Pregenerated sensors for FADS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010663Ensembl transcript IDs: ENSMUST00000010807.6, ENSMUST00000235160.2, ENSMUST00000235515.2, ENSMUST00000237861.2
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGATGTGAAGCAGGTAGACCAGGAAGAAGAGGTGGTTGGCCTTCATaGGGCCCATTCGCTCTACTGTGGCCCGCAGCTCCCGGAATTCAT | + |
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Preference number: 1 (lower is better) Translates to: GCEAGRPGRRGGWPS*GPFALLWPAAPGIH Trigger: ATGAATTCCGGGAGCTGCGGGCCACAGTAGAGCGAATGGGCCTCATGAAGGCCAACCACCTCTTCTTCCTGGTCTACCTGCTTCACATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235515.2 |
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| 3UTR GCA 90 bp | TTCCAGGGCCAAATGCCTCCCAAACCACAGTCCTGGCCTTTGTCCTaGCTGCTTCTGAAACTGAAAAACAGCTTCTCCCAGCAGCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: FQGQMPPKPQSWPLS*LLLKLKNSFSQQPE Trigger: CTCTGGCTGCTGGGAGAAGCTGTTTTTCAGTTTCAGAAGCAGGCAGGACAAAGGCCAGGACTGTGGTTTGGGAGGCATTTGGCCCTGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR CCA 90 bp | AGGCTGAGAAGAGAAGGCCACAGTGGTTCAGATGCTCTGAAGACCTaGTCTTGGTACAACAGAGCTCACTGGTATTTGCCCAGACTGGCA | + |
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Preference number: 1 (lower is better) Translates to: RLRREGHSGSDALKT*SWYNRAHWYLPRLA Trigger: TGCCAGTCTGGGCAAATACCAGTGAGCTCTGTTGTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCCTTCTCTTCTCAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR CCA 90 bp | AATGTCCCCCGTGTCACAGTGAAGGCTGAGAAGAGAAGGCCACAGTaGTTCAGATGCTCTGAAGACCTGGTCTTGGTACAACAGAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: NVPRVTVKAEKRRPQ*FRCSEDLVLVQQSS Trigger: TGAGCTCTGTTGTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCCTTCTCTTCTCAGCCTTCACTGTGACACGGGGGACATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR GCA 90 bp | GGTGGCCAATCACAAAATGATGTAGCAGGTGATTCCATGTCGAGGTaGCAAAGACTGACAGGTGCCCAAAGTCATGCTGTAGCCAACCTG | + |
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Preference number: 1 (lower is better) Translates to: GGQSQNDVAGDSMSR*QRLTGAQSHAVANL Trigger: CAGGTTGGCTACAGCATGACTTTGGGCACCTGTCAGTCTTTGGCACCTCGACATGGAATCACCTGCTACATCATTTTGTGATTGGCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235515.2 |
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| 3UTR TCA 90 bp | TCTCTTCCCAGACAGGTGGGTCATCATGCTTCCAGTAGAATCTCTTaGGCAGACAACAATGCCCAGGGGTTTGGGGAACAAGAGCATGAA | + |
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Preference number: 1 (lower is better) Translates to: SLPRQVGHHASSRIS*ADNNAQGFGEQEHE Trigger: TTCATGCTCTTGTTCCCCAAACCCCTGGGCATTGTTGTCTGCTCAAGAGATTCTACTGGAAGCATGATGACCCACCTGTCTGGGAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR GCA 90 bp | CGTGTCACAGTGAAGGCTGAGAAGAGAAGGCCACAGTGGTTCAGATaGTCTGAAGACCTGGTCTTGGTACAACAGAGCTCACTGGTATTT | + |
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Preference number: 1 (lower is better) Translates to: RVTVKAEKRRPQWFR*SEDLVLVQQSSLVF Trigger: AAATACCAGTGAGCTCTGTTGTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCCTTCTCTTCTCAGCCTTCACTGTGACACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR CCA 90 bp | AGAAGAGAAGGCCACAGTGGTTCAGATGCTCTGAAGACCTGGTCTTaGTACAACAGAGCTCACTGGTATTTGCCCAGACTGGCAGTTGAA | + |
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Preference number: 1 (lower is better) Translates to: RREGHSGSDALKTWS*YNRAHWYLPRLAVE Trigger: TTCAACTGCCAGTCTGGGCAAATACCAGTGAGCTCTGTTGTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCCTTCTCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR TCA 90 bp | TGTCAAGAGCTAAGATCTAATGTTCTCTCTGGAACCTGGATGGAATaGGACCCAAGAATTGCGTGTGCCAGGACCTTCCAGGGCCAAATG | + |
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Preference number: 1 (lower is better) Translates to: CQELRSNVLSGTWME*DPRIACARTFQGQM Trigger: CATTTGGCCCTGGAAGGTCCTGGCACACGCAATTCTTGGGTCTCATTCCATCCAGGTTCCAGAGAGAACATTAGATCTTAGCTCTTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR TCA 90 bp | GCCTGTCTCTACACCAGACTCCAACATCCCTTAACACCCTCATCTTaGCCACAAACACGCACTGCACTTTGCCTTCTTGAGGTTTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: ACLYTRLQHPLTPSS*PQTRTALCLLEVFS Trigger: AGAGAAAACCTCAAGAAGGCAAAGTGCAGTGCGTGTTTGTGGTCAAGATGAGGGTGTTAAGGGATGTTGGAGTCTGGTGTAGAGACAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR TCA 90 bp | TCTGTCAGTGGATTTGAGATGCCTCACTTTACCTCTGTAACATTCTaGGGCTTGTCACTCAATGTCCCCCGTGTCACAGTGAAGGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: SVSGFEMPHFTSVTF*GLSLNVPRVTVKAE Trigger: CTCAGCCTTCACTGTGACACGGGGGACATTGAGTGACAAGCCTCAGAATGTTACAGAGGTAAAGTGAGGCATCTCAAATCCACTGACAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR TCA 90 bp | AAGACACTTGAACGAGTAGACAGAGGAGCTGCCTCGCTGCAGCAGTaGTGTTCACAGACCTTAGTGTTTCTAACCTTCCTGTTTGTGACA | + |
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Preference number: 1 (lower is better) Translates to: KTLERVDRGAASLQQ*CSQTLVFLTFLFVT Trigger: TGTCACAAACAGGAAGGTTAGAAACACTAAGGTCTGTGAACATCACTGCTGCAGCGAGGCAGCTCCTCTGTCTACTCGTTCAAGTGTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR GCA 90 bp | TTTCAAACAGGTTTTCAATCAGGGCCAACCACTGGCAAAGATCTGTaGTTTTCTGCAACCTGCCTGTCTCTACACCAGACTCCAACATCC | + |
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Preference number: 1 (lower is better) Translates to: FQTGFQSGPTTGKDL*FSATCLSLHQTPTS Trigger: GGATGTTGGAGTCTGGTGTAGAGACAGGCAGGTTGCAGAAAAGCACAGATCTTTGCCAGTGGTTGGCCCTGATTGAAAACCTGTTTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR CCA 90 bp | CCTACACAGTCTGTTTCAAACAGGTTTTCAATCAGGGCCAACCACTaGCAAAGATCTGTGCTTTTCTGCAACCTGCCTGTCTCTACACCA | + |
