Pregenerated sensors for FAF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010517Ensembl transcript IDs: ENSMUST00000102724.5
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACAACAGAACACTAGTCAGGCATCAGGAGAGGGCAATGGGGTTGTaGCACTCCGTCATGAGGAGCGGGGAACATATACTCATGGATGGG | + |
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Preference number: 1 (lower is better) Translates to: HNRTLVRHQERAMGL*HSVMRSGEHILMDG Trigger: CCCATCCATGAGTATATGTTCCCCGCTCCTCATGACGGAGTGCCACAACCCCATTGCCCTCTCCTGATGCCTGACTAGTGTTCTGTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR TCA 90 bp | CGGAGAGCTCTCTCAAGCCTCTGCCCACACCCTGGCTGCTGTTTTTaGCTGTGGTTTAAGTTCAGGACTGTGGCTTCTCACAGCAGCTAT | + |
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Preference number: 1 (lower is better) Translates to: RRALSSLCPHPGCCF*LWFKFRTVASHSSY Trigger: ATAGCTGCTGTGAGAAGCCACAGTCCTGAACTTAAACCACAGTCAAAAACAGCAGCCAGGGTGTGGGCAGAGGCTTGAGAGAGCTCTCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR GCA 90 bp | GTGGTGCCACTCATTGGGAAGGAAGGAACAGCGCTGGAGAGGAATTaGTTAGGAGAAACTCCCCTCACAGTGAGCTCCCTTTTCAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: VVPLIGKEGTALERN*LGETPLTVSSLFSQ Trigger: CTGACTGAAAAGGGAGCTCACTGTGAGGGGAGTTTCTCCTAAGCAATTCCTCTCCAGCGCTGTTCCTTCCTTCCCAATGAGTGGCACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR CCA 90 bp | AGTACAGCTGCAGCTTCAGAAATGACATCTTGTGGTGCCACTCATTaGGAAGGAAGGAACAGCGCTGGAGAGGAATTGCTTAGGAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: STAAASEMTSCGATH*EGRNSAGEELLRRN Trigger: GTTTCTCCTAAGCAATTCCTCTCCAGCGCTGTTCCTTCCTTCCCAATGAGTGGCACCACAAGATGTCATTTCTGAAGCTGCAGCTGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR CCA 90 bp | TTCAGGACTGTGGCTTCTCACAGCAGCTATAGAACAAAGTCTGGCTaGAAAAAGAAGAGCTGGTGCCCTAGTACAGCTGCAGCTTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: FRTVASHSSYRTKSG*KKKSWCPSTAAASE Trigger: TTCTGAAGCTGCAGCTGTACTAGGGCACCAGCTCTTCTTTTTCCAGCCAGACTTTGTTCTATAGCTGCTGTGAGAAGCCACAGTCCTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR TCA 90 bp | GCAGCTTGCCACAGCTGGCCTACAATGGTACCAGCATTCTCTTCGTaGTCTCAACACACTGTGTACTTGAATAGTTTCCCAAGCTGCAAT | + |
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Preference number: 1 (lower is better) Translates to: AACHSWPTMVPAFSS*SQHTVYLNSFPSCN Trigger: ATTGCAGCTTGGGAAACTATTCAAGTACACAGTGTGTTGAGATCACGAAGAGAATGCTGGTACCATTGTAGGCCAGCTGTGGCAAGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR CCA 90 bp | TCTCACAGCAGCTATAGAACAAAGTCTGGCTGGAAAAAGAAGAGCTaGTGCCCTAGTACAGCTGCAGCTTCAGAAATGACATCTTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: SHSSYRTKSGWKKKS*CPSTAAASEMTSCG Trigger: ACCACAAGATGTCATTTCTGAAGCTGCAGCTGTACTAGGGCACCAGCTCTTCTTTTTCCAGCCAGACTTTGTTCTATAGCTGCTGTGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR CCA 90 bp | CACACCCTGGCTGCTGTTTTTGACTGTGGTTTAAGTTCAGGACTGTaGCTTCTCACAGCAGCTATAGAACAAAGTCTGGCTGGAAAAAGA | + |
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Preference number: 1 (lower is better) Translates to: HTLAAVFDCGLSSGL*LLTAAIEQSLAGKR Trigger: TCTTTTTCCAGCCAGACTTTGTTCTATAGCTGCTGTGAGAAGCCACAGTCCTGAACTTAAACCACAGTCAAAAACAGCAGCCAGGGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR CCA 90 bp | ATGAAACAAACAAACAAACAAACAAACAAACAAACCCCTCCAAGATaGAATATGCAGCGCATGACAGAAGTATATAAATACCTTGCATAC | + |
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Preference number: 1 (lower is better) Translates to: MKQTNKQTNKQTPPR*NMQRMTEVYKYLAY Trigger: GTATGCAAGGTATTTATATACTTCTGTCATGCGCTGCATATTCCATCTTGGAGGGGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR-3UTR TCA 90 bp | GACCAGACACACCTCCAGCTTTGGGTAAGTCTTCTTAGAGCCCCAAGATGGTCCGAGGAGCCCATCTCTTaGCACGTGCCGCTGGCTCGT | + |
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Preference number: 2 (lower is better) Translates to: DQTHLQLWVSLLRAPRWSEEPIS*HVPLAR Trigger: ACGAGCCAGCGGCACGTGTCAAGAGATGGGCTCCTC...GGACCATCTTGGGGCTCTAAGAAGACTTACCCAAAGCTGGAGGTGTGTCTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR-3UTR TCA 90 bp | GTTAGACATGAGAACTCGGAGAGCTCTCTCAAGCCTCTGCCCACACCCTGGCTGAGTGTGACATTGAACTaGGTGACACGAGCAGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: VRHENSESSLKPLPTPWLSVTLN*VTRAGR Trigger: CCTACCTGCTCGTGTCACTCAGTTCAATGTCACACT...CAGCCAGGGTGTGGGCAGAGGCTTGAGAGAGCTCTCCGAGTTCTCATGTCTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR-3UTR CCA 90 bp | GTAGCACAGAGGTTAAGTTCCCCTGGGGCCACTCACACACAACAGAACACTAGTCTGGCTCGTCAGGAGTaGCTGCTTCCACCTCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: VAQRLSSPGATHTQQNTSLARQE*LLPPLS Trigger: ACTGAGAGGTGGAAGCAGCCACTCCTGACGAGCCAG...ACTAGTGTTCTGTTGTGTGTGAGTGGCCCCAGGGGAACTTAACCTCTGTGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGATGTTCATGGCTGAGCATCAGAGGAAAACAGGTGAACTTTCTTGGGCAACACGAGCAGGTAGGTaGGTTGGTGAGGAGCCCATC | + |
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Preference number: 2 (lower is better) Translates to: QGMFMAEHQRKTGELSWATRAGR*VGEEPI Trigger: GATGGGCTCCTCACCAACCCACCTACCTGCTCGTGT...TGCCCAAGAAAGTTCACCTGTTTTCCTCTGATGCTCAGCCATGAACATCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR-3UTR CCA 90 bp | GAGGAAGAAAGGGCAGGAAAACTGTGTGTCGTGTCCACAGAGACACTAGCAGTGATCAGGAGAGGGCAATaGGGTTGTGGCACTCCGTCA | + |
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Preference number: 2 (lower is better) Translates to: EEERAGKLCVVSTETLAVIRRGQ*GCGTPS Trigger: TGACGGAGTGCCACAACCCCATTGCCCTCTCCTGAT...CACTGCTAGTGTCTCTGTGGACACGACACACAGTTTTCCTGCCCTTTCTTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR CAA 90 bp | ACACACAACAGAACACTAGTCAGGCATCAGGAGAGGGCAATGGGGTaGTGGCACTCCGTCATGAGGAGCGGGGAACATATACTCATGGAT | + |
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Preference number: 2 (lower is better) Translates to: THNRTLVRHQERAMG*WHSVMRSGEHILMD Trigger: ATCCATGAGTATATGTTCCCCGCTCCTCATGACGGAGTGCCACAACCCCATTGCCCTCTCCTGATGCCTGACTAGTGTTCTGTTGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR CAA 90 bp | TGTGGTGCCACTCATTGGGAAGGAAGGAACAGCGCTGGAGAGGAATaGCTTAGGAGAAACTCCCCTCACAGTGAGCTCCCTTTTCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: CGATHWEGRNSAGEE*LRRNSPHSELPFQS Trigger: TGACTGAAAAGGGAGCTCACTGTGAGGGGAGTTTCTCCTAAGCAATTCCTCTCCAGCGCTGTTCCTTCCTTCCCAATGAGTGGCACCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR-3UTR TCA 90 bp | GCCTCTGCCCACACCCTGGCTGCTGTTTTTGACTGTGGTTTAAGTTCAGGACTGCCAGCATTCTCTTCGTaGTCTCAACACACTGTGTAC | + |
