Pregenerated sensors for FADS6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044788Ensembl transcript IDs: ENSMUST00000056153.8
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCTGGGGACTAGAACCACTGATGGTACAGGAGGAAGCAGCAGCCTaGGCACTGAGGAGAGCCGAGCGGAGGAGGCTGGCTCTGGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: PWGLEPLMVQEEAAA*ALRRAERRRLALAL Trigger: CAGAGCCAGAGCCAGCCTCCTCCGCTCGGCTCTCCTCAGTGCCCAGGCTGCTGCTTCCTCCTGTACCATCAGTGGTTCTAGTCCCCAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR GCA 90 bp | GGGGTGCTGGGAGAAGACAGGAAGGGTTGTCAGGCCAGTGGCGGCTaGATCTGTCTAGGCCACATCAGCCCCCAGAGATGGGTTCTAGCA | + |
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Preference number: 1 (lower is better) Translates to: GVLGEDRKGCQASGG*ICLGHISPQRWVLA Trigger: TGCTAGAACCCATCTCTGGGGGCTGATGTGGCCTAGACAGATGCAGCCGCCACTGGCCTGACAACCCTTCCTGTCTTCTCCCAGCACCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR CCA 90 bp | AGAAGGAGGGGTGCTGGGAGAAGACAGGAAGGGTTGTCAGGCCAGTaGCGGCTGCATCTGTCTAGGCCACATCAGCCCCCAGAGATGGGT | + |
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Preference number: 1 (lower is better) Translates to: RRRGAGRRQEGLSGQ*RLHLSRPHQPPEMG Trigger: ACCCATCTCTGGGGGCTGATGTGGCCTAGACAGATGCAGCCGCCACTGGCCTGACAACCCTTCCTGTCTTCTCCCAGCACCCCTCCTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR CCA 90 bp | ACCCAGCACTTTGGAGGGAGAGGAAGAGCAAAGATTCCCAACCCGTaGGTTGTGACCCTTTGGGGGTCGAGCGACCCTTTCCCAGGGGTC | + |
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Preference number: 1 (lower is better) Translates to: TQHFGGRGRAKIPNP*VVTLWGSSDPFPGV Trigger: GACCCCTGGGAAAGGGTCGCTCGACCCCCAAAGGGTCACAACCCACGGGTTGGGAATCTTTGCTCTTCCTCTCCCTCCAAAGTGCTGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR GCA 90 bp | TCTGTCCCTCCTTCAGTCTCCACTGGGCCCTTCCATAAACCTCTCTaGTCTGCCATCTGGCTGAAGCACTGCCCAGCCTCTCTCGGTTGC | + |
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Preference number: 1 (lower is better) Translates to: SVPPSVSTGPFHKPL*SAIWLKHCPASLGC Trigger: GCAACCGAGAGAGGCTGGGCAGTGCTTCAGCCAGATGGCAGAGCAGAGAGGTTTATGGAAGGGCCCAGTGGAGACTGAAGGAGGGACAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR CCA 90 bp | TGCCATCTGGCTGAAGCACTGCCCAGCCTCTCTCGGTTGCTGGCTTaGCTGGTTCTCAGTGTTGTTCCCCAGCTTGGCTTCCTCCTAGTG | + |
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Preference number: 1 (lower is better) Translates to: CHLAEALPSLSRLLA*LVLSVVPQLGFLLV Trigger: CACTAGGAGGAAGCCAAGCTGGGGAACAACACTGAGAACCAGCCAAGCCAGCAACCGAGAGAGGCTGGGCAGTGCTTCAGCCAGATGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR CCA 90 bp | GAGTCCTGTCATGTCCAGAAATCTGGGCTCTGCTTTGCTGTACCCTaGCCTCTGGCTCTGGCAGGCTTCCTGCTCCCTCTTCCACAGTGG | + |
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Preference number: 1 (lower is better) Translates to: ESCHVQKSGLCFAVP*PLALAGFLLPLPQW Trigger: CCACTGTGGAAGAGGGAGCAGGAAGCCTGCCAGAGCCAGAGGCCAGGGTACAGCAAAGCAGAGCCCAGATTTCTGGACATGACAGGACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR CCA 90 bp | CCTTTCATCTCACTGACTCTGTGGGTCCTAGAGCTGAGCCCAGTGTaGCACAGGCTCCTTCAGGTGAAGAACAGGGGAGGGGGTCTGCTA | + |
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Preference number: 1 (lower is better) Translates to: PFISLTLWVLELSPV*HRLLQVKNRGGGLL Trigger: TAGCAGACCCCCTCCCCTGTTCTTCACCTGAAGGAGCCTGTGCCACACTGGGCTCAGCTCTAGGACCCACAGAGTCAGTGAGATGAAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR GCA 90 bp | ATTAGTGCAGGAGTCCTGTCATGTCCAGAAATCTGGGCTCTGCTTTaGTGTACCCTGGCCTCTGGCTCTGGCAGGCTTCCTGCTCCCTCT | + |
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Preference number: 1 (lower is better) Translates to: ISAGVLSCPEIWALL*CTLASGSGRLPAPS Trigger: AGAGGGAGCAGGAAGCCTGCCAGAGCCAGAGGCCAGGGTACAGCAAAGCAGAGCCCAGATTTCTGGACATGACAGGACTCCTGCACTAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR TCA 90 bp | TCACTGGGGGTGGACTTCAGGCCTAGTGTCACTCTTCCTACTCTCTaGGGATCCAGTAGAACTCTCAGCTCCTCTCCTGCACCATGTCTG | + |
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Preference number: 1 (lower is better) Translates to: SLGVDFRPSVTLPTL*GSSRTLSSSPAPCL Trigger: CAGACATGGTGCAGGAGAGGAGCTGAGAGTTCTACTGGATCCTCAGAGAGTAGGAAGAGTGACACTAGGCCTGAAGTCCACCCCCAGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR CCA 90 bp | GAGCACTTCTCTGGAAATACACTCCCTTTCATCTCACTGACTCTGTaGGTCCTAGAGCTGAGCCCAGTGTGGCACAGGCTCCTTCAGGTG | + |
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Preference number: 1 (lower is better) Translates to: EHFSGNTLPFISLTL*VLELSPVWHRLLQV Trigger: CACCTGAAGGAGCCTGTGCCACACTGGGCTCAGCTCTAGGACCCACAGAGTCAGTGAGATGAAAGGGAGTGTATTTCCAGAGAAGTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR CCA 90 bp | GTGGCACTGTTAGGAGGTGTGACCTTGATGGAGGAAGTGTGTCACTaGGGGTGGACTTCAGGCCTAGTGTCACTCTTCCTACTCTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: VALLGGVTLMEEVCH*GWTSGLVSLFLLSE Trigger: CTCAGAGAGTAGGAAGAGTGACACTAGGCCTGAAGTCCACCCCCAGTGACACACTTCCTCCATCAAGGTCACACCTCCTAACAGTGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR CCA 90 bp | CTGTTAGGAGGTGTGACCTTGATGGAGGAAGTGTGTCACTGGGGGTaGACTTCAGGCCTAGTGTCACTCTTCCTACTCTCTGAGGATCCA | + |
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Preference number: 1 (lower is better) Translates to: LLGGVTLMEEVCHWG*TSGLVSLFLLSEDP Trigger: TGGATCCTCAGAGAGTAGGAAGAGTGACACTAGGCCTGAAGTCCACCCCCAGTGACACACTTCCTCCATCAAGGTCACACCTCCTAACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR CCA 90 bp | CTCTCGGTTGCTGGCTTGGCTGGTTCTCAGTGTTGTTCCCCAGCTTaGCTTCCTCCTAGTGTTGGTATCAGTGGCTCCATTATATTCCCA | + |
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Preference number: 1 (lower is better) Translates to: LSVAGLAGSQCCSPA*LPPSVGISGSIIFP Trigger: TGGGAATATAATGGAGCCACTGATACCAACACTAGGAGGAAGCCAAGCTGGGGAACAACACTGAGAACCAGCCAAGCCAGCAACCGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR TCA 90 bp | ACACCCAAAATGTCTACAGGGCTTCCCATTCCGAAACAGCATCTCTaGGGGTCACCAACCTGGGTTCTGGAGTTGCTGAGTTCAAATCCC | + |
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Preference number: 1 (lower is better) Translates to: TPKMSTGLPIPKQHL*GSPTWVLELLSSNP Trigger: GGGATTTGAACTCAGCAACTCCAGAACCCAGGTTGGTGACCCTCAGAGATGCTGTTTCGGAATGGGAAGCCCTGTAGACATTTTGGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR TCA 90 bp | GTGGTCCCTGAGCCTTGGGGGCATGTTCATCTGGCTGTGACACTTTaGTGGCAGTTGAGAAGTTGTGACAGACATCATATTGTTCACAAC | + |