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Preference number: 1 (lower is better) Translates to: PTQSVSNRFSIRANH*QRSVLFCNLPVSTP Trigger: TGGTGTAGAGACAGGCAGGTTGCAGAAAAGCACAGATCTTTGCCAGTGGTTGGCCCTGATTGAAAACCTGTTTGAAACAGACTGTGTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR CCA 90 bp | ATTACAGGCTGGGGAGCAAAAGGAAACTATGGGAATAGTGTTCAGTaGGAGGGAAGACCTCACTCTTTGTTTATGTTCTTTCTCCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: ITGWGAKGNYGNSVQ*EGRPHSLFMFFLLG Trigger: CCCAAGGAGAAAGAACATAAACAAAGAGTGAGGTCTTCCCTCCCACTGAACACTATTCCCATAGTTTCCTTTTGCTCCCCAGCCTGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR CCA 90 bp | TCAGTGGGAGGGAAGACCTCACTCTTTGTTTATGTTCTTTCTCCTTaGGGACCGATTAGAAGAGATGAATCAACAGAGTTTCAAAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: SVGGKTSLFVYVLSP*GPIRRDESTEFQRP Trigger: TGGCCTTTGAAACTCTGTTGATTCATCTCTTCTAATCGGTCCCCAAGGAGAAAGAACATAAACAAAGAGTGAGGTCTTCCCTCCCACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR GCA 90 bp | ATTCTATGCATGAATGCCCTCTTTCTAAATCATGTTCGAAGGAGTTaGACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTCAGATA | + |
|
Preference number: 1 (lower is better) Translates to: ILCMNALFLNHVRRS*TVPQRLTRRVESQI Trigger: TATCTGACTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGATTTAGAAAGAGGGCATTCATGCATAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGAACGGGCACGGGGAGGGGTCTGCACCTATTCTGAAGAAGGAGCCATAAAGAGCAAGCTGTGCTCCTaGGCAGGGAGTTGTGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: RERARGGVCTYSEEGAIKSKLCS*AGSCAR Trigger: CCTGGCACAACTCCCTGCCCAGGAGCACAGCTTGCT...CTTTATGGCTCCTTCTTCAGAATAGGTGCAGACCCCTCCCCGTGCCCGTTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCTTCTTCTTTTCCCTCCCGAGCTCCACAGGAAGGACCTTCCCCAGGGCGAACCATTCGCTCTACTGTaGCCCGCAGCTCCCGGAATT | + |
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Preference number: 2 (lower is better) Translates to: VLLLFPPELHRKDLPQGEPFALL*PAAPGI Trigger: AATTCCGGGAGCTGCGGGCCACAGTAGAGCGAATGG...TTCGCCCTGGGGAAGGTCCTTCCTGTGGAGCTCGGGAGGGAAAAGAAGAAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235515.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGAACGGGCACGGGGAGGGGTCTGCACCTATTCTGAAGAAGGAGCCATAAAGCCCAAGAATTGCGTGTaGCAGGACCTTCCAGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: RERARGGVCTYSEEGAIKPKNCV*QDLPGP Trigger: TGGCCCTGGAAGGTCCTGGCACACGCAATTCTTGGG...CTTTATGGCTCCTTCTTCAGAATAGGTGCAGACCCCTCCCCGTGCCCGTTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCTTCTTCTTTTCCCTCCCGAGCTCCACAGGAAGGACCTTCCCCAGGGCGAAGGCTTGGCATGGTGCTaGAAATGCATGTGGTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: VLLLFPPELHRKDLPQGEGLAWC*KCMWFH Trigger: GTGGAACCACATGCATTTCCAGCACCATGCCAAGCC...TTCGCCCTGGGGAAGGTCCTTCCTGTGGAGCTCGGGAGGGAAAAGAAGAAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235515.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGCTTCTTCTTTTCCCTCCCGAGCTCCACAGGAAGGACCTTCCCCAGGGCGATGTACTGAGCAGTACTaGACAGAGGATGAAGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: CASSFPSRAPQEGPSPGRCTEQY*TEDEGH Trigger: GTGCCCTTCATCCTCTGTGCAGTACTGCTCAGTACA...TCGCCCTGGGGAAGGTCCTTCCTGTGGAGCTCGGGAGGGAAAAGAAGAAGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235515.2 |
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| 3UTR-3UTR TCA 90 bp | GGTTGTATGGCATGTGCTTCTTCTTTTCCCTCCCGAGCTCCACAGGAAGGACCTCGAGGTGCCAAAGACTaGCAGGTGCCCAAAGTCATG | + |
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Preference number: 2 (lower is better) Translates to: GCMACASSFPSRAPQEGPRGAKD*QVPKVM Trigger: CATGACTTTGGGCACCTGTCAGTCTTTGGCACCTCG...AGGTCCTTCCTGTGGAGCTCGGGAGGGAAAAGAAGAAGCACATGCCATACAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235515.2 |
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| 3UTR-3UTR GCA 90 bp | GTTAGACAGACTGGTAGTGCCACCTCCTTACCCCGGGTGGCAGGGAACGGGCACGGCCTCAGAATTCTATaGATGAATGCCCTCTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: VRQTGSATSLPRVAGNGHGLRIL*MNALFL Trigger: TAGAAAGAGGGCATTCATGCATAGAATTCTGAGGCC...GTGCCCGTTCCCTGCCACCCGGGGTAAGGAGGTGGCACTACCAGTCTGTCTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGAAGGCCACAGTGGTTCAGATGCTCTGAAGACCTGGTCTTGGTACAACAGACTCAGCAGCAAGCTGTaGTCCTGGGCAGGGAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: REGHSGSDALKTWSWYNRLSSKL*SWAGSC Trigger: ACAACTCCCTGCCCAGGAGCACAGCTTGCTGCTGAG...TCTGTTGTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCCTTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTGTATGGCATGTGCTTCTTCTTTTCCCTCCCGAGCTCCACAGGAAGGACCTGATTCCATGTCGAGGTaGCAAAGACTGACAGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: GCMACASSFPSRAPQEGPDSMSR*QRLTGA Trigger: GGCACCTGTCAGTCTTTGGCACCTCGACATGGAATC...AGGTCCTTCCTGTGGAGCTCGGGAGGGAAAAGAAGAAGCACATGCCATACAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235515.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAGAAGAGAAGGCCACAGTGGTTCAGATGCTCTGAAGACCTGGTCTTGGTACGCCCTGGCACTCTGGTaGAAGCCTCAGTCACTTTTG | + |
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Preference number: 2 (lower is better) Translates to: LRREGHSGSDALKTWSWYALALW*KPQSLL Trigger: CAAAAGTGACTGAGGCTTCCACCAGAGTGCCAGGGC...GTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCCTTCTCTTCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR CAA 90 bp | GGTCTTGGTACAACAGAGCTCACTGGTATTTGCCCAGACTGGCAGTaGAAGGTCAAAGCCAGTGAGTGGGTTAGACAGACTGGTAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: GLGTTELTGICPDWQ*KVKASEWVRQTGSA Trigger: GGCACTACCAGTCTGTCTAACCCACTCACTGGCTTTGACCTTCAACTGCCAGTCTGGGCAAATACCAGTGAGCTCTGTTGTACCAAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTCAGGTGGCCAATCACAAAATGATGTAGCAGGTGATTCCATGTCGAGGTGCCAAAGATCCAAAGGGTaGGCCAGGCAGCCACATCCA | + |
