Pregenerated sensors for FAF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025873Ensembl transcript IDs: ENSMUST00000026991.16, ENSMUST00000124752.2, ENSMUST00000126071.9, ENSMUST00000135015.2, ENSMUST00000137413.8, ENSMUST00000153894.2
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTCTGGGACCACCTGGAGAGGAACAGTGGCAAAGGATGCGCAAATaGGCCCAGGGCACCTTTATTACGCGGCCCCGGCCTCGCCTCGGA | + |
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Preference number: 1 (lower is better) Translates to: TLGPPGEEQWQRMRK*AQGTFITRPRPRLG Trigger: TCCGAGGCGAGGCCGGGGCCGCGTAATAAAGGTGCCCTGGGCTCATTTGCGCATCCTTTGCCACTGTTCCTCTCCAGGTGGTCCCAGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR GCA 90 bp | AAGGTGGCAGTCCCTGCTCAGCGCCAGGCGACCCCTCTGATTATGTaGTCTGGGGGCTACTGCTCCTTCTCAGTCACCTCCCGACATTCT | + |
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Preference number: 1 (lower is better) Translates to: KVAVPAQRQATPLIM*SGGYCSFSVTSRHS Trigger: AGAATGTCGGGAGGTGACTGAGAAGGAGCAGTAGCCCCCAGAGCACATAATCAGAGGGGTCGCCTGGCGCTGAGCAGGGACTGCCACCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR CCA 90 bp | CACATGCCCATGTGCCAGGCAGACAGACAGGCAGGGACTACAATCTaGGAGGGAGGCTCTGGGAGTGGGGAAGTCCCTCTGCATCACTGT | + |
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Preference number: 1 (lower is better) Translates to: HMPMCQADRQAGTTI*EGGSGSGEVPLHHC Trigger: ACAGTGATGCAGAGGGACTTCCCCACTCCCAGAGCCTCCCTCCCAGATTGTAGTCCCTGCCTGTCTGTCTGCCTGGCACATGGGCATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR CCA 90 bp | GGCAGTCCCTGCTCAGCGCCAGGCGACCCCTCTGATTATGTGCTCTaGGGGCTACTGCTCCTTCTCAGTCACCTCCCGACATTCTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: GSPCSAPGDPSDYVL*GLLLLLSHLPTFFP Trigger: AGGAAAGAATGTCGGGAGGTGACTGAGAAGGAGCAGTAGCCCCCAGAGCACATAATCAGAGGGGTCGCCTGGCGCTGAGCAGGGACTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR GCA 90 bp | CGAGTCTGCTGTCTGCCGAGCAGGCAATGCTCACTGCTGACCTTCTaGACACGGATGCACGCAGGTTGTGACTCTTGCAGGCAGCATGGT | + |
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Preference number: 1 (lower is better) Translates to: RVCCLPSRQCSLLTF*TRMHAGCDSCRQHG Trigger: ACCATGCTGCCTGCAAGAGTCACAACCTGCGTGCATCCGTGTGCAGAAGGTCAGCAGTGAGCATTGCCTGCTCGGCAGACAGCAGACTCG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
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| 3UTR CCA 90 bp | CCAGGCAGACAGACAGGCAGGGACTACAATCTGGGAGGGAGGCTCTaGGAGTGGGGAAGTCCCTCTGCATCACTGTCAGCAAGACAGACT | + |
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Preference number: 1 (lower is better) Translates to: PGRQTGRDYNLGGRL*EWGSPSASLSARQT Trigger: AGTCTGTCTTGCTGACAGTGATGCAGAGGGACTTCCCCACTCCCAGAGCCTCCCTCCCAGATTGTAGTCCCTGCCTGTCTGTCTGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR CCA 90 bp | CTCCTGCTGCTTCACCACGGCAAGAGCAAGGCTGCAAACTGTCTCTaGTACCACGGAATGTGCTTTCCAACACACATGGGCTGGGAGGCC | + |
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Preference number: 1 (lower is better) Translates to: LLLLHHGKSKAANCL*YHGMCFPTHMGWEA Trigger: GGCCTCCCAGCCCATGTGTGTTGGAAAGCACATTCCGTGGTACCAGAGACAGTTTGCAGCCTTGCTCTTGCCGTGGTGAAGCAGCAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR CCA 90 bp | AGACAGACAGGCAGGGACTACAATCTGGGAGGGAGGCTCTGGGAGTaGGGAAGTCCCTCTGCATCACTGTCAGCAAGACAGACTTCATCT | + |
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Preference number: 1 (lower is better) Translates to: RQTGRDYNLGGRLWE*GSPSASLSARQTSS Trigger: AGATGAAGTCTGTCTTGCTGACAGTGATGCAGAGGGACTTCCCCACTCCCAGAGCCTCCCTCCCAGATTGTAGTCCCTGCCTGTCTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR CCA 90 bp | AAGAGCAGCAGTACAGCCAGAGGGGAACCAGGAGCTGCTAGCCTTTaGTTCAGACCCCTTTACCACCACCTGGTACAGATGCCAAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: KSSSTARGEPGAASL*FRPLYHHLVQMPRK Trigger: TTTCCTTGGCATCTGTACCAGGTGGTGGTAAAGGGGTCTGAACCAAAGGCTAGCAGCTCCTGGTTCCCCTCTGGCTGTACTGCTGCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR GCA 90 bp | CACGGCAAGAGCAAGGCTGCAAACTGTCTCTGGTACCACGGAATGTaGTTTCCAACACACATGGGCTGGGAGGCCAACTTCTCTTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: HGKSKAANCLWYHGM*FPTHMGWEANFSFK Trigger: TTTGAAAGAGAAGTTGGCCTCCCAGCCCATGTGTGTTGGAAAGCACATTCCGTGGTACCAGAGACAGTTTGCAGCCTTGCTCTTGCCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR TCA 90 bp | TGCTCCAAATGGGATACACAAGTGGCAGAACTGTACCAAACCAAATaGCCACTCTGGGACCACCTGGAGAGGAACAGTGGCAAAGGATGC | + |
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Preference number: 1 (lower is better) Translates to: CSKWDTQVAELYQTK*PLWDHLERNSGKGC Trigger: GCATCCTTTGCCACTGTTCCTCTCCAGGTGGTCCCAGAGTGGTCATTTGGTTTGGTACAGTTCTGCCACTTGTGTATCCCATTTGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR GCA 90 bp | CTGCTAGCCTTTGGTTCAGACCCCTTTACCACCACCTGGTACAGATaGCAAGGAAAAGCTGTACTTGTGTGTAAAGGTGAGCACACACCC | + |
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Preference number: 1 (lower is better) Translates to: LLAFGSDPFTTTWYR*QGKAVLVCKGEHTP Trigger: GGGTGTGTGCTCACCTTTACACACAAGTACAGCTTTTCCTTGGCATCTGTACCAGGTGGTGGTAAAGGGGTCTGAACCAAAGGCTAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR CCA 90 bp | AACCAGGAGCTGCTAGCCTTTGGTTCAGACCCCTTTACCACCACCTaGTACAGATGCCAAGGAAAAGCTGTACTTGTGTGTAAAGGTGAG | + |
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Preference number: 1 (lower is better) Translates to: NQELLAFGSDPFTTT*YRCQGKAVLVCKGE Trigger: CTCACCTTTACACACAAGTACAGCTTTTCCTTGGCATCTGTACCAGGTGGTGGTAAAGGGGTCTGAACCAAAGGCTAGCAGCTCCTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR CCA 90 bp | AGCAGACCTAGGTACAGCAAGAAAACTGAAGTGTTTCACAGCTACTaGCAAGCCTATGCAGTGGTGCATACCCACATGCCCACTACAGGA | + |
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Preference number: 1 (lower is better) Translates to: SRPRYSKKTEVFHSY*QAYAVVHTHMPTTG Trigger: TCCTGTAGTGGGCATGTGGGTATGCACCACTGCATAGGCTTGCCAGTAGCTGTGAAACACTTCAGTTTTCTTGCTGTACCTAGGTCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR CCA 90 bp | GTACTTGTGTGTAAAGGTGAGCACACACCCACACACAGCCTTTTGTaGGTCACAATCCGAGACTTCCTCTCATTGCTCCAAATGGGATAC | + |
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Preference number: 1 (lower is better) Translates to: VLVCKGEHTPTHSLL*VTIRDFLSLLQMGY Trigger: GTATCCCATTTGGAGCAATGAGAGGAAGTCTCGGATTGTGACCCACAAAAGGCTGTGTGTGGGTGTGTGCTCACCTTTACACACAAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR GCA 90 bp | CCACACACAGCCTTTTGTGGGTCACAATCCGAGACTTCCTCTCATTaGTCCAAATGGGATACACAAGTGGCAGAACTGTACCAAACCAAA | + |