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Preference number: 1 (lower is better) Translates to: VVPEPWGHVHLAVTL*WQLRSCDRHHIVHN Trigger: GTTGTGAACAATATGATGTCTGTCACAACTTCTCAACTGCCATCAAAGTGTCACAGCCAGATGAACATGCCCCCAAGGCTCAGGGACCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR TCA 90 bp | CACATGGTTAGACTGACAGACAGGGCACATTGCAGAGAACCTAAGTaGTTTGTTCCTGGTGCACCCATGGCCATGGTATGTCTAGTCATA | + |
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Preference number: 1 (lower is better) Translates to: HMVRLTDRAHCREPK*FVPGAPMAMVCLVI Trigger: TATGACTAGACATACCATGGCCATGGGTGCACCAGGAACAAATCACTTAGGTTCTCTGCAATGTGCCCTGTCTGTCAGTCTAACCATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR TCA 90 bp | GCACACCACCATGCTTCCCACCCTGATGGTAATGGACTAAATGTCTaGACTGTAAGCCAGCCCCAATTAAATGTTTTCCTTTGTAAGAGT | + |
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Preference number: 1 (lower is better) Translates to: AHHHASHPDGNGLNV*TVSQPQLNVFLCKS Trigger: ACTCTTACAAAGGAAAACATTTAATTGGGGCTGGCTTACAGTTCAGACATTTAGTCCATTACCATCAGGGTGGGAAGCATGGTGGTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR TCA 90 bp | CCCAGATCAATAGCAGTGAGTCACTGGCTGTATATTTGGATGGTTTaGTCACTAGCTTACAATACACTGCCAGGACCCTTTTCTGTCATT | + |
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Preference number: 1 (lower is better) Translates to: PRSIAVSHWLYIWMV*SLAYNTLPGPFSVI Trigger: AATGACAGAAAAGGGTCCTGGCAGTGTATTGTAAGCTAGTGATCAAACCATCCAAATATACAGCCAGTGACTCACTGCTATTGATCTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR CCA 90 bp | GTTGTGACAGACATCATATTGTTCACAACACCTGAAATATTTATCTaGCCCTTTTCACAAAATTTGACACCCTGCACTGGGCAGCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: VVTDIILFTTPEIFI*PFSQNLTPCTGQQA Trigger: AGCCTGCTGCCCAGTGCAGGGTGTCAAATTTTGTGAAAAGGGCCAGATAAATATTTCAGGTGTTGTGAACAATATGATGTCTGTCACAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR TCA 90 bp | TGGCAGTTGAGAAGTTGTGACAGACATCATATTGTTCACAACACCTaGAATATTTATCTGGCCCTTTTCACAAAATTTGACACCCTGCAC | + |
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Preference number: 1 (lower is better) Translates to: WQLRSCDRHHIVHNT*NIYLALFTKFDTLH Trigger: GTGCAGGGTGTCAAATTTTGTGAAAAGGGCCAGATAAATATTTCAGGTGTTGTGAACAATATGATGTCTGTCACAACTTCTCAACTGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR CAA 90 bp | AAGGGCCCCGGAAGAAGGAGGGGTGCTGGGAGAAGACAGGAAGGGTaGTCAGGCCAGTGGCGGCTGCATCTGTCTAGGCCACATCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: KGPGRRRGAGRRQEG*SGQWRLHLSRPHQP Trigger: GGGCTGATGTGGCCTAGACAGATGCAGCCGCCACTGGCCTGACAACCCTTCCTGTCTTCTCCCAGCACCCCTCCTTCTTCCGGGGCCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGAGGCTGCCCAAGAGCCATAGCTGGAGGAAAGGGCCCCGGAAGAAGGAGGGCCTCTCTCGGTTGCTaGCTTGGCTGGTTCTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: GRGCPRAIAGGKGPGRRRASLGC*LGWFSV Trigger: CACTGAGAACCAGCCAAGCCAGCAACCGAGAGAGGC...CCTCCTTCTTCCGGGGCCCTTTCCTCCAGCTATGGCTCTTGGGCAGCCTCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGAGTCCTGTCATGTCCAGAAATCTGGGCTCTGCTTTGCTGTACCCTGGCCTCAGCAGCCTGGGCACTaGGGAGAGCCGAGCGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: QESCHVQKSGLCFAVPWPQQPGH*GEPSGG Trigger: TCCTCCGCTCGGCTCTCCTCAGTGCCCAGGCTGCTG...AGGCCAGGGTACAGCAAAGCAGAGCCCAGATTTCTGGACATGACAGGACTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR-3UTR TCA 90 bp | AAGATTCCCAACCCGTGGGTTGTGACCCTTTGGGGGTCGAGCGACCCTTTCCCAACAGGCTCCTTCAGGTaGAGAACAGGGGAGGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: KIPNPWVVTLWGSSDPFPTGSFR*RTGEGV Trigger: GACCCCCTCCCCTGTTCTTCACCTGAAGGAGCCTGT...TGGGAAAGGGTCGCTCGACCCCCAAAGGGTCACAACCCACGGGTTGGGAATCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGAGTCCTGTCATGTCCAGAAATCTGGGCTCTGCTTTGCTGTACCCTGGCCTCCAACCCGTGGGTTGTaGCCCTTTGGGGGTCGAGCG | + |
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Preference number: 2 (lower is better) Translates to: QESCHVQKSGLCFAVPWPPTRGL*PFGGRA Trigger: CGCTCGACCCCCAAAGGGTCACAACCCACGGGTTGG...AGGCCAGGGTACAGCAAAGCAGAGCCCAGATTTCTGGACATGACAGGACTCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCATCTGTCTAGGCCACATCAGCCCCCAGAGATGGGTTCTAGCAGGCTGGTCCTAGGGAGAGGGCCCTaGGGACTAGAACCACTGATG | + |
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Preference number: 2 (lower is better) Translates to: LHLSRPHQPPEMGSSRLVLGRGP*GLEPLM Trigger: CATCAGTGGTTCTAGTCCCCAGGGCCCTCTCCCTAG...GACCAGCCTGCTAGAACCCATCTCTGGGGGCTGATGTGGCCTAGACAGATGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGAGGCTGCCCAAGAGCCATAGCTGGAGGAAAGGGCCCCGGAAGAAGGAGGTGTTGTTCCCCAGCTTaGCTTCCTCCTAGTGTTGGT | + |
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Preference number: 2 (lower is better) Translates to: GRGCPRAIAGGKGPGRRRCCSPA*LPPSVG Trigger: ACCAACACTAGGAGGAAGCCAAGCTGGGGAACAACA...CCTCCTTCTTCCGGGGCCCTTTCCTCCAGCTATGGCTCTTGGGCAGCCTCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR-3UTR TCA 90 bp | TACAAACGTCTAGCCTGGCCCAGAGGGAAACCTTTAAACCCAGCACTTTGGAGGGGCTGGCTCTGGCTCTaGGCCCCCTCCTTCTGGACA | + |
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Preference number: 2 (lower is better) Translates to: YKRLAWPRGKPLNPALWRGWLWL*APSFWT Trigger: TGTCCAGAAGGAGGGGGCTCAGAGCCAGAGCCAGCC...CCTCCAAAGTGCTGGGTTTAAAGGTTTCCCTCTGGGCCAGGCTAGACGTTTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGGTGTGACCTTGATGGAGGAAGTGTGTCACTGGGGGTGGACTTCAGGCCTAATCTGGCTGAAGCACTaGCCAGCCTCTCTCGGTTGC | + |
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Preference number: 2 (lower is better) Translates to: GGVTLMEEVCHWGWTSGLIWLKH*PASLGC Trigger: GCAACCGAGAGAGGCTGGGCAGTGCTTCAGCCAGAT...TAGGCCTGAAGTCCACCCCCAGTGACACACTTCCTCCATCAAGGTCACACCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR CAA 90 bp | GTTCCCATAGGCTTATGGGGCGTGGCACTGTTAGGAGGTGTGACCTaGATGGAGGAAGTGTGTCACTGGGGGTGGACTTCAGGCCTAGTG | + |