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Preference number: 2 (lower is better) Translates to: PSGGQSQNDVAGDSMSRCQRSKG*ARQPHP Trigger: TGGATGTGGCTGCCTGGCTCACCCTTTGGATCTTTG...GCACCTCGACATGGAATCACCTGCTACATCATTTTGTGATTGGCCACCTGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235515.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGAAGGCCACAGTGGTTCAGATGCTCTGAAGACCTGGTCTTGGTACAACAGAAGTAGACAGAGGAGCTaGCTCGCTGCAGCAGTGATG | + |
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Preference number: 2 (lower is better) Translates to: REGHSGSDALKTWSWYNRSRQRS*LAAAVM Trigger: CATCACTGCTGCAGCGAGGCAGCTCCTCTGTCTACT...TCTGTTGTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCCTTCTCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGAACCTGGATGGAATGAGACCCAAGAATTGCGTGTGCCAGGACCTTCCAGGACAGTTTTGAATTCCTaGTTCAACAGCTCTCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: LEPGWNETQELRVPGPSRTVLNS*FNSSPL Trigger: GAGGGGAGAGCTGTTGAAGCAGGAATTCAAAACTGT...CCTGGAAGGTCCTGGCACACGCAATTCTTGGGTCTCATTCCATCCAGGTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGGTCTCTCCGGGCATGTTCCTATATTCTCCGGAACATATCTTTTACCAACCCTCCAACTCCTGCTTTaGCTCCAGGTGTCCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: LGLSGHVPIFSGTYLLPTLQLLL*LQVSSS Trigger: GGAAGAGGACACCTGGAGCCAAAGCAGGAGTTGGAG...GGTTGGTAAAAGATATGTTCCGGAGAATATAGGAACATGCCCGGAGAGACCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCCAACATCCCTTAACACCCTCATCTTGACCACAAACACGCACTGCACTTTGTCCAGTAGAATCTCTTaGGCAGACAACAATGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: TPTSLNTLILTTNTHCTLSSRIS*ADNNAQ Trigger: CTGGGCATTGTTGTCTGCTCAAGAGATTCTACTGGA...CAAAGTGCAGTGCGTGTTTGTGGTCAAGATGAGGGTGTTAAGGGATGTTGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAGAAGGCCACAGTGGTTCAGATGCTCTGAAGACCTGGTCTTGGTACAACAGTTTGTCCCCCTCCCCTaGCAAAGTAGAAGAAATAAC | + |
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Preference number: 2 (lower is better) Translates to: KRRPQWFRCSEDLVLVQQFVPLP*QSRRNN Trigger: GTTATTTCTTCTACTTTGGCAGGGGAGGGGGACAAA...CTGTTGTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCCTTCTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAGAAGGCCACAGTGGTTCAGATGCTCTGAAGACCTGGTCTTGGTACAACAGACACGCACTGCACTTTaGCTTCTTGAGGTTTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: KRRPQWFRCSEDLVLVQQTRTAL*LLEVFS Trigger: AGAGAAAACCTCAAGAAGGCAAAGTGCAGTGCGTGT...CTGTTGTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCCTTCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAGGCCACAGTGGTTCAGATGCTCTGAAGACCTGGTCTTGGTACAACAGATCTCTGGAACCTGGATaGAATGAGACCCAAGAATTG | + |
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Preference number: 2 (lower is better) Translates to: REGHSGSDALKTWSWYNRSLEPG*NETQEL Trigger: CAATTCTTGGGTCTCATTCCATCCAGGTTCCAGAGA...TCTGTTGTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCCTTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR-3UTR CCA 90 bp | GGCATGTTCCTATATTCTCCGGAACATATCTTTTACCAACCAGAAGATTACAAAAGCAAGCTGTGCTCCTaGGCAGGGAGTTGTGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GMFLYSPEHIFYQPEDYKSKLCS*AGSCAR Trigger: CCTGGCACAACTCCCTGCCCAGGAGCACAGCTTGCT...TTTGTAATCTTCTGGTTGGTAAAAGATATGTTCCGGAGAATATAGGAACATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR CAA 90 bp | ATATCCATGTTCCCTAACCTTTTAAACATTAGATTCATAGTGGCATaGTCCCTCCAACTCCTGCTTTGGCTCCAGGTGTCCTCTTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: ISMFPNLLNIRFIVA*SLQLLLWLQVSSSS Trigger: GGAGGAAGAGGACACCTGGAGCCAAAGCAGGAGTTGGAGGGACAATGCCACTATGAATCTAATGTTTAAAAGGTTAGGGAACATGGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTGCAACCTGCCTGTCTCTACACCAGACTCCAACATCCCTTAACACCCTCTTCCTGTTTGTGACATaGAACTGTGCTATACAATGC | + |
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Preference number: 2 (lower is better) Translates to: FSATCLSLHQTPTSLNTLFLFVT*NCAIQC Trigger: GCATTGTATAGCACAGTTCCATGTCACAAACAGGAA...GAGGGTGTTAAGGGATGTTGGAGTCTGGTGTAGAGACAGGCAGGTTGCAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAGAAGATTACAAAACCCTATTTTATTGTTAGACCGGCACACTTTGTCAGAAGCCCTGGCACTCTGGTaGAAGCCTCAGTCACTTTTG | + |
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Preference number: 2 (lower is better) Translates to: TRRLQNPILLLDRHTLSEALALW*KPQSLL Trigger: CAAAAGTGACTGAGGCTTCCACCAGAGTGCCAGGGC...TTCTGACAAAGTGTGCCGGTCTAACAATAAAATAGGGTTTTGTAATCTTCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR-3UTR CCA 90 bp | TGCACCTATTCTGAAGAAGGAGCCATAAAGGCAGCACTCTTTAATCCTGATTTTCTCTTCCCAGACAGGTaGGTCATCATGCTTCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: CTYSEEGAIKAALFNPDFLFPDR*VIMLPV Trigger: TACTGGAAGCATGATGACCCACCTGTCTGGGAAGAG...AAAATCAGGATTAAAGAGTGCTGCCTTTATGGCTCCTTCTTCAGAATAGGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR CAA 90 bp | AATTCTATGCATGAATGCCCTCTTTCTAAATCATGTTCGAAGGAGTaGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: NSMHECPLSKSCSKE*HCSSETNKEGGESD Trigger: ATCTGACTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGATTTAGAAAGAGGGCATTCATGCATAGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR-3UTR TCA 90 bp | TGCACCTATTCTGAAGAAGGAGCCATAAAGGCAGCACTCTTTAATCCTGATTTTTGGGGAACAAGAGCATaGAAGTGGACATACAGGTTA | + |
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Preference number: 2 (lower is better) Translates to: CTYSEEGAIKAALFNPDFWGTRA*KWTYRL Trigger: TAACCTGTATGTCCACTTTCATGCTCTTGTTCCCCA...AAAATCAGGATTAAAGAGTGCTGCCTTTATGGCTCCTTCTTCAGAATAGGTGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR-3UTR GCA 90 bp | TGCACCTATTCTGAAGAAGGAGCCATAAAGGCAGCACTCTTTAATCCTGATTTTCATGTTCGAAGGAGTTaGACTGTTCCTCAGAGACTA | + |