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Preference number: 2 (lower is better) Translates to: ASAHTLAAVFDCGLSSGLPAFSS*SQHTVY Trigger: GTACACAGTGTGTTGAGATCACGAAGAGAATGCTGG...CAGTCCTGAACTTAAACCACAGTCAAAAACAGCAGCCAGGGTGTGGGCAGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR-3UTR GCA 90 bp | AACAGAACACTAGTCAGGCATCAGGAGAGGGCAATGGGGTTGTGGCACTCCGTCTTTTTCCAGCAATCTTaGAAGAGGCAGAAGTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: NRTLVRHQERAMGLWHSVFFQQS*KRQKCD Trigger: GTCACACTTCTGCCTCTTGCAAGATTGCTGGAAAAA...GACGGAGTGCCACAACCCCATTGCCCTCTCCTGATGCCTGACTAGTGTTCTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR CAA 90 bp | AAACAGACACCCCACCACATGACTAGGTCCAGATGTATAAAGCTGTaGAGGAAGAAAGGGCAGGAAAACTGTGTGTCGTGTCCACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: KQTPHHMTRSRCIKL*RKKGQENCVSCPQR Trigger: TCTCTGTGGACACGACACACAGTTTTCCTGCCCTTTCTTCCTCAACAGCTTTATACATCTGGACCTAGTCATGTGGTGGGGTGTCTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR CAA 90 bp | TATCAGATACACAGCATCCTGATGTCTAGGACAGAGAGAACTGTCTaGGACAATGAGGGAAAGATGGGTAGCACAGAGGTTAAGTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: YQIHSILMSRTERTV*DNEGKMGSTEVKFP Trigger: GGGGAACTTAACCTCTGTGCTACCCATCTTTCCCTCATTGTCCAAGACAGTTCTCTCTGTCCTAGACATCAGGATGCTGTGTATCTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR CAA 90 bp | TGCTTAGGAGAAACTCCCCTCACAGTGAGCTCCCTTTTCAGTCAGTaGGCAGATAAAGCGCAGTGGTATTGGGAACAATCTCTTAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: CLGETPLTVSSLFSQ*ADKAQWYWEQSLRE Trigger: TTCTCTAAGAGATTGTTCCCAATACCACTGCGCTTTATCTGCCAACTGACTGAAAAGGGAGCTCACTGTGAGGGGAGTTTCTCCTAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR-3UTR GCA 90 bp | CTTCTCACAGCAGCTATAGAACAAAGTCTGGCTGGAAAAAGAAGAGCTGGTGCCAATGACATCTTGTGGTaGCACTCATTGGGAAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LLTAAIEQSLAGKRRAGANDILW*HSLGRK Trigger: CTTCCTTCCCAATGAGTGGCACCACAAGATGTCATT...GGCACCAGCTCTTCTTTTTCCAGCCAGACTTTGTTCTATAGCTGCTGTGAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR-3UTR CCA 90 bp | CTTCTCACAGCAGCTATAGAACAAAGTCTGGCTGGAAAAAGAAGAGCTGGTGCCCTACATAATGAGCTCTaGTCTCCAAAGCCTAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: LLTAAIEQSLAGKRRAGALHNEL*SPKPKV Trigger: CACTTTAGGCTTTGGAGACCAGAGCTCATTATGTAG...GGCACCAGCTCTTCTTTTTCCAGCCAGACTTTGTTCTATAGCTGCTGTGAGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR-3UTR TCA 90 bp | TGCACTTCTACTAAATCAAACCCAAGATTACTATGTATCAATTCTGGCAACACAAGTGCCTCAAAAAGTTaGAGAGCAGCTTGCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: CTSTKSNPRLLCINSGNTSASKS*RAACHS Trigger: GCTGTGGCAAGCTGCTCTTCAACTTTTTGAGGCACT...TGTGTTGCCAGAATTGATACATAGTAATCTTGGGTTTGATTTAGTAGAAGTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR GCA 72 bp | GTAGGTGGGTTGGTGAGGAGCCCATCTCTTGACACGTaGCGCTGGCTCGTCAGGAGTGGCTGCTTCCACCTC | + |
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Preference number: 3 (lower is better) Translates to: VGGLVRSPSLDT*RWLVRSGCFHL Trigger: GAGGTGGAAGCAGCCACTCCTGACGAGCCAGCGGCACGTGTCAAGAGATGGGCTCCTCACCAACCCACCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR CCA 72 bp | GGGTTGGTGAGGAGCCCATCTCTTGACACGTGCCGCTaGCTCGTCAGGAGTGGCTGCTTCCACCTCTCAGTC | + |
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Preference number: 3 (lower is better) Translates to: GLVRSPSLDTCR*LVRSGCFHLSV Trigger: GACTGAGAGGTGGAAGCAGCCACTCCTGACGAGCCAGCGGCACGTGTCAAGAGATGGGCTCCTCACCAACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR-3UTR CAA 90 bp | GTTAGACATGAGAACTCGGAGAGCTCTCTCAAGCCTCTGCCCACACCCTGGCTGAGCGCTGGAGAGGAATaGCTTAGGAGAAACTCCCCT | + |
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Preference number: 3 (lower is better) Translates to: VRHENSESSLKPLPTPWLSAGEE*LRRNSP Trigger: AGGGGAGTTTCTCCTAAGCAATTCCTCTCCAGCGCT...CAGCCAGGGTGTGGGCAGAGGCTTGAGAGAGCTCTCCGAGTTCTCATGTCTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR TCA 72 bp | ATCAGGAGAGGGCAATGGGGTTGTGGCACTCCGTCATaGGGAGCGGGGAACATATACTCATGGATGGGAAAT | + |
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Preference number: 3 (lower is better) Translates to: IRRGQWGCGTPS*GAGNIYSWMGN Trigger: ATTTCCCATCCATGAGTATATGTTCCCCGCTCCTCATGACGGAGTGCCACAACCCCATTGCCCTCTCCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR GCA 72 bp | CTCATTGGGAAGGAAGGAACAGCGCTGGAGAGGAATTaGTTAGGAGAAACTCCCCTCACAGTGAGCTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: LIGKEGTALERN*LGETPLTVSSL Trigger: AAGGGAGCTCACTGTGAGGGGAGTTTCTCCTAAGCAATTCCTCTCCAGCGCTGTTCCTTCCTTCCCAATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR CCA 72 bp | GGACAGAGAGAACTGTCTTGGACAATGAGGGAAAGATaGGTAGCACAGAGGTTAAGTTCCCCTGGGGCCACT | + |
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Preference number: 3 (lower is better) Translates to: GQRELSWTMRER*VAQRLSSPGAT Trigger: AGTGGCCCCAGGGGAACTTAACCTCTGTGCTACCCATCTTTCCCTCATTGTCCAAGACAGTTCTCTCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR TCA 72 bp | AGAGCTGGTGCCCTAGTACAGCTGCAGCTTCAGAAATaGCATCTTGTGGTGCCACTCATTGGGAAGGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: RAGALVQLQLQK*HLVVPLIGKEG Trigger: TCCTTCCTTCCCAATGAGTGGCACCACAAGATGTCATTTCTGAAGCTGCAGCTGTACTAGGGCACCAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR-3UTR CAA 90 bp | CAAACAAACAAACAGACACCCCACCACATGACTAGGTCCAGATGTATAAAGCTGGAGCAGGTAGGTGGGTaGGTGAGGAGCCCATCTCTT | + |
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Preference number: 3 (lower is better) Translates to: QTNKQTPHHMTRSRCIKLEQVGG*VRSPSL Trigger: AAGAGATGGGCTCCTCACCAACCCACCTACCTGCTC...CAGCTTTATACATCTGGACCTAGTCATGTGGTGGGGTGTCTGTTTGTTTGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR-3UTR CAA 90 bp | GACCAGACACACCTCCAGCTTTGGGTAAGTCTTCTTAGAGCCCCAAGATGGTCCCAACACACTGTGTACTaGAATAGTTTCCCAAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: DQTHLQLWVSLLRAPRWSQHTVY*NSFPSC Trigger: GCAGCTTGGGAAACTATTCAAGTACACAGTGTGTTG...GGACCATCTTGGGGCTCTAAGAAGACTTACCCAAAGCTGGAGGTGTGTCTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR TCA 72 bp | AACACCAGACACTGGCCAGGTATCGTGGGGCATGCCTaGAATCTTGGCACTTGGAGAGTAAAGCAGATTACT | + |
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Preference number: 3 (lower is better) Translates to: NTRHWPGIVGHA*NLGTWRVKQIT Trigger: AGTAATCTGCTTTACTCTCCAAGTGCCAAGATTTCAGGCATGCCCCACGATACCTGGCCAGTGTCTGGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR CCA 72 bp | AAACTGTGTGTCGTGTCCACAGAGACACTAGCAGTGTaGGAGCAGGTATCTAGGAAGTTCCTAGTGCCTCAA | + |
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Preference number: 3 (lower is better) Translates to: KLCVVSTETLAV*EQVSRKFLVPQ Trigger: TTGAGGCACTAGGAACTTCCTAGATACCTGCTCCCACACTGCTAGTGTCTCTGTGGACACGACACACAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR CCA 72 bp | GCAGCTTCAGAAATGACATCTTGTGGTGCCACTCATTaGGAAGGAAGGAACAGCGCTGGAGAGGAATTGCTT | + |