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Preference number: 1 (lower is better) Translates to: PHTAFCGSQSETSSH*SKWDTQVAELYQTK Trigger: TTTGGTTTGGTACAGTTCTGCCACTTGTGTATCCCATTTGGAGCAATGAGAGGAAGTCTCGGATTGTGACCCACAAAAGGCTGTGTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR TCA 90 bp | AGAAAGAGATTAAGAGGGAGAAATCAGAATTTCTCCAAGCAGCTGTaGACAAGATACGTTCACAGTCCACATGCCCATGTGCCAGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: RKRLRGRNQNFSKQL*TRYVHSPHAHVPGR Trigger: TCTGCCTGGCACATGGGCATGTGGACTGTGAACGTATCTTGTTCACAGCTGCTTGGAGAAATTCTGATTTCTCCCTCTTAATCTCTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR-3UTR GCA 90 bp | AGGCCAAGCATCCACAGGTGGAGCGGTGGGCCCGGGAAGGGGCCGCTAGTCCTCCAGGTCCTCAGGAGCTaGTGCTGGAGGGTTTCATTT | + |
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Preference number: 2 (lower is better) Translates to: RPSIHRWSGGPGKGPLVLQVLRS*CWRVSF Trigger: AAATGAAACCCTCCAGCAGCAGCTCCTGAGGACCTG...GAGGACTAGCGGCCCCTTCCCGGGCCCACCGCTCCACCTGTGGATGCTTGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR-3UTR GCA 90 bp | CCCACGAGGGCCGCCGTCTCTTCACTGTGGGAAGGCGAGTCTGCTGTCTGCCGACCTTCTGCACACGGATaGACGCAGGTTGTGACTCTT | + |
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Preference number: 2 (lower is better) Translates to: PTRAAVSSLWEGESAVCRPSAHG*TQVVTL Trigger: AAGAGTCACAACCTGCGTGCATCCGTGTGCAGAAGG...TCGGCAGACAGCAGACTCGCCTTCCCACAGTGAAGAGACGGCGGCCCTCGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
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| 3UTR-3UTR TCA 90 bp | TTCCGGGCTCTCCTCCCTTCCTCCACAAGTGGGAGGAACAGGTCCTCAGGAGCTGATGCACGCAGGTTGTaGCTCTTGCAGGCAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: FRALLPSSTSGRNRSSGADARRL*LLQAAW Trigger: CCATGCTGCCTGCAAGAGTCACAACCTGCGTGCATC...AGCTCCTGAGGACCTGTTCCTCCCACTTGTGGAGGAAGGGAGGAGAGCCCGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
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| 3UTR-3UTR CCA 90 bp | TTGGTGAGTGAGGGGAGCTGGGAAGAGCAGCAGTACAGCCAGAGGGGAACCAGGCTCAGGAGCTGCTGCTaGAGGGTTTCATTTGTACTT | + |
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Preference number: 2 (lower is better) Translates to: LVSEGSWEEQQYSQRGTRLRSCC*RVSFVL Trigger: AAGTACAAATGAAACCCTCCAGCAGCAGCTCCTGAG...CCTGGTTCCCCTCTGGCTGTACTGCTGCTCTTCCCAGCTCCCCTCACTCACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR-3UTR CCA 90 bp | TTAACTACTCAGGTGCAGTACAGGAGGGGCACTGCATCTCTTGTGGATGCATGTCTGGGAGGGAGGCTCTaGGAGTGGGGAAGTCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: LTTQVQYRRGTASLVDACLGGRL*EWGSPS Trigger: AGAGGGACTTCCCCACTCCCAGAGCCTCCCTCCCAG...ACATGCATCCACAAGAGATGCAGTGCCCCTCCTGTACTGCACCTGAGTAGTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR-3UTR TCA 90 bp | TTAACTACTCAGGTGCAGTACAGGAGGGGCACTGCATCTCTTGTGGATGCATGTAGGCACCAAGCTTGGTaGGTGAGGGGAGCTGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LTTQVQYRRGTASLVDACRHQAW*VRGAGK Trigger: CTTCCCAGCTCCCCTCACTCACCAAGCTTGGTGCCT...ACATGCATCCACAAGAGATGCAGTGCCCCTCCTGTACTGCACCTGAGTAGTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGTAGGCTTCATCCTGCTGTTGTCTCAGCACCTGGGTTTGGTTCCTTTCTTCTTCTCCCGTAAGGCCTaGGACACCCTGTACCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: QVGFILLLSQHLGLVPFFFSRKA*DTLYPS Trigger: TGAGGGGTACAGGGTGTCCCAGGCCTTACGGGAGAA...GAAGAAAGGAACCAAACCCAGGTGCTGAGACAACAGCAGGATGAAGCCTACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153894.2 |
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| 3UTR CAA 90 bp | AGGTGCAGTACAGGAGGGGCACTGCATCTCTTGTGGATGCATGTTTaGTTGCTGCGTTCTCCCCGAGACAAACAGAGAAGCCAACCAGCT | + |
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Preference number: 2 (lower is better) Translates to: RCSTGGALHLLWMHV*LLRSPRDKQRSQPA Trigger: AGCTGGTTGGCTTCTCTGTTTGTCTCGGGGAGAACGCAGCAACAAAACATGCATCCACAAGAGATGCAGTGCCCCTCCTGTACTGCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR-3UTR TCA 90 bp | ACTGCATCTCTTGTGGATGCATGTTTTGTTGCTGCGTTCTCCCCGAGACAAACAACCAAGCTTGGTGAGTaGGGGGAGCTGGGAAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: TASLVDACFVAAFSPRQTTKLGE*GELGRA Trigger: TGCTCTTCCCAGCTCCCCTCACTCACCAAGCTTGGT...TGTTTGTCTCGGGGAGAACGCAGCAACAAAACATGCATCCACAAGAGATGCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR-3UTR GCA 90 bp | AGGTGCAGTACAGGAGGGGCACTGCATCTCTTGTGGATGCATGTTTTGTTGCTGTGGTGCATACCCACATaGCCACTACAGGAACCAGGA | + |
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Preference number: 2 (lower is better) Translates to: RCSTGGALHLLWMHVLLLWCIPT*PLQEPG Trigger: TCCTGGTTCCTGTAGTGGGCATGTGGGTATGCACCA...CAGCAACAAAACATGCATCCACAAGAGATGCAGTGCCCCTCCTGTACTGCACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR-3UTR TCA 90 bp | CTCCAAATGGGATACACAAGTGGCAGAACTGTACCAAACCAAATGACCACTCTGGATGCACGCAGGTTGTaGCTCTTGCAGGCAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: LQMGYTSGRTVPNQMTTLDARRL*LLQAAW Trigger: CCATGCTGCCTGCAAGAGTCACAACCTGCGTGCATC...CAGAGTGGTCATTTGGTTTGGTACAGTTCTGCCACTTGTGTATCCCATTTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR-3UTR GCA 90 bp | TCCTTCTCAGTCACCTCCCGACATTCTTTCCTTGGCCTTGGCACCATTAGCAATGTGGGGAAGTCCCTCTaGATCACTGTCAGCAAGACA | + |
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Preference number: 2 (lower is better) Translates to: SFSVTSRHSFLGLGTISNVGKSL*ITVSKT Trigger: TGTCTTGCTGACAGTGATGCAGAGGGACTTCCCCAC...ATTGCTAATGGTGCCAAGGCCAAGGAAAGAATGTCGGGAGGTGACTGAGAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGGACAAAATGTGAAGTCCACAGTTCACCCAGGGAGAGAAATGGCACCCAGAAATGACTGCGAACAGTaGGAATGTCTCCTTCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: QGQNVKSTVHPGREMAPRNDCEQ*ECLLPH Trigger: GTGGGGAAGGAGACATTCCCACTGTTCGCAGTCATT...TCTGGGTGCCATTTCTCTCCCTGGGTGAACTGTGGACTTCACATTTTGTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR-3UTR CCA 90 bp | CTCCAAATGGGATACACAAGTGGCAGAACTGTACCAAACCAAATGACCACTCTGCCCTTCCTCCACAAGTaGGAGGAACAGGTCCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: LQMGYTSGRTVPNQMTTLPFLHK*EEQVLR Trigger: CCTGAGGACCTGTTCCTCCCACTTGTGGAGGAAGGG...CAGAGTGGTCATTTGGTTTGGTACAGTTCTGCCACTTGTGTATCCCATTTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR-3UTR CCA 90 bp | CTGTCAGCAAGACAGACTTCATCTGAGGGTCCTCTCAACCTCACTGTAGTGCCACGGAGCCCAGGGCATTaGCTCTTATCAAATCTAAGG | + |