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Preference number: 2 (lower is better) Translates to: CTYSEEGAIKAALFNPDFHVRRS*TVPQRL Trigger: TAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATG...AAAATCAGGATTAAAGAGTGCTGCCTTTATGGCTCCTTCTTCAGAATAGGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGGTCTCTCCGGGCATGTTCCTATATTCTCCGGAACATATCTTTTACCAACCCTTAGAATTACAGGCTaGGGAGCAAAAGGAAACTAT | + |
|
Preference number: 2 (lower is better) Translates to: LGLSGHVPIFSGTYLLPTLRITG*GAKGNY Trigger: ATAGTTTCCTTTTGCTCCCCAGCCTGTAATTCTAAG...GGTTGGTAAAAGATATGTTCCGGAGAATATAGGAACATGCCCGGAGAGACCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR TCA 72 bp | GCAGGTAGACCAGGAAGAAGAGGTGGTTGGCCTTCATaGGGCCCATTCGCTCTACTGTGGCCCGCAGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: AGRPGRRGGWPS*GPFALLWPAAP Trigger: GGGAGCTGCGGGCCACAGTAGAGCGAATGGGCCTCATGAAGGCCAACCACCTCTTCTTCCTGGTCTACCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235515.2 |
||
| 3UTR GCA 72 bp | CAAGAATTGCGTGTGCCAGGACCTTCCAGGGCCAAATaGCTCCCAAACCACAGTCCTGGCCTTTGTCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: QELRVPGPSRAK*LPNHSPGLCPA Trigger: GGCAGGACAAAGGCCAGGACTGTGGTTTGGGAGGCATTTGGCCCTGGAAGGTCCTGGCACACGCAATTCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR GCA 72 bp | TGGAACCTGGATGGAATGAGACCCAAGAATTGCGTGTaGCAGGACCTTCCAGGGCCAAATGCCTCCCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: WNLDGMRPKNCV*QDLPGPNASQT Trigger: GGTTTGGGAGGCATTTGGCCCTGGAAGGTCCTGGCACACGCAATTCTTGGGTCTCATTCCATCCAGGTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR GCA 72 bp | TCTCTCTGGAACCTGGATGGAATGAGACCCAAGAATTaGGTGTGCCAGGACCTTCCAGGGCCAAATGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SLWNLDGMRPKN*VCQDLPGPNAS Trigger: GGAGGCATTTGGCCCTGGAAGGTCCTGGCACACGCAATTCTTGGGTCTCATTCCATCCAGGTTCCAGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCTGCAACCTGCCTGTCTCTACACCAGACTCCAACATCCCTTAACACCCTCCCTCCAACTCCTGCTTaGGCTCCAGGTGTCCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FSATCLSLHQTPTSLNTLPPTPA*APGVLF Trigger: GAAGAGGACACCTGGAGCCAAAGCAGGAGTTGGAGG...GAGGGTGTTAAGGGATGTTGGAGTCTGGTGTAGAGACAGGCAGGTTGCAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGCTATACAATGCTGGAACGTGACATAGGGAACAGGGATTCTGAGTCTGCACTCCTGGGCAGGGAGTaGTGCCAGGCCTCAGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: LCYTMLERDIGNRDSESALLGRE*CQASEF Trigger: GAATTCTGAGGCCTGGCACAACTCCCTGCCCAGGAG...TGCAGACTCAGAATCCCTGTTCCCTATGTCACGTTCCAGCATTGTATAGCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTAGACAGACTGGTAGTGCCACCTCCTTACCCCGGGTGGCAGGGAACGGGCACCAAAACCCTATTTTATaGTTAGACCGGCACACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: VRQTGSATSLPRVAGNGHQNPIL*LDRHTL Trigger: CAAAGTGTGCCGGTCTAACAATAAAATAGGGTTTTG...GTGCCCGTTCCCTGCCACCCGGGGTAAGGAGGTGGCACTACCAGTCTGTCTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR GCA 72 bp | CCAACCTGCCTGAGCCTGAACTGTACTGAGCAGTACTaGACAGAGGATGAAGGGCACCAAGGAAGTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: PTCLSLNCTEQY*TEDEGHQGSSK Trigger: TTTGGAACTTCCTTGGTGCCCTTCATCCTCTGTGCAGTACTGCTCAGTACAGTTCAGGCTCAGGCAGGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235515.2 |
||
| 3UTR CCA 72 bp | GGCCACAGTGGTTCAGATGCTCTGAAGACCTGGTCTTaGTACAACAGAGCTCACTGGTATTTGCCCAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: GHSGSDALKTWS*YNRAHWYLPRL Trigger: CAGTCTGGGCAAATACCAGTGAGCTCTGTTGTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTTTCAATCAGGGCCAACCACTGGCAAAGATCTGTGCTTTTCTGCAACCTGTGTAGGTACCACCATTaGTCCCCCTCCCCTGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: RFSIRANHWQRSVLFCNLCRYHH*SPSPAK Trigger: TTTGGCAGGGGAGGGGGACAAATGGTGGTACCTACA...CAGGTTGCAGAAAAGCACAGATCTTTGCCAGTGGTTGGCCCTGATTGAAAACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR TCA 72 bp | GAACGAGTAGACAGAGGAGCTGCCTCGCTGCAGCAGTaGTGTTCACAGACCTTAGTGTTTCTAACCTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: ERVDRGAASLQQ*CSQTLVFLTFL Trigger: CAGGAAGGTTAGAAACACTAAGGTCTGTGAACATCACTGCTGCAGCGAGGCAGCTCCTCTGTCTACTCGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR TCA 72 bp | CAACAGAGCTCACTGGTATTTGCCCAGACTGGCAGTTaGAGGTCAAAGCCAGTGAGTGGGTTAGACAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: QQSSLVFAQTGS*RSKPVSGLDRL Trigger: CAGTCTGTCTAACCCACTCACTGGCTTTGACCTTCAACTGCCAGTCTGGGCAAATACCAGTGAGCTCTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR CCA 72 bp | ACAGGGATTCTGAGTCTGCACAGAGCCCTGGCACTCTaGTGGAAGCCTCAGTCACTTTTGTTGACAACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: TGILSLHRALAL*WKPQSLLLTTV Trigger: AACAGTTGTCAACAAAAGTGACTGAGGCTTCCACCAGAGTGCCAGGGCTCTGTGCAGACTCAGAATCCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR CCA 72 bp | AGAGAAGGCCACAGTGGTTCAGATGCTCTGAAGACCTaGTCTTGGTACAACAGAGCTCACTGGTATTTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: REGHSGSDALKT*SWYNRAHWYLP Trigger: GGGCAAATACCAGTGAGCTCTGTTGTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCCTTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR TCA 72 bp | AGACAGGTGGGTCATCATGCTTCCAGTAGAATCTCTTaGGCAGACAACAATGCCCAGGGGTTTGGGGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: RQVGHHASSRIS*ADNNAQGFGEQ Trigger: TTGTTCCCCAAACCCCTGGGCATTGTTGTCTGCTCAAGAGATTCTACTGGAAGCATGATGACCCACCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR GCA 72 bp | CCTGGGCAGGGAGTTGTGCCAGGCCTCAGAATTCTATaGATGAATGCCCTCTTTCTAAATCATGTTCGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PGQGVVPGLRIL*MNALFLNHVRR Trigger: CCTTCGAACATGATTTAGAAAGAGGGCATTCATGCATAGAATTCTGAGGCCTGGCACAACTCCCTGCCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR GCA 72 bp | CCAACCACTGGCAAAGATCTGTGCTTTTCTGCAACCTaGCTGTCTCTACACCAGACTCCAACATCCCTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: PTTGKDLCFSAT*LSLHQTPTSLN Trigger: GTTAAGGGATGTTGGAGTCTGGTGTAGAGACAGGCAGGTTGCAGAAAAGCACAGATCTTTGCCAGTGGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR GCA 72 bp | GGTTTTCAATCAGGGCCAACCACTGGCAAAGATCTGTaGTTTTCTGCAACCTGCCTGTCTCTACACCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: GFQSGPTTGKDL*FSATCLSLHQT Trigger: AGTCTGGTGTAGAGACAGGCAGGTTGCAGAAAAGCACAGATCTTTGCCAGTGGTTGGCCCTGATTGAAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR TCA 72 bp | ATCTTGACCACAAACACGCACTGCACTTTGCCTTCTTaGGGTTTTCTCTTCCCAGACAGGTGGGTCATCATG | + |