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Preference number: 2 (lower is better) Translates to: VPIGLWGVALLGGVT*MEEVCHWGWTSGLV Trigger: CACTAGGCCTGAAGTCCACCCCCAGTGACACACTTCCTCCATCAAGGTCACACCTCCTAACAGTGCCACGCCCCATAAGCCTATGGGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGGTGTGACCTTGATGGAGGAAGTGTGTCACTGGGGGTGGACTTCAGGCCTACCGAAACAGCATCTCTaGGGGTCACCAACCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: GGVTLMEEVCHWGWTSGLPKQHL*GSPTWV Trigger: AACCCAGGTTGGTGACCCTCAGAGATGCTGTTTCGG...TAGGCCTGAAGTCCACCCCCAGTGACACACTTCCTCCATCAAGGTCACACCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR-3UTR GCA 90 bp | AAGATTCCCAACCCGTGGGTTGTGACCCTTTGGGGGTCGAGCGACCCTTTCCCAAAGCAAGTGGATTTCTaGGAGTTTGAGGCCAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: KIPNPWVVTLWGSSDPFPKQVDF*EFEASH Trigger: GTGGCTGGCCTCAAACTCGCAGAAATCCACTTGCTT...TGGGAAAGGGTCGCTCGACCCCCAAAGGGTCACAACCCACGGGTTGGGAATCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTCGGTTGCTGGCTTGGCTGGTTCTCAGTGTTGTTCCCCAGCTTGGCTTCATCTCACTGACTCTGTaGGTCCTAGAGCTGAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: LSRLLAWLVLSVVPQLGFISLTL*VLELSP Trigger: TGGGCTCAGCTCTAGGACCCACAGAGTCAGTGAGAT...GAAGCCAAGCTGGGGAACAACACTGAGAACCAGCCAAGCCAGCAACCGAGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGCATCTCTGAGGGTCACCAACCTGGGTTCTGGAGTTGCTGAGTTCAAATCCCCAGCCTCTCTCGGTTaGTGGCTTGGCTGGTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: TASLRVTNLGSGVAEFKSPASLG*WLGWFS Trigger: TGAGAACCAGCCAAGCCAGCAACCGAGAGAGGCTGG...GGATTTGAACTCAGCAACTCCAGAACCCAGGTTGGTGACCCTCAGAGATGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR CAA 90 bp | CCTCCTAGTGTTGGTATCAGTGGCTCCATTATATTCCCACCCAGCTaGCAATCCTTCCTCCCAGAGCCAAACCGAGCCCTTCTCTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: PPSVGISGSIIFPPS*QSFLPEPNRALLFS Trigger: GCTGAAGAGAAGGGCTCGGTTTGGCTCTGGGAGGAAGGATTGCAAGCTGGGTGGGAATATAATGGAGCCACTGATACCAACACTAGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGATATAGAGGCCATCTCATTCACTCATCCCCAGAGCATCACACAGTACCTAGAGCTGAGCCCAGTGTaGCACAGGCTCCTTCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: WDIEAISFTHPQSITQYLELSPV*HRLLQV Trigger: CACCTGAAGGAGCCTGTGCCACACTGGGCTCAGCTC...TAGGTACTGTGTGATGCTCTGGGGATGAGTGAATGAGATGGCCTCTATATCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCAGGAGTCCTGTCATGTCCAGAAATCTGGGCTCTGCTTTGCTGTACCCTGGGCGCATGCTCCCTTCTaGAGCACTTCTCTGGAAATA | + |
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Preference number: 2 (lower is better) Translates to: VQESCHVQKSGLCFAVPWAHAPF*STSLEI Trigger: TATTTCCAGAGAAGTGCTCCAGAAGGGAGCATGCGC...CCAGGGTACAGCAAAGCAGAGCCCAGATTTCTGGACATGACAGGACTCCTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTCGGTTGCTGGCTTGGCTGGTTCTCAGTGTTGTTCCCCAGCTTGGCTTCGGAGCCTTCCGAACATaGAACAAAGCAGAGTTGTAC | + |
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Preference number: 2 (lower is better) Translates to: LSRLLAWLVLSVVPQLGFGAFRT*NKAELY Trigger: GTACAACTCTGCTTTGTTCCATGTTCGGAAGGCTCC...GAAGCCAAGCTGGGGAACAACACTGAGAACCAGCCAAGCCAGCAACCGAGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR-3UTR CCA 90 bp | TACAAACGTCTAGCCTGGCCCAGAGGGAAACCTTTAAACCCAGCACTTTGGAGGGGTTGCTGGCTTGGCTaGTTCTCAGTGTTGTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: YKRLAWPRGKPLNPALWRGCWLG*FSVLFP Trigger: GGGGAACAACACTGAGAACCAGCCAAGCCAGCAACC...CCTCCAAAGTGCTGGGTTTAAAGGTTTCCCTCTGGGCCAGGCTAGACGTTTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR-3UTR CCA 90 bp | AGCATAGCAAAGTACAGGCATGAACCATTAGGAAGGCTGAGATCCACTGAGGTGCTCTGCTCTGCCATCTaGCTGAAGCACTGCCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: SIAKYRHEPLGRLRSTEVLCSAI*LKHCPA Trigger: GGCTGGGCAGTGCTTCAGCCAGATGGCAGAGCAGAG...CACCTCAGTGGATCTCAGCCTTCCTAATGGTTCATGCCTGTACTTTGCTATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR CAA 90 bp | CTAGCTGAGACGCCCCTCTATTCTGTAACCATCACTGGCTTGATCTaGTGTGGGCAGCCACTGGCTGCTGTGAGTTTATTAGTGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LAETPLYSVTITGLI*CGQPLAAVSLLVQE Trigger: CTCCTGCACTAATAAACTCACAGCAGCCAGTGGCTGCCCACACAAGATCAAGCCAGTGATGGTTACAGAATAGAGGGGCGTCTCAGCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTTCATCTCACTGACTCTGTGGGTCCTAGAGCTGAGCCCAGTGTGGCACAGGAGGATGCACAGCCTCTaGACTGATTCCATTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: PFISLTLWVLELSPVWHRRMHSL*TDSISS Trigger: AGAAGAAATGGAATCAGTTCAGAGGCTGTGCATCCT...CCTGTGCCACACTGGGCTCAGCTCTAGGACCCACAGAGTCAGTGAGATGAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR-3UTR GCA 90 bp | GTGCAGGAGTCCTGTCATGTCCAGAAATCTGGGCTCTGCTTTGCTGTACCCTGGCTAGGTGGATCAGGATaGACAGCCTCTGAACTGATT | + |
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Preference number: 2 (lower is better) Translates to: VQESCHVQKSGLCFAVPWLGGSG*TASELI Trigger: AATCAGTTCAGAGGCTGTGCATCCTGATCCACCTAG...CCAGGGTACAGCAAAGCAGAGCCCAGATTTCTGGACATGACAGGACTCCTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR-3UTR GCA 90 bp | TACAAACGTCTAGCCTGGCCCAGAGGGAAACCTTTAAACCCAGCACTTTGGAGGGCGCTCAGCACAGCCTaGCACAAATCAGCCAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: YKRLAWPRGKPLNPALWRALSTA*HKSAKE Trigger: TTCTTTGGCTGATTTGTGGCAGGCTGTGCTGAGCGC...CCTCCAAAGTGCTGGGTTTAAAGGTTTCCCTCTGGGCCAGGCTAGACGTTTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR CAA 90 bp | TGGCTGGTTCTCAGTGTTGTTCCCCAGCTTGGCTTCCTCCTAGTGTaGGTATCAGTGGCTCCATTATATTCCCACCCAGCTTGCAATCCT | + |
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Preference number: 2 (lower is better) Translates to: WLVLSVVPQLGFLLV*VSVAPLYSHPACNP Trigger: AGGATTGCAAGCTGGGTGGGAATATAATGGAGCCACTGATACCAACACTAGGAGGAAGCCAAGCTGGGGAACAACACTGAGAACCAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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| 3UTR CAA 90 bp | GGAAGCAAGTGGATTTCTGCGAGTTTGAGGCCAGCCACCCACCAATaGAGTTCCAGAAAACAACACAACCAGAGCCAAGCAAGTCTGCGT | + |
|
Preference number: 2 (lower is better) Translates to: GSKWISASLRPATHQ*SSRKQHNQSQASLR Trigger: ACGCAGACTTGCTTGGCTCTGGTTGTGTTGTTTTCTGGAACTCAATTGGTGGGTGGCTGGCCTCAAACTCGCAGAAATCCACTTGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGCATCTCTGAGGGTCACCAACCTGGGTTCTGGAGTTGCTGAGTTCAAATCCCTCACATGGTTAGACTaGCAGACAGGGCACATTGCA | + |
|
Preference number: 2 (lower is better) Translates to: TASLRVTNLGSGVAEFKSLTWLD*QTGHIA Trigger: TGCAATGTGCCCTGTCTGTCAGTCTAACCATGTGAG...GGATTTGAACTCAGCAACTCCAGAACCCAGGTTGGTGACCCTCAGAGATGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR-3UTR TCA 90 bp | TACAAACGTCTAGCCTGGCCCAGAGGGAAACCTTTAAACCCAGCACTTTGGAGGAAGGCTGAGATCCACTaGGGTGGAAGCAAGTGGATT | + |
|
