Pregenerated sensors for FADS3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024664Ensembl transcript IDs: ENSMUST00000115995.4, ENSMUST00000237226.2, ENSMUST00000237672.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGCGATGGGACCTCTCCTTCCCTCGCTTTATCCAGGAGGCTTCACTaGTACTCCCCTAGGCAAGGAGGCCACAGGGAGTGGAGAGAGGGT | + |
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Preference number: 1 (lower is better) Translates to: RDGTSPSLALSRRLH*YSPRQGGHREWREG Trigger: ACCCTCTCTCCACTCCCTGTGGCCTCCTTGCCTAGGGGAGTACCAGTGAAGCCTCCTGGATAAAGCGAGGGAAGGAGAGGTCCCATCGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR CCA 90 bp | CAGCCTAAAGCTTCTGAGACCTCTTTAAAGATCTGTAGCCCAGCTTaGAGCCATGGGGTGTCGGTGCTGGGGCTGACAGAGTCCACTGTC | + |
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Preference number: 1 (lower is better) Translates to: QPKASETSLKICSPA*SHGVSVLGLTESTV Trigger: GACAGTGGACTCTGTCAGCCCCAGCACCGACACCCCATGGCTCCAAGCTGGGCTACAGATCTTTAAAGAGGTCTCAGAAGCTTTAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR TCA 90 bp | TGGAGGGAAAGAGCACATTCCCCATGGCTACCACTAGGGGCAGCATaGAACACAGTCCAAGCTGCAGTCAGTCATGTGGATACCCGTGGA | + |
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Preference number: 1 (lower is better) Translates to: WRERAHSPWLPLGAA*NTVQAAVSHVDTRG Trigger: TCCACGGGTATCCACATGACTGACTGCAGCTTGGACTGTGTTTCATGCTGCCCCTAGTGGTAGCCATGGGGAATGTGCTCTTTCCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR CCA 90 bp | AAGCTGCAGTCAGTCATGTGGATACCCGTGGATGGTGCTGCAGGCTaGGTGATTTCCTCTGAGCAAGACACATCTCTAAGCACGTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: KLQSVMWIPVDGAAG*VISSEQDTSLSTSE Trigger: CTCTGACGTGCTTAGAGATGTGTCTTGCTCAGAGGAAATCACCCAGCCTGCAGCACCATCCACGGGTATCCACATGACTGACTGCAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR TCA 90 bp | GAGCAAGACACATCTCTAAGCACGTCAGAGACACCAACAGAAATCTaGCTTTGCCAGAGTGGAGACCAAGTGCTTTCAGACAGTATGCTG | + |
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Preference number: 1 (lower is better) Translates to: EQDTSLSTSETPTEI*LCQSGDQVLSDSML Trigger: CAGCATACTGTCTGAAAGCACTTGGTCTCCACTCTGGCAAAGTCAGATTTCTGTTGGTGTCTCTGACGTGCTTAGAGATGTGTCTTGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR TCA 90 bp | ATGGCCCTTCCACCAAGTCTGAAGCAGATTTGGCTCCAAAATTCATaGAAGTCCAACACTTGGCTCCATGTGTCTGGGTTGCTTTTTATA | + |
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Preference number: 1 (lower is better) Translates to: MALPPSLKQIWLQNS*KSNTWLHVSGLLFI Trigger: TATAAAAAGCAACCCAGACACATGGAGCCAAGTGTTGGACTTTCATGAATTTTGGAGCCAAATCTGCTTCAGACTTGGTGGAAGGGCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR TCA 90 bp | AGGAAAGGGGACTTCTGCAGGGAACGGAAGTACAGAAAGATGGTGTaGTACACTCTGGGTATAAGAAATTTGCTTTTGAGGCAAGAAGTA | + |
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Preference number: 1 (lower is better) Translates to: RKGDFCRERKYRKMV*YTLGIRNLLLRQEV Trigger: TACTTCTTGCCTCAAAAGCAAATTTCTTATACCCAGAGTGTATCACACCATCTTTCTGTACTTCCGTTCCCTGCAGAAGTCCCCTTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR CCA 90 bp | TCTAGGGCATCCTTTTTATTTCTCATCGCGTTGAAAGCGACACTTTaGATTTACTTTGGATTTAAGAGCTTGAATTCCTTCCTTGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: SRASFLFLIALKATL*IYFGFKSLNSFLEV Trigger: GACCTCAAGGAAGGAATTCAAGCTCTTAAATCCAAAGTAAATCCAAAGTGTCGCTTTCAACGCGATGAGAAATAAAAAGGATGCCCTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR-3UTR TCA 90 bp | CTGAATGGAACAGAGCAAGGGAGGTACCCAGACGCGATGGGACCTCTCCTTCCCCTGACCAGAAAATGCTaGGGACTGAGGAAAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LNGTEQGRYPDAMGPLLPLTRKC*GLRKAS Trigger: GCTGGCTTTCCTCAGTCCTCAGCATTTTCTGGTCAG...GGGAAGGAGAGGTCCCATCGCGTCTGGGTACCTCCCTTGCTCTGTTCCATTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR-3UTR CCA 90 bp | GGTGCTGGGGCTGACAGAGTCCACTGTCCCCTCTCCTCTCTCACCAAACTTGGGGACTTAGGGACAGAATaGCCACACTTGAGTCACTGC | + |
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Preference number: 2 (lower is better) Translates to: GAGADRVHCPLSSLTKLGDLGTE*PHLSHC Trigger: GCAGTGACTCAAGTGTGGCCATTCTGTCCCTAAGTC...CCCAAGTTTGGTGAGAGAGGAGAGGGGACAGTGGACTCTGTCAGCCCCAGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR-3UTR GCA 90 bp | GGTGCTGGGGCTGACAGAGTCCACTGTCCCCTCTCCTCTCTCACCAAACTTGGGTGCTCTAGGAAAACATaGTATGCTCACCGTGTCATT | + |
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Preference number: 2 (lower is better) Translates to: GAGADRVHCPLSSLTKLGCSRKT*YAHRVI Trigger: AATGACACGGTGAGCATAGCATGTTTTCCTAGAGCA...CCCAAGTTTGGTGAGAGAGGAGAGGGGACAGTGGACTCTGTCAGCCCCAGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR-3UTR GCA 90 bp | AGAGTCCACTGTCCCCTCTCCTCTCTCACCAAACTTGGGTTTAGGACAGTAGTAGCACTAGGGAAGGGGTaGCTTCCCAGATTGCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: RVHCPLSSLTKLGFRTVVALGKG*LPRLQC Trigger: GCACTGCAATCTGGGAAGGCACCCCTTCCCTAGTGC...TACTACTGTCCTAAACCCAAGTTTGGTGAGAGAGGAGAGGGGACAGTGGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR-3UTR TCA 90 bp | TATATAACAGGGCTTAGAAGTAGCTTTCAAGGGATCTTCAGCCCTTACCTGAGGTGCCCAGTGACTCGGTaGCTGCTGGAGTCTGGACCC | + |