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Preference number: 2 (lower is better) Translates to: LSARQTSSEGPLNLTVVPRSPGH*LLSNLR Trigger: CCTTAGATTTGATAAGAGCCAATGCCCTGGGCTCCG...TGGCACTACAGTGAGGTTGAGAGGACCCTCAGATGAAGTCTGTCTTGCTGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR-3UTR CCA 90 bp | GCTGCAAACTGTCTCTGGTACCACGGAATGTGCTTTCCAACACACATGGGCTGGCCCTTTACCACCACCTaGTACAGATGCCAAGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: AANCLWYHGMCFPTHMGWPFTTT*YRCQGK Trigger: TTTTCCTTGGCATCTGTACCAGGTGGTGGTAAAGGG...CCAGCCCATGTGTGTTGGAAAGCACATTCCGTGGTACCAGAGACAGTTTGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCTCAGTCACCTCCCGACATTCTTTCCTTGGCCTTGGCACCATTAGCAATCCAACACACATGGGCTaGGAGGCCAACTTCTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: SFSVTSRHSFLGLGTISNPTHMG*EANFSF Trigger: GAAAGAGAAGTTGGCCTCCCAGCCCATGTGTGTTGG...ATTGCTAATGGTGCCAAGGCCAAGGAAAGAATGTCGGGAGGTGACTGAGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR CAA 90 bp | GACAGAAGCACAGGACTATTAGAGAGCAGTGGCTTTAGAGGGCTCTaGGAGGTGACCAACACAAGCTATGCTTTCTCTCGACTGGAATGC | + |
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Preference number: 2 (lower is better) Translates to: DRSTGLLESSGFRGL*EVTNTSYAFSRLEC Trigger: GCATTCCAGTCGAGAGAAAGCATAGCTTGTGTTGGTCACCTCCAAGAGCCCTCTAAAGCCACTGCTCTCTAATAGTCCTGTGCTTCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR-3UTR GCA 90 bp | AAAACACTTGGTACACCTTCCTGCTCATTCAGTCTGTCCTGGACAGCAGCCTCCATGTTCCAGTTATGCTaGTCCAAAGCAAGGCGACAC | + |
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Preference number: 2 (lower is better) Translates to: KTLGTPSCSFSLSWTAASMFQLC*SKARRH Trigger: GTGTCGCCTTGCTTTGGAGCAGCATAACTGGAACAT...GGAGGCTGCTGTCCAGGACAGACTGAATGAGCAGGAAGGTGTACCAAGTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135015.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCTCAGTCACCTCCCGACATTCTTTCCTTGGCCTTGGCACCATTAGCAATCTCTGTAGACCAGGCTaGCCTGGAATTCAGAGATCT | + |
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Preference number: 2 (lower is better) Translates to: SFSVTSRHSFLGLGTISNLCRPG*PGIQRS Trigger: AGATCTCTGAATTCCAGGCCAGCCTGGTCTACAGAG...ATTGCTAATGGTGCCAAGGCCAAGGAAAGAATGTCGGGAGGTGACTGAGAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR CAA 90 bp | CCCACACACAGCCTTTTGTGGGTCACAATCCGAGACTTCCTCTCATaGCTCCAAATGGGATACACAAGTGGCAGAACTGTACCAAACCAA | + |
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Preference number: 2 (lower is better) Translates to: PTHSLLWVTIRDFLS*LQMGYTSGRTVPNQ Trigger: TTGGTTTGGTACAGTTCTGCCACTTGTGTATCCCATTTGGAGCAATGAGAGGAAGTCTCGGATTGTGACCCACAAAAGGCTGTGTGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR-3UTR GCA 90 bp | AACAAGATACGTTCACAGTCCACATGCCCATGTGCCAGGCAGACAGACAGGCAGGAGACTTCCTCTCATTaGTCCAAATGGGATACACAA | + |
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Preference number: 2 (lower is better) Translates to: NKIRSQSTCPCARQTDRQETSSH*SKWDTQ Trigger: TTGTGTATCCCATTTGGAGCAATGAGAGGAAGTCTC...CTGCCTGTCTGTCTGCCTGGCACATGGGCATGTGGACTGTGAACGTATCTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR CAA 90 bp | CTGGGGGCTACTGCTCCTTCTCAGTCACCTCCCGACATTCTTTCCTaGGCCTTGGCACCATTAGCAATTTTCATAATAACTCATCAGTTG | + |
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Preference number: 2 (lower is better) Translates to: LGATAPSQSPPDILS*ALAPLAIFIITHQL Trigger: CAACTGATGAGTTATTATGAAAATTGCTAATGGTGCCAAGGCCAAGGAAAGAATGTCGGGAGGTGACTGAGAAGGAGCAGTAGCCCCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR-3UTR CCA 90 bp | TGGATGCATGTTTTGTTGCTGCGTTCTCCCCGAGACAAACAGAGAAGCCAACCATCAGCCTCATTCCTTTaGTCATTATCATTACAAAGC | + |
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Preference number: 2 (lower is better) Translates to: WMHVLLLRSPRDKQRSQPSASFL*SLSLQS Trigger: GCTTTGTAATGATAATGACCAAAGGAATGAGGCTGA...TGGTTGGCTTCTCTGTTTGTCTCGGGGAGAACGCAGCAACAAAACATGCATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR CAA 90 bp | GCTACTGCTCCTTCTCAGTCACCTCCCGACATTCTTTCCTTGGCCTaGGCACCATTAGCAATTTTCATAATAACTCATCAGTTGGAAATT | + |
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Preference number: 2 (lower is better) Translates to: ATAPSQSPPDILSLA*APLAIFIITHQLEI Trigger: AATTTCCAACTGATGAGTTATTATGAAAATTGCTAATGGTGCCAAGGCCAAGGAAAGAATGTCGGGAGGTGACTGAGAAGGAGCAGTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR-3UTR GCA 90 bp | GACTTGACTTTGGAACAACTGGCAGAATATTTTGGAAGCAATTTAAGCAATAGCCCTTCTGCACACGGATaGACGCAGGTTGTGACTCTT | + |
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Preference number: 2 (lower is better) Translates to: DLTLEQLAEYFGSNLSNSPSAHG*TQVVTL Trigger: AAGAGTCACAACCTGCGTGCATCCGTGTGCAGAAGG...GCTATTGCTTAAATTGCTTCCAAAATATTCTGCCAGTTGTTCCAAAGTCAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGCAGAATATTTTGGAAGCAATTTAAGCAATAGCAAATGGTCACAGGTGTCTAGTCACAGACTGAACTaGCCTCAGGGACAAAATGTG | + |
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Preference number: 2 (lower is better) Translates to: LAEYFGSNLSNSKWSQVSSHRLN*PQGQNV Trigger: CACATTTTGTCCCTGAGGCCAGTTCAGTCTGTGACT...AGACACCTGTGACCATTTGCTATTGCTTAAATTGCTTCCAAAATATTCTGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR CAA 90 bp | GGGGCAGAACTGGAAATAAATCCTTCCATTGTCCATGACTTGACTTaGGAACAACTGGCAGAATATTTTGGAAGCAATTTAAGCAATAGC | + |
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Preference number: 2 (lower is better) Translates to: GAELEINPSIVHDLT*EQLAEYFGSNLSNS Trigger: GCTATTGCTTAAATTGCTTCCAAAATATTCTGCCAGTTGTTCCAAAGTCAAGTCATGGACAATGGAAGGATTTATTTCCAGTTCTGCCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| 3UTR CCA 72 bp | TGGAGCGGTGGGCCCGGGAAGGGGCCGCTAGTCCTCTaGAAGGCACCAAGCTTGGTGAGTGAGGGGAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: WSGGPGKGPLVL*KAPSLVSEGSW Trigger: CCAGCTCCCCTCACTCACCAAGCTTGGTGCCTTCCAGAGGACTAGCGGCCCCTTCCCGGGCCCACCGCTCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR CCA 72 bp | GCACTGAAGCAGGCCAAGCATCCACAGGTGGAGCGGTaGGCCCGGGAAGGGGCCGCTAGTCCTCTGGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: ALKQAKHPQVER*AREGAASPLEG Trigger: GCCTTCCAGAGGACTAGCGGCCCCTTCCCGGGCCCACCGCTCCACCTGTGGATGCTTGGCCTGCTTCAGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR GCA 72 bp | GTCCCTGCTCAGCGCCAGGCGACCCCTCTGATTATGTaGTCTGGGGGCTACTGCTCCTTCTCAGTCACCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VPAQRQATPLIM*SGGYCSFSVTS Trigger: GGAGGTGACTGAGAAGGAGCAGTAGCCCCCAGAGCACATAATCAGAGGGGTCGCCTGGCGCTGAGCAGGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR TCA 72 bp | CCACCTGGAGAGGAACAGTGGCAAAGGATGCGCAAATaGGCCCAGGGCACCTTTATTACGCGGCCCCGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PPGEEQWQRMRK*AQGTFITRPRP Trigger: AGGCCGGGGCCGCGTAATAAAGGTGCCCTGGGCTCATTTGCGCATCCTTTGCCACTGTTCCTCTCCAGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR GCA 72 bp | GTGGGAAGGCGAGTCTGCTGTCTGCCGAGCAGGCAATaGTCACTGCTGACCTTCTGCACACGGATGCACGCA | + |
|
