCTAAATTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR CCA 90 bp | AGAAATAGGCCTTATTGGGCAACTGAGGCAGAATGGAGGGACACTTGGCCCTCTCCACTCTCTGTACTCTaGTCTGGCCATGAGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RNRPYWATEAEWRDTWPSPLSVL*SGHESL Trigger: GAGGGACTCATGGCCAGACCAGAGTACAGAGAGTGG...AGAGGGCCAAGTGTCCCTCCATTCTGCCTCAGTTGCCCAATAAGGCCTATTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR CCA 90 bp | CCACTTCAATTTCATTGGCCATACCTGGTCACATGCTCACCCAAATGTGCAGAGGGCACTGCATCCGCTTaGCCTCTAGCTCCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLQFHWPYLVTCSPKCAEGTASA*PLAPPP Trigger: AGGAGGAGGAGCTAGAGGCCAAGCGGATGCAGTGCC...CTCTGCACATTTGGGTGAGCATGTGACCAGGTATGGCCAATGAAATTGAAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| CDS-3UTR TCA 90 bp | GAGGAGGCACTGGGAACCTTCAGGCCAGGGAGCCAAGAGAGTTGGCTATTTTTAGGGTTTGATGAGCTCTaGGTTCCACTCTCTGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: EEALGTFRPGSQESWLFLGFDEL*VPLSVL Trigger: GAGTACAGAGAGTGGAACTCAGAGCTCATCAAACCC...TAAAAATAGCCAACTCTCTTGGCTCCCTGGCCTGAAGGTTCCCAGTGCCTCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGAGGCACTGGGAACCTTCAGGCCAGGGAGCCAAGAGAGTTGGCTATTTTTCCTCCTCCTTCTTTTTaGTCAGCTGATTCCTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: RGGTGNLQAREPRELAIFPPPSF*SADSCD Trigger: GTCGCAGGAATCAGCTGATCAAAAAGAAGGAGGAGG...AAAAATAGCCAACTCTCTTGGCTCCCTGGCCTGAAGGTTCCCAGTGCCTCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGGTGGGAACACTATGGATAGTGAATGAAGAATTTGGGGGCTTCAGATCAGCAGCTCCTGCTTaGAGGGGCACTGCATCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VCVVGTLWIVNEEFGGFRSAAPA*RGTASA Trigger: AGCGGATGCAGTGCCCCTTCAAGCAGGAGCTGCTGA...TCTGAAGCCCCCAAATTCTTCATTCACTATCCATAGTGTTCCCACCACACACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTGGTGGGAACACTATGGATAGTGAATGAAGAATTTGGGGGCTTCAGACGCCTCAGCAGCTCCTaGTTGAAGGGGCACTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: VCVVGTLWIVNEEFGGFRRLSSS*LKGHCI Trigger: GATGCAGTGCCCCTTCAAGCAGGAGCTGCTGAGGCG...TCTGAAGCCCCCAAATTCTTCATTCACTATCCATAGTGTTCCCACCACACACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR TCA 90 bp | GGCCAAGGAATTCTGTGTGTGTGTGTGTGTGGTGGGAACACTATGGATAGTGAACGCTGGTCAGTGTGGTaGTTCTGCGTAGGTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GQGILCVCVCGGNTMDSERWSVW*FCVGFP Trigger: GGGAAAACCTACGCAGAATCACCACACTGACCAGCG...TTCACTATCCATAGTGTTCCCACCACACACACACACACACAGAATTCCTTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR GCA 90 bp | CTAATGGTCCAGGCATTGCATCCTCAATCAAGAAGGAAGAAACAAAGCAAGGCTGCTGCAGCTCAGGCTTaGTGTCCATACCCAAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LMVQALHPQSRRKKQSKAAAAQA*CPYPSP Trigger: GGGGCTTGGGTATGGACAGCAAGCCTGAGCTGCAGC...AGCCTTGCTTTGTTTCTTCCTTCTTGATTGAGGATGCAATGCCTGGACCATTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| CDS-3UTR