Pregenerated sensors for FAIML (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096316Ensembl transcript IDs: ENSMUST00000178051.8, ENSMUST00000188555.2
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS-3UTR TCA 90 bp | ACATTTAATTGCCACAGTCATCAGCAAGTTCTGAGGTCACCTCCTCAGCTCAGACACAACTCGTTTGCCTaGTGTGGTCCCATGTTCAAA | + |
Preference number: 4 (lower is better) Translates to: TFNCHSHQQVLRSPPQLRHNSFA*CGPMFK Trigger: TTTGAACATGGGACCACATCAGGCAAACGAGTTGTG...TCTGAGCTGAGGAGGTGACCTCAGAACTTGCTGATGACTGTGGCAATTAAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178051.8 |
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CDS-3UTR CCA 90 bp | TTGCCACAGTCATCAGCAAGTTCTGAGGTCACCTCCTCAGCTCAGAACTCAGTACTCGTTTGCCTGATGTaGTCCCATGTTCAAATTCAA | + |
Preference number: 4 (lower is better) Translates to: LPQSSASSEVTSSAQNSVLVCLM*SHVQIQ Trigger: TTGAATTTGAACATGGGACCACATCAGGCAAACGAG...TACTGAGTTCTGAGCTGAGGAGGTGACCTCAGAACTTGCTGATGACTGTGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178051.8 |
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CDS-3UTR GCA 90 bp | ACATTTAATTGCCACAGTCATCAGCAAGTTCTGAGGTCACCTCCTCAGCTCAGACACAGAAGGTTTCTTTaGCCACTAAAGGGAACATCC | + |
Preference number: 4 (lower is better) Translates to: TFNCHSHQQVLRSPPQLRHRRFL*PLKGTS Trigger: GGATGTTCCCTTTAGTGGGCAAAGAAACCTTCTGTG...TCTGAGCTGAGGAGGTGACCTCAGAACTTGCTGATGACTGTGGCAATTAAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178051.8 |
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CDS-3UTR CCA 90 bp | ACATTTAATTGCCACAGTCATCAGCAAGTTCTGAGGTCACCTCCTCAGCTCAGATCCACAATGAGGGTATaGATAATCCCTTCTCTCTTC | + |
Preference number: 4 (lower is better) Translates to: TFNCHSHQQVLRSPPQLRSTMRV*IIPSLF Trigger: GAAGAGAGAAGGGATTATCCATACCCTCATTGTGGA...TCTGAGCTGAGGAGGTGACCTCAGAACTTGCTGATGACTGTGGCAATTAAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178051.8 |
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CDS-3UTR CCA 90 bp | GATAAGCACACATTGAGCACATTTAATTGCCACAGTCATCAGCAAGTTCTGAGGTCACTGAGTGAGCTCTaGGATTTCCCTGTTATCCAC | + |
Preference number: 4 (lower is better) Translates to: DKHTLSTFNCHSHQQVLRSLSEL*DFPVIH Trigger: GTGGATAACAGGGAAATCCCAGAGCTCACTCAGTGA...CCTCAGAACTTGCTGATGACTGTGGCAATTAAATGTGCTCAATGTGTGCTTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178051.8 |
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CDS TCA 90 bp | TCCCGCTGCTCACGGCTTTTATGTAACAGCCGTGGTTCCCAACGCTaGAGTGCGTCTCAGTCCCGTCATCTACAAACTCGCCCACCGACT | + |
Preference number: 5 (lower is better) Translates to: SRCSRLLCNSRGSQR*SASQSRHLQTRPPT Trigger: AGTCGGTGGGCGAGTTTGTAGATGACGGGACTGAGACGCACTTCAGCGTTGGGAACCACGGCTGTTACATAAAAGCCGTGAGCAGCGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178051.8 ENSMUST00000188555.2 |
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CDS-3UTR CAA 90 bp | CCACAGTCATCAGCAAGTTCTGAGGTCACCTCCTCAGCTCAGAACTCAGTAAGACTAAAACCACAACCTTaGCCAGAAAGTATACGTATG | + |
Preference number: 5 (lower is better) Translates to: PQSSASSEVTSSAQNSVRLKPQP*PESIRM Trigger: CATACGTATACTTTCTGGCAAAGGTTGTGGTTTTAG...TCTTACTGAGTTCTGAGCTGAGGAGGTGACCTCAGAACTTGCTGATGACTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178051.8 |