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Preference number: 3 (lower is better) Translates to: AASEMTSCGATH*EGRNSAGEELL Trigger: AAGCAATTCCTCTCCAGCGCTGTTCCTTCCTTCCCAATGAGTGGCACCACAAGATGTCATTTCTGAAGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR CCA 72 bp | GTGGCTTCTCACAGCAGCTATAGAACAAAGTCTGGCTaGAAAAAGAAGAGCTGGTGCCCTAGTACAGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: VASHSSYRTKSG*KKKSWCPSTAA Trigger: TGCAGCTGTACTAGGGCACCAGCTCTTCTTTTTCCAGCCAGACTTTGTTCTATAGCTGCTGTGAGAAGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR-3UTR CAA 90 bp | GCCTCTGCCCACACCCTGGCTGCTGTTTTTGACTGTGGTTTAAGTTCAGGACTGAGATGTATAAAGCTGTaGAGGAAGAAAGGGCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: ASAHTLAAVFDCGLSSGLRCIKL*RKKGQE Trigger: TTCCTGCCCTTTCTTCCTCAACAGCTTTATACATCT...CAGTCCTGAACTTAAACCACAGTCAAAAACAGCAGCCAGGGTGTGGGCAGAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR TCA 72 bp | CACAGCTGGCCTACAATGGTACCAGCATTCTCTTCGTaGTCTCAACACACTGTGTACTTGAATAGTTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: HSWPTMVPAFSS*SQHTVYLNSFP Trigger: TGGGAAACTATTCAAGTACACAGTGTGTTGAGATCACGAAGAGAATGCTGGTACCATTGTAGGCCAGCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR CCA 72 bp | AGCTATAGAACAAAGTCTGGCTGGAAAAAGAAGAGCTaGTGCCCTAGTACAGCTGCAGCTTCAGAAATGACA | + |
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Preference number: 3 (lower is better) Translates to: SYRTKSGWKKKS*CPSTAAASEMT Trigger: TGTCATTTCTGAAGCTGCAGCTGTACTAGGGCACCAGCTCTTCTTTTTCCAGCCAGACTTTGTTCTATAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR GCA 72 bp | TATAGAACAAAGTCTGGCTGGAAAAAGAAGAGCTGGTaGCCTAGTACAGCTGCAGCTTCAGAAATGACATCT | + |
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Preference number: 3 (lower is better) Translates to: YRTKSGWKKKSW*PSTAAASEMTS Trigger: AGATGTCATTTCTGAAGCTGCAGCTGTACTAGGGCACCAGCTCTTCTTTTTCCAGCCAGACTTTGTTCTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR CCA 72 bp | AGCTCCCTTTTCAGTCAGTTGGCAGATAAAGCGCAGTaGTATTGGGAACAATCTCTTAGAGAAGTTTTCAGG | + |
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Preference number: 3 (lower is better) Translates to: SSLFSQLADKAQ*YWEQSLREVFR Trigger: CCTGAAAACTTCTCTAAGAGATTGTTCCCAATACCACTGCGCTTTATCTGCCAACTGACTGAAAAGGGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR TCA 72 bp | AGCTACATAATGAGCTCTGGTCTCCAAAGCCTAAAGTaGAAACAAAAACAAACAAACAAACAAACAGACACC | + |
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Preference number: 3 (lower is better) Translates to: SYIMSSGLQSLK*KQKQTNKQTDT Trigger: GGTGTCTGTTTGTTTGTTTGTTTGTTTTTGTTTTCACTTTAGGCTTTGGAGACCAGAGCTCATTATGTAGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR CCA 72 bp | TGTTATGAAATTGGTTTCAGAGTAAAGGTTATATGTTaGTATACAGAAGTAAACAGGAATGGTAGGAAACCC | + |
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Preference number: 3 (lower is better) Translates to: CYEIGFRVKVIC*YTEVNRNGRKP Trigger: GGGTTTCCTACCATTCCTGTTTACTTCTGTATACCAACATATAACCTTTACTCTGAAACCAATTTCATAACA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS-3UTR CCA 90 bp | AACAGAACACTAGTCAGGCATCAGGAGAGGGCAATGGGGTTGTGGCACTCCGTCGGGCACCAGCATGGCTaGATGATGAAGGCGGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: NRTLVRHQERAMGLWHSVGHQHG*MMKAVA Trigger: TGCCACCGCCTTCATCATCCAGCCATGCTGGTGCCC...GACGGAGTGCCACAACCCCATTGCCCTCTCCTGATGCCTGACTAGTGTTCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS-3UTR TCA 90 bp | GAGCAGGTAGGTGGGTTGGTGAGGAGCCCATCTCTTGACACGTGCCGCTGGCTCTTTTCTCAGGGTAGATaGTGCCATGCCAAATACTTC | + |
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Preference number: 4 (lower is better) Translates to: EQVGGLVRSPSLDTCRWLFSQGR*CHAKYF Trigger: GAAGTATTTGGCATGGCATCATCTACCCTGAGAAAA...GAGCCAGCGGCACGTGTCAAGAGATGGGCTCCTCACCAACCCACCTACCTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| 3UTR CAA 72 bp | AGAACACTAGTCAGGCATCAGGAGAGGGCAATGGGGTaGTGGCACTCCGTCATGAGGAGCGGGGAACATATA | + |
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Preference number: 4 (lower is better) Translates to: RTLVRHQERAMG*WHSVMRSGEHI Trigger: TATATGTTCCCCGCTCCTCATGACGGAGTGCCACAACCCCATTGCCCTCTCCTGATGCCTGACTAGTGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS-3UTR GCA 90 bp | GTTAGACATGAGAACTCGGAGAGCTCTCTCAAGCCTCTGCCCACACCCTGGCTGCCTCTTGAACGGTACTaGTTCCTGAGAAGTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VRHENSESSLKPLPTPWLPLERY*FLRSSG Trigger: ACCTGAACTTCTCAGGAAGCAGTACCGTTCAAGAGG...CAGCCAGGGTGTGGGCAGAGGCTTGAGAGAGCTCTCCGAGTTCTCATGTCTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| 3UTR CAA 72 bp | ACTCATTGGGAAGGAAGGAACAGCGCTGGAGAGGAATaGCTTAGGAGAAACTCCCCTCACAGTGAGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: THWEGRNSAGEE*LRRNSPHSELP Trigger: AGGGAGCTCACTGTGAGGGGAGTTTCTCCTAAGCAATTCCTCTCCAGCGCTGTTCCTTCCTTCCCAATGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR GCA 90 bp | AACAGAACACTAGTCAGGCATCAGGAGAGGGCAATGGGGTTGTGGCACTCCGTCTCTAGCATTCGAGGCTaGCTTTCTACAATCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NRTLVRHQERAMGLWHSVSSIRG*LSTICL Trigger: CAGGCAGATTGTAGAAAGGCAGCCTCGAATGCTAGA...GACGGAGTGCCACAACCCCATTGCCCTCTCCTGATGCCTGACTAGTGTTCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR GCA 90 bp | GACCAGACACACCTCCAGCTTTGGGTAAGTCTTCTTAGAGCCCCAAGATGGTCCCAATCTGGAGCTTATTaGTGGCCAGGAAACGCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: DQTHLQLWVSLLRAPRWSQSGAY*WPGNAV Trigger: AACGGCGTTTCCTGGCCAGCAATAAGCTCCAGATTG...GGACCATCTTGGGGCTCTAAGAAGACTTACCCAAAGCTGGAGGTGTGTCTGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CCA 90 bp | AACAGAACACTAGTCAGGCATCAGGAGAGGGCAATGGGGTTGTGGCACTCCGTCTACAATCTGCCTGGATaGCATTACAGGTCGAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: NRTLVRHQERAMGLWHSVYNLPG*HYRSKR Trigger: GCGTTTCGACCTGTAATGCCATCCAGGCAGATTGTA...GACGGAGTGCCACAACCCCATTGCCCTCTCCTGATGCCTGACTAGTGTTCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGTATCTAGGAAGTTCCTAGTGCCTCAAAAAGTTGAAGAGCAGCTTGCCCCAGGAACTCGCCACTaGGGGTTCGAATCCGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EQVSRKFLVPQKVEEQLAPGTRH*GFESEA Trigger: AGCTTCGGATTCGAACCCCCAGTGGCGAGTTCCTGG...GGCAAGCTGCTCTTCAACTTTTTGAGGCACTAGGAACTTCCTAGATACCTGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR TCA 90 bp | GTAGCACAGAGGTTAAGTTCCCCTGGGGCCACTCACACACAACAGAACACTAGTCAGCCCTCCCATAACTaGTGTCGAACAGGTATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VAQRLSSPGATHTQQNTSQPSHN*CRTGML Trigger: AAGCATACCTGTTCGACATCAGTTATGGGAGGGCTG...ACTAGTGTTCTGTTGTGTGTGAGTGGCCCCAGGGGAACTTAACCTCTGTGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR TCA 90 bp | GACCAGACACACCTCCAGCTTTGGGTAAGTCTTCTTAGAGCCCCAAGATGGTCCATACCAGTACATGCCTaGAAATCCGCAAGGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: DQTHLQLWVSLLRAPRWSIPVHA*KSARII Trigger: GATGATCCTTGCGGATTTTCAGGCATGTACTGGTAT...GGACCATCTTGGGGCTCTAAGAAGACTTACCCAAAGCTGGAGGTGTGTCTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR TCA 90 bp | GTTAGACATGAGAACTCGGAGAGCTCTCTCAAGCCTCTGCCCACACCCTGGCTGTTAGGCACAGGTATCTaGAGCTCATTTTCTAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: VRHENSESSLKPLPTPWLLGTGI*SSFSRI Trigger: GATTCTAGAAAATGAGCTTCAGATACCTGTGCCTAA...CAGCCAGGGTGTGGGCAGAGGCTTGAGAGAGCTCTCCGAGTTCTCATGTCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR TCA 90 bp | CAGGGGATGTTCATGGCTGAGCATCAGAGGAAAACAGGTGAACTTTCTTGGGCAACGGGTCTGTACAGGTaGAGTTCTTCTTCCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: QGMFMAEHQRKTGELSWATGLYR*SSSSHS Trigger: ACTGTGGGAAGAAGAACTTCACCTGTACAGACCCGT...TGCCCAAGAAAGTTCACCTGTTTTCCTCTGATGCTCAGCCATGAACATCCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR TCA 90 bp | CTTCTCACAGCAGCTATAGAACAAAGTCTGGCTGGAAAAAGAAGAGCTGGTGCCCGTGCTTTGCTCTTCTaGTTGCTCACGGGTCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLTAAIEQSLAGKRRAGARALLF*LLTGLY Trigger: GTACAGACCCGTGAGCAATCAGAAGAGCAAAGCACG...GGCACCAGCTCTTCTTTTTCCAGCCAGACTTTGTTCTATAGCTGCTGTGAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR TCA 90 bp | AACAGAACACTAGTCAGGCATCAGGAGAGGGCAATGGGGTTGTGGCACTCCGTCCTATCACTAACCATATaGACATCCGTGCTTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NRTLVRHQERAMGLWHSVLSLTI*TSVLCS Trigger: AGAGCAAAGCACGGATGTTCATATGGTTAGTGATAG...GACGGAGTGCCACAACCCCATTGCCCTCTCCTGATGCCTGACTAGTGTTCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR TCA 90 bp | CTTCTCACAGCAGCTATAGAACAAAGTCTGGCTGGAAAAAGAAGAGCTGGTGCCGCCATCTCTCTCTCATaGGCTTCTCTCTTTGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLTAAIEQSLAGKRRAGAAISLS*ASLFAL Trigger: CAGGGCAAAGAGAGAAGCTCATGAGAGAGAGATGGC...GGCACCAGCTCTTCTTTTTCCAGCCAGACTTTGTTCTATAGCTGCTGTGAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CCA 90 bp | GTAGCACAGAGGTTAAGTTCCCCTGGGGCCACTCACACACAACAGAACACTAGTATCAAATGTGGGTCCTaGCATGGTCTCACCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VAQRLSSPGATHTQQNTSIKCGS*HGLTSK Trigger: TTTGGAGGTGAGACCATGCCAGGACCCACATTTGAT...ACTAGTGTTCTGTTGTGTGTGAGTGGCCCCAGGGGAACTTAACCTCTGTGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| 3UTR CAA 72 bp | TGCAGCTTCAGAAATGACATCTTGTGGTGCCACTCATaGGGAAGGAAGGAACAGCGCTGGAGAGGAATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSFRNDILWCHS*GRKEQRWRGIA Trigger: AGCAATTCCTCTCCAGCGCTGTTCCTTCCTTCCCAATGAGTGGCACCACAAGATGTCATTTCTGAAGCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR TCA 90 bp | GTTAGACATGAGAACTCGGAGAGCTCTCTCAAGCCTCTGCCCACACCCTGGCTGATCAGCATGAAGTTTTaGTTTAATGATTCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VRHENSESSLKPLPTPWLISMKF*FNDSCR Trigger: CCTGCAGGAATCATTAAATCAAAACTTCATGCTGAT...CAGCCAGGGTGTGGGCAGAGGCTTGAGAGAGCTCTCCGAGTTCTCATGTCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR TCA 90 bp | GACAAGGTGTTTAAAACACCAGACACTGGCCAGGTATCGTGGGGCATGCCTGAATTATTGGGGTCTAGCTaGGTTACATCTCTCCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DKVFKTPDTGQVSWGMPELLGSS*VTSLLG Trigger: TCCTAGGAGAGATGTAACTCAGCTAGACCCCAATAA...TTCAGGCATGCCCCACGATACCTGGCCAGTGTCTGGTGTTTTAAACACCTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CCA 90 bp | AGTAGAGGAAAAAGTGACCAGACACACCTCCAGCTTTGGGTAAGTCTTCTTAGACGCTGGACCTCTCGGTaGGTGATGATCAGCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRGKSDQTHLQLWVSLLRRWTSR*VMISMK Trigger: CTTCATGCTGATCATCACCCACCGAGAGGTCCAGCG...TCTAAGAAGACTTACCCAAAGCTGGAGGTGTGTCTGGTCACTTTTTCCTCTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CCA 90 bp | GAGGAAGAAAGGGCAGGAAAACTGTGTGTCGTGTCCACAGAGACACTAGCAGTGGAAATCTTGCTCTGTTaGTGTCCTTTGTCAGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: EEERAGKLCVVSTETLAVEILLC*CPLSDP Trigger: GGGATCTGACAAAGGACACCAACAGAGCAAGATTTC...CACTGCTAGTGTCTCTGTGGACACGACACACAGTTTTCCTGCCCTTTCTTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| 3UTR CAA 72 bp | CACAGCATCCTGATGTCTAGGACAGAGAGAACTGTCTaGGACAATGAGGGAAAGATGGGTAGCACAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HSILMSRTERTV*DNEGKMGSTEV Trigger: AACCTCTGTGCTACCCATCTTTCCCTCATTGTCCAAGACAGTTCTCTCTGTCCTAGACATCAGGATGCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| 3UTR CAA 72 bp | CCCCACCACATGACTAGGTCCAGATGTATAAAGCTGTaGAGGAAGAAAGGGCAGGAAAACTGTGTGTCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PHHMTRSRCIKL*RKKGQENCVSC Trigger: ACACGACACACAGTTTTCCTGCCCTTTCTTCCTCAACAGCTTTATACATCTGGACCTAGTCATGTGGTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| 3UTR CAA 72 bp | GAAACTCCCCTCACAGTGAGCTCCCTTTTCAGTCAGTaGGCAGATAAAGCGCAGTGGTATTGGGAACAATCT | + |
|
Preference number: 4 (lower is better) Translates to: ETPLTVSSLFSQ*ADKAQWYWEQS Trigger: AGATTGTTCCCAATACCACTGCGCTTTATCTGCCAACTGACTGAAAAGGGAGCTCACTGTGAGGGGAGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR TCA 90 bp | GAGCAGGTATCTAGGAAGTTCCTAGTGCCTCAAAAAGTTGAAGAGCAGCTTGCCAACGGTACTGCTTCCTaGGAAGTTCAGGTTGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: EQVSRKFLVPQKVEEQLANGTAS*EVQVVL Trigger: GAGTACAACCTGAACTTCTCAGGAAGCAGTACCGTT...GGCAAGCTGCTCTTCAACTTTTTGAGGCACTAGGAACTTCCTAGATACCTGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CCA 90 bp | AGTAGAGGAAAAAGTGACCAGACACACCTCCAGCTTTGGGTAAGTCTTCTTAGAATGTGGGTCCTGGCATaGTCTCACCTCCAAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRGKSDQTHLQLWVSLLRMWVLA*SHLQSH Trigger: GTGACTTTGGAGGTGAGACCATGCCAGGACCCACAT...TCTAAGAAGACTTACCCAAAGCTGGAGGTGTGTCTGGTCACTTTTTCCTCTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CCA 90 bp | GCCTCTGCCCACACCCTGGCTGCTGTTTTTGACTGTGGTTTAAGTTCAGGACTGTCTTCACATTTTCTCTaGCTTCACGTTCATCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASAHTLAAVFDCGLSSGLSSHFL*LHVHPH Trigger: ATGAGGATGAACGTGAAGCCAGAGAAAATGTGAAGA...CAGTCCTGAACTTAAACCACAGTCAAAAACAGCAGCCAGGGTGTGGGCAGAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CCA 90 bp | CAAACAAACAAACAGACACCCCACCACATGACTAGGTCCAGATGTATAAAGCTGTCTGGAGCTTATTGCTaGCCAGGAAACGCCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQTPHHMTRSRCIKLSGAYC*PGNAVP Trigger: TGGAACGGCGTTTCCTGGCCAGCAATAAGCTCCAGA...CAGCTTTATACATCTGGACCTAGTCATGTGGTGGGGTGTCTGTTTGTTTGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CCA 90 bp | CAGGGGATGTTCATGGCTGAGCATCAGAGGAAAACAGGTGAACTTTCTTGGGCACCCATGGAAATCCCTTaGAAGCCACGAAATCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGMFMAEHQRKTGELSWAPMEIP*KPRNQR Trigger: TCTTTGATTTCGTGGCTTCCAAGGGATTTCCATGGG...TGCCCAAGAAAGTTCACCTGTTTTCCTCTGATGCTCAGCCATGAACATCCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR TCA 90 bp | GTAGCACAGAGGTTAAGTTCCCCTGGGGCCACTCACACACAACAGAACACTAGTGCAGTCACCATATCTTaGAGAAAACTCTGCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VAQRLSSPGATHTQQNTSAVTIS*RKLCCK Trigger: TTTACAGCAGAGTTTTCTTCAAGATATGGTGACTGC...ACTAGTGTTCTGTTGTGTGTGAGTGGCCCCAGGGGAACTTAACCTCTGTGCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR TCA 90 bp | GTAGCACAGAGGTTAAGTTCCCCTGGGGCCACTCACACACAACAGAACACTAGTATGTCTTCCTGTTGTTaGGCTGAGAAAATCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VAQRLSSPGATHTQQNTSMSSCC*AEKISI Trigger: AATGGAGATTTTCTCAGCTCAACAACAGGAAGACAT...ACTAGTGTTCTGTTGTGTGTGAGTGGCCCCAGGGGAACTTAACCTCTGTGCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR TCA 90 bp | CTTCTCACAGCAGCTATAGAACAAAGTCTGGCTGGAAAAAGAAGAGCTGGTGCCAGGAAAAGGGTTTCTTaGGGGAACAAGTTTACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLTAAIEQSLAGKRRAGARKRVS*GNKFTS Trigger: GGAGGTAAACTTGTTCCCTCAAGAAACCCTTTTCCT...GGCACCAGCTCTTCTTTTTCCAGCCAGACTTTGTTCTATAGCTGCTGTGAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR GCA 90 bp | CTTCTCACAGCAGCTATAGAACAAAGTCTGGCTGGAAAAAGAAGAGCTGGTGCCCAAACGAAACTGTTCTaGCATCTCTCTCTCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLTAAIEQSLAGKRRAGAQTKLF*HLSLMS Trigger: GCTCATGAGAGAGAGATGGCAGAACAGTTTCGTTTG...GGCACCAGCTCTTCTTTTTCCAGCCAGACTTTGTTCTATAGCTGCTGTGAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CCA 90 bp | CAGGGGATGTTCATGGCTGAGCATCAGAGGAAAACAGGTGAACTTTCTTGGGCATTTCTACAATCTGCCTaGATGGCATTACAGGTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: QGMFMAEHQRKTGELSWAFLQSA*MALQVE Trigger: TTCGACCTGTAATGCCATCCAGGCAGATTGTAGAAA...TGCCCAAGAAAGTTCACCTGTTTTCCTCTGATGCTCAGCCATGAACATCCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CCA 90 bp | ACAAGGTGTTTAAAACACCAGACACTGGCCAGGTATCGTGGGGCATGCCTGAAAAAATCAAAGACAATCTaGAGCTTATTGCTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRCLKHQTLARYRGACLKKSKTI*SLLLAR Trigger: CCTGGCCAGCAATAAGCTCCAGATTGTCTTTGATTT...TTTCAGGCATGCCCCACGATACCTGGCCAGTGTCTGGTGTTTTAAACACCTTGT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR TCA 90 bp | ACAAGGTGTTTAAAACACCAGACACTGGCCAGGTATCGTGGGGCATGCCTGAAATTTCTAGAATCTGTTTaGTCTCTCCAACAGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TRCLKHQTLARYRGACLKFLESV*SLQQYS Trigger: GCTGTACTGTTGGAGAGATCAAACAGATTCTAGAAA...TTTCAGGCATGCCCCACGATACCTGGCCAGTGTCTGGTGTTTTAAACACCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR GCA 90 bp | CAAACAAACAAACAGACACCCCACCACATGACTAGGTCCAGATGTATAAAGCTGCTTTGCTCTTCTGATTaGTCACGGGTCTGTACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQTPHHMTRSRCIKLLCSSD*SRVCTG Trigger: ACCTGTACAGACCCGTGAGCAATCAGAAGAGCAAAG...CAGCTTTATACATCTGGACCTAGTCATGTGGTGGGGTGTCTGTTTGTTTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR GCA 90 bp | CTTCTCACAGCAGCTATAGAACAAAGTCTGGCTGGAAAAAGAAGAGCTGGTGCCAGTCCGAATAGTTTGTaGAATAACGCTGCCAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLTAAIEQSLAGKRRAGASPNSL*NNAAKV Trigger: CACTTTGGCAGCGTTATTGCACAAACTATTCGGACT...GGCACCAGCTCTTCTTTTTCCAGCCAGACTTTGTTCTATAGCTGCTGTGAGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR TCA 90 bp | CAAACAAACAAACAGACACCCCACCACATGACTAGGTCCAGATGTATAAAGCTGCTCTGTATTCAACTCTaGAGTCTAGCATTCGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQTPHHMTRSRCIKLLCIQL*SLAFEA Trigger: AGCCTCGAATGCTAGACTTCAGAGTTGAATACAGAG...CAGCTTTATACATCTGGACCTAGTCATGTGGTGGGGTGTCTGTTTGTTTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR TCA 90 bp | GAGCAGGTATCTAGGAAGTTCCTAGTGCCTCAAAAAGTTGAAGAGCAGCTTGCCATCCACTCCAAATTCTaGAGCATCTTCAAAGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: EQVSRKFLVPQKVEEQLAIHSKF*SIFKVI Trigger: GATGACTTTGAAGATGCTTCAGAATTTGGAGTGGAT...GGCAAGCTGCTCTTCAACTTTTTGAGGCACTAGGAACTTCCTAGATACCTGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CCA 90 bp | TGCACTTCTACTAAATCAAACCCAAGATTACTATGTATCAATTCTGGCAACACAAGGTTGTACTCCCGCTaGACCTCTCGGTGGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: CTSTKSNPRLLCINSGNTRLYSR*TSRWVM Trigger: CATCACCCACCGAGAGGTCCAGCGGGAGTACAACCT...TGTGTTGCCAGAATTGATACATAGTAATCTTGGGTTTGATTTAGTAGAAGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CCA 90 bp | AGTAGAGGAAAAAGTGACCAGACACACCTCCAGCTTTGGGTAAGTCTTCTTAGACTTGAATTCATCCCATaGAAATCCCTTGGAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRGKSDQTHLQLWVSLLRLEFIP*KSLGSH Trigger: GTGGCTTCCAAGGGATTTCCATGGGATGAATTCAAG...TCTAAGAAGACTTACCCAAAGCTGGAGGTGTGTCTGGTCACTTTTTCCTCTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR TCA 90 bp | CAAACAAACAAACAGACACCCCACCACATGACTAGGTCCAGATGTATAAAGCTGAGGTGCTCAGTAACTTaGATTCATCCCATGGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: QTNKQTPHHMTRSRCIKLRCSVT*IHPMEI Trigger: GATTTCCATGGGATGAATTCAAGTTACTGAGCACCT...CAGCTTTATACATCTGGACCTAGTCATGTGGTGGGGTGTCTGTTTGTTTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR GCA 90 bp | GAGCAGGTATCTAGGAAGTTCCTAGTGCCTCAAAAAGTTGAAGAGCAGCTTGCCAAGTCCCAGTTATTTTaGTCAAGCAGTGTAATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EQVSRKFLVPQKVEEQLAKSQLF*SSSVIA Trigger: AGCTATTACACTGCTTGAGCAAAATAACTGGGACTT...GGCAAGCTGCTCTTCAACTTTTTGAGGCACTAGGAACTTCCTAGATACCTGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CCA 90 bp | ACTATGTATCAATTCTGGCAACACATGTATTATAGGCTAAGCCCCCACATTTGCAGGCGGTGGCAAGTCTaGTGTAAGGACATAAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: TMYQFWQHMYYRLSPHICRRWQV*CKDIKT Trigger: AGTCTTTATGTCCTTACACCAGACTTGCCACCGCCT...GCAAATGTGGGGGCTTAGCCTATAATACATGTGTTGCCAGAATTGATACATAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR TCA 90 bp | TTCATGGCTGAGCATCAGAGGAAAACAGGTGAACTTTCTTGGGCAATACTTTCTTCTCCATTGCAGCCATaGGTCTCATCATTAACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FMAEHQRKTGELSWAILSSPLQP*VSSLTH Trigger: ATGAGTTAATGATGAGACTCATGGCTGCAATGGAGA...AGAAAGTATTGCCCAAGAAAGTTCACCTGTTTTCCTCTGATGCTCAGCCATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR GCA 90 bp | ACTATGTATCAATTCTGGCAACACATGTATTATAGGCTAAGCCCCCACATTTGCTGCCTTTCTACAATCTaGCTGGATGGCATTACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TMYQFWQHMYYRLSPHICCLSTI*LDGITG Trigger: ACCTGTAATGCCATCCAGGCAGATTGTAGAAAGGCA...GCAAATGTGGGGGCTTAGCCTATAATACATGTGTTGCCAGAATTGATACATAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CCA 90 bp | ATTAGATTTTGGCAACGGACAAGGTGTTTAAAACACCAGACACTGGCCAGGTATGTTTTCTGGCATCATTaGAGATTTTCTCAGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: IRFWQRTRCLKHQTLARYVFWHH*RFSQGR Trigger: TCTACCCTGAGAAAATCTCCAATGATGCCAGAAAAC...ATACCTGGCCAGTGTCTGGTGTTTTAAACACCTTGTCCGTTGCCAAAATCTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR GCA 90 bp | TTCATGGCTGAGCATCAGAGGAAAACAGGTGAACTTTCTTGGGCAATACTTTCTTGCCAAAGTGTCTATTaGACATTGTCAGAAATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FMAEHQRKTGELSWAILSCQSVY*TLSEIL Trigger: CAAGATTTCTGACAATGTGCAATAGACACTTTGGCA...AGAAAGTATTGCCCAAGAAAGTTCACCTGTTTTCCTCTGATGCTCAGCCATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CCA 90 bp | ACTATGTATCAATTCTGGCAACACATGTATTATAGGCTAAGCCCCCACATTTGCGTGAGCAGAACACGTTaGTTAGTACACTTTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: TMYQFWQHMYYRLSPHICVSRTR*LVHFHH Trigger: ATGATGAAAGTGTACTAACCAACGTGTTCTGCTCAC...GCAAATGTGGGGGCTTAGCCTATAATACATGTGTTGCCAGAATTGATACATAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CAA 90 bp | GAGCAGGTAGGTGGGTTGGTGAGGAGCCCATCTCTTGACACGTGCCGCTGGCTCCCTGAGAAGTTCAGGTaGTACTCCCGCTGGACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: EQVGGLVRSPSLDTCRWLPEKFR*YSRWTS Trigger: AGAGGTCCAGCGGGAGTACAACCTGAACTTCTCAGG...GAGCCAGCGGCACGTGTCAAGAGATGGGCTCCTCACCAACCCACCTACCTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS CCA 90 bp | ATCCCTTGGAAGCCACGAAATCAAAGACAATCTGGAGCTTATTGCTaGCCAGGAAACGCCGTTCCAGGAACTCGCCACTGGGGGTTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: IPWKPRNQRQSGAYC*PGNAVPGTRHWGFE Trigger: TTCGAACCCCCAGTGGCGAGTTCCTGGAACGGCGTTTCCTGGCCAGCAATAAGCTCCAGATTGTCTTTGATTTCGTGGCTTCCAAGGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CAA 90 bp | AACAGAACACTAGTCAGGCATCAGGAGAGGGCAATGGGGTTGTGGCACTCCGTCTCCCATGGAAATCCCTaGGAAGCCACGAAATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NRTLVRHQERAMGLWHSVSHGNP*EATKSK Trigger: CTTTGATTTCGTGGCTTCCAAGGGATTTCCATGGGA...GACGGAGTGCCACAACCCCATTGCCCTCTCCTGATGCCTGACTAGTGTTCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS CCA 90 bp | AAGAGGGAGTTGAAGCTGGAGCAGGGTGACTTGCTGGATCAAATGTaGGTCCTGGCATGGTCTCACCTCCAAAGTCACTTTGTAGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: KRELKLEQGDLLDQM*VLAWSHLQSHFVEC Trigger: GCATTCTACAAAGTGACTTTGGAGGTGAGACCATGCCAGGACCCACATTTGATCCAGCAAGTCACCCTGCTCCAGCTTCAACTCCCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS CCA 90 bp | TCATCCCATGGAAATCCCTTGGAAGCCACGAAATCAAAGACAATCTaGAGCTTATTGCTGGCCAGGAAACGCCGTTCCAGGAACTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSHGNPLEATKSKTI*SLLLARKRRSRNSP Trigger: TGGCGAGTTCCTGGAACGGCGTTTCCTGGCCAGCAATAAGCTCCAGATTGTCTTTGATTTCGTGGCTTCCAAGGGATTTCCATGGGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CAA 90 bp | CAGGGGATGTTCATGGCTGAGCATCAGAGGAAAACAGGTGAACTTTCTTGGGCAACAATCTGGAGCTTATaGCTGGCCAGGAAACGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: QGMFMAEHQRKTGELSWATIWSL*LARKRR Trigger: ACGGCGTTTCCTGGCCAGCAATAAGCTCCAGATTGT...TGCCCAAGAAAGTTCACCTGTTTTCCTCTGATGCTCAGCCATGAACATCCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS TCA 90 bp | TACTCCCGCTGGACCTCTCGGTGGGTGATGATCAGCATGAAGTTTTaGTTTAATGATTCCTGCAGGGCACCAGCATGGCTGGATGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: YSRWTSRWVMISMKF*FNDSCRAPAWLDDE Trigger: TTCATCATCCAGCCATGCTGGTGCCCTGCAGGAATCATTAAATCAAAACTTCATGCTGATCATCACCCACCGAGAGGTCCAGCGGGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS TCA 90 bp | TTTCTTCCTTCGGCTCTGGAGGAAGGGCTTGTTCTAAGGAGAGTCTaGTGGCCTCACGTTCTTCTTCTTGTTCTTTGCGAATCTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLPSALEEGLVLRRV*WPHVLLLVLCESAP Trigger: TGGAGCAGATTCGCAAAGAACAAGAAGAAGAACGTGAGGCCATCAGACTCTCCTTAGAACAAGCCCTTCCTCCAGAGCCGAAGGAAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CAA 90 bp | CAAACAAACAAACAGACACCCCACCACATGACTAGGTCCAGATGTATAAAGCTGCTGAAGAAGAGGGAGTaGAAGCTGGAGCAGGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: QTNKQTPHHMTRSRCIKLLKKRE*KLEQGD Trigger: GTCACCCTGCTCCAGCTTCAACTCCCTCTTCTTCAG...CAGCTTTATACATCTGGACCTAGTCATGTGGTGGGGTGTCTGTTTGTTTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CAA 90 bp | GTTAGACATGAGAACTCGGAGAGCTCTCTCAAGCCTCTGCCCACACCCTGGCTGTTTTCTAGAATCTGTTaGATCTCTCCAACAGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: VRHENSESSLKPLPTPWLFSRIC*ISPTVQ Trigger: CTGTACTGTTGGAGAGATCAAACAGATTCTAGAAAA...CAGCCAGGGTGTGGGCAGAGGCTTGAGAGAGCTCTCCGAGTTCTCATGTCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CAA 90 bp | GACAAGGTGTTTAAAACACCAGACACTGGCCAGGTATCGTGGGGCATGCCTGAATGTGAGCAGAACACGTaGGTTAGTACACTTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: DKVFKTPDTGQVSWGMPECEQNT*VSTLSS Trigger: TGATGAAAGTGTACTAACCAACGTGTTCTGCTCACA...TTCAGGCATGCCCCACGATACCTGGCCAGTGTCTGGTGTTTTAAACACCTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CAA 90 bp | TTCATGGCTGAGCATCAGAGGAAAACAGGTGAACTTTCTTGGGCAATACTTTCTCTCTGTTGGTGTCCTTaGTCAGATCCCAAGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FMAEHQRKTGELSWAILSLCWCP*SDPKPR Trigger: CCTGGGCTTGGGATCTGACAAAGGACACCAACAGAG...AGAAAGTATTGCCCAAGAAAGTTCACCTGTTTTCCTCTGATGCTCAGCCATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CAA 90 bp | GCCTCTGCCCACACCCTGGCTGCTGTTTTTGACTGTGGTTTAAGTTCAGGACTGAAACTGATCTGTCTTTaGAGTCCGAATAGTTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ASAHTLAAVFDCGLSSGLKLICL*SPNSLC Trigger: GCACAAACTATTCGGACTCAAAAGACAGATCAGTTT...CAGTCCTGAACTTAAACCACAGTCAAAAACAGCAGCCAGGGTGTGGGCAGAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CAA 90 bp | GAGGAAGAAAGGGCAGGAAAACTGTGTGTCGTGTCCACAGAGACACTAGCAGTGTCTTCTTCTTGTTCTTaGCGAATCTGCTCCAAACGA | + |
|
Preference number: 5 (lower is better) Translates to: EEERAGKLCVVSTETLAVSSSCS*RICSKR Trigger: TCGTTTGGAGCAGATTCGCAAAGAACAAGAAGAAGA...CACTGCTAGTGTCTCTGTGGACACGACACACAGTTTTCCTGCCCTTTCTTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS-3UTR CAA 90 bp | GCCTCTGCCCACACCCTGGCTGCTGTTTTTGACTGTGGTTTAAGTTCAGGACTGAAGGTGCTCAGTAACTaGAATTCATCCCATGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: ASAHTLAAVFDCGLSSGLKVLSN*NSSHGN Trigger: ATTTCCATGGGATGAATTCAAGTTACTGAGCACCTT...CAGTCCTGAACTTAAACCACAGTCAAAAACAGCAGCCAGGGTGTGGGCAGAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CAA 90 bp | GTAGCACAGAGGTTAAGTTCCCCTGGGGCCACTCACACACAACAGAACACTAGTAAGGAAAAGGGTTTCTaGAGGGAACAAGTTTACCTC | + |
|