Preference number: 3 (lower is better) Translates to: VGRRVCCLPSRQ*SLLTFCTRMHA Trigger: TGCGTGCATCCGTGTGCAGAAGGTCAGCAGTGAGCATTGCCTGCTCGGCAGACAGCAGACTCGCCTTCCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| 3UTR CCA 72 bp | GGCAGGGACTACAATCTGGGAGGGAGGCTCTGGGAGTaGGGAAGTCCCTCTGCATCACTGTCAGCAAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: GRDYNLGGRLWE*GSPSASLSARQ Trigger: CTGTCTTGCTGACAGTGATGCAGAGGGACTTCCCCACTCCCAGAGCCTCCCTCCCAGATTGTAGTCCCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCAAGCATCCACAGGTGGAGCGGTGGGCCCGGGAAGGGGCCGCTAGTCCTCAAGGAAAAGCTGTACTaGTGTGTAAAGGTGAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: RPSIHRWSGGPGKGPLVLKEKLY*CVKVST Trigger: TGTGCTCACCTTTACACACAAGTACAGCTTTTCCTT...GAGGACTAGCGGCCCCTTCCCGGGCCCACCGCTCCACCTGTGGATGCTTGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR GCA 72 bp | CTCTGGGACCACCTGGAGAGGAACAGTGGCAAAGGATaGGCAAATGAGCCCAGGGCACCTTTATTACGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: LWDHLERNSGKG*ANEPRAPLLRG Trigger: GCCGCGTAATAAAGGTGCCCTGGGCTCATTTGCGCATCCTTTGCCACTGTTCCTCTCCAGGTGGTCCCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR GCA 72 bp | GCTACTGGCAAGCCTATGCAGTGGTGCATACCCACATaGCCACTACAGGAACCAGGAGCAGGAGGGGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: ATGKPMQWCIPT*PLQEPGAGGEF Trigger: GAACTCCCCTCCTGCTCCTGGTTCCTGTAGTGGGCATGTGGGTATGCACCACTGCATAGGCTTGCCAGTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR GCA 72 bp | ACCAGCCGAGCTAGTCCACACTGGAATACTTATCAGTaGGCGCTGGCATGTGGGAGCACGTGGATCAACCAC | + |
|
Preference number: 3 (lower is better) Translates to: TSRASPHWNTYQ*ALACGSTWINH Trigger: GTGGTTGATCCACGTGCTCCCACATGCCAGCGCGCACTGATAAGTATTCCAGTGTGGACTAGCTCGGCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR GCA 72 bp | AGCAAGGCTGCAAACTGTCTCTGGTACCACGGAATGTaGTTTCCAACACACATGGGCTGGGAGGCCAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: SKAANCLWYHGM*FPTHMGWEANF Trigger: GAAGTTGGCCTCCCAGCCCATGTGTGTTGGAAAGCACATTCCGTGGTACCAGAGACAGTTTGCAGCCTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR GCA 72 bp | CAAGCAGCTGTGAACAAGATACGTTCACAGTCCACATaGCCATGTGCCAGGCAGACAGACAGGCAGGGACTA | + |
|
Preference number: 3 (lower is better) Translates to: QAAVNKIRSQST*PCARQTDRQGL Trigger: TAGTCCCTGCCTGTCTGTCTGCCTGGCACATGGGCATGTGGACTGTGAACGTATCTTGTTCACAGCTGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR CCA 72 bp | AGGCCAGTCTTGGGTGTGGAGAGTTTGAGGCCACTTTaGGCCATCAGAACCTCTCTCAAAACTAAGGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RPVLGVESLRPL*AIRTSLKTKGG Trigger: CCCTCCCTTAGTTTTGAGAGAGGTTCTGATGGCCCAAAGTGGCCTCAAACTCTCCACACCCAAGACTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCATCTCTTGTGGATGCATGTTTTGTTGCTGCGTTCTCCCCGAGACAAACATGGAAGGCACCAAGCTaGGTGAGTGAGGGGAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TASLVDACFVAAFSPRQTWKAPS*VSEGSW Trigger: CCAGCTCCCCTCACTCACCAAGCTTGGTGCCTTCCA...TGTTTGTCTCGGGGAGAACGCAGCAACAAAACATGCATCCACAAGAGATGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR TCA 72 bp | TGGGATACACAAGTGGCAGAACTGTACCAAACCAAATaGCCACTCTGGGACCACCTGGAGAGGAACAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: WDTQVAELYQTK*PLWDHLERNSG Trigger: GCCACTGTTCCTCTCCAGGTGGTCCCAGAGTGGTCATTTGGTTTGGTACAGTTCTGCCACTTGTGTATCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR TCA 72 bp | AGGGGAGTTCAAGGCCAGTCTTGGGTGTGGAGAGTTTaGGGCCACTTTGGGCCATCAGAACCTCTCTCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RGVQGQSWVWRV*GHFGPSEPLSK Trigger: TTTTGAGAGAGGTTCTGATGGCCCAAAGTGGCCTCAAACTCTCCACACCCAAGACTGGCCTTGAACTCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR GCA 72 bp | GGGCACTGCATCTCTTGTGGATGCATGTTTTGTTGCTaGGTTCTCCCCGAGACAAACAGAGAAGCCAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: GHCISCGCMFCC*VLPETNREANQ Trigger: CTGGTTGGCTTCTCTGTTTGTCTCGGGGAGAACGCAGCAACAAAACATGCATCCACAAGAGATGCAGTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR CCA 72 bp | ACACTTGGTACACCTTCCTGCTCATTCAGTCTGTCCTaGACAGCAGCCTCCATGTTCCAGTTATGCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TLGTPSCSFSLS*TAASMFQLCCS Trigger: GGAGCAGCATAACTGGAACATGGAGGCTGCTGTCCAGGACAGACTGAATGAGCAGGAAGGTGTACCAAGTGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135015.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGTAGGCTTCATCCTGCTGTTGTCTCAGCACCTGGGTTTGGTTCCTTTCTTCCTGTACCCCTCAGGCTaGTTTGTAGAACAAGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QVGFILLLSQHLGLVPFFLYPSG*FVEQAQ Trigger: CTGGGCTTGTTCTACAAACAAGCCTGAGGGGTACAG...GAAGAAAGGAACCAAACCCAGGTGCTGAGACAACAGCAGGATGAAGCCTACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153894.2 |
||
| 3UTR CCA 72 bp | AACTGTACCAAACCAAATGACCACTCTGGGACCACCTaGAGAGGAACAGTGGCAAAGGATGCGCAAATGAGC | + |
|
Preference number: 3 (lower is better) Translates to: NCTKPNDHSGTT*RGTVAKDAQMS Trigger: GCTCATTTGCGCATCCTTTGCCACTGTTCCTCTCCAGGTGGTCCCAGAGTGGTCATTTGGTTTGGTACAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR CCA 72 bp | TGGTACCACGGAATGTGCTTTCCAACACACATGGGCTaGGAGGCCAACTTCTCTTTCAAAGTTCCTGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: WYHGMCFPTHMG*EANFSFKVPGS Trigger: TGAGCCAGGAACTTTGAAAGAGAAGTTGGCCTCCCAGCCCATGTGTGTTGGAAAGCACATTCCGTGGTACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR GCA 72 bp | CTCCACAAGTGGGAGGAACAGGTCCTCAGGAGCTGCTaGTGGAGGGTTTCATTTGTACTTTCTACAAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LHKWEEQVLRSC*WRVSFVLSTKA Trigger: TGCTTTTGTAGAAAGTACAAATGAAACCCTCCAGCAGCAGCTCCTGAGGACCTGTTCCTCCCACTTGTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| 3UTR GCA 72 bp | ATCTGCTGCCTCTGCCTCTCAGTGCACCTCCATGTCTaGAATGGGTCTATCCTTAGACACTGTTATCACACT | + |
|
Preference number: 3 (lower is better) Translates to: ICCLCLSVHLHV*NGSILRHCYHT Trigger: AGTGTGATAACAGTGTCTAAGGATAGACCCATTGCAGACATGGAGGTGCACTGAGAGGCAGAGGCAGCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR CCA 72 bp | TGTAAAGGTGAGCACACACCCACACACAGCCTTTTGTaGGTCACAATCCGAGACTTCCTCTCATTGCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: CKGEHTPTHSLL*VTIRDFLSLLQ Trigger: TTGGAGCAATGAGAGGAAGTCTCGGATTGTGACCCACAAAAGGCTGTGTGTGGGTGTGTGCTCACCTTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR CCA 72 bp | AGGTACAGCAAGAAAACTGAAGTGTTTCACAGCTACTaGCAAGCCTATGCAGTGGTGCATACCCACATGCCC | + |
|