|
Preference number: 3 (lower is better) Translates to: ILTTNTHCTLPS*GFLFPDRWVIM Trigger: CATGATGACCCACCTGTCTGGGAAGAGAAAACCTCAAGAAGGCAAAGTGCAGTGCGTGTTTGTGGTCAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR TCA 72 bp | GGATTTGAGATGCCTCACTTTACCTCTGTAACATTCTaGGGCTTGTCACTCAATGTCCCCCGTGTCACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GFEMPHFTSVTF*GLSLNVPRVTV Trigger: CACTGTGACACGGGGGACATTGAGTGACAAGCCTCAGAATGTTACAGAGGTAAAGTGAGGCATCTCAAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR TCA 72 bp | AGACTAACAAGGAGGGTGGAGAGTCAGATAGCCCAGTaGGATGGGCTCATACTTTACAAGAGGGGTTATCTA | + |
|
Preference number: 3 (lower is better) Translates to: RLTRRVESQIAQ*DGLILYKRGYL Trigger: TAGATAACCCCTCTTGTAAAGTATGAGCCCATCTCACTGGGCTATCTGACTCTCCACCCTCCTTGTTAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR GCA 72 bp | GGGAGTTGTGCCAGGCCTCAGAATTCTATGCATGAATaGCCTCTTTCTAAATCATGTTCGAAGGAGTTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GSCARPQNSMHE*PLSKSCSKELH Trigger: GTGCAACTCCTTCGAACATGATTTAGAAAGAGGGCATTCATGCATAGAATTCTGAGGCCTGGCACAACTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAGGTCTCTCCGGGCATGTTCCTATATTCTCCGGAACATATCTTTTACCAACCAGATTCATAGTGGCATaGTCCCTCCAACTCCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LGLSGHVPIFSGTYLLPTRFIVA*SLQLLL Trigger: AAGCAGGAGTTGGAGGGACAATGCCACTATGAATCT...GGTTGGTAAAAGATATGTTCCGGAGAATATAGGAACATGCCCGGAGAGACCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAGGTCTCTCCGGGCATGTTCCTATATTCTCCGGAACATATCTTTTACCAACCTCATGTTCGAAGGAGTaGCACTGTTCCTCAGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: LGLSGHVPIFSGTYLLPTSCSKE*HCSSET Trigger: AGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGA...GGTTGGTAAAAGATATGTTCCGGAGAATATAGGAACATGCCCGGAGAGACCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR GCA 72 bp | ATGAATGCCCTCTTTCTAAATCATGTTCGAAGGAGTTaGACTGTTCCTCAGAGACTAACAAGGAGGGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: MNALFLNHVRRS*TVPQRLTRRVE Trigger: CTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGATTTAGAAAGAGGGCATTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTGGGAGGGAAGACCTCACTCTTTGTTTATGTTCTTTCTCCTTGGGGACCGGAAGAAATAACAGTTTaGAATTCCTGCTTCAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: SVGGKTSLFVYVLSPWGPEEITV*NSCFNS Trigger: GCTGTTGAAGCAGGAATTCAAAACTGTTATTTCTTC...CGGTCCCCAAGGAGAAAGAACATAAACAAAGAGTGAGGTCTTCCCTCCCACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTTTCAATCAGGGCCAACCACTGGCAAAGATCTGTGCTTTTCTGCAACCTGCCTCAGTCACTTTTGTaGACAACTGTTTTGTTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: RFSIRANHWQRSVLFCNLPQSLL*TTVLLN Trigger: GTTCAACAAAACAGTTGTCAACAAAAGTGACTGAGG...CAGGTTGCAGAAAAGCACAGATCTTTGCCAGTGGTTGGCCCTGATTGAAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTCCAACATCCCTTAACACCCTCATCTTGACCACAAACACGCACTGCACTTTGAAGCCTCAGTCACTTTaGTTGACAACTGTTTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: TPTSLNTLILTTNTHCTLKPQSL*LTTVLL Trigger: CAACAAAACAGTTGTCAACAAAAGTGACTGAGGCTT...CAAAGTGCAGTGCGTGTTTGTGGTCAAGATGAGGGTGTTAAGGGATGTTGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCACCTATTCTGAAGAAGGAGCCATAAAGGCAGCACTCTTTAATCCTGATTTTCTGCACTTTGCCTTCTaGAGGTTTTCTCTTCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: CTYSEEGAIKAALFNPDFLHFAF*RFSLPR Trigger: TCTGGGAAGAGAAAACCTCAAGAAGGCAAAGTGCAG...AAAATCAGGATTAAAGAGTGCTGCCTTTATGGCTCCTTCTTCAGAATAGGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCATGTTCCTATATTCTCCGGAACATATCTTTTACCAACCAGAAGATTACAAAAGATTCATAGTGGCATaGTCCCTCCAACTCCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GMFLYSPEHIFYQPEDYKRFIVA*SLQLLL Trigger: AAGCAGGAGTTGGAGGGACAATGCCACTATGAATCT...TTTGTAATCTTCTGGTTGGTAAAAGATATGTTCCGGAGAATATAGGAACATGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCACCTATTCTGAAGAAGGAGCCATAAAGGCAGCACTCTTTAATCCTGATTTTAAGCCTCAGTCACTTTaGTTGACAACTGTTTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: CTYSEEGAIKAALFNPDFKPQSL*LTTVLL Trigger: CAACAAAACAGTTGTCAACAAAAGTGACTGAGGCTT...AAAATCAGGATTAAAGAGTGCTGCCTTTATGGCTCCTTCTTCAGAATAGGTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCACCTATTCTGAAGAAGGAGCCATAAAGGCAGCACTCTTTAATCCTGATTTTCAAAACCCTATTTTATaGTTAGACCGGCACACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: CTYSEEGAIKAALFNPDFQNPIL*LDRHTL Trigger: CAAAGTGTGCCGGTCTAACAATAAAATAGGGTTTTG...AAAATCAGGATTAAAGAGTGCTGCCTTTATGGCTCCTTCTTCAGAATAGGTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR GCA 90 bp | CTGGAACCTGGATGGAATGAGACCCAAGAATTGCGTGTGCCAGGACCTTCCAGGTCCCGCCCGGAGCGCTaGGCCACCTCCTCCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LEPGWNETQELRVPGPSRSRPER*ATSSQV Trigger: TACTTGGGAGGAGGTGGCGCAGCGCTCCGGGCGGGA...CCTGGAAGGTCCTGGCACACGCAATTCTTGGGTCTCATTCCATCCAGGTTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR GCA 90 bp | GCTTCTTCTTTTCCCTCCCGAGCTCCACAGGAAGGACCTTCCCCAGGGCGAAGAGGTTCAAAGCTGGGTTaGTCCGGAGCCAGCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASSFPSRAPQEGPSPGRRGSKLG*SGASSP Trigger: TGGAGAGCTGGCTCCGGAGCAACCCAGCTTTGAACC...TCTTCGCCCTGGGGAAGGTCCTTCCTGTGGAGCTCGGGAGGGAAAAGAAGAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235515.2 |