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Preference number: 2 (lower is better) Translates to: YITGLRSSFQGIFSPYLRCPVTR*LLESGP Trigger: GGGTCCAGACTCCAGCAGTCACCGAGTCACTGGGCA...CCTCAGGTAAGGGCTGAAGATCCCTTGAAAGCTACTTCTAAGCCCTGTTATATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR-3UTR TCA 90 bp | TTGTCTCAGAGAACAAAACAGTTTAGCCCAGAGGCATGGGGTCATACGCATAAAATCCCAGCTCCACAATaGTGGCCCTTCCACCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: LSQRTKQFSPEAWGHTHKIPAPQ*WPFHQV Trigger: GACTTGGTGGAAGGGCCATCATTGTGGAGCTGGGAT...TTTATGCGTATGACCCCATGCCTCTGGGCTAAACTGTTTTGTTCTCTGAGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR-3UTR TCA 90 bp | GCGTTGAAAGCGACACTTTGGATTTACTTTGGATTTAAGAGCTTGAATTCCTTCTGTCGGTGCTGGGGCTaGCAGAGTCCACTGTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: ALKATLWIYFGFKSLNSFCRCWG*QSPLSP Trigger: AGGGGACAGTGGACTCTGTCAGCCCCAGCACCGACA...GAAGGAATTCAAGCTCTTAAATCCAAAGTAAATCCAAAGTGTCGCTTTCAACGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR-3UTR CCA 90 bp | GATGGTGTGATACACTCTGGGTATAAGAAATTTGCTTTTGAGGCAAGAAGTAGTGGAGGCCACAGGGAGTaGAGAGAGGGTGGGGTAGTC | + |
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Preference number: 2 (lower is better) Translates to: DGVIHSGYKKFAFEARSSGGHRE*REGGVV Trigger: GACTACCCCACCCTCTCTCCACTCCCTGTGGCCTCC...ACTACTTCTTGCCTCAAAAGCAAATTTCTTATACCCAGAGTGTATCACACCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR CAA 90 bp | CCTCAGCTCCTACAGGAGATGCCCAGTTTAGCATTTCTGCTGGGATaGCTACAGCCTAAAGCTTCTGAGACCTCTTTAAAGATCTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: PQLLQEMPSLAFLLG*LQPKASETSLKICS Trigger: GCTACAGATCTTTAAAGAGGTCTCAGAAGCTTTAGGCTGTAGCAATCCCAGCAGAAATGCTAAACTGGGCATCTCCTGTAGGAGCTGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR-3UTR CCA 90 bp | TATATAACAGGGCTTAGAAGTAGCTTTCAAGGGATCTTCAGCCCTTACCTGAGGCCAGAGCACCCAGGGTaGAGAGGAACTCCTTACATT | + |
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Preference number: 2 (lower is better) Translates to: YITGLRSSFQGIFSPYLRPEHPG*RGTPYI Trigger: AATGTAAGGAGTTCCTCTCCACCCTGGGTGCTCTGG...CCTCAGGTAAGGGCTGAAGATCCCTTGAAAGCTACTTCTAAGCCCTGTTATATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR-3UTR TCA 90 bp | GAGAAAGCAAAGGGCTTGTCTCAGAGAACAAAACAGTTTAGCCCAGAGGCATGGTGGCTCCAAAATTCATaGAAGTCCAACACTTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: EKAKGLSQRTKQFSPEAWWLQNS*KSNTWL Trigger: GAGCCAAGTGTTGGACTTTCATGAATTTTGGAGCCA...CCATGCCTCTGGGCTAAACTGTTTTGTTCTCTGAGACAAGCCCTTTGCTTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR-3UTR TCA 90 bp | TCTCAGAGAACAAAACAGTTTAGCCCAGAGGCATGGGGTCATACGCATAAAGCTGCATGCCTACAGCACTaGGTTGGATGTAAAGCACTA | + |
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Preference number: 2 (lower is better) Translates to: SQRTKQFSPEAWGHTHKAACLQH*VGCKAL Trigger: TAGTGCTTTACATCCAACTCAGTGCTGTAGGCATGC...AGCTTTATGCGTATGACCCCATGCCTCTGGGCTAAACTGTTTTGTTCTCTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR-3UTR CCA 90 bp | GATGGTGTGATACACTCTGGGTATAAGAAATTTGCTTTTGAGGCAAGAAGTAGTCAGAGCTCCCACTACTaGGCTCTCCTGCATAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: DGVIHSGYKKFAFEARSSQSSHY*ALLHRG Trigger: CCCTCTATGCAGGAGAGCCCAGTAGTGGGAGCTCTG...ACTACTTCTTGCCTCAAAAGCAAATTTCTTATACCCAGAGTGTATCACACCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR-3UTR TCA 90 bp | TATATAACAGGGCTTAGAAGTAGCTTTCAAGGGATCTTCAGCCCTTACCTGAGGCAGAATGGCCACACTTaGGTCACTGCATATTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: YITGLRSSFQGIFSPYLRQNGHT*VTAYSA Trigger: TGCTGAATATGCAGTGACTCAAGTGTGGCCATTCTG...CCTCAGGTAAGGGCTGAAGATCCCTTGAAAGCTACTTCTAAGCCCTGTTATATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR-3UTR GCA 90 bp | TATATAACAGGGCTTAGAAGTAGCTTTCAAGGGATCTTCAGCCCTTACCTGAGGCATTTCTGCTGGGATTaGTACAGCCTAAAGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: YITGLRSSFQGIFSPYLRHFCWD*YSLKLL Trigger: CAGAAGCTTTAGGCTGTAGCAATCCCAGCAGAAATG...CCTCAGGTAAGGGCTGAAGATCCCTTGAAAGCTACTTCTAAGCCCTGTTATATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR-3UTR CCA 90 bp | CTACAAGTATATATAACAGGGCTTAGAAGTAGCTTTCAAGGGATCTTCAGCCCTGAAGGGAGAGCTGAATaGAACAGAGCAAGGGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: LQVYITGLRSSFQGIFSPEGRAE*NRAREV Trigger: TACCTCCCTTGCTCTGTTCCATTCAGCTCTCCCTTC...AGGGCTGAAGATCCCTTGAAAGCTACTTCTAAGCCCTGTTATATATACTTGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGAGAACAAAACAGTTTAGCCCAGAGGCATGGGGTCATACGCATAAAGCTATAAAGCAAAACTTCTaGCTTGAGCTGTTCAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: SQRTKQFSPEAWGHTHKAIKQNF*LELFKG Trigger: ACCTTTGAACAGCTCAAGGCAGAAGTTTTGCTTTAT...AGCTTTATGCGTATGACCCCATGCCTCTGGGCTAAACTGTTTTGTTCTCTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR-3UTR GCA 90 bp | TATATAACAGGGCTTAGAAGTAGCTTTCAAGGGATCTTCAGCCCTTACCTGAGGTTTCCTTCCAGTTCTTaGTCTAGGAAAACATGCTAT | + |
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Preference number: 2 (lower is better) Translates to: YITGLRSSFQGIFSPYLRFPSSS*SRKTCY Trigger: ATAGCATGTTTTCCTAGAGCAAGAACTGGAAGGAAA...CCTCAGGTAAGGGCTGAAGATCCCTTGAAAGCTACTTCTAAGCCCTGTTATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGAGAACAAAACAGTTTAGCCCAGAGGCATGGGGTCATACGCATAAAGCTTTGGCTCCATGTGTCTaGGTTGCTTTTTATATAAAA | + |
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Preference number: 2 (lower is better) Translates to: SQRTKQFSPEAWGHTHKALAPCV*VAFYIK Trigger: TTTTATATAAAAAGCAACCCAGACACATGGAGCCAA...AGCTTTATGCGTATGACCCCATGCCTCTGGGCTAAACTGTTTTGTTCTCTGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR CAA 90 bp | TTTGGCGCAAGCCTTTCTAGGGCATCCTTTTTATTTCTCATCGCGTaGAAAGCGACACTTTGGATTTACTTTGGATTTAAGAGCTTGAAT | + |