GCA 90 bp | CTAATGGTCCAGGCATTGCATCCTCAATCAAGAAGGAAGAAACAAAGCAAGGCTTGGTTCAGTCTCTGCTaGCGCCTCAGCAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LMVQALHPQSRRKKQSKAWFSLC*RLSSSC Trigger: GCAGGAGCTGCTGAGGCGGCAGCAGAGACTGAACCA...AGCCTTGCTTTGTTTCTTCCTTCTTGATTGAGGATGCAATGCCTGGACCATTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| CDS-3UTR CCA 90 bp | AGTAATTTAGGGAGGGCAGTGGGGAGGAGCAATAAAAGCCAAACTCTGAGGCAACCACTCTCTGTACTCTaGTCTGGCCATGAGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SNLGRAVGRSNKSQTLRQPLSVL*SGHESL Trigger: GAGGGACTCATGGCCAGACCAGAGTACAGAGAGTGG...TTGCCTCAGAGTTTGGCTTTTATTGCTCCTCCCCACTGCCCTCCCTAAATTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR CCA 90 bp | CCACTTCAATTTCATTGGCCATACCTGGTCACATGCTCACCCAAATGTGCAGAGCCACTCTCTGTACTCTaGTCTGGCCATGAGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLQFHWPYLVTCSPKCAEPLSVL*SGHESL Trigger: GAGGGACTCATGGCCAGACCAGAGTACAGAGAGTGG...CTCTGCACATTTGGGTGAGCATGTGACCAGGTATGGCCAATGAAATTGAAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCTCTCTGGTGCAAGAAGGCTAGGTGCTCAGAAAGAAAAGTCCAGAGACCTTTCTTTTTGATCAGCTaGTTCCTGCGACGGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLWCKKARCSERKVQRPFFLIS*FLRRCS Trigger: AGAGCACCGTCGCAGGAATCAGCTGATCAAAAAGAA...AGGTCTCTGGACTTTTCTTTCTGAGCACCTAGCCTTCTTGCACCAGAGAGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR GCA 90 bp | TTTTTATTTACAAGGGTTCTGGAGATGGAGAGCTGTTGGCACTTGCTTGGTCAGTGCTCTAGAACTCGCTaGAGCTCAGGCTTGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLFTRVLEMESCWHLLGQCSRTR*SSGLLS Trigger: GGACAGCAAGCCTGAGCTGCAGCGAGTTCTAGAGCA...CTGACCAAGCAAGTGCCAACAGCTCTCCATCTCCAGAACCCTTGTAAATAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGCAGATACTTAAGACAGGTTCACTGTATTTACCAGTGTTTCTCAACCTGTAGCTGGTTCAGTCTCTaGTGCCGCCTCAGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSRYLRQVHCIYQCFSTCSWFSL*CRLSSS Trigger: GGAGCTGCTGAGGCGGCAGCAGAGACTGAACCAGCT...ACAGGTTGAGAAACACTGGTAAATACAGTGAACCTGTCTTAAGTATCTGCTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGGTGGGAACACTATGGATAGTGAATGAAGAATTTGGGGGCTTCAGAGGGTTTGATGAGCTCTaGGTTCCACTCTCTGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: VCVVGTLWIVNEEFGGFRGFDEL*VPLSVL Trigger: GAGTACAGAGAGTGGAACTCAGAGCTCATCAAACCC...TCTGAAGCCCCCAAATTCTTCATTCACTATCCATAGTGTTCCCACCACACACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR TCA 90 bp | GGCCAAGGAATTCTGTGTGTGTGTGTGTGTGGTGGGAACACTATGGATAGTGAATTCTTTTTGATCAGCTaGTTCCTGCGACGGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GQGILCVCVCGGNTMDSEFFLIS*FLRRCS Trigger: AGAGCACCGTCGCAGGAATCAGCTGATCAAAAAGAA...TTCACTATCCATAGTGTTCCCACCACACACACACACACACAGAATTCCTTGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR GCA 90 bp | TTCCATAGGAAATCATTGTATAGTTGCTTTCCAAAAAGCTGTAGAAAGCTAAGGGCTGCAGCTCAGGCTTaGTGTCCATACCCAAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FHRKSLYSCFPKSCRKLRAAAQA*CPYPSP Trigger: GGGGCTTGGGTATGGACAGCAAGCCTGAGCTGCAGC...CCTTAGCTTTCTACAGCTTTTTGGAAAGCAACTATACAATGATTTCCTATGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR GCA 90 bp | TTCCATAGGAAATCATTGTATAGTTGCTTTCCAAAAAGCTGTAGAAAGCTAAGGTGGTTCAGTCTCTGCTaGCGCCTCAGCAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FHRKSLYSCFPKSCRKLRWFSLC*RLSSSC Trigger: GCAGGAGCTGCTGAGGCGGCAGCAGAGACTGAACCA...CCTTAGCTTTCTACAGCTTTTTGGAAAGCAACTATACAATGATTTCCTATGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR TCA 90 bp | TTCCATAGGAAATCATTGTATAGTTGCTTTCCAAAAAGCTGTAGAAAGCTAAGGCCTCCTCCTTCTTTTTaGTCAGCTGATTCCTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: FHRKSLYSCFPKSCRKLRPPPSF*SADSCD Trigger: GTCGCAGGAATCAGCTGATCAAAAAGAAGGAGGAGG...CCTTAGCTTTCTACAGCTTTTTGGAAAGCAACTATACAATGATTTCCTATGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| 3UTR CAA 72 bp | TCTTTAGGTAAAACATGGTTGCTAATGGTCCAGGCATaGCATCCTCAATCAAGAAGGAAGAAACAAAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLGKTWLLMVQA*HPQSRRKKQSK Trigger: CTTGCTTTGTTTCTTCCTTCTTGATTGAGGATGCAATGCCTGGACCATTAGCAACCATGTTTTACCTAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR CAA 72 bp | ATTTTTATTTACAAGGGTTCTGGAGATGGAGAGCTGTaGGCACTTGCTTGGTCAGATGATCATAGGGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: IFIYKGSGDGEL*ALAWSDDHRVY Trigger: ATAAACCCTATGATCATCTGACCAAGCAAGTGCCAACAGCTCTCCATCTCCAGAACCCTTGTAAATAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
||
| 3UTR CAA 72 bp | CACCATGGCAGTGGGGTCTTCAAAATAGCATATATATaGTTCCATAGGAAATCATTGTATAGTTGCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HHGSGVFKIAYI*FHRKSLYSCFP Trigger: TGGAAAGCAACTATACAATGATTTCCTATGGAACAATATATATGCTATTTTGAAGACCCCACTGCCATGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCATTGTGGGCTAGGGTCCTCAGGTTCAGACTGGCTGGAGGAGGGCTGGGCGGGCACTGCATCCGCTaGGCCTCTAGCTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AALWARVLRFRLAGGGLGGHCIR*ASSSSS Trigger: GGAGGAGGAGCTAGAGGCCAAGCGGATGCAGTGCCC...GCCCAGCCCTCCTCCAGCCAGTCTGAACCTGAGGACCCTAGCCCACAATGCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR CAA 90 bp | CTAGGGTCCTCAGGTTCAGACTGGCTGGAGGAGGGCTGGGCCAGAGTAAGTGGCCGCTGCAGCTCAGGCTaGCTGTCCATACCCAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGSSGSDWLEEGWARVSGRCSSG*LSIPKP Trigger: GGGCTTGGGTATGGACAGCAAGCCTGAGCTGCAGCG...GCCACTTACTCTGGCCCAGCCCTCCTCCAGCCAGTCTGAACCTGAGGACCCTAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGGTTCAGACTGGCTGGAGGAGGGCTGGGCCAGAGTAAGTGGCAGGAGCTGCGCTGCAGCTCAGGCTaGCTGTCCATACCCAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LRFRLAGGGLGQSKWQELRCSSG*LSIPKP Trigger: GGGCTTGGGTATGGACAGCAAGCCTGAGCTGCAGCG...CAGCTCCTGCCACTTACTCTGGCCCAGCCCTCCTCCAGCCAGTCTGAACCTGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS CCA 90 bp | TACTCTGGTCTGGCCATGAGTCCCTCGATGTCAGCCCGCTCCCTCTaGATCTCTGAGTACATGGAGGCTGACCTGAGCAGCACGGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: YSGLAMSPSMSARSL*ISEYMEADLSSTAR Trigger: CCGAGCCGTGCTGCTCAGGTCAGCCTCCATGTACTCAGAGATCCAGAGGGAGCGGGCTGACATCGAGGGACTCATGGCCAGACCAGAGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120411.9 |
||
| CDS-3UTR CAA 90 bp | TCTGAGGCAAGCTGGCAAGACCGAAAGCTGCTTTGCTTGGGACCCTTCCCACCTCGCTGCAGCTCAGGCTaGCTGTCCATACCCAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SEASWQDRKLLCLGPFPPRCSSG*LSIPKP Trigger: GGGCTTGGGTATGGACAGCAAGCCTGAGCTGCAGCG...AGGTGGGAAGGGTCCCAAGCAAAGCAGCTTTCGGTCTTGCCAGCTTGCCTCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR CAA 90 bp | ATATCAGTGAGTCTGATCGGGGATGGCACCTCTGGAGGTCTTTCCTGGCAGTGGGGGCACTGCATCCGCTaGGCCTCTAGCTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ISVSLIGDGTSGGLSWQWGHCIR*ASSSSS Trigger: GGAGGAGGAGCTAGAGGCCAAGCGGATGCAGTGCCC...CCACTGCCAGGAAAGACCTCCAGAGGTGCCATCCCCGATCAGACTCACTGATAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR CAA 90 bp | CTAGGGTCCTCAGGTTCAGACTGGCTGGAGGAGGGCTGGGCCAGAGTAAGTGGCAGGTTTTCCCGGACTTaGATGAACTCAGGGGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LGSSGSDWLEEGWARVSGRFSRT*MNSGAW Trigger: CCACGCCCCTGAGTTCATCAAAGTCCGGGAAAACCT...GCCACTTACTCTGGCCCAGCCCTCCTCCAGCCAGTCTGAACCTGAGGACCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCATTGTGGGCTAGGGTCCTCAGGTTCAGACTGGCTGGAGGAGGGCTGGGCAGCAGCTTCTTGGGTTaGATGAGCTCTGAGTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AALWARVLRFRLAGGGLGSSFLG*MSSEFH Trigger: GTGGAACTCAGAGCTCATCAAACCCAAGAAGCTGCT...GCCCAGCCCTCCTCCAGCCAGTCTGAACCTGAGGACCCTAGCCCACAATGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS-3UTR CAA 90 bp | CTAGGGTCCTCAGGTTCAGACTGGCTGGAGGAGGGCTGGGCCAGAGTAAGTGGCAGCAGCTTCTTGGGTTaGATGAGCTCTGAGTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGSSGSDWLEEGWARVSGSSFLG*MSSEFH Trigger: GTGGAACTCAGAGCTCATCAAACCCAAGAAGCTGCT...GCCACTTACTCTGGCCCAGCCCTCCTCCAGCCAGTCTGAACCTGAGGACCCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
||
| CDS TCA 90 bp | CCCAAGCCCCTTTTGTGGTTCATAAGCAGCTCACGGTGCAGCTCCTaGTGGCTCCGAGAAGCCTTCACAGGGTTCAGCAGCTTCTTGGGT | + |
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Preference number: 5 (lower is better) Translates to: PKPLLWFISSSRCSS*WLREAFTGFSSFLG Trigger: ACCCAAGAAGCTGCTGAACCCTGTGAAGGCTTCTCGGAGCCATCAGGAGCTGCACCGTGAGCTGCTTATGAACCACAAAAGGGGCTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 ENSMUST00000137133.2 |
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| CDS-3UTR CAA 90 bp | AGAAATAGGCCTTATTGGGCAACTGAGGCAGAATGGAGGGACACTTGGCCCTCTAGGTTTTCCCGGACTTaGATGAACTCAGGGGCGTGG | + |