||
| CDS-3UTR CCA 90 bp | TTGGCCTTCATGAGGCCCATTCGCTCTACTGTGGCCCGCAGCTCCCGGAATTCATGGTGGGTTCAAAGCTaGGTTGCTCCGGAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LAFMRPIRSTVARSSRNSWWVQS*VAPEPA Trigger: AGCTGGCTCCGGAGCAACCCAGCTTTGAACCCACCA...TGAATTCCGGGAGCTGCGGGCCACAGTAGAGCGAATGGGCCTCATGAAGGCCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235515.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCAGGTGGCCAATCACAAAATGATGTAGCAGGTGATTCCATGTCGAGGTGCTCCCGCCCGGAGCGCTaGGCCACCTCCTCCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PSGGQSQNDVAGDSMSRCSRPER*ATSSQV Trigger: TACTTGGGAGGAGGTGGCGCAGCGCTCCGGGCGGGA...GCACCTCGACATGGAATCACCTGCTACATCATTTTGTGATTGGCCACCTGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235515.2 |
||
| CDS-3UTR GCA 90 bp | AGGGAACGGGCACGGGGAGGGGTCTGCACCTATTCTGAAGAAGGAGCCATAAAGGTGAACGTTGCAGGTTaGCTGCAGCTGGGTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RERARGGVCTYSEEGAIKVNVAG*LQLGGD Trigger: GTCTCCACCCAGCTGCAGGCAACCTGCAACGTTCAC...CTTTATGGCTCCTTCTTCAGAATAGGTGCAGACCCCTCCCCGTGCCCGTTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAACGGGCACGGGGAGGGGTCTGCACCTATTCTGAAGAAGGAGCCATAAAGACCAGGAAGAAGAGGTaGTTGGCCTTCATGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RERARGGVCTYSEEGAIKTRKKR*LAFMRP Trigger: GGGCCTCATGAAGGCCAACCACCTCTTCTTCCTGGT...CTTTATGGCTCCTTCTTCAGAATAGGTGCAGACCCCTCCCCGTGCCCGTTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR CCA 90 bp | CTGGAACCTGGATGGAATGAGACCCAAGAATTGCGTGTGCCAGGACCTTCCAGGTTGCCTGCAGCTGGGTaGAGACCCAGTCCACATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LEPGWNETQELRVPGPSRLPAAG*RPSPHS Trigger: GGAATGTGGACTGGGTCTCCACCCAGCTGCAGGCAA...CCTGGAAGGTCCTGGCACACGCAATTCTTGGGTCTCATTCCATCCAGGTTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR TCA 90 bp | TCCTGGGCAGGGAGTTGTGCCAGGCCTCAGAATTCTATGCATGAATGCCCTCTTGGTGGTTGGCCTTCATaGGGCCCATTCGCTCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: SWAGSCARPQNSMHECPLGGWPS*GPFALL Trigger: CAGTAGAGCGAATGGGCCTCATGAAGGCCAACCACC...AAGAGGGCATTCATGCATAGAATTCTGAGGCCTGGCACAACTCCCTGCCCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGGGCAGGGAGTTGTGCCAGGCCTCAGAATTCTATGCATGAATGCCCTCTTGCGTCCAACCAGAGTTaGCCTGACTCCTTCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SWAGSCARPQNSMHECPLASNQS*PDSFRE Trigger: CTCCCTGAAGGAGTCAGGGCAACTCTGGTTGGACGC...AAGAGGGCATTCATGCATAGAATTCTGAGGCCTGGCACAACTCCCTGCCCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGCAGGGAGTTGTGCCAGGCCTCAGAATTCTATGCATGAATGCCCTCTTCCATTCGCTCTACTGTaGCCCGCAGCTCCCGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: SWAGSCARPQNSMHECPLPFALL*PAAPGI Trigger: AATTCCGGGAGCTGCGGGCCACAGTAGAGCGAATGG...AAGAGGGCATTCATGCATAGAATTCTGAGGCCTGGCACAACTCCCTGCCCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR CCA 90 bp | ACTCCAACATCCCTTAACACCCTCATCTTGACCACAAACACGCACTGCACTTTGTGTGGTTCCACCAGCTaGCGGGGGCCCCCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TPTSLNTLILTTNTHCTLCGSTS*RGPPSG Trigger: ACCTGAAGGGGGCCCCCGCCAGCTGGTGGAACCACA...CAAAGTGCAGTGCGTGTTTGTGGTCAAGATGAGGGTGTTAAGGGATGTTGGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR GCA 90 bp | GTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTCAGGCGTCCAACCAGAGTTaGCCTGACTCCTTCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VRRSCTVPQRLTRRVESQASNQS*PDSFRE Trigger: CTCCCTGAAGGAGTCAGGGCAACTCTGGTTGGACGC...CTGACTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGAAGAGAAGGCCACAGTGGTTCAGATGCTCTGAAGACCTGGTCTTGGTACTGGTGGGTTCAAAGCTaGGTTGCTCCGGAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRREGHSGSDALKTWSWYWWVQS*VAPEPA Trigger: AGCTGGCTCCGGAGCAACCCAGCTTTGAACCCACCA...GTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCCTTCTCTTCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010807.6 |
||
| CDS-3UTR CCA 90 bp | AGAGAAGGCCACAGTGGTTCAGATGCTCTGAAGACCTGGTCTTGGTACAACAGACAGGTTGCCTGCAGCTaGGTGGAGACCCAGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: REGHSGSDALKTWSWYNRQVACS*VETQST Trigger: TGTGGACTGGGTCTCCACCCAGCTGCAGGCAACCTG...TCTGTTGTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCCTTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTCACAGGTTGCCTGCAGCTaGGTGGAGACCCAGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CSKELHCSSETNKEGGESQVACS*VETQST Trigger: TGTGGACTGGGTCTCCACCCAGCTGCAGGCAACCTG...TGACTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 ENSMUST00000237861.2 |
||
| 3UTR CAA 72 bp | TTCTCTCTGGAACCTGGATGGAATGAGACCCAAGAATaGCGTGTGCCAGGACCTTCCAGGGCCAAATGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSLEPGWNETQE*RVPGPSRAKCL Trigger: GAGGCATTTGGCCCTGGAAGGTCCTGGCACACGCAATTCTTGGGTCTCATTCCATCCAGGTTCCAGAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR TCA 90 bp | TCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTCAGATGGTGGTTGGCCTTCATaGGGCCCATTCGCTCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: SKELHCSSETNKEGGESDGGWPS*GPFALL Trigger: CAGTAGAGCGAATGGGCCTCATGAAGGCCAACCACC...ATCTGACTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR TCA 90 bp | GTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTCAGCAAAGATCCAAAGGGTaGGCCAGGCAGCCACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRRSCTVPQRLTRRVESQQRSKG*ARQPHP Trigger: TGGATGTGGCTGCCTGGCTCACCCTTTGGATCTTTG...CTGACTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR TCA 90 bp | AGGTTTTCAATCAGGGCCAACCACTGGCAAAGATCTGTGCTTTTCTGCAACCTGTGTCCGCGAAGGCTGTaGGCAGGGGCTTGGACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RFSIRANHWQRSVLFCNLCPRRL*AGAWTH Trigger: ATGAGTCCAAGCCCCTGCTCACAGCCTTCGCGGACA...CAGGTTGCAGAAAAGCACAGATCTTTGCCAGTGGTTGGCCCTGATTGAAAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTAAATCATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGTCCCGCCCGGAGCGCTaGGCCACCTCCTCCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLNHVRRSCTVPQRLTRRSRPER*ATSSQV Trigger: TACTTGGGAGGAGGTGGCGCAGCGCTCCGGGCGGGA...CCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGATTTAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR GCA 90 bp | CCCATTCGCTCTACTGTGGCCCGCAGCTCCCGGAATTCATCAGTTAGCGCTTTCCTTGTTGATGTGGAATaGCACAAAAGGATCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PIRSTVARSSRNSSVSAFLVDVE*HKRIRG Trigger: GCCACGGATCCTTTTGTGGCATTCCACATCAACAAG...GAAAGCGCTAACTGATGAATTCCGGGAGCTGCGGGCCACAGTAGAGCGAATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235515.2 |