Preference number: 2 (lower is better) Translates to: YKRLAWPRGKPLNPALWRKAEIH*GGSKWI Trigger: AATCCACTTGCTTCCACCTCAGTGGATCTCAGCCTT...CCTCCAAAGTGCTGGGTTTAAAGGTTTCCCTCTGGGCCAGGCTAGACGTTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGAGTCCTGTCATGTCCAGAAATCTGGGCTCTGCTTTGCTGTACCCTGGCCTCACTTTGATGGCAGTTaGGAAGTTGTGACAGACATC | + |
|
Preference number: 2 (lower is better) Translates to: QESCHVQKSGLCFAVPWPHFDGS*EVVTDI Trigger: GATGTCTGTCACAACTTCTCAACTGCCATCAAAGTG...AGGCCAGGGTACAGCAAAGCAGAGCCCAGATTTCTGGACATGACAGGACTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGTGTGACCTTGATGGAGGAAGTGTGTCACTGGGGGTGGACTTCAGGCCTAATAGCAGTGAGTCACTaGCTGTATATTTGGATGGTT | + |
|
Preference number: 2 (lower is better) Translates to: GGVTLMEEVCHWGWTSGLIAVSH*LYIWMV Trigger: AACCATCCAAATATACAGCCAGTGACTCACTGCTAT...TAGGCCTGAAGTCCACCCCCAGTGACACACTTCCTCCATCAAGGTCACACCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CAA 90 bp | CCCACTCAGGCCCAGATCAATAGCAGTGAGTCACTGGCTGTATATTaGGATGGTTTGATCACTAGCTTACAATACACTGCCAGGACCCTT | + |
|
Preference number: 2 (lower is better) Translates to: PTQAQINSSESLAVY*DGLITSLQYTARTL Trigger: AAGGGTCCTGGCAGTGTATTGTAAGCTAGTGATCAAACCATCCAAATATACAGCCAGTGACTCACTGCTATTGATCTGGGCCTGAGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTCACAACACCTGAAATATTTATCTGGCCCTTTTCACAAAATTTGACACCCGAGGAAGCAGCAGCCTaGGCACTGAGGAGAGCCGAG | + |
|
Preference number: 2 (lower is better) Translates to: LFTTPEIFIWPFSQNLTPEEAAA*ALRRAE Trigger: CTCGGCTCTCCTCAGTGCCCAGGCTGCTGCTTCCTC...GGGTGTCAAATTTTGTGAAAAGGGCCAGATAAATATTTCAGGTGTTGTGAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CAA 90 bp | GCCCAGATCAATAGCAGTGAGTCACTGGCTGTATATTTGGATGGTTaGATCACTAGCTTACAATACACTGCCAGGACCCTTTTCTGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: AQINSSESLAVYLDG*ITSLQYTARTLFCH Trigger: ATGACAGAAAAGGGTCCTGGCAGTGTATTGTAAGCTAGTGATCAAACCATCCAAATATACAGCCAGTGACTCACTGCTATTGATCTGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTCACAACACCTGAAATATTTATCTGGCCCTTTTCACAAAATTTGACACCCGACAGTTTCGTCACTTaGGAGACAGTTGGCTATCCC | + |
|
Preference number: 2 (lower is better) Translates to: LFTTPEIFIWPFSQNLTPDSFVT*ETVGYP Trigger: GGGATAGCCAACTGTCTCCCAAGTGACGAAACTGTC...GGGTGTCAAATTTTGTGAAAAGGGCCAGATAAATATTTCAGGTGTTGTGAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGTTCACAACACCTGAAATATTTATCTGGCCCTTTTCACAAAATTTGACACCCTTCCATAAACCTCTCTaGTCTGCCATCTGGCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LFTTPEIFIWPFSQNLTPFHKPL*SAIWLK Trigger: CTTCAGCCAGATGGCAGAGCAGAGAGGTTTATGGAA...GGGTGTCAAATTTTGTGAAAAGGGCCAGATAAATATTTCAGGTGTTGTGAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CCA 72 bp | GGCCACATCAGCCCCCAGAGATGGGTTCTAGCAGGCTaGTCGGCCCATCCCCGTGTACCCTCCCATCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: GHISPQRWVLAG*SAHPRVPSHHQ Trigger: CTGGTGATGGGAGGGTACACGGGGATGGGCCGACCAGCCTGCTAGAACCCATCTCTGGGGGCTGATGTGGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR GCA 72 bp | TCCCAACAGTCTCCCTTAACTCAAATCCCAGGACGGTaGCAGGTCCACCAGTCCGCACCCCCTCCCCAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SQQSPLTQIPGR*QVHQSAPPPQG Trigger: CCCTTGGGGAGGGGGTGCGGACTGGTGGACCTGGCACCGTCCTGGGATTTGAGTTAAGGGAGACTGTTGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CCA 72 bp | CTAGAACCACTGATGGTACAGGAGGAAGCAGCAGCCTaGGCACTGAGGAGAGCCGAGCGGAGGAGGCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LEPLMVQEEAAA*ALRRAERRRLA Trigger: AGCCAGCCTCCTCCGCTCGGCTCTCCTCAGTGCCCAGGCTGCTGCTTCCTCCTGTACCATCAGTGGTTCTAG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CCA 72 bp | GGTGCTGGGAGAAGACAGGAAGGGTTGTCAGGCCAGTaGCGGCTGCATCTGTCTAGGCCACATCAGCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GAGRRQEGLSGQ*RLHLSRPHQPP Trigger: TGGGGGCTGATGTGGCCTAGACAGATGCAGCCGCCACTGGCCTGACAACCCTTCCTGTCTTCTCCCAGCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR TCA 72 bp | GGTCTGATACCAGGGCCTCCAGCGGCTGCCCCGGAATaGACCCCACTCAGGCCCAGATCAATAGCAGTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: GLIPGPPAAAPE*TPLRPRSIAVS Trigger: ACTCACTGCTATTGATCTGGGCCTGAGTGGGGTTCATTCCGGGGCAGCCGCTGGAGGCCCTGGTATCAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR TCA 72 bp | GGAGAGGAAGAGCAAAGATTCCCAACCCGTGGGTTGTaGCCCTTTGGGGGTCGAGCGACCCTTTCCCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: GEEEQRFPTRGL*PFGGRATLSQG Trigger: CCCCTGGGAAAGGGTCGCTCGACCCCCAAAGGGTCACAACCCACGGGTTGGGAATCTTTGCTCTTCCTCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR GCA 72 bp | GCCATCTGGCTGAAGCACTGCCCAGCCTCTCTCGGTTaGTGGCTTGGCTGGTTCTCAGTGTTGTTCCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: AIWLKHCPASLG*WLGWFSVLFPS Trigger: GCTGGGGAACAACACTGAGAACCAGCCAAGCCAGCAACCGAGAGAGGCTGGGCAGTGCTTCAGCCAGATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR GCA 72 bp | TGTCTAGTCAGGTCTGATACCAGGGCCTCCAGCGGCTaGCCCGGAATGAACCCCACTCAGGCCCAGATCAAT | + |
|
Preference number: 3 (lower is better) Translates to: CLVRSDTRASSG*PGMNPTQAQIN Trigger: ATTGATCTGGGCCTGAGTGGGGTTCATTCCGGGGCAGCCGCTGGAGGCCCTGGTATCAGACCTGACTAGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CCA 72 bp | TCACTGACTCTGTGGGTCCTAGAGCTGAGCCCAGTGTaGCACAGGCTCCTTCAGGTGAAGAACAGGGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SLTLWVLELSPV*HRLLQVKNRGG Trigger: CCCTCCCCTGTTCTTCACCTGAAGGAGCCTGTGCCACACTGGGCTCAGCTCTAGGACCCACAGAGTCAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR TCA 72 bp | AAAATGTCAGCAGCGGGGAGGCGAGGAGCTAGGTTATaGCCTAACAGCGGCCCTGGCGTCCTGATGCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: KMSAAGRRGARL*PNSGPGVLMHA Trigger: TGCATGCATCAGGACGCCAGGGCCGCTGTTAGGTCATAACCTAGCTCCTCGCCTCCCCGCTGCTGACATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR GCA 72 bp | CATAAACCTCTCTGCTCTGCCATCTGGCTGAAGCACTaGCCAGCCTCTCTCGGTTGCTGGCTTGGCTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: HKPLCSAIWLKH*PASLGCWLGWF Trigger: GAACCAGCCAAGCCAGCAACCGAGAGAGGCTGGGCAGTGCTTCAGCCAGATGGCAGAGCAGAGAGGTTTATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR GCA 72 bp | CCTTCAGTCTCCACTGGGCCCTTCCATAAACCTCTCTaGTCTGCCATCTGGCTGAAGCACTGCCCAGCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PSVSTGPFHKPL*SAIWLKHCPAS Trigger: AGAGGCTGGGCAGTGCTTCAGCCAGATGGCAGAGCAGAGAGGTTTATGGAAGGGCCCAGTGGAGACTGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CCA 72 bp | ACCCCGTTCACCCTGTTTACCCTAGGGAGAGGGCCCTaGGGACTAGAACCACTGATGGTACAGGAGGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TPFTLFTLGRGP*GLEPLMVQEEA Trigger: TGCTTCCTCCTGTACCATCAGTGGTTCTAGTCCCCAGGGCCCTCTCCCTAGGGTAAACAGGGTGAACGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CCA 72 bp | ATCTGGCTGAAGCACTGCCCAGCCTCTCTCGGTTGCTaGCTTGGCTGGTTCTCAGTGTTGTTCCCCAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: IWLKHCPASLGC*LGWFSVLFPSL Trigger: CAAGCTGGGGAACAACACTGAGAACCAGCCAAGCCAGCAACCGAGAGAGGCTGGGCAGTGCTTCAGCCAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CCA 72 bp | ACTGCAGAGCCCTGGTGGTACTTCAGGCACCCCCGCTaGCTCCCTTACTTCTGTATCCCTAGCTCACATGGT | + |