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Preference number: 2 (lower is better) Translates to: FGASLSRASFLFLIA*KATLWIYFGFKSLN Trigger: ATTCAAGCTCTTAAATCCAAAGTAAATCCAAAGTGTCGCTTTCAACGCGATGAGAAATAAAAAGGATGCCCTAGAAAGGCTTGCGCCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR-3UTR TCA 90 bp | GACTTCCTACTGAGTTACATCCCCAGACCCTTAAAATATTTATTATCATCTCAATATTTCTCATCGCGTTaGAAGCGACACTTTGGATTT | + |
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Preference number: 2 (lower is better) Translates to: DFLLSYIPRPLKYLLSSQYFSSR*KRHFGF Trigger: AAATCCAAAGTGTCGCTTTCAACGCGATGAGAAATA...TTGAGATGATAATAAATATTTTAAGGGTCTGGGGATGTAACTCAGTAGGAAGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR TCA 72 bp | CAGCAGGGGGTGAGGATGACTGTCAATCTTGCCCAGTaGCTCGGTGACTGCTGGAGTCTGGACCCTTACCCC | + |
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Preference number: 3 (lower is better) Translates to: QQGVRMTVNLAQ*LGDCWSLDPYP Trigger: GGGGTAAGGGTCCAGACTCCAGCAGTCACCGAGTCACTGGGCAAGATTGACAGTCATCCTCACCCCCTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR CCA 72 bp | ACCTCTCCTTCCCTCGCTTTATCCAGGAGGCTTCACTaGTACTCCCCTAGGCAAGGAGGCCACAGGGAGTGG | + |
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Preference number: 3 (lower is better) Translates to: TSPSLALSRRLH*YSPRQGGHREW Trigger: CCACTCCCTGTGGCCTCCTTGCCTAGGGGAGTACCAGTGAAGCCTCCTGGATAAAGCGAGGGAAGGAGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR CCA 72 bp | CCCCATCCACCTAATCCCAGGGAAGGGAGAGCTGAATaGAACAGAGCAAGGGAGGTACCCAGACGCGATGGG | + |
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Preference number: 3 (lower is better) Translates to: PHPPNPREGRAE*NRAREVPRRDG Trigger: CCCATCGCGTCTGGGTACCTCCCTTGCTCTGTTCCATTCAGCTCTCCCTTCCCTGGGATTAGGTGGATGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR TCA 72 bp | TGTGCCATGGCCATAGGATTGCTGACCAGAAAATGCTaGGGACTGAGGAAAGCCAGCAGGACCAGGCGGGCA | + |
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Preference number: 3 (lower is better) Translates to: CAMAIGLLTRKC*GLRKASRTRRA Trigger: TGCCCGCCTGGTCCTGCTGGCTTTCCTCAGTCCTCAGCATTTTCTGGTCAGCAATCCTATGGCCATGGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR CCA 72 bp | AGTAGCTGTTGCCTCCATGACCCAGAGCACCCAGGGTaGAGAGGAACTCCTTACATTCCATCCCAGCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: SSCCLHDPEHPG*RGTPYIPSQLH Trigger: GTGGAGCTGGGATGGAATGTAAGGAGTTCCTCTCCACCCTGGGTGCTCTGGGTCATGGAGGCAACAGCTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR TCA 72 bp | ACCCGTGGATGGTGCTGCAGGCTGGGTGATTTCCTCTaGGCAAGACACATCTCTAAGCACGTCAGAGACACC | + |
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Preference number: 3 (lower is better) Translates to: TRGWCCRLGDFL*ARHISKHVRDT Trigger: GGTGTCTCTGACGTGCTTAGAGATGTGTCTTGCTCAGAGGAAATCACCCAGCCTGCAGCACCATCCACGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR TCA 72 bp | AGAGCACATTCCCCATGGCTACCACTAGGGGCAGCATaGAACACAGTCCAAGCTGCAGTCAGTCATGTGGAT | + |
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Preference number: 3 (lower is better) Translates to: RAHSPWLPLGAA*NTVQAAVSHVD Trigger: ATCCACATGACTGACTGCAGCTTGGACTGTGTTTCATGCTGCCCCTAGTGGTAGCCATGGGGAATGTGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR CCA 72 bp | TCAGTCATGTGGATACCCGTGGATGGTGCTGCAGGCTaGGTGATTTCCTCTGAGCAAGACACATCTCTAAGC | + |
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Preference number: 3 (lower is better) Translates to: SVMWIPVDGAAG*VISSEQDTSLS Trigger: GCTTAGAGATGTGTCTTGCTCAGAGGAAATCACCCAGCCTGCAGCACCATCCACGGGTATCCACATGACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR-3UTR CAA 90 bp | GAGAAAGCAAAGGGCTTGTCTCAGAGAACAAAACAGTTTAGCCCAGAGGCATGGTCCACCCTGGTCCTGTaGGACATGTGCCATGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: EKAKGLSQRTKQFSPEAWSTLVL*DMCHGH Trigger: ATGGCCATGGCACATGTCCAACAGGACCAGGGTGGA...CCATGCCTCTGGGCTAAACTGTTTTGTTCTCTGAGACAAGCCCTTTGCTTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR CCA 72 bp | GTCATTTTAAGTATGTTCCCTCCACCCTGGTCCTGTTaGACATGTGCCATGGCCATAGGATTGCTGACCAGA | + |
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Preference number: 3 (lower is better) Translates to: VILSMFPPPWSC*TCAMAIGLLTR Trigger: TCTGGTCAGCAATCCTATGGCCATGGCACATGTCCAACAGGACCAGGGTGGAGGGAACATACTTAAAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR TCA 72 bp | CCACCAAGTCTGAAGCAGATTTGGCTCCAAAATTCATaGAAGTCCAACACTTGGCTCCATGTGTCTGGGTTG | + |
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Preference number: 3 (lower is better) Translates to: PPSLKQIWLQNS*KSNTWLHVSGL Trigger: CAACCCAGACACATGGAGCCAAGTGTTGGACTTTCATGAATTTTGGAGCCAAATCTGCTTCAGACTTGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR-3UTR CAA 90 bp | CTACAAGTATATATAACAGGGCTTAGAAGTAGCTTTCAAGGGATCTTCAGCCCTACAGAATGGCCACACTaGAGTCACTGCATATTCAGC | + |
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Preference number: 3 (lower is better) Translates to: LQVYITGLRSSFQGIFSPTEWPH*SHCIFS Trigger: GCTGAATATGCAGTGACTCAAGTGTGGCCATTCTGT...AGGGCTGAAGATCCCTTGAAAGCTACTTCTAAGCCCTGTTATATATACTTGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR TCA 72 bp | TGGGGAGAGAATCAAGATAAAGCAAAACTTCTGCCTTaGGCTGTTCAAAGGTTGATAGTGCAGTCAACTGTC | + |