Preference number: 3 (lower is better) Translates to: RYSKKTEVFHSY*QAYAVVHTHMP Trigger: GGGCATGTGGGTATGCACCACTGCATAGGCTTGCCAGTAGCTGTGAAACACTTCAGTTTTCTTGCTGTACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR GCA 72 bp | TTCCTCCACAAGTGGGAGGAACAGGTCCTCAGGAGCTaGTGCTGGAGGGTTTCATTTGTACTTTCTACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: FLHKWEEQVLRS*CWRVSFVLSTK Trigger: TTTTGTAGAAAGTACAAATGAAACCCTCCAGCAGCAGCTCCTGAGGACCTGTTCCTCCCACTTGTGGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| 3UTR GCA 72 bp | GCCTTTTGTGGGTCACAATCCGAGACTTCCTCTCATTaGTCCAAATGGGATACACAAGTGGCAGAACTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: AFCGSQSETSSH*SKWDTQVAELY Trigger: GTACAGTTCTGCCACTTGTGTATCCCATTTGGAGCAATGAGAGGAAGTCTCGGATTGTGACCCACAAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR CCA 72 bp | AAAGACCAGACTGAGGCTGTAAAACTTACTCAGGTATaGTTGCTTGGTCACCCCCATGGTCATTCAGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: KDQTEAVKLTQV*LLGHPHGHSAE Trigger: CTCAGCTGAATGACCATGGGGGTGACCAAGCAACCATACCTGAGTAAGTTTTACAGCCTCAGTCTGGTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR TCA 72 bp | CCACAGACGATTCTGCAGAGGAAGAAAAGACCAGACTaGGGCTGTAAAACTTACTCAGGTATGGTTGCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: PQTILQRKKRPD*GCKTYSGMVAW Trigger: CCAAGCAACCATACCTGAGTAAGTTTTACAGCCTCAGTCTGGTCTTTTCTTCCTCTGCAGAATCGTCTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR GCA 72 bp | TTTGGTTCAGACCCCTTTACCACCACCTGGTACAGATaGCAAGGAAAAGCTGTACTTGTGTGTAAAGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: FGSDPFTTTWYR*QGKAVLVCKGE Trigger: CTCACCTTTACACACAAGTACAGCTTTTCCTTGGCATCTGTACCAGGTGGTGGTAAAGGGGTCTGAACCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR CCA 72 bp | GGGTCACAATCCGAGACTTCCTCTCATTGCTCCAAATaGGATACACAAGTGGCAGAACTGTACCAAACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GSQSETSSHCSK*DTQVAELYQTK Trigger: TTTGGTTTGGTACAGTTCTGCCACTTGTGTATCCCATTTGGAGCAATGAGAGGAAGTCTCGGATTGTGACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR-3UTR CAA 90 bp | TTAACTACTCAGGTGCAGTACAGGAGGGGCACTGCATCTCTTGTGGATGCATGTGTCAGCCTCATTCCTTaGGTCATTATCATTACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LTTQVQYRRGTASLVDACVSLIP*VIIITK Trigger: CTTTGTAATGATAATGACCAAAGGAATGAGGCTGAC...ACATGCATCCACAAGAGATGCAGTGCCCCTCCTGTACTGCACCTGAGTAGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR TCA 72 bp | TTAAGAGGGAGAAATCAGAATTTCTCCAAGCAGCTGTaGACAAGATACGTTCACAGTCCACATGCCCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: LRGRNQNFSKQL*TRYVHSPHAHV Trigger: CACATGGGCATGTGGACTGTGAACGTATCTTGTTCACAGCTGCTTGGAGAAATTCTGATTTCTCCCTCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR CCA 72 bp | GCAGAATATTTTGGAAGCAATTTAAGCAATAGCAAATaGTCACAGGTGTCTTCAAGCTCACAGGTCTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: AEYFGSNLSNSK*SQVSSSSQVFG Trigger: CCCAAAGACCTGTGAGCTTGAAGACACCTGTGACCATTTGCTATTGCTTAAATTGCTTCCAAAATATTCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGGGACTACAATCTGGGAGGGAGGCTCTGGGAGTGGGGAAGTCCCTCTGGAACTTCTGTGTGGCTaGGTCCCGCCTCCTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QAGTTIWEGGSGSGEVPLELLCG*VPPPAV Trigger: CACTGCAGGAGGCGGGACTCAGCCACACAGAAGTTC...CAGAGGGACTTCCCCACTCCCAGAGCCTCCCTCCCAGATTGTAGTCCCTGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR CAA 72 bp | GGGAAGGGGCCGCTAGTCCTCTGGAAGGCACCAAGCTaGGTGAGTGAGGGGAGCTGGGAAGAGCAGCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GKGPLVLWKAPS*VSEGSWEEQQY Trigger: GTACTGCTGCTCTTCCCAGCTCCCCTCACTCACCAAGCTTGGTGCCTTCCAGAGGACTAGCGGCCCCTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| CDS-3UTR TCA 90 bp | TGTGGGAAGGCGAGTCTGCTGTCTGCCGAGCAGGCAATGCTCACTGCTGACCTTGAACTTCTGTGTGGCTaGGTCCCGCCTCCTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CGKASLLSAEQAMLTADLELLCG*VPPPAV Trigger: CACTGCAGGAGGCGGGACTCAGCCACACAGAAGTTC...AAGGTCAGCAGTGAGCATTGCCTGCTCGGCAGACAGCAGACTCGCCTTCCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| CDS-3UTR CCA 90 bp | TTCCGGGCTCTCCTCCCTTCCTCCACAAGTGGGAGGAACAGGTCCTCAGGAGCTTTCTCCCGTAAGGCCTaGGACACCCTGTACCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FRALLPSSTSGRNRSSGAFSRKA*DTLYPS Trigger: TGAGGGGTACAGGGTGTCCCAGGCCTTACGGGAGAA...AGCTCCTGAGGACCTGTTCCTCCCACTTGTGGAGGAAGGGAGGAGAGCCCGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| CDS-3UTR CCA 90 bp | AAAACACTTGGTACACCTTCCTGCTCATTCAGTCTGTCCTGGACAGCAGCCTCCCATCCCGCGGCGGCCTaGGCTGCACCGAGAACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: KTLGTPSCSFSLSWTAASHPAAA*AAPRTR Trigger: GCGAGTTCTCGGTGCAGCCCAGGCCGCCGCGGGATG...GGAGGCTGCTGTCCAGGACAGACTGAATGAGCAGGAAGGTGTACCAAGTGTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135015.2 |
||
| CDS-3UTR GCA 90 bp | GGGCCGCCGTCTCTTCACTGTGGGAAGGCGAGTCTGCTGTCTGCCGAGCAGGCAATGTTCCAGTTATGCTaGTCCAAAGCAAGGCGACAC | + |
|
Preference number: 4 (lower is better) Translates to: GPPSLHCGKASLLSAEQAMFQLC*SKARRH Trigger: GTGTCGCCTTGCTTTGGAGCAGCATAACTGGAACAT...TGCCTGCTCGGCAGACAGCAGACTCGCCTTCCCACAGTGAAGAGACGGCGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| CDS-3UTR GCA 90 bp | GAAAACACTTGGTACACCTTCCTGCTCATTCAGTCTGTCCTGGACAGCAGCCTCCGCGGCGGCCTGGGCTaGACCGAGAACTCGCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ENTWYTFLLIQSVLDSSLRGGLG*TENSLL Trigger: TAGCAGCGAGTTCTCGGTGCAGCCCAGGCCGCCGCG...GAGGCTGCTGTCCAGGACAGACTGAATGAGCAGGAAGGTGTACCAAGTGTTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135015.2 |
||
| CDS-3UTR CCA 90 bp | CTCTCCTCCCTTCCTCCACAAGTGGGAGGAACAGGTCCTCAGGAGCTGCTGCTGAAGAGAACTTCTGTGTaGCTGAGTCCCGCCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSLPPQVGGTGPQELLLKRTSV*LSPASC Trigger: GCAGGAGGCGGGACTCAGCCACACAGAAGTTCTCTT...CAGCAGCAGCTCCTGAGGACCTGTTCCTCCCACTTGTGGAGGAAGGGAGGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| CDS-3UTR TCA 90 bp | CACTGTGGGAAGGCGAGTCTGCTGTCTGCCGAGCAGGCAATGCTCACTGCTGACTTCTCGGTCTGCTCCTaGGTTAGATCCTGCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HCGKASLLSAEQAMLTADFSVCS*VRSCSS Trigger: TGAGGAGCAGGATCTAACTCAGGAGCAGACCGAGAA...GTCAGCAGTGAGCATTGCCTGCTCGGCAGACAGCAGACTCGCCTTCCCACAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| CDS-3UTR TCA 90 bp | TGTTCCGGGCTCTCCTCCCTTCCTCCACAAGTGGGAGGAACAGGTCCTCAGGAGATGCCAGTCAGATCCTaGAACTGCAGCAGCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: CSGLSSLPPQVGGTGPQEMPVRS*NCSSFS Trigger: CGAGAAGCTGCTGCAGTTTCAGGATCTGACTGGCAT...CTCCTGAGGACCTGTTCCTCCCACTTGTGGAGGAAGGGAGGAGAGCCCGGAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| CDS-3UTR CCA 90 bp | CACTGTGGGAAGGCGAGTCTGCTGTCTGCCGAGCAGGCAATGCTCACTGCTGACGGCGACACTGCTCCATaGACTCTATGCCAGTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HCGKASLLSAEQAMLTADGDTAP*TLCQSD Trigger: ATCTGACTGGCATAGAGTCCATGGAGCAGTGTCGCC...GTCAGCAGTGAGCATTGCCTGCTCGGCAGACAGCAGACTCGCCTTCCCACAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| CDS-3UTR CCA 90 bp | AATGACTGCGAACAGTGGGAATGTCTCCTTCCCCACGAGGGCCGCCGTCTCTTCGGGCCGAGCTGGCGGTaGATTGAAAACACTTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: NDCEQWECLLPHEGRRLFGPSWR*IENTWY Trigger: GTACCAAGTGTTTTCAATCCACCGCCAGCTCGGCCC...GAAGAGACGGCGGCCCTCGTGGGGAAGGAGACATTCCCACTGTTCGCAGTCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| CDS-3UTR CCA 90 bp | AGTCTGTTCCGGGCTCTCCTCCCTTCCTCCACAAGTGGGAGGAACAGGTCCTCAGGGCCGAGCTGGCGGTaGATTGAAAACACTTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SLFRALLPSSTSGRNRSSGPSWR*IENTWY Trigger: GTACCAAGTGTTTTCAATCCACCGCCAGCTCGGCCC...TGAGGACCTGTTCCTCCCACTTGTGGAGGAAGGGAGGAGAGCCCGGAACAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| 3UTR CAA 72 bp | AGGAACCAGGAGCAGGAGGGGAGTTCAAGGCCAGTCTaGGGTGTGGAGAGTTTGAGGCCACTTTGGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: RNQEQEGSSRPV*GVESLRPLWAI Trigger: GATGGCCCAAAGTGGCCTCAAACTCTCCACACCCAAGACTGGCCTTGAACTCCCCTCCTGCTCCTGGTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| CDS-3UTR TCA 90 bp | AGTCTGTTCCGGGCTCTCCTCCCTTCCTCCACAAGTGGGAGGAACAGGTCCTCATTCCTCTCTTTCTCCTaGTCTGCCCTGAGAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLFRALLPSSTSGRNRSSFLSFS*SALREA Trigger: GGCTTCTCTCAGGGCAGATCAGGAGAAAGAGAGGAA...TGAGGACCTGTTCCTCCCACTTGTGGAGGAAGGGAGGAGAGCCCGGAACAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| CDS-3UTR GCA 90 bp | CAGTCTGTTCCGGGCTCTCCTCCCTTCCTCCACAAGTGGGAGGAACAGGTCCTCCTCTCCTTTTCCTCCTaGAAGTTCTGTCGTCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QSVPGSPPFLHKWEEQVLLSFSS*KFCRLR Trigger: GCGAAGACGACAGAACTTGCAGGAGGAAAAGGAGAG...GAGGACCTGTTCCTCCCACTTGTGGAGGAAGGGAGGAGAGCCCGGAACAGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| CDS-3UTR CCA 90 bp | TGTGGGAAGGCGAGTCTGCTGTCTGCCGAGCAGGCAATGCTCACTGCTGACCTTGGCGACACTGCTCCATaGACTCTATGCCAGTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CGKASLLSAEQAMLTADLGDTAP*TLCQSD Trigger: ATCTGACTGGCATAGAGTCCATGGAGCAGTGTCGCC...AAGGTCAGCAGTGAGCATTGCCTGCTCGGCAGACAGCAGACTCGCCTTCCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| CDS-3UTR TCA 90 bp | TCCCCACGAGGGCCGCCGTCTCTTCACTGTGGGAAGGCGAGTCTGCTGTCTGCCATAAGAAGTCATGGATaGCTGTTAGAGACTGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPRGPPSLHCGKASLLSAIRSHG*LLETVR Trigger: TCTCACAGTCTCTAACAGTCATCCATGACTTCTTAT...GGCAGACAGCAGACTCGCCTTCCCACAGTGAAGAGACGGCGGCCCTCGTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| CDS-3UTR CCA 90 bp | TGTGGGCAGTCTGTTCCGGGCTCTCCTCCCTTCCTCCACAAGTGGGAGGAACAGTGTTGTCTCAGCACCTaGGTTTGGTTCCTTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CGQSVPGSPPFLHKWEEQCCLST*VWFLSS Trigger: GGAAGAAAGGAACCAAACCCAGGTGCTGAGACAACA...CTGTTCCTCCCACTTGTGGAGGAAGGGAGGAGAGCCCGGAACAGACTGCCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGGGACTACAATCTGGGAGGGAGGCTCTGGGAGTGGGGAAGTCCCTCTGAGAGACTGTGAGAAGTaGAATCGTCTCTCTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QAGTTIWEGGSGSGEVPLRDCEK*NRLSTL Trigger: CAGAGTAGAGAGACGATTCCACTTCTCACAGTCTCT...CAGAGGGACTTCCCCACTCCCAGAGCCTCCCTCCCAGATTGTAGTCCCTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| CDS-3UTR CCA 90 bp | TGTTCCGGGCTCTCCTCCCTTCCTCCACAAGTGGGAGGAACAGGTCCTCAGGAGTCGTCTGTCAGGTCCTaGACAAAGAGAACTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CSGLSSLPPQVGGTGPQESSVRS*TKRTSV Trigger: CACAGAAGTTCTCTTTGTCCAGGACCTGACAGACGA...CTCCTGAGGACCTGTTCCTCCCACTTGTGGAGGAAGGGAGGAGAGCCCGGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| 3UTR CAA 72 bp | TCCCGTAAGGCCTGGGACACCCTGTACCCCTCAGGCTaGTTTGTAGAACAAGCCCAGAAAAGCATCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRKAWDTLYPSG*FVEQAQKSILL Trigger: CAGCAGGATGCTTTTCTGGGCTTGTTCTACAAACAAGCCTGAGGGGTACAGGGTGTCCCAGGCCTTACGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153894.2 |
||
| CDS-3UTR TCA 90 bp | CACTTGGTACACCTTCCTGCTCATTCAGTCTGTCCTGGACAGCAGCCTCCATGTGAACTCGCTGCTACCTaGAACTGCAGCAGCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HLVHLPAHSVCPGQQPPCELAAT*NCSSFS Trigger: CGAGAAGCTGCTGCAGTTTCAGGTAGCAGCGAGTTC...ACATGGAGGCTGCTGTCCAGGACAGACTGAATGAGCAGGAAGGTGTACCAAGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135015.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCAGGCCTAGCAGCGCTAACATTTCCCAAGGTAGAATTCAGGGCCCTGCGCATGTTCCAGTTATGCTaGTCCAAAGCAAGGCGACAC | + |
|
Preference number: 4 (lower is better) Translates to: PAGLAALTFPKVEFRALRMFQLC*SKARRH Trigger: GTGTCGCCTTGCTTTGGAGCAGCATAACTGGAACAT...GCGCAGGGCCCTGAATTCTACCTTGGGAAATGTTAGCGCTGCTAGGCCTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| CDS-3UTR CCA 90 bp | CAGTCTGTTCCGGGCTCTCCTCCCTTCCTCCACAAGTGGGAGGAACAGGTCCTCAGAGACTGTGAGAAGTaGAATCGTCTCTCTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSVPGSPPFLHKWEEQVLRDCEK*NRLSTL Trigger: CAGAGTAGAGAGACGATTCCACTTCTCACAGTCTCT...GAGGACCTGTTCCTCCCACTTGTGGAGGAAGGGAGGAGAGCCCGGAACAGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| CDS-3UTR CCA 90 bp | TTCCGGGCTCTCCTCCCTTCCTCCACAAGTGGGAGGAACAGGTCCTCAGGAGCTGGGAAGTACCCGTCTTaGAAAATTGGCTTCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: FRALLPSSTSGRNRSSGAGKYPS*KIGFNL Trigger: CAGATTGAAGCCAATTTTCCAAGACGGGTACTTCCC...AGCTCCTGAGGACCTGTTCCTCCCACTTGTGGAGGAAGGGAGGAGAGCCCGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| CDS-3UTR CCA 90 bp | AACAAGATACGTTCACAGTCCACATGCCCATGTGCCAGGCAGACAGACAGGCAGAAGAGAACTTCTGTGTaGCTGAGTCCCGCCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NKIRSQSTCPCARQTDRQKRTSV*LSPASC Trigger: GCAGGAGGCGGGACTCAGCCACACAGAAGTTCTCTT...CTGCCTGTCTGTCTGCCTGGCACATGGGCATGTGGACTGTGAACGTATCTTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR CAA 72 bp | GAGGGGAGTTCAAGGCCAGTCTTGGGTGTGGAGAGTTaGAGGCCACTTTGGGCCATCAGAACCTCTCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EGSSRPVLGVES*RPLWAIRTSLK Trigger: TTTGAGAGAGGTTCTGATGGCCCAAAGTGGCCTCAAACTCTCCACACCCAAGACTGGCCTTGAACTCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| CDS-3UTR GCA 90 bp | GAAAACACTTGGTACACCTTCCTGCTCATTCAGTCTGTCCTGGACAGCAGCCTCGCACCGAGAACTCGCTaGTACCTGAAACTGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ENTWYTFLLIQSVLDSSLAPRTR*YLKLQQ Trigger: CTGCTGCAGTTTCAGGTAGCAGCGAGTTCTCGGTGC...GAGGCTGCTGTCCAGGACAGACTGAATGAGCAGGAAGGTGTACCAAGTGTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135015.2 |
||
| 3UTR CAA 72 bp | ACAGGAGGGGCACTGCATCTCTTGTGGATGCATGTTTaGTTGCTGCGTTCTCCCCGAGACAAACAGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGGALHLLWMHV*LLRSPRDKQRS Trigger: GCTTCTCTGTTTGTCTCGGGGAGAACGCAGCAACAAAACATGCATCCACAAGAGATGCAGTGCCCCTCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| CDS-3UTR TCA 90 bp | AAACACTTGGTACACCTTCCTGCTCATTCAGTCTGTCCTGGACAGCAGCCTCCATTCTCGGTCTGCTCCTaGGTTAGATCCTGCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KHLVHLPAHSVCPGQQPPFSVCS*VRSCSS Trigger: TGAGGAGCAGGATCTAACTCAGGAGCAGACCGAGAA...TGGAGGCTGCTGTCCAGGACAGACTGAATGAGCAGGAAGGTGTACCAAGTGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135015.2 |