||
| CDS-3UTR GCA 90 bp | GACCACAAACACGCACTGCACTTTGCCTTCTTGAGGTTTTCTCTTCCCAGACAGGGTTCAAAGCTGGGTTaGTCCGGAGCCAGCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DHKHALHFAFLRFSLPRQGSKLG*SGASSP Trigger: TGGAGAGCTGGCTCCGGAGCAACCCAGCTTTGAACC...CTGTCTGGGAAGAGAAAACCTCAAGAAGGCAAAGTGCAGTGCGTGTTTGTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010807.6 |
||
| CDS-3UTR GCA 90 bp | CTGGAACCTGGATGGAATGAGACCCAAGAATTGCGTGTGCCAGGACCTTCCAGGCCAAAGACTGACAGGTaGCCAAAGTCATGCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEPGWNETQELRVPGPSRPKTDR*PKSCCS Trigger: GCTACAGCATGACTTTGGGCACCTGTCAGTCTTTGG...CCTGGAAGGTCCTGGCACACGCAATTCTTGGGTCTCATTCCATCCAGGTTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR GCA 90 bp | TGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTCAGTGAACGTTGCAGGTTaGCTGCAGCTGGGTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CSKELHCSSETNKEGGESVNVAG*LQLGGD Trigger: GTCTCCACCCAGCTGCAGGCAACCTGCAACGTTCAC...TGACTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 ENSMUST00000237861.2 |
||
| CDS-3UTR CCA 90 bp | CGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTCAGATATGCTGGAAATGCATGTaGTTCCACCAGCTGGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRSCTVPQRLTRRVESQICWKCM*FHQLAG Trigger: CCCCGCCAGCTGGTGGAACCACATGCATTTCCAGCA...TATCTGACTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR CCA 90 bp | CATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTTGCTGGAAATGCATGTaGTTCCACCAGCTGGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HVRRSCTVPQRLTRRVESCWKCM*FHQLAG Trigger: CCCCGCCAGCTGGTGGAACCACATGCATTTCCAGCA...ACTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR CCA 90 bp | CTGGAACCTGGATGGAATGAGACCCAAGAATTGCGTGTGCCAGGACCTTCCAGGCAGTTAGGCTTGGCATaGTGCTGGAAATGCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEPGWNETQELRVPGPSRQLGLA*CWKCMW Trigger: CCACATGCATTTCCAGCACCATGCCAAGCCTAACTG...CCTGGAAGGTCCTGGCACACGCAATTCTTGGGTCTCATTCCATCCAGGTTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR CCA 90 bp | GACCACAAACACGCACTGCACTTTGCCTTCTTGAGGTTTTCTCTTCCCAGACAGTTGCCTGCAGCTGGGTaGAGACCCAGTCCACATTCC | + |
|
Preference number: 4 (lower is better) Translates to: DHKHALHFAFLRFSLPRQLPAAG*RPSPHS Trigger: GGAATGTGGACTGGGTCTCCACCCAGCTGCAGGCAA...CTGTCTGGGAAGAGAAAACCTCAAGAAGGCAAAGTGCAGTGCGTGTTTGTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR CCA 90 bp | TCATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTTGCCTGCAGCTGGGTaGAGACCCAGTCCACATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SCSKELHCSSETNKEGGELPAAG*RPSPHS Trigger: GGAATGTGGACTGGGTCTCCACCCAGCTGCAGGCAA...CTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 ENSMUST00000237861.2 |
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| CDS-3UTR TCA 90 bp | GACCACAAACACGCACTGCACTTTGCCTTCTTGAGGTTTTCTCTTCCCAGACAGCGAGGTGCCAAAGACTaGCAGGTGCCCAAAGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: DHKHALHFAFLRFSLPRQRGAKD*QVPKVM Trigger: CATGACTTTGGGCACCTGTCAGTCTTTGGCACCTCG...CTGTCTGGGAAGAGAAAACCTCAAGAAGGCAAAGTGCAGTGCGTGTTTGTGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR GCA 90 bp | AGGCCACAGTGGTTCAGATGCTCTGAAGACCTGGTCTTGGTACAACAGAGCTCAGATTCCATGTCGAGGTaGCAAAGACTGACAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RPQWFRCSEDLVLVQQSSDSMSR*QRLTGA Trigger: GGCACCTGTCAGTCTTTGGCACCTCGACATGGAATC...TGAGCTCTGTTGTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR GCA 90 bp | AGGCCACAGTGGTTCAGATGCTCTGAAGACCTGGTCTTGGTACAACAGAGCTCAGCATGGTGCTGGAAATaGATGTGGTTCCACCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPQWFRCSEDLVLVQQSSAWCWK*MWFHQL Trigger: CAGCTGGTGGAACCACATGCATTTCCAGCACCATGC...TGAGCTCTGTTGTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR CCA 90 bp | TGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTCAACCAGGAAGAAGAGGTaGTTGGCCTTCATGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CSKELHCSSETNKEGGESTRKKR*LAFMRP Trigger: GGGCCTCATGAAGGCCAACCACCTCTTCTTCCTGGT...TGACTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR CCA 90 bp | CTTTCTAAATCATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGTGTGGTTCCACCAGCTaGCGGGGGCCCCCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSKSCSKELHCSSETNKECGSTS*RGPPSG Trigger: ACCTGAAGGGGGCCCCCGCCAGCTGGTGGAACCACA...CTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGATTTAGAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR TCA 90 bp | TCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTCAGATGTACTGCACAGAGGATaGAGGGCACCAAGGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKELHCSSETNKEGGESDVLHRG*RAPRKF Trigger: GAACTTCCTTGGTGCCCTTCATCCTCTGTGCAGTAC...ATCTGACTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR TCA 90 bp | CTAAATCATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGTGCGGGCATAGAAGCTaGGCATCCAGGCCAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LNHVRRSCTVPQRLTRRVCGHRS*ASRPSP Trigger: TGGACTTGGCCTGGATGCTCAGCTTCTATGCCCGCA...CACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGATTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 ENSMUST00000237861.2 |
