Pregenerated sensors for FAM102A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039157Ensembl transcript IDs: ENSMUST00000048375.6
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCCAGGGAAAGCACACCCCTTGCCCAGGAGGGCTGAGGCTCGTCTaGCAGGAAGCCAGCTCCAGTTCACCCAGTCACAGGCCACCTGGC | + |
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Preference number: 1 (lower is better) Translates to: PQGKHTPCPGGLRLV*QEASSSSPSHRPPG Trigger: GCCAGGTGGCCTGTGACTGGGTGAACTGGAGCTGGCTTCCTGCCAGACGAGCCTCAGCCCTCCTGGGCAAGGGGTGTGCTTTCCCTGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR CCA 90 bp | GTGGCAGGGTTCTGGGGTGGCCCAGCTCGTGAAGGGCAGGGACAATaGAGCAAGTGCCCCGTCAGCCTGGCTGAAGCTGCTGCTCCTGAA | + |
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Preference number: 1 (lower is better) Translates to: VAGFWGGPAREGQGQ*SKCPVSLAEAAAPE Trigger: TTCAGGAGCAGCAGCTTCAGCCAGGCTGACGGGGCACTTGCTCCATTGTCCCTGCCCTTCACGAGCTGGGCCACCCCAGAACCCTGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR CCA 90 bp | CACAGCAGACAGCACCCAGGAGGTCTGGAGAAGGGCAAGGGCCGGTaGCTGTGCTGGGGACAAGCATGTGCAAAGTGCAGGCTGCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: HSRQHPGGLEKGKGR*LCWGQACAKCRLQG Trigger: GCCCTGCAGCCTGCACTTTGCACATGCTTGTCCCCAGCACAGCCACCGGCCCTTGCCCTTCTCCAGACCTCCTGGGTGCTGTCTGCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR TCA 90 bp | GGCCACCTGGCTGACTCTCTAGCCTGGAACCCAGCCCAGGCCGGCTaGCATGAGAGCAGGGGAAAAGGCCTTTGCTTACCCAGCACGGCT | + |
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Preference number: 1 (lower is better) Translates to: GHLADSLAWNPAQAG*HESRGKGLCLPSTA Trigger: AGCCGTGCTGGGTAAGCAAAGGCCTTTTCCCCTGCTCTCATGTCAGCCGGCCTGGGCTGGGTTCCAGGCTAGAGAGTCAGCCAGGTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR CCA 90 bp | TGGGGGATGGAGGGATGGGGCAGGCCACAAGCACCCAACATGGAATaGCTGTGTCCTTTGCTGGGCCCAGGTCCTCTCCAGTCAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: WGMEGWGRPQAPNME*LCPLLGPGPLQSGQ Trigger: CTGCCCTGACTGGAGAGGACCTGGGCCCAGCAAAGGACACAGCCATTCCATGTTGGGTGCTTGTGGCCTGCCCCATCCCTCCATCCCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR CCA 90 bp | GGTCGTGGGGGATGGAGGGATGGGGCAGGCCACAAGCACCCAACATaGAATGGCTGTGTCCTTTGCTGGGCCCAGGTCCTCTCCAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: GRGGWRDGAGHKHPT*NGCVLCWAQVLSSQ Trigger: CTGACTGGAGAGGACCTGGGCCCAGCAAAGGACACAGCCATTCCATGTTGGGTGCTTGTGGCCTGCCCCATCCCTCCATCCCCCACGACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR GCA 90 bp | AGATGCAATGCAGAGCAGATCCTCCAGGAATGCCACGGGCCTGGGTaGCAGAGATGGCAGGACCCTTCTTCAGCCGGACTCCTGGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: RCNAEQILQECHGPG*QRWQDPSSAGLLGP Trigger: GGGACCCAGGAGTCCGGCTGAAGAAGGGTCCTGCCATCTCTGGCACCCAGGCCCGTGGCATTCCTGGAGGATCTGCTCTGCATTGCATCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR CCA 90 bp | CCAGTGCCTGGAAGCAGAGGATGTGGCAGCTCTCGTCTACTGGAGTaGCCATCCAGTCCCAGACCTTGGCTTGAGTTAGGCAGGGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: PVPGSRGCGSSRLLE*PSSPRPWLELGRGS Trigger: AGAGCCCCTGCCTAACTCAAGCCAAGGTCTGGGACTGGATGGCCACTCCAGTAGACGAGAGCTGCCACATCCTCTGCTTCCAGGCACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR GCA 90 bp | AGTAAGAGGAGGCACAGATGCAATGCAGAGCAGATCCTCCAGGAATaGCACGGGCCTGGGTGCCAGAGATGGCAGGACCCTTCTTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: SKRRHRCNAEQILQE*HGPGCQRWQDPSSA Trigger: GGCTGAAGAAGGGTCCTGCCATCTCTGGCACCCAGGCCCGTGGCATTCCTGGAGGATCTGCTCTGCATTGCATCTGTGCCTCCTCTTACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR CCA 90 bp | CAGTGGCACCCAGGACCAGTGGTTCCAGGGTGGATGGGAGGAAAATaGAATGACGCTTTGGGGGCCAGTGTGGCTAGAGTAAGAGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: QWHPGPVVPGWMGGK*NDALGASVARVRGG Trigger: GCCTCCTCTTACTCTAGCCACACTGGCCCCCAAAGCGTCATTCCATTTTCCTCCCATCCACCCTGGAACCACTGGTCCTGGGTGCCACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR CCA 90 bp | AAAGACAGTGAAGCAGTAAGCAGAGGGTCACAGGTGGCAGGGTTCTaGGGTGGCCCAGCTCGTGAAGGGCAGGGACAATGGAGCAAGTGC | + |
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Preference number: 1 (lower is better) Translates to: KDSEAVSRGSQVAGF*GGPAREGQGQWSKC Trigger: GCACTTGCTCCATTGTCCCTGCCCTTCACGAGCTGGGCCACCCCAGAACCCTGCCACCTGTGACCCTCTGCTTACTGCTTCACTGTCTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR TCA 90 bp | GGAGGACAGTTAAGGAGGTGGGGTCTCAATCCAGAGTGTGGGGTTTaGGGTCTTAGCTCCCAGGAGAGAGCTGCCTGCAGGTCTCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: GGQLRRWGLNPECGV*GLSSQERAACRSPQ Trigger: CTGAGGAGACCTGCAGGCAGCTCTCTCCTGGGAGCTAAGACCTCAAACCCCACACTCTGGATTGAGACCCCACCTCCTTAACTGTCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR TCA 90 bp | CAGAGTCCCTTAAAGTGCCAGGCACCTGCTGGGCAGGATGGAATCTaGGCTGCCGGAACCTTCTCTAGCCATGTTCTGCCTTGCCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: QSPLKCQAPAGQDGI*AAGTFSSHVLPCLG Trigger: GCCAAGGCAAGGCAGAACATGGCTAGAGAAGGTTCCGGCAGCTCAGATTCCATCCTGCCCAGCAGGTGCCTGGCACTTTAAGGGACTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR CCA 90 bp | GGAGGACAATATTCACAGTGGCACCCAGGACCAGTGGTTCCAGGGTaGATGGGAGGAAAATGGAATGACGCTTTGGGGGCCAGTGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: GGQYSQWHPGPVVPG*MGGKWNDALGASVA Trigger: AGCCACACTGGCCCCCAAAGCGTCATTCCATTTTCCTCCCATCCACCCTGGAACCACTGGTCCTGGGTGCCACTGTGAATATTGTCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR CCA 90 bp | GACAATATTCACAGTGGCACCCAGGACCAGTGGTTCCAGGGTGGATaGGAGGAAAATGGAATGACGCTTTGGGGGCCAGTGTGGCTAGAG | + |
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Preference number: 1 (lower is better) Translates to: DNIHSGTQDQWFQGG*EENGMTLWGPVWLE Trigger: CTCTAGCCACACTGGCCCCCAAAGCGTCATTCCATTTTCCTCCCATCCACCCTGGAACCACTGGTCCTGGGTGCCACTGTGAATATTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR CCA 90 bp | CACCCGTGGGGATCACTGAGCGCAGGAGGAAAGGCTCTTAGCCTCTaGCTGCCACCAGTGTTCATTTGGTTGTGGTCATGTTTTCAGCTA | + |
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Preference number: 1 (lower is better) Translates to: HPWGSLSAGGKALSL*LPPVFIWLWSCFQL Trigger: TAGCTGAAAACATGACCACAACCAAATGAACACTGGTGGCAGCCAGAGGCTAAGAGCCTTTCCTCCTGCGCTCAGTGATCCCCACGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR CCA 90 bp | TTGGTTGTGGTCATGTTTTCAGCTAAGTTATCCTGGCCCAGTGCCTaGAAGCAGAGGATGTGGCAGCTCTCGTCTACTGGAGTGGCCATC | + |
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Preference number: 1 (lower is better) Translates to: LVVVMFSAKLSWPSA*KQRMWQLSSTGVAI Trigger: GATGGCCACTCCAGTAGACGAGAGCTGCCACATCCTCTGCTTCCAGGCACTGGGCCAGGATAACTTAGCTGAAAACATGACCACAACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR CCA 90 bp | ACCAGTGTTCATTTGGTTGTGGTCATGTTTTCAGCTAAGTTATCCTaGCCCAGTGCCTGGAAGCAGAGGATGTGGCAGCTCTCGTCTACT | + |