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Preference number: 3 (lower is better) Translates to: WGENQDKAKLLP*AVQRLIVQSTV Trigger: GACAGTTGACTGCACTATCAACCTTTGAACAGCTCAAGGCAGAAGTTTTGCTTTATCTTGATTCTCTCCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR TCA 72 bp | GACTTCTGCAGGGAACGGAAGTACAGAAAGATGGTGTaGTACACTCTGGGTATAAGAAATTTGCTTTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: DFCRERKYRKMV*YTLGIRNLLLR Trigger: CCTCAAAAGCAAATTTCTTATACCCAGAGTGTATCACACCATCTTTCTGTACTTCCGTTCCCTGCAGAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR TCA 72 bp | AAGCGACACTTTGGATTTACTTTGGATTTAAGAGCTTaGATTCCTTCCTTGAGGTCAAGCAGCCTTAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: KRHFGFTLDLRA*IPSLRSSSLKS Trigger: GGACTTAAGGCTGCTTGACCTCAAGGAAGGAATTCAAGCTCTTAAATCCAAAGTAAATCCAAAGTGTCGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR TCA 72 bp | TCAAACAGGATTTTAATAAGTCGCCTTGGCTGCCTTTaGACTTGTGATCCTTCTGTTAAGTACCTTGGACTA | + |
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Preference number: 3 (lower is better) Translates to: SNRILISRLGCL*TCDPSVKYLGL Trigger: TAGTCCAAGGTACTTAACAGAAGGATCACAAGTTCAAAGGCAGCCAAGGCGACTTATTAAAATCCTGTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115995.4 ENSMUST00000237226.2 |
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| 3UTR TCA 72 bp | GCCTTTCTAGGGCATCCTTTTTATTTCTCATCGCGTTaGAAGCGACACTTTGGATTTACTTTGGATTTAAGA | + |
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Preference number: 3 (lower is better) Translates to: AFLGHPFYFSSR*KRHFGFTLDLR Trigger: TCTTAAATCCAAAGTAAATCCAAAGTGTCGCTTTCAACGCGATGAGAAATAAAAAGGATGCCCTAGAAAGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR CCA 72 bp | TTGTCTCAGAGAACAAAACAGTTTAGCCCAGAGGCATaGGGTCATACGCATAAAGCTTTTAAATACATTTCT | + |
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Preference number: 3 (lower is better) Translates to: LSQRTKQFSPEA*GHTHKAFKYIS Trigger: AGAAATGTATTTAAAAGCTTTATGCGTATGACCCCATGCCTCTGGGCTAAACTGTTTTGTTCTCTGAGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR CCA 72 bp | TCCTTTTTATTTCTCATCGCGTTGAAAGCGACACTTTaGATTTACTTTGGATTTAAGAGCTTGAATTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SFLFLIALKATL*IYFGFKSLNSF Trigger: GAAGGAATTCAAGCTCTTAAATCCAAAGTAAATCCAAAGTGTCGCTTTCAACGCGATGAGAAATAAAAAGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR TCA 90 bp | GGTGCTGGGGCTGACAGAGTCCACTGTCCCCTCTCCTCTCTCACCAAACTTGGGGCTGTGCCCAGCGGCTaGTGTCGTAGACACGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GAGADRVHCPLSSLTKLGAVPSG*CRRHGA Trigger: AGCGCCGTGTCTACGACATCAGCCGCTGGGCACAGC...CCCAAGTTTGGTGAGAGAGGAGAGGGGACAGTGGACTCTGTCAGCCCCAGCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR TCA 90 bp | GGTGCTGGGGCTGACAGAGTCCACTGTCCCCTCTCCTCTCTCACCAAACTTGGGCACCAGCACTGGGCCTaGGAGATGGCCAGGATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GAGADRVHCPLSSLTKLGHQHWA*EMARIR Trigger: CCTGATCCTGGCCATCTCTCAGGCCCAGTGCTGGTG...CCCAAGTTTGGTGAGAGAGGAGAGGGGACAGTGGACTCTGTCAGCCCCAGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR TCA 90 bp | CCATCCCAGCTCCACAATGATGGCCCTTCCACCAAGTCTGAAGCAGATTTGGCTCACCGTGGTGGCCGATaGGGCGGCTACCCCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSQLHNDGPSTKSEADLAHRGGR*GGYPLG Trigger: ACCCAGGGGGTAGCCGCCTCATCGGCCACCACGGTG...AGCCAAATCTGCTTCAGACTTGGTGGAAGGGCCATCATTGTGGAGCTGGGATGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR CCA 90 bp | TCGCTTTATCCAGGAGGCTTCACTGGTACTCCCCTAGGCAAGGAGGCCACAGGGGAGCTCCATCCTGGCTaGGTTCCTCTGGGGCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLYPGGFTGTPLGKEATGELHPG*VPLGLA Trigger: AGCTAGCCCCAGAGGAACCCAGCCAGGATGGAGCTC...CCCTGTGGCCTCCTTGCCTAGGGGAGTACCAGTGAAGCCTCCTGGATAAAGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR TCA 90 bp | GTACCCAGACGCGATGGGACCTCTCCTTCCCTCGCTTTATCCAGGAGGCTTCACGGCTCTCCAGCACCCTaGCAGCAACAAAGAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VPRRDGTSPSLALSRRLHGSPAP*QQQRGA Trigger: TGCTCCTCTTTGTTGCTGTCAGGGTGCTGGAGAGCC...GTGAAGCCTCCTGGATAAAGCGAGGGAAGGAGAGGTCCCATCGCGTCTGGGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR CCA 90 bp | TCAATCTTGCCCAGTGACTCGGTGACTGCTGGAGTCTGGACCCTTACCCCTTCACCTGGTAGGTCATGCTaGCGGATCTGCTCCCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SILPSDSVTAGVWTLTPSPGRSC*RICSQR Trigger: CCGCTGGGAGCAGATCCGCCAGCATGACCTACCAGG...TGAAGGGGTAAGGGTCCAGACTCCAGCAGTCACCGAGTCACTGGGCAAGATTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR CCA 90 bp | GAGAAAGCAAAGGGCTTGTCTCAGAGAACAAAACAGTTTAGCCCAGAGGCATGGGAGGCGGCTACCCCCTaGGTGCCGCTGTGCCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: EKAKGLSQRTKQFSPEAWEAATP*VPLCPA Trigger: CGCTGGGCACAGCGGCACCCAGGGGGTAGCCGCCTC...CCATGCCTCTGGGCTAAACTGTTTTGTTCTCTGAGACAAGCCCTTTGCTTTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR CCA 90 bp | CTGAATGGAACAGAGCAAGGGAGGTACCCAGACGCGATGGGACCTCTCCTTCCCATGTCTTCAGCTGCCTaGCGCAAGGCTCGGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNGTEQGRYPDAMGPLLPMSSAA*RKARKS Trigger: GGACTTCCGAGCCTTGCGCCAGGCAGCTGAAGACAT...GGGAAGGAGAGGTCCCATCGCGTCTGGGTACCTCCCTTGCTCTGTTCCATTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR CCA 90 bp | GGTGCTGGGGCTGACAGAGTCCACTGTCCCCTCTCCTCTCTCACCAAACTTGGGGGAGCAGTGTCCCAGTaGCACCATAGAAGGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GAGADRVHCPLSSLTKLGGAVSQ*HHRRES Trigger: ACTCTCCCTTCTATGGTGCCACTGGGACACTGCTCC...CCCAAGTTTGGTGAGAGAGGAGAGGGGACAGTGGACTCTGTCAGCCCCAGCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR GCA 90 bp | TCGCTTTATCCAGGAGGCTTCACTGGTACTCCCCTAGGCAAGGAGGCCACAGGGCAGGAGGAAGACAGGTaGGACAGTCACATCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLYPGGFTGTPLGKEATGQEEDR*DSHIWV Trigger: GACCCAGATGTGACTGTCGCACCTGTCTTCCTCCTG...CCCTGTGGCCTCCTTGCCTAGGGGAGTACCAGTGAAGCCTCCTGGATAAAGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR CCA 90 bp | GGTGCTGGGGCTGACAGAGTCCACTGTCCCCTCTCCTCTCTCACCAAACTTGGGGGTTTGGCATGGTGCTaGAAGTGGCGGAAATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GAGADRVHCPLSSLTKLGGLAWC*KWRKFH Trigger: GTGGAATTTCCGCCACTTCCAGCACCATGCCAAACC...CCCAAGTTTGGTGAGAGAGGAGAGGGGACAGTGGACTCTGTCAGCCCCAGCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR GCA 90 bp | ATGACCCAGAGCACCCAGGGTGGAGAGGAACTCCTTACATTCCATCCCAGCTCCAGTCCGTCCACTGCATaGACACCAGCATGTACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MTQSTQGGEELLTFHPSSSPSTA*TPACTP Trigger: TGGCGTACATGCTGGTGTGCATGCAGTGGACGGACT...GGAGCTGGGATGGAATGTAAGGAGTTCCTCTCCACCCTGGGTGCTCTGGGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR CCA 90 bp | GAGAAAGCAAAGGGCTTGTCTCAGAGAACAAAACAGTTTAGCCCAGAGGCATGGTCCTCCGCACCGTGGTaGCCGATGAGGCGGCTACCC | + |
|
Preference number: 4 (lower is better) Translates to: EKAKGLSQRTKQFSPEAWSSAPW*PMRRLP Trigger: GGGTAGCCGCCTCATCGGCCACCACGGTGCGGAGGA...CCATGCCTCTGGGCTAAACTGTTTTGTTCTCTGAGACAAGCCCTTTGCTTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR CCA 90 bp | TCAATCTTGCCCAGTGACTCGGTGACTGCTGGAGTCTGGACCCTTACCCCTTCAACTGGGCCTGAGAGATaGCCAGGATCAGGGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SILPSDSVTAGVWTLTPSTGPER*PGSGQQ Trigger: TTGCTGCCCTGATCCTGGCCATCTCTCAGGCCCAGT...TGAAGGGGTAAGGGTCCAGACTCCAGCAGTCACCGAGTCACTGGGCAAGATTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR CCA 90 bp | GGTGCTGGGGCTGACAGAGTCCACTGTCCCCTCTCCTCTCTCACCAAACTTGGGATCTCCTTGGGGATGTaGTTCATCTGCGTGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GAGADRVHCPLSSLTKLGISLGM*FICVIH Trigger: GTGGATCACGCAGATGAACCACATCCCCAAGGAGAT...CCCAAGTTTGGTGAGAGAGGAGAGGGGACAGTGGACTCTGTCAGCCCCAGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR CCA 90 bp | TCGCTTTATCCAGGAGGCTTCACTGGTACTCCCCTAGGCAAGGAGGCCACAGGGCATGGCCAATCTCCTTaGGGATGTGGTTCATCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SLYPGGFTGTPLGKEATGHGQSP*GCGSSA Trigger: CGCAGATGAACCACATCCCCAAGGAGATTGGCCATG...CCCTGTGGCCTCCTTGCCTAGGGGAGTACCAGTGAAGCCTCCTGGATAAAGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR TCA 90 bp | AGCTGTTGCCTCCATGACCCAGAGCACCCAGGGTGGAGAGGAACTCCTTACATTCAAAGTTCACCAAGGTaGGCAGCGGAGGGCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: SCCLHDPEHPGWRGTPYIQSSPR*AAEGQS Trigger: TGATTGGCCCTCCGCTGCTCACCTTGGTGAACTTTG...AATGTAAGGAGTTCCTCTCCACCCTGGGTGCTCTGGGTCATGGAGGCAACAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR CCA 90 bp | CCATCCCAGCTCCACAATGATGGCCCTTCCACCAAGTCTGAAGCAGATTTGGCTCCCATCACGAACTGCTaGGCCACATGGTTCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSQLHNDGPSTKSEADLAPITNC*ATWFHL Trigger: CAGGTGGAACCATGTGGCCCAGCAGTTCGTGATGGG...AGCCAAATCTGCTTCAGACTTGGTGGAAGGGCCATCATTGTGGAGCTGGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR GCA 90 bp | TCAATCTTGCCCAGTGACTCGGTGACTGCTGGAGTCTGGACCCTTACCCCTTCAAGCAAGTCCGTCCACTaGATGCACACCAGCATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SILPSDSVTAGVWTLTPSSKSVH*MHTSMY Trigger: GTACATGCTGGTGTGCATGCAGTGGACGGACTTGCT...TGAAGGGGTAAGGGTCCAGACTCCAGCAGTCACCGAGTCACTGGGCAAGATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR GCA 90 bp | TCAATCTTGCCCAGTGACTCGGTGACTGCTGGAGTCTGGACCCTTACCCCTTCAGGGATGTGGTTCATCTaGGTGATCCACACGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SILPSDSVTAGVWTLTPSGMWFI*VIHTNQ Trigger: CTGGTTCGTGTGGATCACGCAGATGAACCACATCCC...TGAAGGGGTAAGGGTCCAGACTCCAGCAGTCACCGAGTCACTGGGCAAGATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR TCA 90 bp | GGGCTTAGAAGTAGCTTTCAAGGGATCTTCAGCCCTTACCCCTTCACCACCCATTATCCACCAGAGCGGTaGGGAAAGGCTTCACCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GLRSSFQGIFSPYPFTTHYPPER*GKASPR Trigger: ACGAGGTGAAGCCTTTCCTCACCGCTCTGGTGGATA...ATGGGTGGTGAAGGGGTAAGGGCTGAAGATCCCTTGAAAGCTACTTCTAAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237226.2 |
||
| CDS-3UTR GCA 90 bp | TTGATAGTGCAGTCAACTGTCAACTGTACCCATTGTCCAGATGAAGATCCTGAGCCCTGGGTGCCGCTGTaGCCAGCGGCTGATGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: LIVQSTVNCTHCPDEDPEPWVPL*PAADVV Trigger: TACGACATCAGCCGCTGGGCACAGCGGCACCCAGGG...CTCAGGATCTTCATCTGGACAATGGGTACAGTTGACAGTTGACTGCACTATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR GCA 90 bp | AGCTTTCAAGGGATCTTCAGCCCTTACCCCTTCACCACCCATAAGGGTGCTGCCTCATTGATGGAGGTATaGATCCAGCCAGATGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SFQGIFSPYPFTTHKGAASLMEV*IQPDVA Trigger: GGCGACATCTGGCTGGATGCATACCTCCATCAATGA...GGCAGCACCCTTATGGGTGGTGAAGGGGTAAGGGCTGAAGATCCCTTGAAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237226.