|
Preference number: 3 (lower is better) Translates to: TAEPWWYFRHPR*LPYFCIPSSHG Trigger: ACCATGTGAGCTAGGGATACAGAAGTAAGGGAGCCAGCGGGGGTGCCTGAAGTACCACCAGGGCTCTGCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CCA 72 bp | TTTGGAGGGAGAGGAAGAGCAAAGATTCCCAACCCGTaGGTTGTGACCCTTTGGGGGTCGAGCGACCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: FGGRGRAKIPNP*VVTLWGSSDPF Trigger: GAAAGGGTCGCTCGACCCCCAAAGGGTCACAACCCACGGGTTGGGAATCTTTGCTCTTCCTCTCCCTCCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR-3UTR CAA 90 bp | CGGCTGCATCTGTCTAGGCCACATCAGCCCCCAGAGATGGGTTCTAGCAGGCTGTCCCGGGAGTCATTTTaGACTGTCATGATTTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RLHLSRPHQPPEMGSSRLSRESF*TVMIWA Trigger: AGCCCAAATCATGACAGTCAAAAATGACTCCCGGGA...CAGCCTGCTAGAACCCATCTCTGGGGGCTGATGTGGCCTAGACAGATGCAGCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CCA 72 bp | TCTGGAAATACACTCCCTTTCATCTCACTGACTCTGTaGGTCCTAGAGCTGAGCCCAGTGTGGCACAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SGNTLPFISLTL*VLELSPVWHRL Trigger: GAGCCTGTGCCACACTGGGCTCAGCTCTAGGACCCACAGAGTCAGTGAGATGAAAGGGAGTGTATTTCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CCA 72 bp | GCTGGCTTGGCTGGTTCTCAGTGTTGTTCCCCAGCTTaGCTTCCTCCTAGTGTTGGTATCAGTGGCTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: AGLAGSQCCSPA*LPPSVGISGSI Trigger: AATGGAGCCACTGATACCAACACTAGGAGGAAGCCAAGCTGGGGAACAACACTGAGAACCAGCCAAGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CCA 72 bp | GGTGTGACCTTGATGGAGGAAGTGTGTCACTGGGGGTaGACTTCAGGCCTAGTGTCACTCTTCCTACTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GVTLMEEVCHWG*TSGLVSLFLLS Trigger: AGAGAGTAGGAAGAGTGACACTAGGCCTGAAGTCCACCCCCAGTGACACACTTCCTCCATCAAGGTCACACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR TCA 72 bp | ATGTCTACAGGGCTTCCCATTCCGAAACAGCATCTCTaGGGGTCACCAACCTGGGTTCTGGAGTTGCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: MSTGLPIPKQHL*GSPTWVLELLS Trigger: ACTCAGCAACTCCAGAACCCAGGTTGGTGACCCTCAGAGATGCTGTTTCGGAATGGGAAGCCCTGTAGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CCA 72 bp | GAGTTGTACAGAGCTAGCCAAGGTCATGCTCAAAGCTaGCAGTGCCTTCTACAGTTTTACGCCTGCGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: ELYRASQGHAQS*QCLLQFYACAC Trigger: GCATGCGCAGGCGTAAAACTGTAGAAGGCACTGCCAGCTTTGAGCATGACCTTGGCTAGCTCTGTACAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAGTCCTGTCATGTCCAGAAATCTGGGCTCTGCTTTGCTGTACCCTGGCCTTGGAACAAAGCAGAGTaGTACAGAGCTAGCCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: QESCHVQKSGLCFAVPWPWNKAE*YRASQG Trigger: ACCTTGGCTAGCTCTGTACAACTCTGCTTTGTTCCA...AGGCCAGGGTACAGCAAAGCAGAGCCCAGATTTCTGGACATGACAGGACTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR GCA 72 bp | CATCACTGGCTTGATCTTGTGTGGGCAGCCACTGGCTaGTGTGAGTTTATTAGTGCAGGAGTCCTGTCATGT | + |
|
Preference number: 3 (lower is better) Translates to: HHWLDLVWAATG*CEFISAGVLSC Trigger: ACATGACAGGACTCCTGCACTAATAAACTCACAGCAGCCAGTGGCTGCCCACACAAGATCAAGCCAGTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CCA 72 bp | TTTATTAGTGCAGGAGTCCTGTCATGTCCAGAAATCTaGGCTCTGCTTTGCTGTACCCTGGCCTCTGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FISAGVLSCPEI*ALLCCTLASGS Trigger: AGAGCCAGAGGCCAGGGTACAGCAAAGCAGAGCCCAGATTTCTGGACATGACAGGACTCCTGCACTAATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CCA 72 bp | GCCTTCTACAGTTTTACGCCTGCGCATGCTCCCTTCTaGAGCACTTCTCTGGAAATACACTCCCTTTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: AFYSFTPAHAPF*STSLEIHSLSS Trigger: AGATGAAAGGGAGTGTATTTCCAGAGAAGTGCTCCAGAAGGGAGCATGCGCAGGCGTAAAACTGTAGAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR TCA 72 bp | CAAAATTTGACACCCTGCACTGGGCAGCAGGCTTCATaGATGTGGTGGGATATAGAGGCCATCTCATTCACT | + |
|
Preference number: 3 (lower is better) Translates to: QNLTPCTGQQAS*MWWDIEAISFT Trigger: AGTGAATGAGATGGCCTCTATATCCCACCACATTCATGAAGCCTGCTGCCCAGTGCAGGGTGTCAAATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CCA 72 bp | CCTCTATTCTGTAACCATCACTGGCTTGATCTTGTGTaGGCAGCCACTGGCTGCTGTGAGTTTATTAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PLFCNHHWLDLV*AATGCCEFISA Trigger: TGCACTAATAAACTCACAGCAGCCAGTGGCTGCCCACACAAGATCAAGCCAGTGATGGTTACAGAATAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR TCA 72 bp | ATAGCAGTGAGTCACTGGCTGTATATTTGGATGGTTTaGTCACTAGCTTACAATACACTGCCAGGACCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: IAVSHWLYIWMV*SLAYNTLPGPF Trigger: AAAGGGTCCTGGCAGTGTATTGTAAGCTAGTGATCAAACCATCCAAATATACAGCCAGTGACTCACTGCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR TCA 72 bp | AGAAGTTGTGACAGACATCATATTGTTCACAACACCTaGAATATTTATCTGGCCCTTTTCACAAAATTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: RSCDRHHIVHNT*NIYLALFTKFD Trigger: GTCAAATTTTGTGAAAAGGGCCAGATAAATATTTCAGGTGTTGTGAACAATATGATGTCTGTCACAACTTCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS-3UTR TCA 90 bp | CTGCATCTGTCTAGGCCACATCAGCCCCCAGAGATGGGTTCTAGCAGGCTGGTCGCAAGGCGAGCAGGCTaGGAGCGAGGATGGCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LHLSRPHQPPEMGSSRLVARRAG*ERGWRS Trigger: ACTGCGCCATCCTCGCTCTCAGCCTGCTCGCCTTGC...GACCAGCCTGCTAGAACCCATCTCTGGGGGCTGATGTGGCCTAGACAGATGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS-3UTR GCA 90 bp | CGGCTGCATCTGTCTAGGCCACATCAGCCCCCAGAGATGGGTTCTAGCAGGCTGGCCCAAAGTCCGCAGTaGAGTCCTCGGCTCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLHLSRPHQPPEMGSSRLAQSPQ*SPRLFL Trigger: AAGGAAGAGCCGAGGACTGCACTGCGGACTTTGGGC...CAGCCTGCTAGAACCCATCTCTGGGGGCTGATGTGGCCTAGACAGATGCAGCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS-3UTR CCA 90 bp | CTGCATCTGTCTAGGCCACATCAGCCCCCAGAGATGGGTTCTAGCAGGCTGGTCAGCCAAGGGAAGAGGTaGTGCTCCACGTGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHLSRPHQPPEMGSSRLVSQGKR*CSTWQL