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Preference number: 1 (lower is better) Translates to: TSVHLVVVMFSAKLS*PSAWKQRMWQLSST Trigger: AGTAGACGAGAGCTGCCACATCCTCTGCTTCCAGGCACTGGGCCAGGATAACTTAGCTGAAAACATGACCACAACCAAATGAACACTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR TCA 90 bp | GCTTGGTTTGGAGCCCTGGAATTTAGAACTAGACCAAAACAATGCTaGCTGGGGAAGGTAGTAGACAAGCACACTAGGGCTCTGTCCATC | + |
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Preference number: 1 (lower is better) Translates to: AWFGALEFRTRPKQC*LGKVVDKHTRALSI Trigger: GATGGACAGAGCCCTAGTGTGCTTGTCTACTACCTTCCCCAGTCAGCATTGTTTTGGTCTAGTTCTAAATTCCAGGGCTCCAAACCAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR GCA 90 bp | GGTCACAGGTGGCAGGGTTCTGGGGTGGCCCAGCTCGTGAAGGGCAGGGACAATTGCCACGGGCCTGGGTaGCAGAGATGGCAGGACCCT | + |
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Preference number: 2 (lower is better) Translates to: GHRWQGSGVAQLVKGRDNCHGPG*QRWQDP Trigger: AGGGTCCTGCCATCTCTGGCACCCAGGCCCGTGGCA...ATTGTCCCTGCCCTTCACGAGCTGGGCCACCCCAGAACCCTGCCACCTGTGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR CCA 90 bp | CACGGCTGGGCCTCGTCCTTCCTTTCCTGCAGGAAGGCCAGCTGCTCAGGACCCAGTGCCCCGTCAGCCTaGCTGAAGCTGCTGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: HGWASSFLSCRKASCSGPSAPSA*LKLLLL Trigger: CAGGAGCAGCAGCTTCAGCCAGGCTGACGGGGCACT...GGGTCCTGAGCAGCTGGCCTTCCTGCAGGAAAGGAAGGACGAGGCCCAGCCGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR CCA 90 bp | TTGCTTACCCAGCACGGCTGGGCCTCGTCCTTCCTTTCCTGCAGGAAGGCCAGCTGGGGGATGGAGGGATaGGGCAGGCCACAAGCACCC | + |
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Preference number: 2 (lower is better) Translates to: LLTQHGWASSFLSCRKASWGMEG*GRPQAP Trigger: GGGTGCTTGTGGCCTGCCCCATCCCTCCATCCCCCA...GCTGGCCTTCCTGCAGGAAAGGAAGGACGAGGCCCAGCCGTGCTGGGTAAGCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR GCA 90 bp | CACGGCTGGGCCTCGTCCTTCCTTTCCTGCAGGAAGGCCAGCTGCTCAGGACCCCTGGGGACAAGCATGTaGAAAGTGCAGGCTGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: HGWASSFLSCRKASCSGPLGTSM*KVQAAG Trigger: CCCTGCAGCCTGCACTTTGCACATGCTTGTCCCCAG...GGGTCCTGAGCAGCTGGCCTTCCTGCAGGAAAGGAAGGACGAGGCCCAGCCGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR CCA 90 bp | GGTCACAGGTGGCAGGGTTCTGGGGTGGCCCAGCTCGTGAAGGGCAGGGACAATCCTGGGTGCCAGAGATaGCAGGACCCTTCTTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: GHRWQGSGVAQLVKGRDNPGCQR*QDPSSA Trigger: GGCTGAAGAAGGGTCCTGCCATCTCTGGCACCCAGG...ATTGTCCCTGCCCTTCACGAGCTGGGCCACCCCAGAACCCTGCCACCTGTGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR CCA 90 bp | GGGGAAAAGGCCTTTGCTTACCCAGCACGGCTGGGCCTCGTCCTTCCTTTCCTGGGCACCCAGGACCAGTaGTTCCAGGGTGGATGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GEKAFAYPARLGLVLPFLGTQDQ*FQGGWE Trigger: CTCCCATCCACCCTGGAACCACTGGTCCTGGGTGCC...CAGGAAAGGAAGGACGAGGCCCAGCCGTGCTGGGTAAGCAAAGGCCTTTTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR CCA 90 bp | GGGTCACAGGTGGCAGGGTTCTGGGGTGGCCCAGCTCGTGAAGGGCAGGGACAATGGATGGGAGGAAAATaGAATGACGCTTTGGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: GSQVAGFWGGPAREGQGQWMGGK*NDALGA Trigger: GGCCCCCAAAGCGTCATTCCATTTTCCTCCCATCCA...TTGTCCCTGCCCTTCACGAGCTGGGCCACCCCAGAACCCTGCCACCTGTGACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR CCA 90 bp | TTGCTTACCCAGCACGGCTGGGCCTCGTCCTTCCTTTCCTGCAGGAAGGCCAGCCTCAGGACCCAGCCCTaGGCAGATGGAACCATGATG | + |
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Preference number: 2 (lower is better) Translates to: LLTQHGWASSFLSCRKASLRTQP*ADGTMM Trigger: CATCATGGTTCCATCTGCCCAGGGCTGGGTCCTGAG...GCTGGCCTTCCTGCAGGAAAGGAAGGACGAGGCCCAGCCGTGCTGGGTAAGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR CCA 90 bp | TTGCTTACCCAGCACGGCTGGGCCTCGTCCTTCCTTTCCTGCAGGAAGGCCAGCGCACCCAACATGGAATaGCTGTGTCCTTTGCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LLTQHGWASSFLSCRKASAPNME*LCPLLG Trigger: GCCCAGCAAAGGACACAGCCATTCCATGTTGGGTGC...GCTGGCCTTCCTGCAGGAAAGGAAGGACGAGGCCCAGCCGTGCTGGGTAAGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR CCA 90 bp | CTGCCAGAGTCCCTTAAAGTGCCAGGCACCTGCTGGGCAGGATGGAATCTGAGCCCAGCCCTGGGCAGATaGAACCATGATGCTCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LPESLKVPGTCWAGWNLSPALGR*NHDAQA Trigger: GGCCTGAGCATCATGGTTCCATCTGCCCAGGGCTGG...GCTCAGATTCCATCCTGCCCAGCAGGTGCCTGGCACTTTAAGGGACTCTGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR GCA 90 bp | CTGCCAGAGTCCCTTAAAGTGCCAGGCACCTGCTGGGCAGGATGGAATCTGAGCAGGGGAAAAGGCCTTTaGTTACCCAGCACGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LPESLKVPGTCWAGWNLSRGKGL*LPSTAG Trigger: CCCAGCCGTGCTGGGTAAGCAAAGGCCTTTTCCCCT...GCTCAGATTCCATCCTGCCCAGCAGGTGCCTGGCACTTTAAGGGACTCTGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR CCA 90 bp | GGTCACAGGTGGCAGGGTTCTGGGGTGGCCCAGCTCGTGAAGGGCAGGGACAATCACAAGCACCCAACATaGAATGGCTGTGTCCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: GHRWQGSGVAQLVKGRDNHKHPT*NGCVLC Trigger: GCAAAGGACACAGCCATTCCATGTTGGGTGCTTGTG...ATTGTCCCTGCCCTTCACGAGCTGGGCCACCCCAGAACCCTGCCACCTGTGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR CCA 90 bp | TTGCTTACCCAGCACGGCTGGGCCTCGTCCTTCCTTTCCTGCAGGAAGGCCAGCGGACAATATTCACAGTaGCACCCAGGACCAGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: LLTQHGWASSFLSCRKASGQYSQ*HPGPVV Trigger: AACCACTGGTCCTGGGTGCCACTGTGAATATTGTCC...GCTGGCCTTCCTGCAGGAAAGGAAGGACGAGGCCCAGCCGTGCTGGGTAAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR CAA 90 bp | GGACCAGTGGTTCCAGGGTGGATGGGAGGAAAATGGAATGACGCTTaGGGGGCCAGTGTGGCTAGAGTAAGAGGAGGCACAGATGCAATG | + |
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Preference number: 2 (lower is better) Translates to: GPVVPGWMGGKWNDA*GASVARVRGGTDAM Trigger: CATTGCATCTGTGCCTCCTCTTACTCTAGCCACACTGGCCCCCAAAGCGTCATTCCATTTTCCTCCCATCCACCCTGGAACCACTGGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR TCA 90 bp | AGACCTTGGCTTGAGTTAGGCAGGGGCTCTTGGTTTGGGGCAGTCTTCCTGACAGGGAGGAAAATGGAATaGCGCTTTGGGGGCCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: RPWLELGRGSWFGAVFLTGRKME*RFGGQC Trigger: ACACTGGCCCCCAAAGCGTCATTCCATTTTCCTCCC...TGTCAGGAAGACTGCCCCAAACCAAGAGCCCCTGCCTAACTCAAGCCAAGGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR CCA 90 bp | GAGGCACCTATCTCCCCTTGTTGGGGTGGAAGGAATACAAGAACTGTGAACTCACAGTCAGGGCAGTCCTaGCCAGCTCCATCTTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: EAPISPCWGGRNTRTVNSQSGQS*PAPSCP Trigger: GGGGCAAGATGGAGCTGGCCAGGACTGCCCTGACTG...TGAGTTCACAGTTCTTGTATTCCTTCCACCCCAACAAGGGGAGATAGGTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR GCA 90 bp | AGACCTTGGCTTGAGTTAGGCAGGGGCTCTTGGTTTGGGGCAGTCTTCCTGACAGAGGCACAGATGCAATaGAGAGCAGATCCTCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: RPWLELGRGSWFGAVFLTEAQMQ*RADPPG Trigger: TCCTGGAGGATCTGCTCTGCATTGCATCTGTGCCTC...TGTCAGGAAGACTGCCCCAAACCAAGAGCCCCTGCCTAACTCAAGCCAAGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR CCA 90 bp | AGACCTTGGCTTGAGTTAGGCAGGGGCTCTTGGTTTGGGGCAGTCTTCCTGACAAATGGAATGACGCTTTaGGGGCCAGTGTGGCTAGAG | + |