||
| CDS-3UTR TCA 90 bp | TTCCGGGCTCTCCTCCCTTCCTCCACAAGTGGGAGGAACAGGTCCTCAGGAGCTAAAAGAGTGCATAAATaGAACAATGTCCCCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FRALLPSSTSGRNRSSGAKRVHK*NNVPNR Trigger: CCTGTTGGGGACATTGTTTCATTTATGCACTCTTTT...AGCTCCTGAGGACCTGTTCCTCCCACTTGTGGAGGAAGGGAGGAGAGCCCGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| CDS-3UTR TCA 90 bp | TGGATGCATGTTTTGTTGCTGCGTTCTCCCCGAGACAAACAGAGAAGCCAACCATTCCTCTCTTTCTCCTaGTCTGCCCTGAGAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WMHVLLLRSPRDKQRSQPFLSFS*SALREA Trigger: GGCTTCTCTCAGGGCAGATCAGGAGAAAGAGAGGAA...TGGTTGGCTTCTCTGTTTGTCTCGGGGAGAACGCAGCAACAAAACATGCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| CDS-3UTR CCA 90 bp | ACTGTGGGAAGGCGAGTCTGCTGTCTGCCGAGCAGGCAATGCTCACTGCTGACCCCCGTCTTGGAAAATTaGCTTCAATCTGAAACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVGRRVCCLPSRQCSLLTPVLEN*LQSETF Trigger: AAAAGTTTCAGATTGAAGCCAATTTTCCAAGACGGG...GGTCAGCAGTGAGCATTGCCTGCTCGGCAGACAGCAGACTCGCCTTCCCACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| CDS-3UTR CCA 90 bp | TTGGTGAGTGAGGGGAGCTGGGAAGAGCAGCAGTACAGCCAGAGGGGAACCAGGCCCGTCTTGGAAAATTaGCTTCAATCTGAAACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVSEGSWEEQQYSQRGTRPVLEN*LQSETF Trigger: AAAAGTTTCAGATTGAAGCCAATTTTCCAAGACGGG...CCTGGTTCCCCTCTGGCTGTACTGCTGCTCTTCCCAGCTCCCCTCACTCACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR CAA 72 bp | GTGTGTAAAGGTGAGCACACACCCACACACAGCCTTTaGTGGGTCACAATCCGAGACTTCCTCTCATTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VCKGEHTPTHSL*WVTIRDFLSLL Trigger: GAGCAATGAGAGGAAGTCTCGGATTGTGACCCACAAAAGGCTGTGTGTGGGTGTGTGCTCACCTTTACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| CDS-3UTR TCA 90 bp | CACACACAGCCTTTTGTGGGTCACAATCCGAGACTTCCTCTCATTGCTCCAAATTTCTCGGTCTGCTCCTaGGTTAGATCCTGCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HTQPFVGHNPRLPLIAPNFSVCS*VRSCSS Trigger: TGAGGAGCAGGATCTAACTCAGGAGCAGACCGAGAA...ATTTGGAGCAATGAGAGGAAGTCTCGGATTGTGACCCACAAAAGGCTGTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| CDS-3UTR TCA 90 bp | ACTGCATCTCTTGTGGATGCATGTTTTGTTGCTGCGTTCTCCCCGAGACAAACAATGCCAGTCAGATCCTaGAACTGCAGCAGCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TASLVDACFVAAFSPRQTMPVRS*NCSSFS Trigger: CGAGAAGCTGCTGCAGTTTCAGGATCTGACTGGCAT...TGTTTGTCTCGGGGAGAACGCAGCAACAAAACATGCATCCACAAGAGATGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| CDS-3UTR GCA 90 bp | TCCTTCTCAGTCACCTCCCGACATTCTTTCCTTGGCCTTGGCACCATTAGCAATCTCTCCTTTTCCTCCTaGAAGTTCTGTCGTCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SFSVTSRHSFLGLGTISNLSFSS*KFCRLR Trigger: GCGAAGACGACAGAACTTGCAGGAGGAAAAGGAGAG...ATTGCTAATGGTGCCAAGGCCAAGGAAAGAATGTCGGGAGGTGACTGAGAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| CDS-3UTR CCA 90 bp | CTGTCAGCAAGACAGACTTCATCTGAGGGTCCTCTCAACCTCACTGTAGTGCCATGTTGTCTCAGCACCTaGGTTTGGTTCCTTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSARQTSSEGPLNLTVVPCCLST*VWFLSS Trigger: GGAAGAAAGGAACCAAACCCAGGTGCTGAGACAACA...TGGCACTACAGTGAGGTTGAGAGGACCCTCAGATGAAGTCTGTCTTGCTGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| CDS-3UTR CCA 90 bp | CAGGGACAAAATGTGAAGTCCACAGTTCACCCAGGGAGAGAAATGGCACCCAGAGGGAAGTACCCGTCTTaGAAAATTGGCTTCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGQNVKSTVHPGREMAPRGKYPS*KIGFNL Trigger: CAGATTGAAGCCAATTTTCCAAGACGGGTACTTCCC...TCTGGGTGCCATTTCTCTCCCTGGGTGAACTGTGGACTTCACATTTTGTCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| CDS-3UTR CCA 90 bp | TGGATGCATGTTTTGTTGCTGCGTTCTCCCCGAGACAAACAGAGAAGCCAACCATCGTCTGTCAGGTCCTaGACAAAGAGAACTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: WMHVLLLRSPRDKQRSQPSSVRS*TKRTSV Trigger: CACAGAAGTTCTCTTTGTCCAGGACCTGACAGACGA...TGGTTGGCTTCTCTGTTTGTCTCGGGGAGAACGCAGCAACAAAACATGCATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| CDS-3UTR TCA 90 bp | CAGGGACAAAATGTGAAGTCCACAGTTCACCCAGGGAGAGAAATGGCACCCAGAATAAGAAGTCATGGATaGCTGTTAGAGACTGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGQNVKSTVHPGREMAPRIRSHG*LLETVR Trigger: TCTCACAGTCTCTAACAGTCATCCATGACTTCTTAT...TCTGGGTGCCATTTCTCTCCCTGGGTGAACTGTGGACTTCACATTTTGTCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR CAA 72 bp | AGCCTTTTGTGGGTCACAATCCGAGACTTCCTCTCATaGCTCCAAATGGGATACACAAGTGGCAGAACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLLWVTIRDFLS*LQMGYTSGRTV Trigger: TACAGTTCTGCCACTTGTGTATCCCATTTGGAGCAATGAGAGGAAGTCTCGGATTGTGACCCACAAAAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| CDS-3UTR GCA 90 bp | CAGGTAGGCTTCATCCTGCTGTTGTCTCAGCACCTGGGTTTGGTTCCTTTCTTCCTTGGCATCGTTAAGTaGCTAAATATATCAAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: QVGFILLLSQHLGLVPFFLGIVK*LNISSI Trigger: GATACTTGATATATTTAGGCACTTAACGATGCCAAG...GAAGAAAGGAACCAAACCCAGGTGCTGAGACAACAGCAGGATGAAGCCTACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153894.2 |
||
| 3UTR CAA 72 bp | ACTGCTCCTTCTCAGTCACCTCCCGACATTCTTTCCTaGGCCTTGGCACCATTAGCAATTTTCATAATAACT | + |
|
Preference number: 4 (lower is better) Translates to: TAPSQSPPDILS*ALAPLAIFIIT Trigger: AGTTATTATGAAAATTGCTAATGGTGCCAAGGCCAAGGAAAGAATGTCGGGAGGTGACTGAGAAGGAGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| CDS-3UTR TCA 90 bp | AGAAACAAAGTTATTCATAAACTGTGGGCAGTCTGTTCCGGGCTCTCCTCCCTTAAAAGAGTGCATAAATaGAACAATGTCCCCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RNKVIHKLWAVCSGLSSLKRVHK*NNVPNR Trigger: CCTGTTGGGGACATTGTTTCATTTATGCACTCTTTT...AAGGGAGGAGAGCCCGGAACAGACTGCCCACAGTTTATGAATAACTTTGTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| 3UTR CAA 72 bp | GCAGAACTGGAAATAAATCCTTCCATTGTCCATGACTaGACTTTGGAACAACTGGCAGAATATTTTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AELEINPSIVHD*TLEQLAEYFGS Trigger: GCTTCCAAAATATTCTGCCAGTTGTTCCAAAGTCAAGTCATGGACAATGGAAGGATTTATTTCCAGTTCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| 3UTR CAA 72 bp | CTGGAAATAAATCCTTCCATTGTCCATGACTTGACTTaGGAACAACTGGCAGAATATTTTGGAAGCAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: LEINPSIVHDLT*EQLAEYFGSNL Trigger: TAAATTGCTTCCAAAATATTCTGCCAGTTGTTCCAAAGTCAAGTCATGGACAATGGAAGGATTTATTTCCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