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CDS TCA 90 bp | TTTTCTTATCACTTCCTTTCCATCCACGTACACAACTCGTTTGCCTaGTGTGGTCCCATGTTCAAATTCAATCTTGTGGACTCCATCACT | + |
Preference number: 5 (lower is better) Translates to: FSYHFLSIHVHNSFA*CGPMFKFNLVDSIT Trigger: AGTGATGGAGTCCACAAGATTGAATTTGAACATGGGACCACATCAGGCAAACGAGTTGTGTACGTGGATGGAAAGGAAGTGATAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178051.8 ENSMUST00000188555.2 |
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CDS GCA 90 bp | ACTCTTTTCTTATCACTTCCTTTCCATCCACGTACACAACTCGTTTaGCTGATGTGGTCCCATGTTCAAATTCAATCTTGTGGACTCCAT | + |
Preference number: 5 (lower is better) Translates to: TLFLSLPFHPRTQLV*LMWSHVQIQSCGLH Trigger: ATGGAGTCCACAAGATTGAATTTGAACATGGGACCACATCAGGCAAACGAGTTGTGTACGTGGATGGAAAGGAAGTGATAAGAAAAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178051.8 ENSMUST00000188555.2 |
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CDS CCA 90 bp | TTATCACTTCCTTTCCATCCACGTACACAACTCGTTTGCCTGATGTaGTCCCATGTTCAAATTCAATCTTGTGGACTCCATCACTTAAAA | + |
Preference number: 5 (lower is better) Translates to: LSLPFHPRTQLVCLM*SHVQIQSCGLHHLK Trigger: TTTTAAGTGATGGAGTCCACAAGATTGAATTTGAACATGGGACCACATCAGGCAAACGAGTTGTGTACGTGGATGGAAAGGAAGTGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178051.8 ENSMUST00000188555.2 |
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CDS CCA 90 bp | ACAACTCGTTTGCCTGATGTGGTCCCATGTTCAAATTCAATCTTGTaGACTCCATCACTTAAAATAACATCCCAGATAGCTGCAATTTTC | + |
Preference number: 5 (lower is better) Translates to: TTRLPDVVPCSNSIL*TPSLKITSQIAAIF Trigger: GAAAATTGCAGCTATCTGGGATGTTATTTTAAGTGATGGAGTCCACAAGATTGAATTTGAACATGGGACCACATCAGGCAAACGAGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178051.8 ENSMUST00000188555.2 |
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CDS-3UTR CAA 90 bp | ATTGATAAGCACACATTGAGCACATTTAATTGCCACAGTCATCAGCAAGTTCTGACAATTCTAAAGTCTTaGTCATCCAAGTGCAATACC | + |
Preference number: 5 (lower is better) Translates to: IDKHTLSTFNCHSHQQVLTILKS*SSKCNT Trigger: GGTATTGCACTTGGATGACAAAGACTTTAGAATTGT...CAGAACTTGCTGATGACTGTGGCAATTAAATGTGCTCAATGTGTGCTTATCAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178051.8 |
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CDS TCA 72 bp | TCACGGCTTTTATGTAACAGCCGTGGTTCCCAACGCTaGAGTGCGTCTCAGTCCCGTCATCTACAAACTCGC | + |
Preference number: 6 (lower is better) Translates to: SRLLCNSRGSQR*SASQSRHLQTR Trigger: GCGAGTTTGTAGATGACGGGACTGAGACGCACTTCAGCGTTGGGAACCACGGCTGTTACATAAAAGCCGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178051.8 ENSMUST00000188555.2 |
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CDS CCA 72 bp | AGCTCTGGGATTTCCCTGTTATCCACAATGAGGGTATaGATAATCCCTTCTCTCTTCTTCCCGCTGCTCACG | + |
Preference number: 6 (lower is better) Translates to: SSGISLLSTMRV*IIPSLFFPLLT Trigger: CGTGAGCAGCGGGAAGAAGAGAGAAGGGATTATCCATACCCTCATTGTGGATAACAGGGAAATCCCAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178051.8 ENSMUST00000188555.2 |
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CDS TCA 72 bp | CACTTCCTTTCCATCCACGTACACAACTCGTTTGCCTaGTGTGGTCCCATGTTCAAATTCAATCTTGTGGAC | + |