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Preference number: 2 (lower is better) Translates to: RPWLELGRGSWFGAVFLTNGMTL*GPVWLE Trigger: CTCTAGCCACACTGGCCCCCAAAGCGTCATTCCATT...TGTCAGGAAGACTGCCCCAAACCAAGAGCCCCTGCCTAACTCAAGCCAAGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAGTCCTGGCCAGCTCCATCTTGCCCCATTTTCTAGTGGTTCGGAGGACACCAGTGGTTCCAGGGTaGATGGGAGGAAAATGGAAT | + |
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Preference number: 2 (lower is better) Translates to: RAVLASSILPHFLVVRRTPVVPG*MGGKWN Trigger: ATTCCATTTTCCTCCCATCCACCCTGGAACCACTGG...TGTCCTCCGAACCACTAGAAAATGGGGCAAGATGGAGCTGGCCAGGACTGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR CCA 90 bp | ACGGAATGGGGTGCAGTGGTAACCTGGTTAGAAAGGAATAACACAAAAGCAAATGTGGGTCGTGGGGGATaGAGGGATGGGGCAGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: TEWGAVVTWLERNNTKANVGRGG*RDGAGH Trigger: GTGGCCTGCCCCATCCCTCCATCCCCCACGACCCAC...ATTTGCTTTTGTGTTATTCCTTTCTAACCAGGTTACCACTGCACCCCATTCCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR CCA 90 bp | ACGGAATGGGGTGCAGTGGTAACCTGGTTAGAAAGGAATAACACAAAAGCAAATAAGGGCAAGGGCCGGTaGCTGTGCTGGGGACAAGCA | + |
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Preference number: 2 (lower is better) Translates to: TEWGAVVTWLERNNTKANKGKGR*LCWGQA Trigger: TGCTTGTCCCCAGCACAGCCACCGGCCCTTGCCCTT...ATTTGCTTTTGTGTTATTCCTTTCTAACCAGGTTACCACTGCACCCCATTCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR GCA 90 bp | GAGGCACCTATCTCCCCTTGTTGGGGTGGAAGGAATACAAGAACTGTGAACTCAAAGAGGAGGCACAGATaGAATGCAGAGCAGATCCTC | + |
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Preference number: 2 (lower is better) Translates to: EAPISPCWGGRNTRTVNSKRRHR*NAEQIL Trigger: GAGGATCTGCTCTGCATTGCATCTGTGCCTCCTCTT...TGAGTTCACAGTTCTTGTATTCCTTCCACCCCAACAAGGGGAGATAGGTGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR-3UTR GCA 90 bp | ACGGAATGGGGTGCAGTGGTAACCTGGTTAGAAAGGAATAACACAAAAGCAAATCAGAGTCCCTTAAAGTaGCAGGCACCTGCTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: TEWGAVVTWLERNNTKANQSPLK*QAPAGQ Trigger: CTGCCCAGCAGGTGCCTGGCACTTTAAGGGACTCTG...ATTTGCTTTTGTGTTATTCCTTTCTAACCAGGTTACCACTGCACCCCATTCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR TCA 72 bp | GCCAGCTCCAGTTCACCCAGTCACAGGCCACCTGGCTaGCTCTCTAGCCTGGAACCCAGCCCAGGCCGGCTG | + |
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Preference number: 3 (lower is better) Translates to: ASSSSPSHRPPG*LSSLEPSPGRL Trigger: CAGCCGGCCTGGGCTGGGTTCCAGGCTAGAGAGTCAGCCAGGTGGCCTGTGACTGGGTGAACTGGAGCTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR TCA 72 bp | GTCACAGGTGGCAGGGTTCTGGGGTGGCCCAGCTCGTaGAGGGCAGGGACAATGGAGCAAGTGCCCCGTCAG | + |
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Preference number: 3 (lower is better) Translates to: VTGGRVLGWPSS*RAGTMEQVPRQ Trigger: CTGACGGGGCACTTGCTCCATTGTCCCTGCCCTTCACGAGCTGGGCCACCCCAGAACCCTGCCACCTGTGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR GCA 72 bp | GGGCAAGGGCCGGTGGCTGTGCTGGGGACAAGCATGTaGAAAGTGCAGGCTGCAGGGCAGCAGGAGGACAGT | + |
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Preference number: 3 (lower is better) Translates to: GQGPVAVLGTSM*KVQAAGQQEDS Trigger: ACTGTCCTCCTGCTGCCCTGCAGCCTGCACTTTGCACATGCTTGTCCCCAGCACAGCCACCGGCCCTTGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR CCA 72 bp | ATCCTCCAGGAATGCCACGGGCCTGGGTGCCAGAGATaGCAGGACCCTTCTTCAGCCGGACTCCTGGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: ILQECHGPGCQR*QDPSSAGLLGP Trigger: GGGACCCAGGAGTCCGGCTGAAGAAGGGTCCTGCCATCTCTGGCACCCAGGCCCGTGGCATTCCTGGAGGAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR GCA 72 bp | GCAGAGCAGATCCTCCAGGAATGCCACGGGCCTGGGTaGCAGAGATGGCAGGACCCTTCTTCAGCCGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: AEQILQECHGPG*QRWQDPSSAGL Trigger: GAGTCCGGCTGAAGAAGGGTCCTGCCATCTCTGGCACCCAGGCCCGTGGCATTCCTGGAGGATCTGCTCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR GCA 72 bp | GGCCCAGCTCGTGAAGGGCAGGGACAATGGAGCAAGTaGCCCGTCAGCCTGGCTGAAGCTGCTGCTCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GPAREGQGQWSK*PVSLAEAAAPE Trigger: TTCAGGAGCAGCAGCTTCAGCCAGGCTGACGGGGCACTTGCTCCATTGTCCCTGCCCTTCACGAGCTGGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR CCA 72 bp | TTCTGGGGTGGCCCAGCTCGTGAAGGGCAGGGACAATaGAGCAAGTGCCCCGTCAGCCTGGCTGAAGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: FWGGPAREGQGQ*SKCPVSLAEAA Trigger: AGCAGCTTCAGCCAGGCTGACGGGGCACTTGCTCCATTGTCCCTGCCCTTCACGAGCTGGGCCACCCCAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR CCA 72 bp | CAGCACCCAGGAGGTCTGGAGAAGGGCAAGGGCCGGTaGCTGTGCTGGGGACAAGCATGTGCAAAGTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QHPGGLEKGKGR*LCWGQACAKCR Trigger: CCTGCACTTTGCACATGCTTGTCCCCAGCACAGCCACCGGCCCTTGCCCTTCTCCAGACCTCCTGGGTGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR GCA 72 bp | CACGTTCCAGCCGGGCGACTGTACCCTAGGTCTGGTTaGACAGCAGACAGCACCCAGGAGGTCTGGAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: HVPAGRLYPRSG*TADSTQEVWRR Trigger: CCTTCTCCAGACCTCCTGGGTGCTGTCTGCTGTGCAACCAGACCTAGGGTACAGTCGCCCGGCTGGAACGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR CCA 72 bp | CAATGCAGAGCAGATCCTCCAGGAATGCCACGGGCCTaGGTGCCAGAGATGGCAGGACCCTTCTTCAGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: QCRADPPGMPRA*VPEMAGPFFSR Trigger: CCGGCTGAAGAAGGGTCCTGCCATCTCTGGCACCCAGGCCCGTGGCATTCCTGGAGGATCTGCTCTGCATTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR CCA 72 bp | GGATGGAGGGATGGGGCAGGCCACAAGCACCCAACATaGAATGGCTGTGTCCTTTGCTGGGCCCAGGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GWRDGAGHKHPT*NGCVLCWAQVL Trigger: GAGGACCTGGGCCCAGCAAAGGACACAGCCATTCCATGTTGGGTGCTTGTGGCCTGCCCCATCCCTCCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR CCA 72 bp | GAGCAGGGGAAAAGGCCTTTGCTTACCCAGCACGGCTaGGCCTCGTCCTTCCTTTCCTGCAGGAAGGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: EQGKRPLLTQHG*ASSFLSCRKAS Trigger: GCTGGCCTTCCTGCAGGAAAGGAAGGACGAGGCCCAGCCGTGCTGGGTAAGCAAAGGCCTTTTCCCCTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR TCA 72 bp | CTCTCTAGCCTGGAACCCAGCCCAGGCCGGCTGACATaGGAGCAGGGGAAAAGGCCTTTGCTTACCCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LSSLEPSPGRLT*EQGKRPLLTQH Trigger: GTGCTGGGTAAGCAAAGGCCTTTTCCCCTGCTCTCATGTCAGCCGGCCTGGGCTGGGTTCCAGGCTAGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR TCA 72 bp | GCTGACTCTCTAGCCTGGAACCCAGCCCAGGCCGGCTaGCATGAGAGCAGGGGAAAAGGCCTTTGCTTACCC | + |
|