Trigger: CAGCTGCCACGTGGAGCACCACCTCTTCCCTTGGCT...GACCAGCCTGCTAGAACCCATCTCTGGGGGCTGATGTGGCCTAGACAGATGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CAA 72 bp | TGCCATCTGGCTGAAGCACTGCCCAGCCTCTCTCGGTaGCTGGCTTGGCTGGTTCTCAGTGTTGTTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CHLAEALPSLSR*LAWLVLSVVPQ Trigger: CTGGGGAACAACACTGAGAACCAGCCAAGCCAGCAACCGAGAGAGGCTGGGCAGTGCTTCAGCCAGATGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS-3UTR TCA 90 bp | CTGCATCTGTCTAGGCCACATCAGCCCCCAGAGATGGGTTCTAGCAGGCTGGTCAAAGGCCCAGGCAGATaGAGCCCAAAGTCCGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LHLSRPHQPPEMGSSRLVKGPGR*SPKSAV Trigger: CACTGCGGACTTTGGGCTTCATCTGCCTGGGCCTTT...GACCAGCCTGCTAGAACCCATCTCTGGGGGCTGATGTGGCCTAGACAGATGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCATCTCTGAGGGTCACCAACCTGGGTTCTGGAGTTGCTGAGTTCAAATCCGCGCAGTCCACACCGTaGCGCTCCCACCACGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TASLRVTNLGSGVAEFKSAQSTP*RSHHEL Trigger: GAGCTCGTGGTGGGAGCGCCACGGTGTGGACTGCGC...GGATTTGAACTCAGCAACTCCAGAACCCAGGTTGGTGACCCTCAGAGATGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCTCGGTTGCTGGCTTGGCTGGTTCTCAGTGTTGTTCCCCAGCTTGGCTTCACTCCTCATAGCGGCTaGGGAACAGCTGGAATCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSRLLAWLVLSVVPQLGFTPHSG*GTAGIE Trigger: CTCGATTCCAGCTGTTCCTCAGCCGCTATGAGGAGT...GAAGCCAAGCTGGGGAACAACACTGAGAACCAGCCAAGCCAGCAACCGAGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CAA 72 bp | GGCTTATGGGGCGTGGCACTGTTAGGAGGTGTGACCTaGATGGAGGAAGTGTGTCACTGGGGGTGGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLWGVALLGGVT*MEEVCHWGWTS Trigger: TGAAGTCCACCCCCAGTGACACACTTCCTCCATCAAGGTCACACCTCCTAACAGTGCCACGCCCCATAAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCGGTTGCTGGCTTGGCTGGTTCTCAGTGTTGTTCCCCAGCTTGGCTTCCCAGACCCACCACGTTaGTGTAAACGTGGTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSRLLAWLVLSVVPQLGFPDPPR*CKRGAD Trigger: ATCTGCACCACGTTTACACCAACGTGGTGGGTCTGG...GAAGCCAAGCTGGGGAACAACACTGAGAACCAGCCAAGCCAGCAACCGAGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS-3UTR CCA 90 bp | GTGCAGGAGTCCTGTCATGTCCAGAAATCTGGGCTCTGCTTTGCTGTACCCTGGCCCAGGGTCATCATGTaGATCCTCCTGGGCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VQESCHVQKSGLCFAVPWPRVIM*ILLGFL Trigger: CAAGAAGCCCAGGAGGATCCACATGATGACCCTGGG...CCAGGGTACAGCAAAGCAGAGCCCAGATTTCTGGACATGACAGGACTCCTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CAA 72 bp | GCTGAGACGCCCCTCTATTCTGTAACCATCACTGGCTaGATCTTGTGTGGGCAGCCACTGGCTGCTGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AETPLYSVTITG*ILCGQPLAAVS Trigger: ACTCACAGCAGCCAGTGGCTGCCCACACAAGATCAAGCCAGTGATGGTTACAGAATAGAGGGGCGTCTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS-3UTR TCA 90 bp | TACAAACGTCTAGCCTGGCCCAGAGGGAAACCTTTAAACCCAGCACTTTGGAGGCATGCAGGCCAGTGCTaGACTGGGGTTCTTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YKRLAWPRGKPLNPALWRHAGQC*TGVLEA Trigger: GGCTTCAAGAACCCCAGTTCAGCACTGGCCTGCATG...CCTCCAAAGTGCTGGGTTTAAAGGTTTCCCTCTGGGCCAGGCTAGACGTTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS-3UTR CCA 90 bp | TACACTCCCTTTCATCTCACTGACTCTGTGGGTCCTAGAGCTGAGCCCAGTGTGTCATGTGGATCCTCCTaGGCTTCTTGTCCGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YTPFHLTDSVGPRAEPSVSCGSS*ASCPGR Trigger: TCTCCCCGGACAAGAAGCCCAGGAGGATCCACATGA...CACACTGGGCTCAGCTCTAGGACCCACAGAGTCAGTGAGATGAAAGGGAGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CAA 72 bp | AGCCTGGCCCAGAGGGAAACCTTTAAACCCAGCACTTaGGAGGGAGAGGAAGAGCAAAGATTCCCAACCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SLAQRETFKPST*EGEEEQRFPTR Trigger: ACGGGTTGGGAATCTTTGCTCTTCCTCTCCCTCCAAAGTGCTGGGTTTAAAGGTTTCCCTCTGGGCCAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGAAATACACTCCCTTTCATCTCACTGACTCTGTGGGTCCTAGAGCTGAGCAGCGTTTGGACTCTGTaGGGGCACTGTGAGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGNTLPFISLTLWVLELSSVWTL*GHCEWP Trigger: TGGCCACTCACAGTGCCCTCACAGAGTCCAAACGCT...GCTCAGCTCTAGGACCCACAGAGTCAGTGAGATGAAAGGGAGTGTATTTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS-3UTR TCA 90 bp | GTGCAGGAGTCCTGTCATGTCCAGAAATCTGGGCTCTGCTTTGCTGTACCCTGGGGGGTTCTTGAAGCCTaGCACATTCATGAACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VQESCHVQKSGLCFAVPWGVLEA*HIHEQP Trigger: TGGCTGTTCATGAATGTGTCAGGCTTCAAGAACCCC...CCAGGGTACAGCAAAGCAGAGCCCAGATTTCTGGACATGACAGGACTCCTGCAC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS-3UTR CCA 90 bp | GTGCAGGAGTCCTGTCATGTCCAGAAATCTGGGCTCTGCTTTGCTGTACCCTGGACCTTCAAGCACATGTaGTCAGAGAGCCAAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VQESCHVQKSGLCFAVPWTFKHM*SESQGK Trigger: CTTCCCTTGGCTCTCTGACCACATGTGCTTGAAGGT...CCAGGGTACAGCAAAGCAGAGCCCAGATTTCTGGACATGACAGGACTCCTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCATCTCTGAGGGTCACCAACCTGGGTTCTGGAGTTGCTGAGTTCAAATCCCGGCTGAGGAACAGCTaGAATCGAGCCAGGTATGAG | + |
|
Preference number: 4 (lower is better) Translates to: TASLRVTNLGSGVAEFKSRLRNS*NRARYE Trigger: CTCATACCTGGCTCGATTCCAGCTGTTCCTCAGCCG...GGATTTGAACTCAGCAACTCCAGAACCCAGGTTGGTGACCCTCAGAGATGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CAA 72 bp | GTTGGTATCAGTGGCTCCATTATATTCCCACCCAGCTaGCAATCCTTCCTCCCAGAGCCAAACCGAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VGISGSIIFPPS*QSFLPEPNRAL Trigger: AAGGGCTCGGTTTGGCTCTGGGAGGAAGGATTGCAAGCTGGGTGGGAATATAATGGAGCCACTGATACCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS-3UTR TCA 90 bp | TGGGATATAGAGGCCATCTCATTCACTCATCCCCAGAGCATCACACAGTACCTAACCACATCCTGCACCTaGCGCTCCAGCTCTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WDIEAISFTHPQSITQYLTTSCT*RSSSFS Trigger: GCTGAAAGAGCTGGAGCGTCAGGTGCAGGATGTGGT...TAGGTACTGTGTGATGCTCTGGGGATGAGTGAATGAGATGGCCTCTATATCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAGTCCTGTCATGTCCAGAAATCTGGGCTCTGCTTTGCTGTACCCTGGCCTTGGTGCAGATTCACGTaGTTGAATTTGGCGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QESCHVQKSGLCFAVPWPWCRFT*LNLANS Trigger: AGAGTTCGCCAAATTCAACCACGTGAATCTGCACCA...AGGCCAGGGTACAGCAAAGCAGAGCCCAGATTTCTGGACATGACAGGACTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CAA 72 bp | CAGGTTGGAGCCTTCCGAACATGGAACAAAGCAGAGTaGTACAGAGCTAGCCAAGGTCATGCTCAAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QVGAFRTWNKAE*YRASQGHAQSW Trigger: CCAGCTTTGAGCATGACCTTGGCTAGCTCTGTACAACTCTGCTTTGTTCCATGTTCGGAAGGCTCCAACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CAA 72 bp | TGGATTTCTGCGAGTTTGAGGCCAGCCACCCACCAATaGAGTTCCAGAAAACAACACAACCAGAGCCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WISASLRPATHQ*SSRKQHNQSQA Trigger: TGCTTGGCTCTGGTTGTGTTGTTTTCTGGAACTCAATTGGTGGGTGGCTGGCCTCAAACTCGCAGAAATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS-3UTR GCA 90 bp | AGACAGTTGGCTATCCCGGGAGTCATTTTTGACTGTCATGATTTGGGCTCCCAATCTTCCTTCCTCAAATaGTCAAGAGCTACCAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RQLAIPGVIFDCHDLGSQSSFLK*SRATSG Trigger: GCCGCTGGTAGCTCTTGAGCATTTGAGGAAGGAAGA...TTGGGAGCCCAAATCATGACAGTCAAAAATGACTCCCGGGATAGCCAACTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CAA 72 bp | CAGCCTCGTGTTCTTAATCAAGGACAGTTTCGTCACTaGGGAGACAGTTGGCTATCCCGGGAGTCATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QPRVLNQGQFRH*GDSWLSRESFL Trigger: CAAAAATGACTCCCGGGATAGCCAACTGTCTCCCAAGTGACGAAACTGTCCTTGATTAAGAACACGAGGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCCACTGGCTGCTGTGAGTTTATTAGTGCAGGAGTCCTGTCATGTCCAGAAAAATCATCAAGATCTTaGTCCAGCGTTTGGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AATGCCEFISAGVLSCPEKSSRS*SSVWTL Trigger: CAGAGTCCAAACGCTGGAGCAAGATCTTGATGATTT...TTCTGGACATGACAGGACTCCTGCACTAATAAACTCACAGCAGCCAGTGGCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CAA 72 bp | GACCCTTTTCTGTCATTGGATTTTTCAGAGGGAGAATaGATGAACCGCCCTCAGACCTTAAGGCCTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DPFLSLDFSEGE*MNRPQTLRPLL Trigger: CAGAAGAGGCCTTAAGGTCTGAGGGCGGTTCATCAATTCTCCCTCTGAAAAATCCAATGACAGAAAAGGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CAA 72 bp | GCCCAGATCAATAGCAGTGAGTCACTGGCTGTATATTaGGATGGTTTGATCACTAGCTTACAATACACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AQINSSESLAVY*DGLITSLQYTA Trigger: GGCAGTGTATTGTAAGCTAGTGATCAAACCATCCAAATATACAGCCAGTGACTCACTGCTATTGATCTGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CAA 72 bp | AATAGCAGTGAGTCACTGGCTGTATATTTGGATGGTTaGATCACTAGCTTACAATACACTGCCAGGACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NSSESLAVYLDG*ITSLQYTARTL Trigger: AAGGGTCCTGGCAGTGTATTGTAAGCTAGTGATCAAACCATCCAAATATACAGCCAGTGACTCACTGCTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| 3UTR CAA 72 bp | GTTCAAATCCCTATGCTGGACTTCACAGTCATGATGTaGAGAGGTTTAATCTCAGCTTCTTTTTCCCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VQIPMLDFTVMM*RGLISASFSPI Trigger: AATGGGGGAAAAAGAAGCTGAGATTAAACCTCTCAACATCATGACTGTGAAGTCCAGCATAGGGATTTGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS TCA 90 bp | CCGTGGCGCTCCCACCACGAGCTCGCCCGCACCACATCCTGCACCTaGCGCTCCAGCTCTTTCAGCAGCGCCTCAGCAGCGCCGTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PWRSHHELARTTSCT*RSSSFSSASAAPSP Trigger: GGGGGACGGCGCTGCTGAGGCGCTGCTGAAAGAGCTGGAGCGTCAGGTGCAGGATGTGGTGCGGGCGAGCTCGTGGTGGGAGCGCCACGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS TCA 90 bp | TATGGGCGCGTAGGCACAGGAACCCTGCCGGCAAGGCGAGCAGGCTaGGAGCGAGGATGGCGCAGTCCACACCGTGGCGCTCCCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: YGRVGTGTLPARRAG*ERGWRSPHRGAPTT Trigger: CGTGGTGGGAGCGCCACGGTGTGGACTGCGCCATCCTCGCTCTCAGCCTGCTCGCCTTGCCGGCAGGGTTCCTGTGCCTACGCGCCCATA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS GCA 90 bp | GAAGAGGTGGTGCTCCACGTGGCAGCTGATGAGGGAGTGGCCGAATaGCCAGTCCAACACCAGCTGCCGTGGCAGGTTCAGAACCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EEVVLHVAADEGVAE*PVQHQLPWQVQNPQ Trigger: CTGGGGGTTCTGAACCTGCCACGGCAGCTGGTGTTGGACTGGGCATTCGGCCACTCCCTCATCAGCTGCCACGTGGAGCACCACCTCTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS CCA 90 bp | GCTGATGAGGGAGTGGCCGAATGCCCAGTCCAACACCAGCTGCCGTaGCAGGTTCAGAACCCCCAGGGTCATCATGTGGATCCTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ADEGVAECPVQHQLP*QVQNPQGHHVDPPG Trigger: CCCAGGAGGATCCACATGATGACCCTGGGGGTTCTGAACCTGCCACGGCAGCTGGTGTTGGACTGGGCATTCGGCCACTCCCTCATCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS CCA 90 bp | AGCCAAGGGAAGAGGTGGTGCTCCACGTGGCAGCTGATGAGGGAGTaGCCGAATGCCCAGTCCAACACCAGCTGCCGTGGCAGGTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SQGKRWCSTWQLMRE*PNAQSNTSCRGRFR Trigger: TCTGAACCTGCCACGGCAGCTGGTGTTGGACTGGGCATTCGGCCACTCCCTCATCAGCTGCCACGTGGAGCACCACCTCTTCCCTTGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS CCA 90 bp | GGCTTCACCTTCAAGCACATGTGGTCAGAGAGCCAAGGGAAGAGGTaGTGCTCCACGTGGCAGCTGATGAGGGAGTGGCCGAATGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GFTFKHMWSESQGKR*CSTWQLMREWPNAQ Trigger: CTGGGCATTCGGCCACTCCCTCATCAGCTGCCACGTGGAGCACCACCTCTTCCCTTGGCTCTCTGACCACATGTGCTTGAAGGTGAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS-3UTR CAA 90 bp | CTGCATCTGTCTAGGCCACATCAGCCCCCAGAGATGGGTTCTAGCAGGCTGGTCATCTTGCTCCAGCGTTaGGACTCTGTGAGGGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LHLSRPHQPPEMGSSRLVILLQR*DSVRAL Trigger: CAGTGCCCTCACAGAGTCCAAACGCTGGAGCAAGAT...GACCAGCCTGCTAGAACCCATCTCTGGGGGCTGATGTGGCCTAGACAGATGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS-3UTR CAA 90 bp | CCTTTCATCTCACTGACTCTGTGGGTCCTAGAGCTGAGCCCAGTGTGGCACAGGATCCTCCTGGGCTTCTaGTCCGGGGAGAACATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PFISLTLWVLELSPVWHRILLGF*SGENIG Trigger: GCCTATGTTCTCCCCGGACAAGAAGCCCAGGAGGAT...CCTGTGCCACACTGGGCTCAGCTCTAGGACCCACAGAGTCAGTGAGATGAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS GCA 90 bp | AAGCCCAAAGTCCGCAGTGCAGTCCTCGGCTCTTCCTTCCTCAAATaGTCAAGAGCTACCAGCGGCGTTATGATGGGGACCAAAAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: KPKVRSAVLGSSFLK*SRATSGVMMGTKSG Trigger: GCCGCTTTTGGTCCCCATCATAACGCCGCTGGTAGCTCTTGAGCATTTGAGGAAGGAAGAGCCGAGGACTGCACTGCGGACTTTGGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS CCA 90 bp | TCGTGGAGAAACTTCGACACCAAGGGCTTCACCTTCAAGCACATGTaGTCAGAGAGCCAAGGGAAGAGGTGGTGCTCCACGTGGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SWRNFDTKGFTFKHM*SESQGKRWCSTWQL Trigger: CAGCTGCCACGTGGAGCACCACCTCTTCCCTTGGCTCTCTGACCACATGTGCTTGAAGGTGAAGCCCTTGGTGTCGAAGTTTCTCCACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS GCA 90 bp | GTACTGAGAGTAAAGGCCCAGGCAGATGAAGCCCAAAGTCCGCAGTaGAGTCCTCGGCTCTTCCTTCCTCAAATGCTCAAGAGCTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLRVKAQADEAQSPQ*SPRLFLPQMLKSYQ Trigger: CTGGTAGCTCTTGAGCATTTGAGGAAGGAAGAGCCGAGGACTGCACTGCGGACTTTGGGCTTCATCTGCCTGGGCCTTTACTCTCAGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS TCA 90 bp | GAACATGTAAACGTAGCGGTTGAGGAGAGGCACCTTCCACGTGCTTaGATCGCCCAGACCCACCACGTTGGTGTAAACGTGGTGCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: EHVNVAVEERHLPRA*IAQTHHVGVNVVQI Trigger: AATCTGCACCACGTTTACACCAACGTGGTGGGTCTGGGCGATTCAAGCACGTGGAAGGTGCCTCTCCTCAACCGCTACGTTTACATGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS TCA 90 bp | CCAGACCCACCACGTTGGTGTAAACGTGGTGCAGATTCACGTGGTTaGATTTGGCGAACTCTGCAGAAAAGGCTGTGCACACCTCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PDPPRWCKRGADSRG*IWRTLQKRLCTPPK Trigger: TTTTGGAGGTGTGCACAGCCTTTTCTGCAGAGTTCGCCAAATTCAACCACGTGAATCTGCACCACGTTTACACCAACGTGGTGGGTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS TCA 90 bp | GAACTCCTCATAGCGGCTGAGGAACAGCTGGAATCGAGCCAGGTATaGGTCTTCATTGTAAGGCAGCTGCTTCTCGTGGAGAAACTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: ELLIAAEEQLESSQV*VFIVRQLLLVEKLR Trigger: TCGAAGTTTCTCCACGAGAAGCAGCTGCCTTACAATGAAGACTCATACCTGGCTCGATTCCAGCTGTTCCTCAGCCGCTATGAGGAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGAAATACACTCCCTTTCATCTCACTGACTCTGTGGGTCCTAGAGCTGAGCAAAATCATCAAGATCTaGCTCCAGCGTTTGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGNTLPFISLTLWVLELSKIIKI*LQRLDS Trigger: AGAGTCCAAACGCTGGAGCAAGATCTTGATGATTTT...GCTCAGCTCTAGGACCCACAGAGTCAGTGAGATGAAAGGGAGTGTATTTCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS CCA 72 bp | AGCAGGCTGAGAGCGAGGATGGCGCAGTCCACACCGTaGCGCTCCCACCACGAGCTCGCCCGCACCACATCC | + |
|
Preference number: 6 (lower is better) Translates to: SRLRARMAQSTP*RSHHELARTTS Trigger: GGATGTGGTGCGGGCGAGCTCGTGGTGGGAGCGCCACGGTGTGGACTGCGCCATCCTCGCTCTCAGCCTGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS TCA 72 bp | GTAGGCACAGGAACCCTGCCGGCAAGGCGAGCAGGCTaGGAGCGAGGATGGCGCAGTCCACACCGTGGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: VGTGTLPARRAG*ERGWRSPHRGA Trigger: AGCGCCACGGTGTGGACTGCGCCATCCTCGCTCTCAGCCTGCTCGCCTTGCCGGCAGGGTTCCTGTGCCTAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS GCA 72 bp | GTGCTCCACGTGGCAGCTGATGAGGGAGTGGCCGAATaGCCAGTCCAACACCAGCTGCCGTGGCAGGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: VLHVAADEGVAE*PVQHQLPWQVQ Trigger: CTGAACCTGCCACGGCAGCTGGTGTTGGACTGGGCATTCGGCCACTCCCTCATCAGCTGCCACGTGGAGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS CCA 72 bp | AAGAGGTGGTGCTCCACGTGGCAGCTGATGAGGGAGTaGCCGAATGCCCAGTCCAACACCAGCTGCCGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: KRWCSTWQLMRE*PNAQSNTSCRG Trigger: GCCACGGCAGCTGGTGTTGGACTGGGCATTCGGCCACTCCCTCATCAGCTGCCACGTGGAGCACCACCTCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS GCA 72 bp | ATGAGGGAGTGGCCGAATGCCCAGTCCAACACCAGCTaGCGTGGCAGGTTCAGAACCCCCAGGGTCATCATG | + |
|
Preference number: 6 (lower is better) Translates to: MREWPNAQSNTS*RGRFRTPRVIM Trigger: CATGATGACCCTGGGGGTTCTGAACCTGCCACGGCAGCTGGTGTTGGACTGGGCATTCGGCCACTCCCTCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS CCA 72 bp | GGAGTGGCCGAATGCCCAGTCCAACACCAGCTGCCGTaGCAGGTTCAGAACCCCCAGGGTCATCATGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GVAECPVQHQLP*QVQNPQGHHVD Trigger: ATCCACATGATGACCCTGGGGGTTCTGAACCTGCCACGGCAGCTGGTGTTGGACTGGGCATTCGGCCACTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS CAA 72 bp | ACCCCCAGGGTCATCATGTGGATCCTCCTGGGCTTCTaGTCCGGGGAGAACATAGGCAGTCCGATGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TPRVIMWILLGF*SGENIGSPMCW Trigger: CCAGCACATCGGACTGCCTATGTTCTCCCCGGACAAGAAGCCCAGGAGGATCCACATGATGACCCTGGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS GCA 72 bp | GTCCGCAGTGCAGTCCTCGGCTCTTCCTTCCTCAAATaGTCAAGAGCTACCAGCGGCGTTATGATGGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: VRSAVLGSSFLK*SRATSGVMMGT Trigger: GGTCCCCATCATAACGCCGCTGGTAGCTCTTGAGCATTTGAGGAAGGAAGAGCCGAGGACTGCACTGCGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS TCA 72 bp | AACGTAGCGGTTGAGGAGAGGCACCTTCCACGTGCTTaGATCGCCCAGACCCACCACGTTGGTGTAAACGTG | + |
|
Preference number: 6 (lower is better) Translates to: NVAVEERHLPRA*IAQTHHVGVNV Trigger: CACGTTTACACCAACGTGGTGGGTCTGGGCGATTCAAGCACGTGGAAGGTGCCTCTCCTCAACCGCTACGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS TCA 72 bp | CCAAAAGCGGCCCAAGGAACATGTAAACGTAGCGGTTaGGGAGAGGCACCTTCCACGTGCTTGAATCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PKAAQGTCKRSG*GEAPSTCLNRP Trigger: TGGGCGATTCAAGCACGTGGAAGGTGCCTCTCCTCAACCGCTACGTTTACATGTTCCTTGGGCCGCTTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS GCA 72 bp | GTAAAGGCCCAGGCAGATGAAGCCCAAAGTCCGCAGTaGAGTCCTCGGCTCTTCCTTCCTCAAATGCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: VKAQADEAQSPQ*SPRLFLPQMLK Trigger: CTTGAGCATTTGAGGAAGGAAGAGCCGAGGACTGCACTGCGGACTTTGGGCTTCATCTGCCTGGGCCTTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS CCA 72 bp | AACTTCGACACCAAGGGCTTCACCTTCAAGCACATGTaGTCAGAGAGCCAAGGGAAGAGGTGGTGCTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: NFDTKGFTFKHM*SESQGKRWCST Trigger: CGTGGAGCACCACCTCTTCCCTTGGCTCTCTGACCACATGTGCTTGAAGGTGAAGCCCTTGGTGTCGAAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS CAA 90 bp | AGGTTCAGAACCCCCAGGGTCATCATGTGGATCCTCCTGGGCTTCTaGTCCGGGGAGAACATAGGCAGTCCGATGTGCTGGAAGATATTG | + |
|
Preference number: 6 (lower is better) Translates to: RFRTPRVIMWILLGF*SGENIGSPMCWKIL Trigger: CAATATCTTCCAGCACATCGGACTGCCTATGTTCTCCCCGGACAAGAAGCCCAGGAGGATCCACATGATGACCCTGGGGGTTCTGAACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS TCA 72 bp | ATAGCGGCTGAGGAACAGCTGGAATCGAGCCAGGTATaGGTCTTCATTGTAAGGCAGCTGCTTCTCGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: IAAEEQLESSQV*VFIVRQLLLVE Trigger: CTCCACGAGAAGCAGCTGCCTTACAATGAAGACTCATACCTGGCTCGATTCCAGCTGTTCCTCAGCCGCTAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
||
| CDS TCA 72 bp | CCACGTTGGTGTAAACGTGGTGCAGATTCACGTGGTTaGATTTGGCGAACTCTGCAGAAAAGGCTGTGCACA | + |
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Preference number: 6 (lower is better) Translates to: PRWCKRGADSRG*IWRTLQKRLCT Trigger: TGTGCACAGCCTTTTCTGCAGAGTTCGCCAAATTCAACCACGTGAATCTGCACCACGTTTACACCAACGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056153.8 |
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