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Preference number: 5 (lower is better) Translates to: RNRPYWATEAEWRDTWPSRFSRT*MNSGAW Trigger: CCACGCCCCTGAGTTCATCAAAGTCCGGGAAAACCT...AGAGGGCCAAGTGTCCCTCCATTCTGCCTCAGTTGCCCAATAAGGCCTATTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| CDS TCA 90 bp | AGAAGCCTTCACAGGGTTCAGCAGCTTCTTGGGTTTGATGAGCTCTaGGTTCCACTCTCTGTACTCTGGTCTGGCCATGAGTCCCTCGAT | + |
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Preference number: 5 (lower is better) Translates to: RSLHRVQQLLGFDEL*VPLSVLWSGHESLD Trigger: ATCGAGGGACTCATGGCCAGACCAGAGTACAGAGAGTGGAACTCAGAGCTCATCAAACCCAAGAAGCTGCTGAACCCTGTGAAGGCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 ENSMUST00000137133.2 |
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| CDS-3UTR CAA 90 bp | CTCTGGTGGGAAGCAGCGAGAGAGACGGAATTGGGACTAACAGAGTCACAGAGTAGCAGCTTCTTGGGTTaGATGAGCTCTGAGTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: LWWEAARETELGLTESQSSSFLG*MSSEFH Trigger: GTGGAACTCAGAGCTCATCAAACCCAAGAAGCTGCT...ACTCTGTGACTCTGTTAGTCCCAATTCCGTCTCTCTCGCTGCTTCCCACCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036070.15 ENSMUST00000121887.8 |
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| CDS-3UTR CAA 90 bp | GAGGAGGCACTGGGAACCTTCAGGCCAGGGAGCCAAGAGAGTTGGCTATTTTTAATACCCAAGCCCCTTTaGTGGTTCATAAGCAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: EEALGTFRPGSQESWLFLIPKPL*WFISSS Trigger: TGAGCTGCTTATGAACCACAAAAGGGGCTTGGGTAT...TAAAAATAGCCAACTCTCTTGGCTCCCTGGCCTGAAGGTTCCCAGTGCCTCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGGTGGGAACACTATGGATAGTGAATGAAGAATTTGGGGGCTTCAGAAGGTTTTCCCGGACTTaGATGAACTCAGGGGCGTGG | + |
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Preference number: 5 (lower is better) Translates to: VCVVGTLWIVNEEFGGFRRFSRT*MNSGAW Trigger: CCACGCCCCTGAGTTCATCAAAGTCCGGGAAAACCT...TCTGAAGCCCCCAAATTCTTCATTCACTATCCATAGTGTTCCCACCACACACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| CDS-3UTR CAA 90 bp | TTCCATAGGAAATCATTGTATAGTTGCTTTCCAAAAAGCTGTAGAAAGCTAAGGATACCCAAGCCCCTTTaGTGGTTCATAAGCAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: FHRKSLYSCFPKSCRKLRIPKPL*WFISSS Trigger: TGAGCTGCTTATGAACCACAAAAGGGGCTTGGGTAT...CCTTAGCTTTCTACAGCTTTTTGGAAAGCAACTATACAATGATTTCCTATGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| CDS CCA 72 bp | CTGGCCATGAGTCCCTCGATGTCAGCCCGCTCCCTCTaGATCTCTGAGTACATGGAGGCTGACCTGAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LAMSPSMSARSL*ISEYMEADLSS Trigger: GCTGCTCAGGTCAGCCTCCATGTACTCAGAGATCCAGAGGGAGCGGGCTGACATCGAGGGACTCATGGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120411.9 |