Preference number: 3 (lower is better) Translates to: ADSLAWNPAQAG*HESRGKGLCLP Trigger: GGGTAAGCAAAGGCCTTTTCCCCTGCTCTCATGTCAGCCGGCCTGGGCTGGGTTCCAGGCTAGAGAGTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR GCA 72 bp | AGGCACAGATGCAATGCAGAGCAGATCCTCCAGGAATaGCACGGGCCTGGGTGCCAGAGATGGCAGGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: RHRCNAEQILQE*HGPGCQRWQDP Trigger: AGGGTCCTGCCATCTCTGGCACCCAGGCCCGTGGCATTCCTGGAGGATCTGCTCTGCATTGCATCTGTGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR GCA 72 bp | GGCCACAAGCACCCAACATGGAATGGCTGTGTCCTTTaGTGGGCCCAGGTCCTCTCCAGTCAGGGCAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GHKHPTWNGCVL*WAQVLSSQGSP Trigger: AGGACTGCCCTGACTGGAGAGGACCTGGGCCCAGCAAAGGACACAGCCATTCCATGTTGGGTGCTTGTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR CCA 72 bp | CACAGTGGCACCCAGGACCAGTGGTTCCAGGGTGGATaGGAGGAAAATGGAATGACGCTTTGGGGGCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: HSGTQDQWFQGG*EENGMTLWGPV Trigger: CACTGGCCCCCAAAGCGTCATTCCATTTTCCTCCCATCCACCCTGGAACCACTGGTCCTGGGTGCCACTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR CCA 72 bp | GAGCTGCCAGAGTCCCTTAAAGTGCCAGGCACCTGCTaGGCAGGATGGAATCTGAGCTGCCGGAACCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: ELPESLKVPGTC*AGWNLSCRNLL Trigger: GAGAAGGTTCCGGCAGCTCAGATTCCATCCTGCCCAGCAGGTGCCTGGCACTTTAAGGGACTCTGGCAGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR GCA 72 bp | ACAGAGCTGCCAGAGTCCCTTAAAGTGCCAGGCACCTaGTGGGCAGGATGGAATCTGAGCTGCCGGAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: TELPESLKVPGT*WAGWNLSCRNL Trigger: AAGGTTCCGGCAGCTCAGATTCCATCCTGCCCAGCAGGTGCCTGGCACTTTAAGGGACTCTGGCAGCTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR CCA 72 bp | GGAAGCAGAGGATGTGGCAGCTCTCGTCTACTGGAGTaGCCATCCAGTCCCAGACCTTGGCTTGAGTTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GSRGCGSSRLLE*PSSPRPWLELG Trigger: GCCTAACTCAAGCCAAGGTCTGGGACTGGATGGCCACTCCAGTAGACGAGAGCTGCCACATCCTCTGCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR CCA 72 bp | TGCCTGGAAGCAGAGGATGTGGCAGCTCTCGTCTACTaGAGTGGCCATCCAGTCCCAGACCTTGGCTTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: CLEAEDVAALVY*SGHPVPDLGLS Trigger: ACTCAAGCCAAGGTCTGGGACTGGATGGCCACTCCAGTAGACGAGAGCTGCCACATCCTCTGCTTCCAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR-3UTR CAA 90 bp | CACCCAACATGGAATGGCTGTGTCCTTTGCTGGGCCCAGGTCCTCTCCAGTCAGCTGGCCAGCTCCATCTaGCCCCATTTTCTAGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: HPTWNGCVLCWAQVLSSQLASSI*PHFLVV Trigger: AACCACTAGAAAATGGGGCAAGATGGAGCTGGCCAG...CTGACTGGAGAGGACCTGGGCCCAGCAAAGGACACAGCCATTCCATGTTGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR TCA 72 bp | TTAAGGAGGTGGGGTCTCAATCCAGAGTGTGGGGTTTaGGGTCTTAGCTCCCAGGAGAGAGCTGCCTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LRRWGLNPECGV*GLSSQERAACR Trigger: CCTGCAGGCAGCTCTCTCCTGGGAGCTAAGACCTCAAACCCCACACTCTGGATTGAGACCCCACCTCCTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR TCA 72 bp | TCTACTGGAGTGGCCATCCAGTCCCAGACCTTGGCTTaGGTTAGGCAGGGGCTCTTGGTTTGGGGCAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: STGVAIQSQTLA*VRQGLLVWGSL Trigger: AAGACTGCCCCAAACCAAGAGCCCCTGCCTAACTCAAGCCAAGGTCTGGGACTGGATGGCCACTCCAGTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR CCA 72 bp | CCAGGACCAGTGGTTCCAGGGTGGATGGGAGGAAAATaGAATGACGCTTTGGGGGCCAGTGTGGCTAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: PGPVVPGWMGGK*NDALGASVARV Trigger: TACTCTAGCCACACTGGCCCCCAAAGCGTCATTCCATTTTCCTCCCATCCACCCTGGAACCACTGGTCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR CCA 72 bp | AAACAATGTCCCATACTCGCCTATCCCCAGCCCTGCTaGGGTGCAGGTGGAATGGGGAACAGAGGCACCTAT | + |
|
Preference number: 3 (lower is better) Translates to: KQCPILAYPQPC*GAGGMGNRGTY Trigger: ATAGGTGCCTCTGTTCCCCATTCCACCTGCACCCCAGCAGGGCTGGGGATAGGCGAGTATGGGACATTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR CCA 72 bp | AGTCCCAGACCTTGGCTTGAGTTAGGCAGGGGCTCTTaGTTTGGGGCAGTCTTCCTGACAGTACCAACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SPRPWLELGRGS*FGAVFLTVPTA Trigger: AGCAGTTGGTACTGTCAGGAAGACTGCCCCAAACCAAGAGCCCCTGCCTAACTCAAGCCAAGGTCTGGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR GCA 72 bp | ACAAAAGCAAATTCTCCCCACAGAAGAAGATGGGCCTaGTCATCCTGCCAGACCACGTGGTCAGCTGTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: TKANSPHRRRWA*SSCQTTWSAVG Trigger: CCCTACAGCTGACCACGTGGTCTGGCAGGATGAGCAGGCCCATCTTCTTCTGTGGGGAGAATTTGCTTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR CCA 72 bp | GGATCACTGAGCGCAGGAGGAAAGGCTCTTAGCCTCTaGCTGCCACCAGTGTTCATTTGGTTGTGGTCATGT | + |
|
Preference number: 3 (lower is better) Translates to: GSLSAGGKALSL*LPPVFIWLWSC Trigger: ACATGACCACAACCAAATGAACACTGGTGGCAGCCAGAGGCTAAGAGCCTTTCCTCCTGCGCTCAGTGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR TCA 72 bp | GGCAGCTCTAAGACCACAGCCCCAACTTTTGCTAGCTaGGGAAGACACAAACTAGGCAAGGACCTTCCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: GSSKTTAPTFAS*GRHKLGKDLPN Trigger: GTTGGGAAGGTCCTTGCCTAGTTTGTGTCTTCCTCAGCTAGCAAAAGTTGGGGCTGTGGTCTTAGAGCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR CCA 72 bp | GTCATGTTTTCAGCTAAGTTATCCTGGCCCAGTGCCTaGAAGCAGAGGATGTGGCAGCTCTCGTCTACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VMFSAKLSWPSA*KQRMWQLSSTG Trigger: TCCAGTAGACGAGAGCTGCCACATCCTCTGCTTCCAGGCACTGGGCCAGGATAACTTAGCTGAAAACATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR CCA 72 bp | GTGGAATGGGGAACAGAGGCACCTATCTCCCCTTGTTaGGGTGGAAGGAATACAAGAACTGTGAACTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VEWGTEAPISPC*GGRNTRTVNSG Trigger: TCCTGAGTTCACAGTTCTTGTATTCCTTCCACCCCAACAAGGGGAGATAGGTGCCTCTGTTCCCCATTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR CCA 72 bp | CATTTGGTTGTGGTCATGTTTTCAGCTAAGTTATCCTaGCCCAGTGCCTGGAAGCAGAGGATGTGGCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: HLVVVMFSAKLS*PSAWKQRMWQL Trigger: GAGCTGCCACATCCTCTGCTTCCAGGCACTGGGCCAGGATAACTTAGCTGAAAACATGACCACAACCAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR TCA 72 bp | ACAACGGCTACAGAACCTATAGAAATGATCTGGTCCTaGCACCAGGCAGCTCTAAGACCACAGCCCCAACTT | + |
|
Preference number: 3 (lower is better) Translates to: TTATEPIEMIWS*HQAALRPQPQL Trigger: AAGTTGGGGCTGTGGTCTTAGAGCTGCCTGGTGTCAGGACCAGATCATTTCTATAGGTTCTGTAGCCGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR GCA 72 bp | GAATCTGAGCTGCCGGAACCTTCTCTAGCCATGTTCTaGCTTGCCTTGGCAGCATCTTCTAACATTCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: ESELPEPSLAMF*LALAASSNIHL Trigger: CAGATGAATGTTAGAAGATGCTGCCAAGGCAAGGCAGAACATGGCTAGAGAAGGTTCCGGCAGCTCAGATTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR CCA 72 bp | CTTAGCCTCTGGCTGCCACCAGTGTTCATTTGGTTGTaGTCATGTTTTCAGCTAAGTTATCCTGGCCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LSLWLPPVFIWL*SCFQLSYPGPV Trigger: CACTGGGCCAGGATAACTTAGCTGAAAACATGACCACAACCAAATGAACACTGGTGGCAGCCAGAGGCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR-3UTR CAA 90 bp | ACGGAATGGGGTGCAGTGGTAACCTGGTTAGAAAGGAATAACACAAAAGCAAATGTTAGGCAGGGGCTCTaGGTTTGGGGCAGTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: TEWGAVVTWLERNNTKANVRQGL*VWGSLP Trigger: AGGAAGACTGCCCCAAACCAAGAGCCCCTGCCTAAC...ATTTGCTTTTGTGTTATTCCTTTCTAACCAGGTTACCACTGCACCCCATTCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR TCA 72 bp | GGAGCCCTGGAATTTAGAACTAGACCAAAACAATGCTaGCTGGGGAAGGTAGTAGACAAGCACACTAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GALEFRTRPKQC*LGKVVDKHTRA Trigger: AGCCCTAGTGTGCTTGTCTACTACCTTCCCCAGTCAGCATTGTTTTGGTCTAGTTCTAAATTCCAGGGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR CCA 72 bp | TATGAACAGCCCACGGAATGGGGTGCAGTGGTAACCTaGTTAGAAAGGAATAACACAAAAGCAAATTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: YEQPTEWGAVVT*LERNNTKANSP Trigger: GGGAGAATTTGCTTTTGTGTTATTCCTTTCTAACCAGGTTACCACTGCACCCCATTCCGTGGGCTGTTCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR-3UTR CAA 90 bp | ACGGAATGGGGTGCAGTGGTAACCTGGTTAGAAAGGAATAACACAAAAGCAAATGGTCCCAAACTGGCATaGCATAGACCAATTCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: TEWGAVVTWLERNNTKANGPKLA*HRPIPF Trigger: AAAAGGAATTGGTCTATGCAATGCCAGTTTGGGACC...ATTTGCTTTTGTGTTATTCCTTTCTAACCAGGTTACCACTGCACCCCATTCCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| 3UTR TCA 72 bp | TATGACATAATTTTCTATTATAAGCTGAGACAGATATaGACAGCCCACGGAATGGGGTGCAGTGGTAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: YDIIFYYKLRQI*TAHGMGCSGNL Trigger: CAGGTTACCACTGCACCCCATTCCGTGGGCTGTTCATATCTGTCTCAGCTTATAATAGAAAATTATGTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR CCA 90 bp | GGTCACAGGTGGCAGGGTTCTGGGGTGGCCCAGCTCGTGAAGGGCAGGGACAATGTCCTGAGCCCAGGATaGTGGGCCGGGTCTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GHRWQGSGVAQLVKGRDNVLSPG*WAGSWG Trigger: CCCCCAAGACCCGGCCCACCATCCTGGGCTCAGGAC...ATTGTCCCTGCCCTTCACGAGCTGGGCCACCCCAGAACCCTGCCACCTGTGACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR GCA 90 bp | GGTTGCACAGCAGACAGCACCCAGGAGGTCTGGAGAAGGGCAAGGGCCGGTGGCGGGAATTGGTGCTGCTaGTGCCACCGCTGCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GCTADSTQEVWRRARAGGGNWCC*CHRCWS Trigger: GGACCAGCAGCGGTGGCAGCAGCAGCACCAATTCCC...GCCACCGGCCCTTGCCCTTCTCCAGACCTCCTGGGTGCTGTCTGCTGTGCAACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR CCA 90 bp | GGTCACAGGTGGCAGGGTTCTGGGGTGGCCCAGCTCGTGAAGGGCAGGGACAATTGGTGGGCCGGGTCTTaGGGGGCCGGGATCCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GHRWQGSGVAQLVKGRDNWWAGS*GAGIQL Trigger: TAACTGGATCCCGGCCCCCCAAGACCCGGCCCACCA...ATTGTCCCTGCCCTTCACGAGCTGGGCCACCCCAGAACCCTGCCACCTGTGACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR CCA 90 bp | GCTGGGCCTCGTCCTTCCTTTCCTGCAGGAAGGCCAGCTGCTCAGGACCCAGCCTGCAGGGAGGAGTCCTaGCCCGGGATGGAGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AGPRPSFPAGRPAAQDPACREES*PGMEMD Trigger: ATCCATCTCCATCCCGGGCCAGGACTCCTCCCTGCA...GGCTGGGTCCTGAGCAGCTGGCCTTCCTGCAGGAAAGGAAGGACGAGGCCCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR TCA 90 bp | GCTGGGCCTCGTCCTTCCTTTCCTGCAGGAAGGCCAGCTGCTCAGGACCCAGCCCCCTGGACGACAAGCTaGCAAAATCCCCGCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGPRPSFPAGRPAAQDPAPWTTS*QNPRHP Trigger: TGGATGGCGGGGATTTTGTCAGCTTGTCGTCCAGGG...GGCTGGGTCCTGAGCAGCTGGCCTTCCTGCAGGAAAGGAAGGACGAGGCCCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR GCA 90 bp | GGTTGCACAGCAGACAGCACCCAGGAGGTCTGGAGAAGGGCAAGGGCCGGTGGCTGGCATAGCTGGAGTTaGGGGAGTGGCCAGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GCTADSTQEVWRRARAGGWHSWS*GSGQSG Trigger: TCCACTCTGGCCACTCCCGCAACTCCAGCTATGCCA...GCCACCGGCCCTTGCCCTTCTCCAGACCTCCTGGGTGCTGTCTGCTGTGCAACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR GCA 90 bp | GGTTGCACAGCAGACAGCACCCAGGAGGTCTGGAGAAGGGCAAGGGCCGGTGGCCACCAGAGGCGCTGCTaGTGGTGGATGTATTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GCTADSTQEVWRRARAGGHQRRC*WWMYFC Trigger: GCAGAAATACATCCACCAGCAGCAGCGCCTCTGGTG...GCCACCGGCCCTTGCCCTTCTCCAGACCTCCTGGGTGCTGTCTGCTGTGCAACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR GCA 90 bp | TTGCTTACCCAGCACGGCTGGGCCTCGTCCTTCCTTTCCTGCAGGAAGGCCAGCTTCTCAGAGGGCCGATaGTCCCTCTCCATGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLTQHGWASSFLSCRKASFSEGR*SLSMPS Trigger: TGAGGGCATGGAGAGGGAGCATCGGCCCTCTGAGAA...GCTGGCCTTCCTGCAGGAAAGGAAGGACGAGGCCCAGCCGTGCTGGGTAAGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR GCA 90 bp | CAGATCCTCCAGGAATGCCACGGGCCTGGGTGCCAGAGATGGCAGGACCCTTCTTGTTGCCCAGCTGAATaGCGCTCAGTGTGGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QILQECHGPGCQRWQDPSCCPAE*RSVWWS Trigger: GCTCCACCACACTGAGCGGCATTCAGCTGGGCAACA...AGAAGGGTCCTGCCATCTCTGGCACCCAGGCCCGTGGCATTCCTGGAGGATCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR CCA 90 bp | CACGGCTGGGCCTCGTCCTTCCTTTCCTGCAGGAAGGCCAGCTGCTCAGGACCCAGGATGGAGTTGTCCTaGCGGGTATTCTTGGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HGWASSFLSCRKASCSGPRMELS*RVFLVS Trigger: CGACACCAAGAATACCCGCCAGGACAACTCCATCCT...GGGTCCTGAGCAGCTGGCCTTCCTGCAGGAAAGGAAGGACGAGGCCCAGCCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR CCA 90 bp | CACGGCTGGGCCTCGTCCTTCCTTTCCTGCAGGAAGGCCAGCTGCTCAGGACCCTGTAGCCAGATAGCTTaGACTGCTGGCTGGCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: HGWASSFLSCRKASCSGPCSQIA*TAGWHS Trigger: GCTATGCCAGCCAGCAGTCCAAGCTATCTGGCTACA...GGGTCCTGAGCAGCTGGCCTTCCTGCAGGAAAGGAAGGACGAGGCCCAGCCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR CCA 90 bp | CACGGCTGGGCCTCGTCCTTCCTTTCCTGCAGGAAGGCCAGCTGCTCAGGACCCTCTACCCAGGTTGGGTaGCTCTCCACAGAGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HGWASSFLSCRKASCSGPSTQVG*LSTESF Trigger: GAAAGACTCTGTGGAGAGCCACCCAACCTGGGTAGA...GGGTCCTGAGCAGCTGGCCTTCCTGCAGGAAAGGAAGGACGAGGCCCAGCCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR GCA 90 bp | GGGGAAAAGGCCTTTGCTTACCCAGCACGGCTGGGCCTCGTCCTTCCTTTCCTGTTAGGGAATTGGTGCTaGTGCTGCCACCGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GEKAFAYPARLGLVLPFLLGNWC*CCHRCW Trigger: CCAGCAGCGGTGGCAGCAGCAGCACCAATTCCCTAA...CAGGAAAGGAAGGACGAGGCCCAGCCGTGCTGGGTAAGCAAAGGCCTTTTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR CCA 90 bp | CACCCAACATGGAATGGCTGTGTCCTTTGCTGGGCCCAGGTCCTCTCCAGTCAGCGGGAGTGGCCAGAGTaGAACACCTCCTCAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: HPTWNGCVLCWAQVLSSQREWPE*NTSSGL Trigger: CAGTCCTGAGGAGGTGTTCCACTCTGGCCACTCCCG...CTGACTGGAGAGGACCTGGGCCCAGCAAAGGACACAGCCATTCCATGTTGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS-3UTR CCA 90 bp | CAGATCCTCCAGGAATGCCACGGGCCTGGGTGCCAGAGATGGCAGGACCCTTCTAGGCGCTGCTGCTGGTaGATGTATTTCTGCGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QILQECHGPGCQRWQDPSRRCCW*MYFCGV Trigger: CACACCGCAGAAATACATCCACCAGCAGCAGCGCCT...AGAAGGGTCCTGCCATCTCTGGCACCCAGGCCCGTGGCATTCCTGGAGGATCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR TCA 90 bp | ATGCAATGCAGAGCAGATCCTCCAGGAATGCCACGGGCCTGGGTGCCAGAGATGACTCTGTTGCCCAGCTaGATGCCGCTCAGTGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MQCRADPPGMPRAWVPEMTLLPS*MPLSVV Trigger: CACCACACTGAGCGGCATTCAGCTGGGCAACAGAGT...CATCTCTGGCACCCAGGCCCGTGGCATTCCTGGAGGATCTGCTCTGCATTGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS-3UTR