Preference number: 5 (lower is better) Translates to: VAQRLSSPGATHTQQNTSKEKGF*REQVYL Trigger: GAGGTAAACTTGTTCCCTCAAGAAACCCTTTTCCTT...ACTAGTGTTCTGTTGTGTGTGAGTGGCCCCAGGGGAACTTAACCTCTGTGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS GCA 90 bp | TATTCAACTCTGAAGTCTAGCATTCGAGGCTGCCTTTCTACAATCTaGCTGGATGGCATTACAGGTCGAAACGCTGAAGAAGAGGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: YSTLKSSIRGCLSTI*LDGITGRNAEEEGV Trigger: AACTCCCTCTTCTTCAGCGTTTCGACCTGTAATGCCATCCAGGCAGATTGTAGAAAGGCAGCCTCGAATGCTAGACTTCAGAGTTGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS GCA 90 bp | TTCTTCTTCTTGTTCTTTGCGAATCTGCTCCAAACGAAACTGTTCTaGCATCTCTCTCTCATGAGCTTCTCTCTTTGCCCTGTCGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FFFLFFANLLQTKLF*HLSLMSFSLCPVGF Trigger: GAAGCCGACAGGGCAAAGAGAGAAGCTCATGAGAGAGAGATGGCAGAACAGTTTCGTTTGGAGCAGATTCGCAAAGAACAAGAAGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS-3UTR CAA 90 bp | ACAAGGTGTTTAAAACACCAGACACTGGCCAGGTATCGTGGGGCATGCCTGAAACTGCCAAAGTGTCTATaGCACATTGTCAGAAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: TRCLKHQTLARYRGACLKLPKCL*HIVRNL Trigger: AAGATTTCTGACAATGTGCAATAGACACTTTGGCAG...TTTCAGGCATGCCCCACGATACCTGGCCAGTGTCTGGTGTTTTAAACACCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS TCA 90 bp | TCTGAAGCATCTTCAAAGTCATCGCCATCACTATCACTAACCATATaGACATCCGTGCTTTGCTCTTCTGATTGCTCACGGGTCTGTACA | + |
|
Preference number: 5 (lower is better) Translates to: SEASSKSSPSLSLTI*TSVLCSSDCSRVCT Trigger: TGTACAGACCCGTGAGCAATCAGAAGAGCAAAGCACGGATGTTCATATGGTTAGTGATAGTGATGGCGATGACTTTGAAGATGCTTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CAA 90 bp | CAAACAAACAAACAGACACCCCACCACATGACTAGGTCCAGATGTATAAAGCTGCTCACGTTCTTCTTCTaGTTCTTTGCGAATCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QTNKQTPHHMTRSRCIKLLTFFF*FFANLL Trigger: GAGCAGATTCGCAAAGAACAAGAAGAAGAACGTGAG...CAGCTTTATACATCTGGACCTAGTCATGTGGTGGGGTGTCTGTTTGTTTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS-3UTR CAA 90 bp | ATTAGATTTTGGCAACGGACAAGGTGTTTAAAACACCAGACACTGGCCAGGTATGTTCGAATCCGAAGCTaGCTAACAGGCTCAGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: IRFWQRTRCLKHQTLARYVRIRS*LTGSAF Trigger: AAATGCTGAGCCTGTTAGCAAGCTTCGGATTCGAAC...ATACCTGGCCAGTGTCTGGTGTTTTAAACACCTTGTCCGTTGCCAAAATCTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS TCA 90 bp | TGTCTTCAAGTACCACATCAACATTTCTGTCTCTGTATTCAACTCTaGAGTCTAGCATTCGAGGCTGCCTTTCTACAATCTGCCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: CLQVPHQHFCLCIQL*SLAFEAAFLQSAWM Trigger: CATCCAGGCAGATTGTAGAAAGGCAGCCTCGAATGCTAGACTTCAGAGTTGAATACAGAGACAGAAATGTTGATGTGGTACTTGAAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS TCA 90 bp | TCTCTGGCTTCACGTTCATCCTCATCCTTAATGTCTTCCTGTTGTTaGGCTGAGAAAATCTCCATTGCAGCCATGAGTCTCATCATTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SLASRSSSSLMSSCC*AEKISIAAMSLIIN Trigger: GTTAATGATGAGACTCATGGCTGCAATGGAGATTTTCTCAGCTCAACAACAGGAAGACATTAAGGATGAGGATGAACGTGAAGCCAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS-3UTR CAA 90 bp | TTCATGGCTGAGCATCAGAGGAAAACAGGTGAACTTTCTTGGGCAATACTTTCTAGAAATCTTGCTCTGTaGGTGTCCTTTGTCAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: FMAEHQRKTGELSWAILSRNLAL*VSFVRS Trigger: GGATCTGACAAAGGACACCAACAGAGCAAGATTTCT...AGAAAGTATTGCCCAAGAAAGTTCACCTGTTTTCCTCTGATGCTCAGCCATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS-3UTR CAA 90 bp | TTCATGGCTGAGCATCAGAGGAAAACAGGTGAACTTTCTTGGGCAATACTTTCTACATTGTCAGAAATCTaGCTCTGTTGGTGTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FMAEHQRKTGELSWAILSTLSEI*LCWCPL Trigger: CAAAGGACACCAACAGAGCAAGATTTCTGACAATGT...AGAAAGTATTGCCCAAGAAAGTTCACCTGTTTTCCTCTGATGCTCAGCCATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS GCA 90 bp | CAGGAAAAGTGGAAACTGATCTGTCTTTTGAGTCCGAATAGTTTGTaGAATAACGCTGCCAAAGTGTCTATTGCACATTGTCAGAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: QEKWKLICLLSPNSL*NNAAKVSIAHCQKS Trigger: AGATTTCTGACAATGTGCAATAGACACTTTGGCAGCGTTATTGCACAAACTATTCGGACTCAAAAGACAGATCAGTTTCCACTTTTCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS-3UTR CAA 90 bp | TGCACTTCTACTAAATCAAACCCAAGATTACTATGTATCAATTCTGGCAACACATTGAGTCCGAATAGTTaGTGCAATAACGCTGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: CTSTKSNPRLLCINSGNTLSPNS*CNNAAK Trigger: TTTGGCAGCGTTATTGCACAAACTATTCGGACTCAA...TGTGTTGCCAGAATTGATACATAGTAATCTTGGGTTTGATTTAGTAGAAGTGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS CAA 90 bp | AAACGCCGTTCCAGGAACTCGCCACTGGGGGTTCGAATCCGAAGCTaGCTAACAGGCTCAGCATTTTCTTCCTTCGGCTCTGGAGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: KRRSRNSPLGVRIRS*LTGSAFSSFGSGGR Trigger: CCTTCCTCCAGAGCCGAAGGAAGAAAATGCTGAGCCTGTTAGCAAGCTTCGGATTCGAACCCCCAGTGGCGAGTTCCTGGAACGGCGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS CCA 72 bp | AGAGGCCTGATTCAGCAAGACACATTGAGTCATCGGTaGCAGAAGCTGGCCAGCCCTCCCATAACTGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: RGLIQQDTLSHR*QKLASPPITDV Trigger: GACATCAGTTATGGGAGGGCTGGCCAGCTTCTGCCACCGATGACTCAATGTGTCTTGCTGAATCAGGCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS CAA 72 bp | TCCAGGAACTCGCCACTGGGGGTTCGAATCCGAAGCTaGCTAACAGGCTCAGCATTTTCTTCCTTCGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SRNSPLGVRIRS*LTGSAFSSFGS Trigger: AGAGCCGAAGGAAGAAAATGCTGAGCCTGTTAGCAAGCTTCGGATTCGAACCCCCAGTGGCGAGTTCCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS CAA 90 bp | TCTGCCTGGATGGCATTACAGGTCGAAACGCTGAAGAAGAGGGAGTaGAAGCTGGAGCAGGGTGACTTGCTGGATCAAATGTGGGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SAWMALQVETLKKRE*KLEQGDLLDQMWVL Trigger: CAGGACCCACATTTGATCCAGCAAGTCACCCTGCTCCAGCTTCAACTCCCTCTTCTTCAGCGTTTCGACCTGTAATGCCATCCAGGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS CAA 90 bp | GGAAATCCCTTGGAAGCCACGAAATCAAAGACAATCTGGAGCTTATaGCTGGCCAGGAAACGCCGTTCCAGGAACTCGCCACTGGGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GNPLEATKSKTIWSL*LARKRRSRNSPLGV Trigger: AACCCCCAGTGGCGAGTTCCTGGAACGGCGTTTCCTGGCCAGCAATAAGCTCCAGATTGTCTTTGATTTCGTGGCTTCCAAGGGATTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS CCA 72 bp | AAGCCACGAAATCAAAGACAATCTGGAGCTTATTGCTaGCCAGGAAACGCCGTTCCAGGAACTCGCCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: KPRNQRQSGAYC*PGNAVPGTRHW Trigger: CCAGTGGCGAGTTCCTGGAACGGCGTTTCCTGGCCAGCAATAAGCTCCAGATTGTCTTTGATTTCGTGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS CAA 90 bp | TCTCTTTGCCCTGTCGGCTTCGAGGGAAAGGCGATAGGCCTCATCTaGCTCTCTCTTCACATTTTCTCTGGCTTCACGTTCATCCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: SLCPVGFEGKAIGLI*LSLHIFSGFTFILI Trigger: GATGAGGATGAACGTGAAGCCAGAGAAAATGTGAAGAGAGAGCAAGATGAGGCCTATCGCCTTTCCCTCGAAGCCGACAGGGCAAAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS TCA 72 bp | TCATCGGTGGCAGAAGCTGGCCAGCCCTCCCATAACTaGTGTCGAACAGGTATGCTTGTAAGGTCATACACA | + |
|