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAAGCAAAGGGCTTGTCTCAGAGAACAAAACAGTTTAGCCCAGAGGCATGGTCTTGGTGGAAGGCGTaGAAGGCATCCGTGGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EKAKGLSQRTKQFSPEAWSWWKA*KASVAS Trigger: GGACGCCACGGATGCCTTCCACGCCTTCCACCAAGA...CCATGCCTCTGGGCTAAACTGTTTTGTTCTCTGAGACAAGCCCTTTGCTTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR TCA 90 bp | CATGACCCAGAGCACCCAGGGTGGAGAGGAACTCCTTACATTCCATCCCAGCTCGTGAAGATGGAAGCATaGCCTAGATCATGTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HDPEHPGWRGTPYIPSQLVKMEA*PRSCCR Trigger: TCTGCAACATGATCTAGGTCATGCTTCCATCTTCAC...GAGCTGGGATGGAATGTAAGGAGTTCCTCTCCACCCTGGGTGCTCTGGGTCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR TCA 90 bp | GAGAAAGCAAAGGGCTTGTCTCAGAGAACAAAACAGTTTAGCCCAGAGGCATGGTATCCACCAGAGCGGTaGGGAAAGGCTTCACCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: EKAKGLSQRTKQFSPEAWYPPER*GKASPR Trigger: ACGAGGTGAAGCCTTTCCTCACCGCTCTGGTGGATA...CCATGCCTCTGGGCTAAACTGTTTTGTTCTCTGAGACAAGCCCTTTGCTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR CCA 90 bp | TCTCAGAGAACAAAACAGTTTAGCCCAGAGGCATGGGGTCATACGCATAAAGCTAGCGGGAGTAGAAACTaGCAGCCCACAGCAAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SQRTKQFSPEAWGHTHKASGSRN*QPTASP Trigger: CGGACTTGCTGTGGGCTGCCAGTTTCTACTCCCGCT...AGCTTTATGCGTATGACCCCATGCCTCTGGGCTAAACTGTTTTGTTCTCTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| 3UTR CAA 72 bp | AGGGAAGGGGTGCCTTCCCAGATTGCAGTGCTTAGCTaGAAGGGAGCATCCTTAACACTTTGGGGAGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: REGVPSQIAVLS*KGASLTLWGEN Trigger: ATTCTCTCCCCAAAGTGTTAAGGATGCTCCCTTCAAGCTAAGCACTGCAATCTGGGAAGGCACCCCTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR CCA 90 bp | CTACAAGTATATATAACAGGGCTTAGAAGTAGCTTTCAAGGGATCTTCAGCCCTGGGCAGCAAGGATACTaGACACCCAGCCAGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQVYITGLRSSFQGIFSPGQQGY*TPSQGP Trigger: TGGGCCCTGGCTGGGTGTCCAGTATCCTTGCTGCCC...AGGGCTGAAGATCCCTTGAAAGCTACTTCTAAGCCCTGTTATATATACTTGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR CCA 90 bp | CCATCCCAGCTCCACAATGATGGCCCTTCCACCAAGTCTGAAGCAGATTTGGCTTGCGACAGTCACATCTaGGTCTTTGTGGAAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSQLHNDGPSTKSEADLACDSHI*VFVEDV Trigger: AACATCTTCCACAAAGACCCAGATGTGACTGTCGCA...AGCCAAATCTGCTTCAGACTTGGTGGAAGGGCCATCATTGTGGAGCTGGGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| 3UTR CAA 72 bp | TGTCATTTTAAGTATGTTCCCTCCACCCTGGTCCTGTaGGACATGTGCCATGGCCATAGGATTGCTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: CHFKYVPSTLVL*DMCHGHRIADQ Trigger: CTGGTCAGCAATCCTATGGCCATGGCACATGTCCAACAGGACCAGGGTGGAGGGAACATACTTAAAATGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR CCA 90 bp | GACTTCCTACTGAGTTACATCCCCAGACCCTTAAAATATTTATTATCATCTCAAGCGTCCTCCGCACCGTaGTGGCCGATGAGGCGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: DFLLSYIPRPLKYLLSSQASSAP*WPMRRL Trigger: TAGCCGCCTCATCGGCCACCACGGTGCGGAGGACGC...TTGAGATGATAATAAATATTTTAAGGGTCTGGGGATGTAACTCAGTAGGAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR CCA 90 bp | TTGATAGTGCAGTCAACTGTCAACTGTACCCATTGTCCAGATGAAGATCCTGAGATCCACACGAACCAGTaGCTCTCCAGCACCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LIVQSTVNCTHCPDEDPEIHTNQ*LSSTLT Trigger: TGTCAGGGTGCTGGAGAGCCACTGGTTCGTGTGGAT...CTCAGGATCTTCATCTGGACAATGGGTACAGTTGACAGTTGACTGCACTATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR GCA 90 bp | TTGATAGTGCAGTCAACTGTCAACTGTACCCATTGTCCAGATGAAGATCCTGAGGTGGCCCAGCAGGAGTaGAAAGAAAGTGGTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIVQSTVNCTHCPDEDPEVAQQE*KESGIS Trigger: GCTGATACCACTTTCTTTGCACTCCTGCTGGGCCAC...CTCAGGATCTTCATCTGGACAATGGGTACAGTTGACAGTTGACTGCACTATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR GCA 90 bp | CTACAAGTATATATAACAGGGCTTAGAAGTAGCTTTCAAGGGATCTTCAGCCCTTGCCCCATCACGAACTaGTGGGCCACATGGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQVYITGLRSSFQGIFSPCPITN*WATWFH Trigger: GTGGAACCATGTGGCCCAGCAGTTCGTGATGGGGCA...AGGGCTGAAGATCCCTTGAAAGCTACTTCTAAGCCCTGTTATATATACTTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR GCA 90 bp | TTGATAGTGCAGTCAACTGTCAACTGTACCCATTGTCCAGATGAAGATCCTGAGTTGGGTTTGGCATGGTaGTGGAAGTGGCGGAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: LIVQSTVNCTHCPDEDPELGLAW*WKWRKF Trigger: GAATTTCCGCCACTTCCAGCACCATGCCAAACCCAA...CTCAGGATCTTCATCTGGACAATGGGTACAGTTGACAGTTGACTGCACTATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR GCA 90 bp | TTGTCTCAGAGAACAAAACAGTTTAGCCCAGAGGCATGGGGTCATACGCATAAATCATTGATGGAGGTATaGATCCAGCCAGATGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSQRTKQFSPEAWGHTHKSLMEV*IQPDVA Trigger: GGCGACATCTGGCTGGATGCATACCTCCATCAATGA...TTTATGCGTATGACCCCATGCCTCTGGGCTAAACTGTTTTGTTCTCTGAGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR CCA 90 bp | TTGATAGTGCAGTCAACTGTCAACTGTACCCATTGTCCAGATGAAGATCCTGAGAAATGGAGATCTTGGTaGAAGGCGTGGAAGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LIVQSTVNCTHCPDEDPEKWRSW*KAWKAS Trigger: GGATGCCTTCCACGCCTTCCACCAAGATCTCCATTT...CTCAGGATCTTCATCTGGACAATGGGTACAGTTGACAGTTGACTGCACTATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| 3UTR CAA 72 bp | CACAATGATGGCCCTTCCACCAAGTCTGAAGCAGATTaGGCTCCAAAATTCATGAAAGTCCAACACTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HNDGPSTKSEAD*APKFMKVQHLA Trigger: AGCCAAGTGTTGGACTTTCATGAATTTTGGAGCCAAATCTGCTTCAGACTTGGTGGAAGGGCCATCATTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR GCA 90 bp | GACTTCCTACTGAGTTACATCCCCAGACCCTTAAAATATTTATTATCATCTCAACACATTGCAGGTGGCTaGCAGCTGAGAGCTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DFLLSYIPRPLKYLLSSQHIAGG*QLRACP Trigger: TGGGCAAGCTCTCAGCTGGCAGCCACCTGCAATGTG...TTGAGATGATAATAAATATTTTAAGGGTCTGGGGATGTAACTCAGTAGGAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR GCA 90 bp | GACTTCCTACTGAGTTACATCCCCAGACCCTTAAAATATTTATTATCATCTCAAGCGAAGGTTCCACATTaGAGGTGGCTGCCAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DFLLSYIPRPLKYLLSSQAKVPH*RWLPAE Trigger: CTCAGCTGGCAGCCACCTGCAATGTGGAACCTTCGC...TTGAGATGATAATAAATATTTTAAGGGTCTGGGGATGTAACTCAGTAGGAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR CCA 90 bp | TCTCAGAGAACAAAACAGTTTAGCCCAGAGGCATGGGGTCATACGCATAAAGCTGGAGTGCAAAGAAAGTaGTATCAGCTTCAAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQRTKQFSPEAWGHTHKAGVQRK*YQLQTA Trigger: AGCTGTTTGAAGCTGATACCACTTTCTTTGCACTCC...AGCTTTATGCGTATGACCCCATGCCTCTGGGCTAAACTGTTTTGTTCTCTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR CCA 90 bp | CTACAAGTATATATAACAGGGCTTAGAAGTAGCTTTCAAGGGATCTTCAGCCCTACAAAATGGAGATCTTaGTGGAAGGCGTGGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQVYITGLRSSFQGIFSPTKWRS*WKAWKA Trigger: TGCCTTCCACGCCTTCCACCAAGATCTCCATTTTGT...AGGGCTGAAGATCCCTTGAAAGCTACTTCTAAGCCCTGTTATATATACTTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR CCA 90 bp | CTACAAGTATATATAACAGGGCTTAGAAGTAGCTTTCAAGGGATCTTCAGCCCTAACTTGCGCACAAAATaGAGATCTTGGTGGAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LQVYITGLRSSFQGIFSPNLRTK*RSWWKA Trigger: CGCCTTCCACCAAGATCTCCATTTTGTGCGCAAGTT...AGGGCTGAAGATCCCTTGAAAGCTACTTCTAAGCCCTGTTATATATACTTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR CCA 90 bp | GACTTCCTACTGAGTTACATCCCCAGACCCTTAAAATATTTATTATCATCTCAAGTTCCACATTGCAGGTaGCTGCCAGCTGAGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DFLLSYIPRPLKYLLSSQVPHCR*LPAESL Trigger: CAAGCTCTCAGCTGGCAGCCACCTGCAATGTGGAAC...TTGAGATGATAATAAATATTTTAAGGGTCTGGGGATGTAACTCAGTAGGAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
||
| CDS-3UTR GCA 90 bp | GCGTTGAAAGCGACACTTTGGATTTACTTTGGATTTAAGAGCTTGAATTCCTTCGGGGTTTCAGGAACTTaGGCACAAAATGGAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALKATLWIYFGFKSLNSFGVSGT*AQNGDL Trigger: AAGATCTCCATTTTGTGCGCAAGTTCCTGAAACCCC...GAAGGAATTCAAGCTCTTAAATCCAAAGTAAATCCAAAGTGTCGCTTTCAACGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR CAA 72 bp | TTATATTTAAAGGACTTAGGGACAGAATGGCCACACTaGAGTCACTGCATATTCAGCACAACTGTTATGCAA | + |
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Preference number: 4 (lower is better) Translates to: LYLKDLGTEWPH*SHCIFSTTVMQ Trigger: TTGCATAACAGTTGTGCTGAATATGCAGTGACTCAAGTGTGGCCATTCTGTCCCTAAGTCCTTTAAATATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| 3UTR CAA 72 bp | AGCCTTTCTAGGGCATCCTTTTTATTTCTCATCGCGTaGAAAGCGACACTTTGGATTTACTTTGGATTTAAG | + |
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Preference number: 4 (lower is better) Translates to: SLSRASFLFLIA*KATLWIYFGFK Trigger: CTTAAATCCAAAGTAAATCCAAAGTGTCGCTTTCAACGCGATGAGAAATAAAAAGGATGCCCTAGAAAGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| CDS-3UTR GCA 90 bp | GACTTCCTACTGAGTTACATCCCCAGACCCTTAAAATATTTATTATCATCTCAAATCTGCGTTTCTTCTTaGCATACTCCACAGATGACT | + |
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Preference number: 4 (lower is better) Translates to: DFLLSYIPRPLKYLLSSQICVSS*HTPQMT Trigger: AGTCATCTGTGGAGTATGGCAAGAAGAAACGCAGAT...TTGAGATGATAATAAATATTTTAAGGGTCTGGGGATGTAACTCAGTAGGAAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| CDS CCA 90 bp | CGTGGCGTCCTCCGCACCGTGGTGGCCGATGAGGCGGCTACCCCCTaGGTGCCGCTGTGCCCAGCGGCTGATGTCGTAGACACGGCGCTC | + |
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Preference number: 5 (lower is better) Translates to: RGVLRTVVADEAATP*VPLCPAADVVDTAL Trigger: GAGCGCCGTGTCTACGACATCAGCCGCTGGGCACAGCGGCACCCAGGGGGTAGCCGCCTCATCGGCCACCACGGTGCGGAGGACGCCACG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115995.4 ENSMUST00000237672.2 |
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| CDS-3UTR CAA 90 bp | AGCTGTTGCCTCCATGACCCAGAGCACCCAGGGTGGAGAGGAACTCCTTACATTTCGATGACCAGCCACTaGTCGCCTGGTAGGTCATGC | + |
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Preference number: 5 (lower is better) Translates to: SCCLHDPEHPGWRGTPYISMTSH*SPGRSC Trigger: GCATGACCTACCAGGCGACAAGTGGCTGGTCATCGA...AATGTAAGGAGTTCCTCTCCACCCTGGGTGCTCTGGGTCATGGAGGCAACAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| CDS-3UTR CAA 90 bp | GTACCCAGACGCGATGGGACCTCTCCTTCCCTCGCTTTATCCAGGAGGCTTCACTCATGGCCAATCTCCTaGGGGATGTGGTTCATCTGC | + |
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Preference number: 5 (lower is better) Translates to: VPRRDGTSPSLALSRRLHSWPIS*GMWFIC Trigger: GCAGATGAACCACATCCCCAAGGAGATTGGCCATGA...GTGAAGCCTCCTGGATAAAGCGAGGGAAGGAGAGGTCCCATCGCGTCTGGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| CDS GCA 90 bp | TTCCACCAGTGGGCGGAAAAGCCTTTCAACTGCCCCATCACGAACTaGTGGGCCACATGGTTCCACCTGGACTTAGTGAAGATGGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: FHQWAEKPFNCPITN*WATWFHLDLVKMEA Trigger: TGCTTCCATCTTCACTAAGTCCAGGTGGAACCATGTGGCCCAGCAGTTCGTGATGGGGCAGTTGAAAGGCTTTTCCGCCCACTGGTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115995.4 ENSMUST00000237672.2 |
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| CDS CCA 90 bp | CACCATAGAAGGGAGAGTAGGACAAGAAAAAGCGGGAGTAGAAACTaGCAGCCCACAGCAAGTCCGTCCACTGCATGCACACCAGCATGT | + |
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Preference number: 5 (lower is better) Translates to: HHRRESRTRKSGSRN*QPTASPSTACTPAC Trigger: ACATGCTGGTGTGCATGCAGTGGACGGACTTGCTGTGGGCTGCCAGTTTCTACTCCCGCTTTTTCTTGTCCTACTCTCCCTTCTATGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115995.4 ENSMUST00000237672.2 |
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| CDS-3UTR CAA 90 bp | CCATCCCAGCTCCACAATGATGGCCCTTCCACCAAGTCTGAAGCAGATTTGGCTCACAAAATGGAGATCTaGGTGGAAGGCGTGGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: PSQLHNDGPSTKSEADLAHKMEI*VEGVEG Trigger: GCCTTCCACGCCTTCCACCAAGATCTCCATTTTGTG...AGCCAAATCTGCTTCAGACTTGGTGGAAGGGCCATCATTGTGGAGCTGGGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| CDS-3UTR CAA 90 bp | CTGAATGGAACAGAGCAAGGGAGGTACCCAGACGCGATGGGACCTCTCCTTCCCTATCTGCGTTTCTTCTaGCCATACTCCACAGATGAC | + |