GCA 90 bp | CACAGTGGCACCCAGGACCAGTGGTTCCAGGGTGGATGGGAGGAAAATGGAATGCCTTTACACGTCAGCTaGAGGGAGGAGTCCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HSGTQDQWFQGGWEENGMPLHVS*REESWP Trigger: GGGCCAGGACTCCTCCCTGCAGCTGACGTGTAAAGG...CATTCCATTTTCCTCCCATCCACCCTGGAACCACTGGTCCTGGGTGCCACTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR GCA 90 bp | CACCCAACATGGAATGGCTGTGTCCTTTGCTGGGCCCAGGTCCTCTCCAGTCAGGATGCTCCCTCTCCATaGCCTCAGGACCCTCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: HPTWNGCVLCWAQVLSSQDAPSP*PQDPLQ Trigger: CTGTAGAGGGTCCTGAGGGCATGGAGAGGGAGCATC...CTGACTGGAGAGGACCTGGGCCCAGCAAAGGACACAGCCATTCCATGTTGGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS-3UTR CCA 90 bp | AGACCTTGGCTTGAGTTAGGCAGGGGCTCTTGGTTTGGGGCAGTCTTCCTGACAGGTCCAGCAGGCCTGTaGCCGGGTTGGCACTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RPWLELGRGSWFGAVFLTGPAGL*PGWHSF Trigger: AAATGAGTGCCAACCCGGCCACAGGCCTGCTGGACC...TGTCAGGAAGACTGCCCCAAACCAAGAGCCCCTGCCTAACTCAAGCCAAGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR CCA 90 bp | AGACCTTGGCTTGAGTTAGGCAGGGGCTCTTGGTTTGGGGCAGTCTTCCTGACATGCCGCTCAGTGTGGTaGAGCCATCACGGCTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: RPWLELGRGSWFGAVFLTCRSVW*SHHGSR Trigger: TCGTGAGCCGTGATGGCTCCACCACACTGAGCGGCA...TGTCAGGAAGACTGCCCCAAACCAAGAGCCCCTGCCTAACTCAAGCCAAGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR GCA 90 bp | AGACCTTGGCTTGAGTTAGGCAGGGGCTCTTGGTTTGGGGCAGTCTTCCTGACAGGCCACCAGAGGCGCTaGTGCTGGTGGATGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: RPWLELGRGSWFGAVFLTGHQRR*CWWMYF Trigger: GAAATACATCCACCAGCAGCAGCGCCTCTGGTGGCC...TGTCAGGAAGACTGCCCCAAACCAAGAGCCCCTGCCTAACTCAAGCCAAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR CCA 90 bp | AGACCTTGGCTTGAGTTAGGCAGGGGCTCTTGGTTTGGGGCAGTCTTCCTGACAGGACTGGACAGGCTCTaGTCTGGCTCCTCTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RPWLELGRGSWFGAVFLTGLDRL*SGSSGS Trigger: ACTACCAGAGGAGCCAGACCAGAGCCTGTCCAGTCC...TGTCAGGAAGACTGCCCCAAACCAAGAGCCCCTGCCTAACTCAAGCCAAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR CCA 90 bp | AGGAGGACAGTTAAGGAGGTGGGGTCTCAATCCAGAGTGTGGGGTTTGAGGTCTCTGGAGTTGCGGGAGTaGCCAGAGTGGAACACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRTVKEVGSQSRVWGLRSLELRE*PEWNTS Trigger: GGAGGTGTTCCACTCTGGCCACTCCCGCAACTCCAG...AGACCTCAAACCCCACACTCTGGATTGAGACCCCACCTCCTTAACTGTCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR CCA 90 bp | CAGATCCTCCAGGAATGCCACGGGCCTGGGTGCCAGAGATGGCAGGACCCTTCTCCATCAGTGAAGTCCTaGCTCTGCATTATCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QILQECHGPGCQRWQDPSPSVKS*LCIIFS Trigger: GGAGAAGATAATGCAGAGCCAGGACTTCACTGATGG...AGAAGGGTCCTGCCATCTCTGGCACCCAGGCCCGTGGCATTCCTGGAGGATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS-3UTR TCA 90 bp | CTGCCAGAGTCCCTTAAAGTGCCAGGCACCTGCTGGGCAGGATGGAATCTGAGCCTAGGTTCAAGTCAGTaGAGCCCAGCTTGGAATACG | + |
|
Preference number: 4 (lower is better) Translates to: LPESLKVPGTCWAGWNLSLGSSQ*SPAWNT Trigger: CGTATTCCAAGCTGGGCTTCACTGACTTGAACCTAG...GCTCAGATTCCATCCTGCCCAGCAGGTGCCTGGCACTTTAAGGGACTCTGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR GCA 90 bp | AGGAGGACAGTTAAGGAGGTGGGGTCTCAATCCAGAGTGTGGGGTTTGAGGTCTCGTACACAGTTCTCCTaGACCTCCTCCCTGGACGAC | + |
|
Preference number: 4 (lower is better) Translates to: RRTVKEVGSQSRVWGLRSRTQFS*TSSLDD Trigger: GTCGTCCAGGGAGGAGGTGCAGGAGAACTGTGTACG...AGACCTCAAACCCCACACTCTGGATTGAGACCCCACCTCCTTAACTGTCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR CCA 90 bp | AGACCTTGGCTTGAGTTAGGCAGGGGCTCTTGGTTTGGGGCAGTCTTCCTGACACAGAGGCGCTGCTGCTaGTGGATGTATTTCTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RPWLELGRGSWFGAVFLTQRRCC*WMYFCG Trigger: ACCGCAGAAATACATCCACCAGCAGCAGCGCCTCTG...TGTCAGGAAGACTGCCCCAAACCAAGAGCCCCTGCCTAACTCAAGCCAAGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS-3UTR CCA 90 bp | AGGAGGACAGTTAAGGAGGTGGGGTCTCAATCCAGAGTGTGGGGTTTGAGGTCTGAATGCCGCTCAGTGTaGTGGAGCCATCACGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RRTVKEVGSQSRVWGLRSECRSV*WSHHGS Trigger: TGAGCCGTGATGGCTCCACCACACTGAGCGGCATTC...AGACCTCAAACCCCACACTCTGGATTGAGACCCCACCTCCTTAACTGTCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR CAA 72 bp | GTTCCAGGGTGGATGGGAGGAAAATGGAATGACGCTTaGGGGGCCAGTGTGGCTAGAGTAAGAGGAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VPGWMGGKWNDA*GASVARVRGGT Trigger: TGTGCCTCCTCTTACTCTAGCCACACTGGCCCCCAAAGCGTCATTCCATTTTCCTCCCATCCACCCTGGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS-3UTR GCA 90 bp | GAGGCACCTATCTCCCCTTGTTGGGGTGGAAGGAATACAAGAACTGTGAACTCATGCTGCTGCCACCGCTaGTGGTCCCACCACCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: EAPISPCWGGRNTRTVNSCCCHR*WSHHLY Trigger: GTAAAGGTGGTGGGACCAGCAGCGGTGGCAGCAGCA...TGAGTTCACAGTTCTTGTATTCCTTCCACCCCAACAAGGGGAGATAGGTGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS-3UTR CCA 90 bp | AGGAGGACAGTTAAGGAGGTGGGGTCTCAATCCAGAGTGTGGGGTTTGAGGTCTATCCAGTTAGGGAATTaGTGCTGCTGCTGCCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: RRTVKEVGSQSRVWGLRSIQLGN*CCCCHR Trigger: GCGGTGGCAGCAGCAGCACCAATTCCCTAACTGGAT...AGACCTCAAACCCCACACTCTGGATTGAGACCCCACCTCCTTAACTGTCCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR CAA 72 bp | TCCTCTCCAGTCAGGGCAGTCCTGGCCAGCTCCATCTaGCCCCATTTTCTAGTGGTTCGGAGGACAATATTC | + |
|
Preference number: 4 (lower is better) Translates to: SSPVRAVLASSI*PHFLVVRRTIF Trigger: GAATATTGTCCTCCGAACCACTAGAAAATGGGGCAAGATGGAGCTGGCCAGGACTGCCCTGACTGGAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS-3UTR GCA 90 bp | GAGGCACCTATCTCCCCTTGTTGGGGTGGAAGGAATACAAGAACTGTGAACTCACAGTTAGGGAATTGGTaGTGCTGCTGCCACCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EAPISPCWGGRNTRTVNSQLGNW*CCCHRC Trigger: GCAGCGGTGGCAGCAGCAGCACCAATTCCCTAACTG...TGAGTTCACAGTTCTTGTATTCCTTCCACCCCAACAAGGGGAGATAGGTGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS-3UTR GCA 90 bp | GAGGCACCTATCTCCCCTTGTTGGGGTGGAAGGAATACAAGAACTGTGAACTCATGGTGGATGTATTTCTaGGGTGTGTCAAGTCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: EAPISPCWGGRNTRTVNSWWMYF*GVSSQT Trigger: TGTCTGACTTGACACACCGCAGAAATACATCCACCA...TGAGTTCACAGTTCTTGTATTCCTTCCACCCCAACAAGGGGAGATAGGTGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| 3UTR CAA 72 bp | CTGCCGGAACCTTCTCTAGCCATGTTCTGCCTTGCCTaGGCAGCATCTTCTAACATTCATCTGCTGATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPEPSLAMFCLA*AASSNIHLLIK Trigger: TTTAATCAGCAGATGAATGTTAGAAGATGCTGCCAAGGCAAGGCAGAACATGGCTAGAGAAGGTTCCGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS-3UTR GCA 90 bp | ACGGAATGGGGTGCAGTGGTAACCTGGTTAGAAAGGAATAACACAAAAGCAAATGTGAAGTCCTGGCTCTaGATTATCTTCTCCACAATG | + |
|