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| CDS TCA 72 bp | GCTCTGAGTTCCACTCTCTGTACTCTGGTCTGGCCATaGGTCCCTCGATGTCAGCCCGCTCCCTCTGGATCT | + |
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Preference number: 6 (lower is better) Translates to: ALSSTLCTLVWP*VPRCQPAPSGS Trigger: AGATCCAGAGGGAGCGGGCTGACATCGAGGGACTCATGGCCAGACCAGAGTACAGAGAGTGGAACTCAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 ENSMUST00000137133.2 |
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| CDS CCA 72 bp | TTTGATGAACTCAGGGGCGTGGTCCTCGTCTCTCTGTaGTGGGTTTTCCAGCTGGTTCAGTCTCTGCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: FDELRGVVLVSL*WVFQLVQSLLP Trigger: CGGCAGCAGAGACTGAACCAGCTGGAAAACCCACCACAGAGAGACGAGGACCACGCCCCTGAGTTCATCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| CDS CAA 90 bp | TCCTCGCTGGTCAGTGTGGTGATTCTGCGTAGGTTTTCCCGGACTTaGATGAACTCAGGGGCGTGGTCCTCGTCTCTCTGTGGTGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: SSLVSVVILRRFSRT*MNSGAWSSSLCGGF Trigger: AAACCCACCACAGAGAGACGAGGACCACGCCCCTGAGTTCATCAAAGTCCGGGAAAACCTACGCAGAATCACCACACTGACCAGCGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| CDS TCA 72 bp | CTTTTGTGGTTCATAAGCAGCTCACGGTGCAGCTCCTaGTGGCTCCGAGAAGCCTTCACAGGGTTCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LLWFISSSRCSS*WLREAFTGFSS Trigger: GCTGCTGAACCCTGTGAAGGCTTCTCGGAGCCATCAGGAGCTGCACCGTGAGCTGCTTATGAACCACAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 ENSMUST00000137133.2 |
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| CDS CAA 72 bp | CTGCGACGGTGCTCTAGAACTCGCTGCAGCTCAGGCTaGCTGTCCATACCCAAGCCCCTTTTGTGGTTCATA | + |
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Preference number: 6 (lower is better) Translates to: LRRCSRTRCSSG*LSIPKPLLWFI Trigger: TATGAACCACAAAAGGGGCTTGGGTATGGACAGCAAGCCTGAGCTGCAGCGAGTTCTAGAGCACCGTCGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 ENSMUST00000137133.2 |
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| CDS CAA 72 bp | GTCAGTGTGGTGATTCTGCGTAGGTTTTCCCGGACTTaGATGAACTCAGGGGCGTGGTCCTCGTCTCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: VSVVILRRFSRT*MNSGAWSSSLC Trigger: ACAGAGAGACGAGGACCACGCCCCTGAGTTCATCAAAGTCCGGGAAAACCTACGCAGAATCACCACACTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 |
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| CDS CAA 72 bp | CGAGAAGCCTTCACAGGGTTCAGCAGCTTCTTGGGTTaGATGAGCTCTGAGTTCCACTCTCTGTACTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: REAFTGFSSFLG*MSSEFHSLYSG Trigger: ACCAGAGTACAGAGAGTGGAACTCAGAGCTCATCAAACCCAAGAAGCTGCTGAACCCTGTGAAGGCTTCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036070.15 ENSMUST00000120411.9 ENSMUST00000121887.8 ENSMUST00000137133.2 |
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