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| CDS GCA 90 bp | TGCGCTCCTCTAGGGTCCCACTCCCCATCCCGCGGCGGCCTGGGCTaGACCGAGAACTCGCTGCTACCTGAAACTGCAGCAGCTTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: CAPLGSHSPSRGGLG*TENSLLPETAAASR Trigger: CCGAGAAGCTGCTGCAGTTTCAGGTAGCAGCGAGTTCTCGGTGCAGCCCAGGCCGCCGCGGGATGGGGAGTGGGACCCTAGAGGAGCGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135015.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCACGAGGGCCGCCGTCTCTTCACTGTGGGAAGGCGAGTCTGCTGTCTGCCCTGTACCCCTCAGGCTaGTTTGTAGAACAAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPRGPPSLHCGKASLLSALYPSG*FVEQAQ Trigger: CTGGGCTTGTTCTACAAACAAGCCTGAGGGGTACAG...GGCAGACAGCAGACTCGCCTTCCCACAGTGAAGAGACGGCGGCCCTCGTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| CDS-3UTR CAA 90 bp | CCCACGAGGGCCGCCGTCTCTTCACTGTGGGAAGGCGAGTCTGCTGTCTGCCGAATCCAAGCAGGCCCCTaGGTTGTGGTCTTGAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: PTRAAVSSLWEGESAVCRIQAGP*VVVLRQ Trigger: TTGTCTCAAGACCACAACCAAGGGGCCTGCTTGGAT...TCGGCAGACAGCAGACTCGCCTTCCCACAGTGAAGAGACGGCGGCCCTCGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| CDS-3UTR CAA 90 bp | AGGCCAAGCATCCACAGGTGGAGCGGTGGGCCCGGGAAGGGGCCGCTAGTCCTCAGGGAAGTACCCGTCTaGGAAAATTGGCTTCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: RPSIHRWSGGPGKGPLVLREVPV*ENWLQS Trigger: AGATTGAAGCCAATTTTCCAAGACGGGTACTTCCCT...GAGGACTAGCGGCCCCTTCCCGGGCCCACCGCTCCACCTGTGGATGCTTGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| CDS-3UTR CAA 90 bp | ACTGTGGGAAGGCGAGTCTGCTGTCTGCCGAGCAGGCAATGCTCACTGCTGACCGGCTTCATCCTGCTGTaGTCTCAGCACCTGGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TVGRRVCCLPSRQCSLLTGFILL*SQHLGL Trigger: CAAACCCAGGTGCTGAGACAACAGCAGGATGAAGCC...GGTCAGCAGTGAGCATTGCCTGCTCGGCAGACAGCAGACTCGCCTTCCCACAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| CDS-3UTR CAA 90 bp | TGGGCAGTCTGTTCCGGGCTCTCCTCCCTTCCTCCACAAGTGGGAGGAACAGGTAGGGAAGTACCCGTCTaGGAAAATTGGCTTCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: WAVCSGLSSLPPQVGGTGREVPV*ENWLQS Trigger: AGATTGAAGCCAATTTTCCAAGACGGGTACTTCCCT...ACCTGTTCCTCCCACTTGTGGAGGAAGGGAGGAGAGCCCGGAACAGACTGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| CDS-3UTR CAA 90 bp | AACAAGATACGTTCACAGTCCACATGCCCATGTGCCAGGCAGACAGACAGGCAGCTGTACCCCTCAGGCTaGTTTGTAGAACAAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NKIRSQSTCPCARQTDRQLYPSG*FVEQAQ Trigger: CTGGGCTTGTTCTACAAACAAGCCTGAGGGGTACAG...CTGCCTGTCTGTCTGCCTGGCACATGGGCATGTGGACTGTGAACGTATCTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| CDS-3UTR CAA 90 bp | GAAAACACTTGGTACACCTTCCTGCTCATTCAGTCTGTCCTGGACAGCAGCCTCATCCTGAGGATGGTTTaGCGCTCCTCTAGGGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ENTWYTFLLIQSVLDSSLILRMV*RSSRVP Trigger: TGGGACCCTAGAGGAGCGCAAAACCATCCTCAGGAT...GAGGCTGCTGTCCAGGACAGACTGAATGAGCAGGAAGGTGTACCAAGTGTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135015.2 |
||
| CDS-3UTR CAA 90 bp | TTAACTACTCAGGTGCAGTACAGGAGGGGCACTGCATCTCTTGTGGATGCATGTGGCTTCATCCTGCTGTaGTCTCAGCACCTGGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LTTQVQYRRGTASLVDACGFILL*SQHLGL Trigger: CAAACCCAGGTGCTGAGACAACAGCAGGATGAAGCC...ACATGCATCCACAAGAGATGCAGTGCCCCTCCTGTACTGCACCTGAGTAGTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126071.9 |
||
| CDS-3UTR CAA 90 bp | AGAAACAAAGTTATTCATAAACTGTGGGCAGTCTGTTCCGGGCTCTCCTCCCTTTCTACTCTGGAATCATaGGGTAACTTGAAAATGATC | + |
|
Preference number: 5 (lower is better) Translates to: RNKVIHKLWAVCSGLSSLSTLES*GNLKMI Trigger: GATCATTTTCAAGTTACCCAATGATTCCAGAGTAGA...AAGGGAGGAGAGCCCGGAACAGACTGCCCACAGTTTATGAATAACTTTGTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
||
| CDS GCA 72 bp | CTAGGGTCCCACTCCCCATCCCGCGGCGGCCTGGGCTaGACCGAGAACTCGCTGCTACCTGAAACTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LGSHSPSRGGLG*TENSLLPETAA Trigger: TGCTGCAGTTTCAGGTAGCAGCGAGTTCTCGGTGCAGCCCAGGCCGCCGCGGGATGGGGAGTGGGACCCTAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135015.2 |
||
| CDS CAA 72 bp | CCAAGCAGGCCCTGTAGGGGCCGAGCTGGCGGTGGATaGAAAACACTTGGTACACCTTCCTGCTCATTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PSRPCRGRAGGG*KTLGTPSCSFS Trigger: ACTGAATGAGCAGGAAGGTGTACCAAGTGTTTTCAATCCACCGCCAGCTCGGCCCCTACAGGGCCTGCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000137413.8 |
||
| CDS TCA 72 bp | AAGCCCAGAAAAGCATCCTGCTGTTTATCAGTGAGATaGCCTCAGGTGCGCAGAGAGCATTGCGGCAGAACT | + |
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Preference number: 6 (lower is better) Translates to: KPRKASCCLSVR*PQVRREHCGRT Trigger: AGTTCTGCCGCAATGCTCTCTGCGCACCTGAGGTCATCTCACTGATAAACAGCAGGATGCTTTTCTGGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026991.16 ENSMUST00000124752.2 ENSMUST00000126071.9 |
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| CDS TCA 72 bp | AGAACAAGCCCAGAAAAGCATCCTGCTGTTTATCAGTaGGATGACCTCAGGTGCGCAGAGAGCATTGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: RTSPEKHPAVYQ*DDLRCAESIAA Trigger: TGCCGCAATGCTCTCTGCGCACCTGAGGTCATCTCACTGATAAACAGCAGGATGCTTTTCTGGGCTTGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026991.16 ENSMUST00000124752.2 ENSMUST00000126071.9 |
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| CDS CAA 72 bp | TTTATCAGTGAGATGACCTCAGGTGCGCAGAGAGCATaGCGGCAGAACTCATCAGAGTCCTGGTGGTCATCT | + |
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Preference number: 6 (lower is better) Translates to: FISEMTSGAQRA*RQNSSESWWSS Trigger: AGATGACCACCAGGACTCTGATGAGTTCTGCCGCAATGCTCTCTGCGCACCTGAGGTCATCTCACTGATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026991.16 ENSMUST00000124752.2 ENSMUST00000126071.9 |
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| CDS CAA 72 bp | TCTACTCTGGAATCATTGGGTAACTTGAAAATGATCTaGACACTTTCAGGATCATCAGGGGAGGGCTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: STLESLGNLKMI*TLSGSSGEGSG Trigger: CCCTGAGCCCTCCCCTGATGATCCTGAAAGTGTCAAGATCATTTTCAAGTTACCCAATGATTCCAGAGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
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| CDS CAA 90 bp | TGTGAGAAGTGGAATCGTCTCTCTACTCTGGAATCATTGGGTAACTaGAAAATGATCTTGACACTTTCAGGATCATCAGGGGAGGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: CEKWNRLSTLESLGN*KMILTLSGSSGEGS Trigger: TGAGCCCTCCCCTGATGATCCTGAAAGTGTCAAGATCATTTTCAAGTTACCCAATGATTCCAGAGTAGAGAGACGATTCCACTTCTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
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| CDS CAA 72 bp | TGGAATCGTCTCTCTACTCTGGAATCATTGGGTAACTaGAAAATGATCTTGACACTTTCAGGATCATCAGGG | + |
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Preference number: 6 (lower is better) Translates to: WNRLSTLESLGN*KMILTLSGSSG Trigger: CCCTGATGATCCTGAAAGTGTCAAGATCATTTTCAAGTTACCCAATGATTCCAGAGTAGAGAGACGATTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026991.16 ENSMUST00000126071.9 |
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