Preference number: 4 (lower is better) Translates to: TEWGAVVTWLERNNTKANVKSWL*IIFSTM Trigger: CATTGTGGAGAAGATAATGCAGAGCCAGGACTTCAC...ATTTGCTTTTGTGTTATTCCTTTCTAACCAGGTTACCACTGCACCCCATTCCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CCA 90 bp | CTGGCTCCTCTGGTAGTCCTGAGCCCAGGATGGTGGGCCGGGTCTTaGGGGGCCGGGATCCAGTTAGGGAATTGGTGCTGCTGCTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LAPLVVLSPGWWAGS*GAGIQLGNWCCCCH Trigger: GTGGCAGCAGCAGCACCAATTCCCTAACTGGATCCCGGCCCCCCAAGACCCGGCCCACCATCCTGGGCTCAGGACTACCAGAGGAGCCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CCA 90 bp | CGGGAGTGGCCAGAGTGGAACACCTCCTCAGGACTGGACAGGCTCTaGTCTGGCTCCTCTGGTAGTCCTGAGCCCAGGATGGTGGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: REWPEWNTSSGLDRL*SGSSGSPEPRMVGR Trigger: CCGGCCCACCATCCTGGGCTCAGGACTACCAGAGGAGCCAGACCAGAGCCTGTCCAGTCCTGAGGAGGTGTTCCACTCTGGCCACTCCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS GCA 90 bp | CTGCTGCTGCCACCGCTGCTGGTCCCACCACCTTTACACGTCAGCTaGAGGGAGGAGTCCTGGCCCGGGATGGAGATGGATTTGGCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LLLPPLLVPPPLHVS*REESWPGMEMDLAV Trigger: TACCGCCAAATCCATCTCCATCCCGGGCCAGGACTCCTCCCTGCAGCTGACGTGTAAAGGTGGTGGGACCAGCAGCGGTGGCAGCAGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CCA 90 bp | GCCGGGATCCAGTTAGGGAATTGGTGCTGCTGCTGCCACCGCTGCTaGTCCCACCACCTTTACACGTCAGCTGCAGGGAGGAGTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: AGIQLGNWCCCCHRC*SHHLYTSAAGRSPG Trigger: GCCAGGACTCCTCCCTGCAGCTGACGTGTAAAGGTGGTGGGACCAGCAGCGGTGGCAGCAGCAGCACCAATTCCCTAACTGGATCCCGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CCA 90 bp | CTGCTGGTCCCACCACCTTTACACGTCAGCTGCAGGGAGGAGTCCTaGCCCGGGATGGAGATGGATTTGGCGGTAGACGGTGGCGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLVPPPLHVSCREES*PGMEMDLAVDGGVL Trigger: CAAGACGCCACCGTCTACCGCCAAATCCATCTCCATCCCGGGCCAGGACTCCTCCCTGCAGCTGACGTGTAAAGGTGGTGGGACCAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CCA 90 bp | AGCTGGAGTTGCGGGAGTGGCCAGAGTGGAACACCTCCTCAGGACTaGACAGGCTCTGGTCTGGCTCCTCTGGTAGTCCTGAGCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SWSCGSGQSGTPPQD*TGSGLAPLVVLSPG Trigger: TCCTGGGCTCAGGACTACCAGAGGAGCCAGACCAGAGCCTGTCCAGTCCTGAGGAGGTGTTCCACTCTGGCCACTCCCGCAACTCCAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS-3UTR CAA 90 bp | CAGATCCTCCAGGAATGCCACGGGCCTGGGTGCCAGAGATGGCAGGACCCTTCTGTAGACGGTGGCGTCTaGAAACAGGGGTCCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QILQECHGPGCQRWQDPSVDGGV*KQGSPE Trigger: CTCTGGGGACCCCTGTTTCAAGACGCCACCGTCTAC...AGAAGGGTCCTGCCATCTCTGGCACCCAGGCCCGTGGCATTCCTGGAGGATCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS GCA 90 bp | CGACTGGCTCGTAGACTCCCGAGGAGACTCTGTTGCCCAGCTGAATaGCGCTCAGTGTGGTGGAGCCATCACGGCTCACGAACAGCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: RLARRLPRRLCCPAE*RSVWWSHHGSRTAE Trigger: TTCGGCTGTTCGTGAGCCGTGATGGCTCCACCACACTGAGCGGCATTCAGCTGGGCAACAGAGTCTCCTCGGGAGTCTACGAGCCAGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CCA 90 bp | CTCCCGAGGAGACTCTGTTGCCCAGCTGAATGCCGCTCAGTGTGGTaGAGCCATCACGGCTCACGAACAGCCGAAGGTTACTGTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPRRLCCPAECRSVW*SHHGSRTAEGYCPQ Trigger: CTGAGGACAGTAACCTTCGGCTGTTCGTGAGCCGTGATGGCTCCACCACACTGAGCGGCATTCAGCTGGGCAACAGAGTCTCCTCGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CCA 90 bp | AGACTCCCGAGGAGACTCTGTTGCCCAGCTGAATGCCGCTCAGTGTaGTGGAGCCATCACGGCTCACGAACAGCCGAAGGTTACTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RLPRRLCCPAECRSV*WSHHGSRTAEGYCP Trigger: AGGACAGTAACCTTCGGCTGTTCGTGAGCCGTGATGGCTCCACCACACTGAGCGGCATTCAGCTGGGCAACAGAGTCTCCTCGGGAGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS-3UTR CAA 90 bp | GGGCAGGGACAATGGAGCAAGTGCCCCGTCAGCCTGGCTGAAGCTGCTGCTCCTTTACTGTCCTCAGTGTaGCTGCCATCAGTGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GQGQWSKCPVSLAEAAAPLLSSV*LPSVKS Trigger: GGACTTCACTGATGGCAGCAACACTGAGGACAGTAA...AGGAGCAGCAGCTTCAGCCAGGCTGACGGGGCACTTGCTCCATTGTCCCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS-3UTR CAA 90 bp | GGGGAAAAGGCCTTTGCTTACCCAGCACGGCTGGGCCTCGTCCTTCCTTTCCTGATGCCAATGGTGACCTaGAGGATGGAGTTGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GEKAFAYPARLGLVLPFLMPMVT*RMELSW Trigger: CCAGGACAACTCCATCCTCAAGGTCACCATTGGCAT...CAGGAAAGGAAGGACGAGGCCCAGCCGTGCTGGGTAAGCAAAGGCCTTTTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS-3UTR CAA 90 bp | AGACCTTGGCTTGAGTTAGGCAGGGGCTCTTGGTTTGGGGCAGTCTTCCTGACAGGGATGGAGATGGATTaGGCGGTAGACGGTGGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: RPWLELGRGSWFGAVFLTGMEMD*AVDGGV Trigger: GACGCCACCGTCTACCGCCAAATCCATCTCCATCCC...TGTCAGGAAGACTGCCCCAAACCAAGAGCCCCTGCCTAACTCAAGCCAAGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CCA 90 bp | TGCTGCTGGTGGATGTATTTCTGCGGTGTGTCAAGTCAGACAGGCTaGAGGAGCGAGAGTGCTCTGTACTGTAGCCAGATAGCTTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: CCWWMYFCGVSSQTG*RSESALYCSQIAWT Trigger: AGTCCAAGCTATCTGGCTACAGTACAGAGCACTCTCGCTCCTCCAGCCTGTCTGACTTGACACACCGCAGAAATACATCCACCAGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS-3UTR CAA 90 bp | GAGGCACCTATCTCCCCTTGTTGGGGTGGAAGGAATACAAGAACTGTGAACTCATGTCATCTACCCAGGTaGGGTGGCTCTCCACAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: EAPISPCWGGRNTRTVNSCHLPR*GGSPQS Trigger: ACTCTGTGGAGAGCCACCCAACCTGGGTAGATGACA...TGAGTTCACAGTTCTTGTATTCCTTCCACCCCAACAAGGGGAGATAGGTGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CCA 90 bp | CTCCACAATGTCGTCTGCATCAATTCGAGTGTCATCTACCCAGGTTaGGTGGCTCTCCACAGAGTCTTTCTTTCGCCGAAAAGAGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: LHNVVCINSSVIYPG*VALHRVFLSPKRAI Trigger: GATCGCTCTTTTCGGCGAAAGAAAGACTCTGTGGAGAGCCACCCAACCTGGGTAGATGACACTCGAATTGATGCAGACGACATTGTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR CAA 90 bp | GAGGCACCTATCTCCCCTTGTTGGGGTGGAAGGAATACAAGAACTGTGAACTCAACCTTGAGGATGGAGTaGTCCTGGCGGGTATTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EAPISPCWGGRNTRTVNSTLRME*SWRVFL Trigger: CAAGAATACCCGCCAGGACAACTCCATCCTCAAGGT...TGAGTTCACAGTTCTTGTATTCCTTCCACCCCAACAAGGGGAGATAGGTGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS TCA 90 bp | TCACGAACAGCCGAAGGTTACTGTCCTCAGTGTTGCTGCCATCAGTaGAGTCCTGGCTCTGCATTATCTTCTCCACAATGTCGTCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SRTAEGYCPQCCCHQ*SPGSALSSPQCRLH Trigger: ATGCAGACGACATTGTGGAGAAGATAATGCAGAGCCAGGACTTCACTGATGGCAGCAACACTGAGGACAGTAACCTTCGGCTGTTCGTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS GCA 90 bp | ATCAGTGAAGTCCTGGCTCTGCATTATCTTCTCCACAATGTCGTCTaGATCAATTCGAGTGTCATCTACCCAGGTTGGGTGGCTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ISEVLALHYLLHNVV*INSSVIYPGWVALH Trigger: GTGGAGAGCCACCCAACCTGGGTAGATGACACTCGAATTGATGCAGACGACATTGTGGAGAAGATAATGCAGAGCCAGGACTTCACTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS-3UTR CAA 90 bp | ACGGAATGGGGTGCAGTGGTAACCTGGTTAGAAAGGAATAACACAAAAGCAAATGATCCAGTTAGGGAATaGGTGCTGCTGCTGCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: TEWGAVVTWLERNNTKANDPVRE*VLLLPP