Preference number: 6 (lower is better) Translates to: HFLSIHVHNSFA*CGPMFKFNLVD Trigger: GTCCACAAGATTGAATTTGAACATGGGACCACATCAGGCAAACGAGTTGTGTACGTGGATGGAAAGGAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178051.8 ENSMUST00000188555.2 |
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CDS CCA 72 bp | CCTTTCCATCCACGTACACAACTCGTTTGCCTGATGTaGTCCCATGTTCAAATTCAATCTTGTGGACTCCAT | + |
Preference number: 6 (lower is better) Translates to: PFHPRTQLVCLM*SHVQIQSCGLH Trigger: ATGGAGTCCACAAGATTGAATTTGAACATGGGACCACATCAGGCAAACGAGTTGTGTACGTGGATGGAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178051.8 ENSMUST00000188555.2 |
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CDS CAA 90 bp | CACTCTTTTCTTATCACTTCCTTTCCATCCACGTACACAACTCGTTaGCCTGATGTGGTCCCATGTTCAAATTCAATCTTGTGGACTCCA | + |
Preference number: 6 (lower is better) Translates to: HSFLITSFPSTYTTR*PDVVPCSNSILWTP Trigger: TGGAGTCCACAAGATTGAATTTGAACATGGGACCACATCAGGCAAACGAGTTGTGTACGTGGATGGAAAGGAAGTGATAAGAAAAGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178051.8 ENSMUST00000188555.2 |
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CDS CAA 72 bp | CTTATCACTTCCTTTCCATCCACGTACACAACTCGTTaGCCTGATGTGGTCCCATGTTCAAATTCAATCTTG | + |
Preference number: 6 (lower is better) Translates to: LITSFPSTYTTR*PDVVPCSNSIL Trigger: CAAGATTGAATTTGAACATGGGACCACATCAGGCAAACGAGTTGTGTACGTGGATGGAAAGGAAGTGATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178051.8 ENSMUST00000188555.2 |
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CDS GCA 72 bp | TTATCACTTCCTTTCCATCCACGTACACAACTCGTTTaGCTGATGTGGTCCCATGTTCAAATTCAATCTTGT | + |
Preference number: 6 (lower is better) Translates to: LSLPFHPRTQLV*LMWSHVQIQSC Trigger: ACAAGATTGAATTTGAACATGGGACCACATCAGGCAAACGAGTTGTGTACGTGGATGGAAAGGAAGTGATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178051.8 ENSMUST00000188555.2 |
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CDS CAA 90 bp | TACACAACTCGTTTGCCTGATGTGGTCCCATGTTCAAATTCAATCTaGTGGACTCCATCACTTAAAATAACATCCCAGATAGCTGCAATT | + |
Preference number: 6 (lower is better) Translates to: YTTRLPDVVPCSNSI*WTPSLKITSQIAAI Trigger: AATTGCAGCTATCTGGGATGTTATTTTAAGTGATGGAGTCCACAAGATTGAATTTGAACATGGGACCACATCAGGCAAACGAGTTGTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178051.8 ENSMUST00000188555.2 |
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CDS CCA 72 bp | TTGCCTGATGTGGTCCCATGTTCAAATTCAATCTTGTaGACTCCATCACTTAAAATAACATCCCAGATAGCT | + |
Preference number: 6 (lower is better) Translates to: LPDVVPCSNSIL*TPSLKITSQIA Trigger: AGCTATCTGGGATGTTATTTTAAGTGATGGAGTCCACAAGATTGAATTTGAACATGGGACCACATCAGGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178051.8 ENSMUST00000188555.2 |
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CDS CAA 72 bp | CGTTTGCCTGATGTGGTCCCATGTTCAAATTCAATCTaGTGGACTCCATCACTTAAAATAACATCCCAGATA | + |
Preference number: 6 (lower is better) Translates to: RLPDVVPCSNSI*WTPSLKITSQI Trigger: TATCTGGGATGTTATTTTAAGTGATGGAGTCCACAAGATTGAATTTGAACATGGGACCACATCAGGCAAACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178051.8 ENSMUST00000188555.2 |