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Preference number: 5 (lower is better) Translates to: LNGTEQGRYPDAMGPLLPYLRFF*PYSTDD Trigger: GTCATCTGTGGAGTATGGCAAGAAGAAACGCAGATA...GGGAAGGAGAGGTCCCATCGCGTCTGGGTACCTCCCTTGCTCTGTTCCATTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| CDS GCA 90 bp | AGCGGGAGTAGAAACTGGCAGCCCACAGCAAGTCCGTCCACTGCATaGACACCAGCATGTACGCCAGATTTTCAACTTCAAAGTTCACCA | + |
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Preference number: 5 (lower is better) Translates to: SGSRNWQPTASPSTA*TPACTPDFQLQSSP Trigger: TGGTGAACTTTGAAGTTGAAAATCTGGCGTACATGCTGGTGTGCATGCAGTGGACGGACTTGCTGTGGGCTGCCAGTTTCTACTCCCGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115995.4 ENSMUST00000237672.2 |
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| CDS-3UTR CAA 90 bp | TTGTCTCAGAGAACAAAACAGTTTAGCCCAGAGGCATGGGGTCATACGCATAAAAGGGGTTTCAGGAACTaGCGCACAAAATGGAGATCT | + |
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Preference number: 5 (lower is better) Translates to: LSQRTKQFSPEAWGHTHKRGFRN*RTKWRS Trigger: AGATCTCCATTTTGTGCGCAAGTTCCTGAAACCCCT...TTTATGCGTATGACCCCATGCCTCTGGGCTAAACTGTTTTGTTCTCTGAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| CDS TCA 72 bp | AGGCATCCGTGGCGTCCTCCGCACCGTGGTGGCCGATaGGGCGGCTACCCCCTGGGTGCCGCTGTGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RHPWRPPHRGGR*GGYPLGAAVPS Trigger: GCTGGGCACAGCGGCACCCAGGGGGTAGCCGCCTCATCGGCCACCACGGTGCGGAGGACGCCACGGATGCCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115995.4 ENSMUST00000237672.2 |
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| CDS CCA 72 bp | CTCCGCACCGTGGTGGCCGATGAGGCGGCTACCCCCTaGGTGCCGCTGTGCCCAGCGGCTGATGTCGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: LRTVVADEAATP*VPLCPAADVVD Trigger: GTCTACGACATCAGCCGCTGGGCACAGCGGCACCCAGGGGGTAGCCGCCTCATCGGCCACCACGGTGCGGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115995.4 ENSMUST00000237672.2 |
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| CDS GCA 72 bp | AGCCACTTGTCGCCTGGTAGGTCATGCTGGCGGATCTaGTCCCAGCGGAAGATGGGTAGGGGCGCCCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SHLSPGRSCWRI*SQRKMGRGAPS Trigger: GCTGGGGGCGCCCCTACCCATCTTCCGCTGGGAGCAGATCCGCCAGCATGACCTACCAGGCGACAAGTGGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115995.4 ENSMUST00000237672.2 |
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| CDS CCA 72 bp | CCTCGATCAGCTGGGCATTCTGAGCTCCATCCTGGCTaGGTTCCTCTGGGGCTAGCTCTCCAATCAACAGGG | + |
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Preference number: 6 (lower is better) Translates to: PRSAGHSELHPG*VPLGLALQSTG Trigger: CCCTGTTGATTGGAGAGCTAGCCCCAGAGGAACCCAGCCAGGATGGAGCTCAGAATGCCCAGCTGATCGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| CDS TCA 72 bp | AAGAGCGAAGGTTCCACATTGCAGGTGGCTGCCAGCTaGGAGCTTGCCCAGTCCCGATGCTTTTCATGGCCA | + |
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Preference number: 6 (lower is better) Translates to: KSEGSTLQVAAS*ELAQSRCFSWP Trigger: TGGCCATGAAAAGCATCGGGACTGGGCAAGCTCTCAGCTGGCAGCCACCTGCAATGTGGAACCTTCGCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115995.4 ENSMUST00000237672.2 |
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| CDS GCA 72 bp | TGGGCGGAAAAGCCTTTCAACTGCCCCATCACGAACTaGTGGGCCACATGGTTCCACCTGGACTTAGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: WAEKPFNCPITN*WATWFHLDLVK Trigger: CTTCACTAAGTCCAGGTGGAACCATGTGGCCCAGCAGTTCGTGATGGGGCAGTTGAAAGGCTTTTCCGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115995.4 ENSMUST00000237672.2 |
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| CDS CCA 72 bp | GCGGAAAAGCCTTTCAACTGCCCCATCACGAACTGCTaGGCCACATGGTTCCACCTGGACTTAGTGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: AEKPFNCPITNC*ATWFHLDLVKM Trigger: CATCTTCACTAAGTCCAGGTGGAACCATGTGGCCCAGCAGTTCGTGATGGGGCAGTTGAAAGGCTTTTCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115995.4 ENSMUST00000237672.2 |
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| CDS TCA 72 bp | ACATGGTTCCACCTGGACTTAGTGAAGATGGAAGCATaGCCTAGATCATGTTGCAGACACCAGCACTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: TWFHLDLVKMEA*PRSCCRHQHWA Trigger: GGCCCAGTGCTGGTGTCTGCAACATGATCTAGGTCATGCTTCCATCTTCACTAAGTCCAGGTGGAACCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115995.4 |
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| CDS GCA 72 bp | AGAAACTGGCAGCCCACAGCAAGTCCGTCCACTGCATaGACACCAGCATGTACGCCAGATTTTCAACTTCAA | + |
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Preference number: 6 (lower is better) Translates to: RNWQPTASPSTA*TPACTPDFQLQ Trigger: TTGAAGTTGAAAATCTGGCGTACATGCTGGTGTGCATGCAGTGGACGGACTTGCTGTGGGCTGCCAGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115995.4 ENSMUST00000237672.2 |
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| CDS TCA 72 bp | ACATGGTTCCACCTGGACTTAGTGAAGATGGAAGCATaGCCTAGATCATGTTGCAGACACCAGCACTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: TWFHLDLVKMEA*PRSCCRHQHWA Trigger: TGCCCAGTGCTGGTGTCTGCAACATGATCTAGGTCATGCTTCCATCTTCACTAAGTCCAGGTGGAACCATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237672.2 |
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