Trigger: CGGTGGCAGCAGCAGCACCAATTCCCTAACTGGATC...ATTTGCTTTTGTGTTATTCCTTTCTAACCAGGTTACCACTGCACCCCATTCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS GCA 72 bp | CCACCGCTGCTGGTCCCACCACCTTTACACGTCAGCTaGAGGGAGGAGTCCTGGCCCGGGATGGAGATGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PPLLVPPPLHVS*REESWPGMEMD Trigger: ATCCATCTCCATCCCGGGCCAGGACTCCTCCCTGCAGCTGACGTGTAAAGGTGGTGGGACCAGCAGCGGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS GCA 72 bp | TTCTCAGGAGGCCGAGGTGGCTTCTCAGAGGGCCGATaGTCCCTCTCCATGCCCTCAGGACCCTCTACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: FSGGRGGFSEGR*SLSMPSGPSTA Trigger: GGCTGTAGAGGGTCCTGAGGGCATGGAGAGGGAGCATCGGCCCTCTGAGAAGCCACCTCGGCCTCCTGAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS CAA 90 bp | CACGTCAGCTGCAGGGAGGAGTCCTGGCCCGGGATGGAGATGGATTaGGCGGTAGACGGTGGCGTCTTGAAACAGGGGTCCCCAGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: HVSCREESWPGMEMD*AVDGGVLKQGSPES Trigger: GCTCTCTGGGGACCCCTGTTTCAAGACGCCACCGTCTACCGCCAAATCCATCTCCATCCCGGGCCAGGACTCCTCCCTGCAGCTGACGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
||
| CDS GCA 72 bp | CACCTTTCAGCTCCTTGCGCACAGACACTCGAAAGATaGAGGGGTCCAGCAGGCCTGTGGCCGGGTTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: HLSAPCAQTLER*RGPAGLWPGWH Trigger: GTGCCAACCCGGCCACAGGCCTGCTGGACCCCTGCATCTTTCGAGTGTCTGTGCGCAAGGAGCTGAAAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CCA 72 bp | TGCGGGAGTGGCCAGAGTGGAACACCTCCTCAGGACTaGACAGGCTCTGGTCTGGCTCCTCTGGTAGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: CGSGQSGTPPQD*TGSGLAPLVVL Trigger: CAGGACTACCAGAGGAGCCAGACCAGAGCCTGTCCAGTCCTGAGGAGGTGTTCCACTCTGGCCACTCCCGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CAA 72 bp | TGCAGGGAGGAGTCCTGGCCCGGGATGGAGATGGATTaGGCGGTAGACGGTGGCGTCTTGAAACAGGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: CREESWPGMEMD*AVDGGVLKQGS Trigger: GGACCCCTGTTTCAAGACGCCACCGTCTACCGCCAAATCCATCTCCATCCCGGGCCAGGACTCCTCCCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CCA 72 bp | CCACCACCTTTACACGTCAGCTGCAGGGAGGAGTCCTaGCCCGGGATGGAGATGGATTTGGCGGTAGACGGT | + |
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Preference number: 6 (lower is better) Translates to: PPPLHVSCREES*PGMEMDLAVDG Trigger: ACCGTCTACCGCCAAATCCATCTCCATCCCGGGCCAGGACTCCTCCCTGCAGCTGACGTGTAAAGGTGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CCA 72 bp | CCAGAGTGGAACACCTCCTCAGGACTGGACAGGCTCTaGTCTGGCTCCTCTGGTAGTCCTGAGCCCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: PEWNTSSGLDRL*SGSSGSPEPRM Trigger: CATCCTGGGCTCAGGACTACCAGAGGAGCCAGACCAGAGCCTGTCCAGTCCTGAGGAGGTGTTCCACTCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CCA 72 bp | AGGAGACTCTGTTGCCCAGCTGAATGCCGCTCAGTGTaGTGGAGCCATCACGGCTCACGAACAGCCGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: RRLCCPAECRSV*WSHHGSRTAEG Trigger: ACCTTCGGCTGTTCGTGAGCCGTGATGGCTCCACCACACTGAGCGGCATTCAGCTGGGCAACAGAGTCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CCA 72 bp | AGACTCTGTTGCCCAGCTGAATGCCGCTCAGTGTGGTaGAGCCATCACGGCTCACGAACAGCCGAAGGTTAC | + |
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Preference number: 6 (lower is better) Translates to: RLCCPAECRSVW*SHHGSRTAEGY Trigger: GTAACCTTCGGCTGTTCGTGAGCCGTGATGGCTCCACCACACTGAGCGGCATTCAGCTGGGCAACAGAGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CCA 72 bp | TGGTGTCGTATCCTTCCAATAGGCAGCAGCGGACGGTaGAGCCTGAGCCTGCAAACTCGGCTAGGTTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: WCRILPIGSSGR*SLSLQTRLGSS Trigger: ACTTGAACCTAGCCGAGTTTGCAGGCTCAGGCTCCACCGTCCGCTGCTGCCTATTGGAAGGATACGACACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CAA 90 bp | ATGCCAATGGTGACCTTGAGGATGGAGTTGTCCTGGCGGGTATTCTaGGTGTCGTATCCTTCCAATAGGCAGCAGCGGACGGTGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: MPMVTLRMELSWRVF*VSYPSNRQQRTVEP Trigger: AGGCTCCACCGTCCGCTGCTGCCTATTGGAAGGATACGACACCAAGAATACCCGCCAGGACAACTCCATCCTCAAGGTCACCATTGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CAA 72 bp | GTGACCTTGAGGATGGAGTTGTCCTGGCGGGTATTCTaGGTGTCGTATCCTTCCAATAGGCAGCAGCGGACG | + |
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Preference number: 6 (lower is better) Translates to: VTLRMELSWRVF*VSYPSNRQQRT Trigger: CGTCCGCTGCTGCCTATTGGAAGGATACGACACCAAGAATACCCGCCAGGACAACTCCATCCTCAAGGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS TCA 72 bp | AGCCTGAGCCTGCAAACTCGGCTAGGTTCAAGTCAGTaGAGCCCAGCTTGGAATACGCCTTCCCACCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: SLSLQTRLGSSQ*SPAWNTPSHLS Trigger: TGAAAGGTGGGAAGGCGTATTCCAAGCTGGGCTTCACTGACTTGAACCTAGCCGAGTTTGCAGGCTCAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CAA 90 bp | TCCCCAGAGAGCAGGAACATGCCAATGGTGACCTTGAGGATGGAGTaGTCCTGGCGGGTATTCTTGGTGTCGTATCCTTCCAATAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SPESRNMPMVTLRME*SWRVFLVSYPSNRQ Trigger: CTGCCTATTGGAAGGATACGACACCAAGAATACCCGCCAGGACAACTCCATCCTCAAGGTCACCATTGGCATGTTCCTGCTCTCTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CAA 72 bp | AGCAGGAACATGCCAATGGTGACCTTGAGGATGGAGTaGTCCTGGCGGGTATTCTTGGTGTCGTATCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SRNMPMVTLRME*SWRVFLVSYPS Trigger: GGAAGGATACGACACCAAGAATACCCGCCAGGACAACTCCATCCTCAAGGTCACCATTGGCATGTTCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CCA 72 bp | TGGATGTATTTCTGCGGTGTGTCAAGTCAGACAGGCTaGAGGAGCGAGAGTGCTCTGTACTGTAGCCAGATA | + |
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Preference number: 6 (lower is better) Translates to: WMYFCGVSSQTG*RSESALYCSQI Trigger: TATCTGGCTACAGTACAGAGCACTCTCGCTCCTCCAGCCTGTCTGACTTGACACACCGCAGAAATACATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS TCA 72 bp | GCCGAAGGTTACTGTCCTCAGTGTTGCTGCCATCAGTaGAGTCCTGGCTCTGCATTATCTTCTCCACAATGT | + |
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Preference number: 6 (lower is better) Translates to: AEGYCPQCCCHQ*SPGSALSSPQC Trigger: ACATTGTGGAGAAGATAATGCAGAGCCAGGACTTCACTGATGGCAGCAACACTGAGGACAGTAACCTTCGGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CCA 72 bp | AACATGCCAATGGTGACCTTGAGGATGGAGTTGTCCTaGCGGGTATTCTTGGTGTCGTATCCTTCCAATAGG | + |
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Preference number: 6 (lower is better) Translates to: NMPMVTLRMELS*RVFLVSYPSNR Trigger: CCTATTGGAAGGATACGACACCAAGAATACCCGCCAGGACAACTCCATCCTCAAGGTCACCATTGGCATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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| CDS CCA 72 bp | TCTGCATCAATTCGAGTGTCATCTACCCAGGTTGGGTaGCTCTCCACAGAGTCTTTCTTTCGCCGAAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: SASIRVSSTQVG*LSTESFFRRKE Trigger: CTCTTTTCGGCGAAAGAAAGACTCTGTGGAGAGCCACCCAACCTGGGTAGATGACACTCGAATTGATGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048375.6 |
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