Preference number: 6 (lower is better) Translates to: SSVAEAGQPSHN*CRTGMLVRSYT Trigger: TGTGTATGACCTTACAAGCATACCTGTTCGACATCAGTTATGGGAGGGCTGGCCAGCTTCTGCCACCGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS TCA 72 bp | TGCTCCAAACGAAACTGTTCTGCCATCTCTCTCTCATaGGCTTCTCTCTTTGCCCTGTCGGCTTCGAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: CSKRNCSAISLS*ASLFALSASRE Trigger: TTCCCTCGAAGCCGACAGGGCAAAGAGAGAAGCTCATGAGAGAGAGATGGCAGAACAGTTTCGTTTGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS CCA 72 bp | TTGAAGCTGGAGCAGGGTGACTTGCTGGATCAAATGTaGGTCCTGGCATGGTCTCACCTCCAAAGTCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: LKLEQGDLLDQM*VLAWSHLQSHF Trigger: AAAGTGACTTTGGAGGTGAGACCATGCCAGGACCCACATTTGATCCAGCAAGTCACCCTGCTCCAGCTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS CAA 72 bp | TTGGAAGCCACGAAATCAAAGACAATCTGGAGCTTATaGCTGGCCAGGAAACGCCGTTCCAGGAACTCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LEATKSKTIWSL*LARKRRSRNSP Trigger: TGGCGAGTTCCTGGAACGGCGTTTCCTGGCCAGCAATAAGCTCCAGATTGTCTTTGATTTCGTGGCTTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS TCA 72 bp | TGGACCTCTCGGTGGGTGATGATCAGCATGAAGTTTTaGTTTAATGATTCCTGCAGGGCACCAGCATGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: WTSRWVMISMKF*FNDSCRAPAWL Trigger: CAGCCATGCTGGTGCCCTGCAGGAATCATTAAATCAAAACTTCATGCTGATCATCACCCACCGAGAGGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS TCA 72 bp | CACATTTCTCTTTACCTCTTGAACGGTACTGCTTCCTaGGAAGTTCAGGTTGTACTCCCGCTGGACCTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: HISLYLLNGTAS*EVQVVLPLDLS Trigger: CGAGAGGTCCAGCGGGAGTACAACCTGAACTTCTCAGGAAGCAGTACCGTTCAAGAGGTAAAGAGAAATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS CCA 72 bp | CAGGGTGACTTGCTGGATCAAATGTGGGTCCTGGCATaGTCTCACCTCCAAAGTCACTTTGTAGAATGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: QGDLLDQMWVLA*SHLQSHFVECH Trigger: ATGGCATTCTACAAAGTGACTTTGGAGGTGAGACCATGCCAGGACCCACATTTGATCCAGCAAGTCACCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS CCA 72 bp | AGTCTAGCATTCGAGGCTGCCTTTCTACAATCTGCCTaGATGGCATTACAGGTCGAAACGCTGAAGAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLAFEAAFLQSA*MALQVETLKKR Trigger: CCTCTTCTTCAGCGTTTCGACCTGTAATGCCATCCAGGCAGATTGTAGAAAGGCAGCCTCGAATGCTAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS CAA 72 bp | ATGGCATTACAGGTCGAAACGCTGAAGAAGAGGGAGTaGAAGCTGGAGCAGGGTGACTTGCTGGATCAAATG | + |
|
Preference number: 6 (lower is better) Translates to: MALQVETLKKRE*KLEQGDLLDQM Trigger: CATTTGATCCAGCAAGTCACCCTGCTCCAGCTTCAACTCCCTCTTCTTCAGCGTTTCGACCTGTAATGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS GCA 72 bp | CTGAAGTCTAGCATTCGAGGCTGCCTTTCTACAATCTaGCTGGATGGCATTACAGGTCGAAACGCTGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LKSSIRGCLSTI*LDGITGRNAEE Trigger: TTCTTCAGCGTTTCGACCTGTAATGCCATCCAGGCAGATTGTAGAAAGGCAGCCTCGAATGCTAGACTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
||
| CDS GCA 72 bp | GGTCATACACATTTCTCTTTACCTCTTGAACGGTACTaGTTCCTGAGAAGTTCAGGTTGTACTCCCGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GHTHFSLPLERY*FLRSSGCTPAG Trigger: TCCAGCGGGAGTACAACCTGAACTTCTCAGGAAGCAGTACCGTTCAAGAGGTAAAGAGAAATGTGTATGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS CAA 72 bp | GAGAGTCTGATGGCCTCACGTTCTTCTTCTTGTTCTTaGCGAATCTGCTCCAAACGAAACTGTTCTGCCATC | + |
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Preference number: 6 (lower is better) Translates to: ESLMASRSSSCS*RICSKRNCSAI Trigger: GATGGCAGAACAGTTTCGTTTGGAGCAGATTCGCAAAGAACAAGAAGAAGAACGTGAGGCCATCAGACTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS CAA 90 bp | TGTTCTAAGGAGAGTCTGATGGCCTCACGTTCTTCTTCTTGTTCTTaGCGAATCTGCTCCAAACGAAACTGTTCTGCCATCTCTCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: CSKESLMASRSSSCS*RICSKRNCSAISLS Trigger: TGAGAGAGAGATGGCAGAACAGTTTCGTTTGGAGCAGATTCGCAAAGAACAAGAAGAAGAACGTGAGGCCATCAGACTCTCCTTAGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS GCA 72 bp | TCTCTGTATTCAACTCTGAAGTCTAGCATTCGAGGCTaGCTTTCTACAATCTGCCTGGATGGCATTACAGGT | + |
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Preference number: 6 (lower is better) Translates to: SLYSTLKSSIRG*LSTICLDGITG Trigger: ACCTGTAATGCCATCCAGGCAGATTGTAGAAAGGCAGCCTCGAATGCTAGACTTCAGAGTTGAATACAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS GCA 72 bp | TTGTTCTTTGCGAATCTGCTCCAAACGAAACTGTTCTaGCATCTCTCTCTCATGAGCTTCTCTCTTTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: LFFANLLQTKLF*HLSLMSFSLCP Trigger: AGGGCAAAGAGAGAAGCTCATGAGAGAGAGATGGCAGAACAGTTTCGTTTGGAGCAGATTCGCAAAGAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS TCA 72 bp | TCACGTTCATCCTCATCCTTAATGTCTTCCTGTTGTTaGGCTGAGAAAATCTCCATTGCAGCCATGAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: SRSSSSLMSSCC*AEKISIAAMSL Trigger: GAGACTCATGGCTGCAATGGAGATTTTCTCAGCTCAACAACAGGAAGACATTAAGGATGAGGATGAACGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS CAA 72 bp | CGAATAGTTTGTGCAATAACGCTGCCAAAGTGTCTATaGCACATTGTCAGAAATCTTGCTCTGTTGGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: RIVCAITLPKCL*HIVRNLALLVS Trigger: GGACACCAACAGAGCAAGATTTCTGACAATGTGCAATAGACACTTTGGCAGCGTTATTGCACAAACTATTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS CAA 90 bp | TCGCTTTCCCATGATAATCAGGAAAAGTGGAAACTGATCTGTCTTTaGAGTCCGAATAGTTTGTGCAATAACGCTGCCAAAGTGTCTATT | + |
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Preference number: 6 (lower is better) Translates to: SLSHDNQEKWKLICL*SPNSLCNNAAKVSI Trigger: AATAGACACTTTGGCAGCGTTATTGCACAAACTATTCGGACTCAAAAGACAGATCAGTTTCCACTTTTCCTGATTATCATGGGAAAGCGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS GCA 72 bp | ACACCATTAATAGCTGCCACCAAGTCCCAGTTATTTTaGTCAAGCAGTGTAATAGCTTCATCGATGTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: TPLIAATKSQLF*SSSVIASSMFS Trigger: TGAAAACATCGATGAAGCTATTACACTGCTTGAGCAAAATAACTGGGACTTGGTGGCAGCTATTAATGGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS GCA 72 bp | TGGAAACTGATCTGTCTTTTGAGTCCGAATAGTTTGTaGAATAACGCTGCCAAAGTGTCTATTGCACATTGT | + |
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Preference number: 6 (lower is better) Translates to: WKLICLLSPNSL*NNAAKVSIAHC Trigger: ACAATGTGCAATAGACACTTTGGCAGCGTTATTGCACAAACTATTCGGACTCAAAAGACAGATCAGTTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS CAA 72 bp | AAGTGGAAACTGATCTGTCTTTTGAGTCCGAATAGTTaGTGCAATAACGCTGCCAAAGTGTCTATTGCACAT | + |
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Preference number: 6 (lower is better) Translates to: KWKLICLLSPNS*CNNAAKVSIAH Trigger: ATGTGCAATAGACACTTTGGCAGCGTTATTGCACAAACTATTCGGACTCAAAAGACAGATCAGTTTCCACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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| CDS CAA 90 bp | AATCAGGAAAAGTGGAAACTGATCTGTCTTTTGAGTCCGAATAGTTaGTGCAATAACGCTGCCAAAGTGTCTATTGCACATTGTCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: NQEKWKLICLLSPNS*CNNAAKVSIAHCQK Trigger: TTTCTGACAATGTGCAATAGACACTTTGGCAGCGTTATTGCACAAACTATTCGGACTCAAAAGACAGATCAGTTTCCACTTTTCCTGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102724.5 |
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