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| CDS-3UTR TCA 90 bp | TTTTTCCTACACAGTCTGTTTCAAACAGGTTTTCAATCAGGGCCAACCACTGGCTGTCCGCGAAGGCTGTaGGCAGGGGCTTGGACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FFLHSLFQTGFQSGPTTGCPRRL*AGAWTH Trigger: ATGAGTCCAAGCCCCTGCTCACAGCCTTCGCGGACA...GCCAGTGGTTGGCCCTGATTGAAAACCTGTTTGAAACAGACTGTGTAGGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR GCA 90 bp | AAGAGAAGGCCACAGTGGTTCAGATGCTCTGAAGACCTGGTCTTGGTACAACAGGATTCCATGTCGAGGTaGCAAAGACTGACAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KRRPQWFRCSEDLVLVQQDSMSR*QRLTGA Trigger: GGCACCTGTCAGTCTTTGGCACCTCGACATGGAATC...CTGTTGTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCCTTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR GCA 90 bp | CGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTCAGATAGCATGGTGCTGGAAATaGATGTGGTTCCACCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRSCTVPQRLTRRVESQIAWCWK*MWFHQL Trigger: CAGCTGGTGGAACCACATGCATTTCCAGCACCATGC...TATCTGACTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR CCA 90 bp | TTTTCTGCAACCTGCCTGTCTCTACACCAGACTCCAACATCCCTTAACACCCTCGGCTTGGCATGGTGCTaGAAATGCATGTGGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSATCLSLHQTPTSLNTLGLAWC*KCMWFH Trigger: GTGGAACCACATGCATTTCCAGCACCATGCCAAGCC...GAGGGTGTTAAGGGATGTTGGAGTCTGGTGTAGAGACAGGCAGGTTGCAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR CCA 90 bp | TCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTCAGATGGCTTGGCATGGTGCTaGAAATGCATGTGGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SKELHCSSETNKEGGESDGLAWC*KCMWFH Trigger: GTGGAACCACATGCATTTCCAGCACCATGCCAAGCC...ATCTGACTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR CAA 72 bp | AGGCCACAGTGGTTCAGATGCTCTGAAGACCTGGTCTaGGTACAACAGAGCTCACTGGTATTTGCCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: RPQWFRCSEDLV*VQQSSLVFAQT Trigger: AGTCTGGGCAAATACCAGTGAGCTCTGTTGTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR TCA 90 bp | AAATCATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGACGAGGTGCCAAAGACTaGCAGGTGCCCAAAGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: KSCSKELHCSSETNKEGGRGAKD*QVPKVM Trigger: CATGACTTTGGGCACCTGTCAGTCTTTGGCACCTCG...TCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR TCA 90 bp | AGAGCCCTGGCACTCTGGTGGAAGCCTCAGTCACTTTTGTTGACAACTGTTTTGTCCACATTCCGGTCGTaGTCAATGTGCATGGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: RALALWWKPQSLLLTTVLSTFRS*SMCMGI Trigger: TATCCCCATGCACATTGATCACGACCGGAATGTGGA...CAAAACAGTTGTCAACAAAAGTGACTGAGGCTTCCACCAGAGTGCCAGGGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR TCA 90 bp | CATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTTCCACATTCCGGTCGTaGTCAATGTGCATGGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: HVRRSCTVPQRLTRRVESSTFRS*SMCMGI Trigger: TATCCCCATGCACATTGATCACGACCGGAATGTGGA...ACTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 ENSMUST00000237861.2 |
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| CDS-3UTR GCA 90 bp | AAGAGAAGGCCACAGTGGTTCAGATGCTCTGAAGACCTGGTCTTGGTACAACAGTGTACTGAGCAGTACTaGACAGAGGATGAAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KRRPQWFRCSEDLVLVQQCTEQY*TEDEGH Trigger: GTGCCCTTCATCCTCTGTGCAGTACTGCTCAGTACA...CTGTTGTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCCTTCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR GCA 90 bp | CGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTCAGATACCAAAGACTGACAGGTaGCCAAAGTCATGCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRSCTVPQRLTRRVESQIPKTDR*PKSCCS Trigger: GCTACAGCATGACTTTGGGCACCTGTCAGTCTTTGG...TATCTGACTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTTTCTAAATCATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGCAGGTTGCCTGCAGCTaGGTGGAGACCCAGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PLSKSCSKELHCSSETNKQVACS*VETQST Trigger: TGTGGACTGGGTCTCCACCCAGCTGCAGGCAACCTG...CTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGATTTAGAAAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 ENSMUST00000237861.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCCCCTTCAGGTGGCCAATCACAAAATGATGTAGCAGGTGATTCCATGTCGAGATACCATTCTTGGTaGGTTCAAAGCTGGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPPSGGQSQNDVAGDSMSRYHSW*VQSWVA Trigger: AGCAACCCAGCTTTGAACCCACCAAGAATGGTATCT...CGACATGGAATCACCTGCTACATCATTTTGTGATTGGCCACCTGAAGGGGGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235515.2 |
||
| CDS-3UTR CCA 90 bp | TGCCAAAGACTGACAGGTGCCCAAAGTCATGCTGTAGCCAACCTGCCTGAGCCTCAAAGATACCATTCTTaGTGGGTTCAAAGCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CQRLTGAQSHAVANLPEPQRYHS*WVQSWV Trigger: AACCCAGCTTTGAACCCACCAAGAATGGTATCTTTG...AGGCTCAGGCAGGTTGGCTACAGCATGACTTTGGGCACCTGTCAGTCTTTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235515.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTAAATCATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGTGCGGGCATAGAAGCTaGGCATCCAGGCCAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLNHVRRSCTVPQRLTRRCGHRS*ASRPSP Trigger: TGGACTTGGCCTGGATGCTCAGCTTCTATGCCCGCA...CCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGATTTAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 ENSMUST00000237861.2 |
||
| CDS-3UTR TCA 90 bp | GCGGTTTTCTTATCTGTCAGTGGATTTGAGATGCCTCACTTTACCTCTGTAACATGCGGGCATAGAAGCTaGGCATCCAGGCCAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVFLSVSGFEMPHFTSVTCGHRS*ASRPSP Trigger: TGGACTTGGCCTGGATGCTCAGCTTCTATGCCCGCA...TGTTACAGAGGTAAAGTGAGGCATCTCAAATCCACTGACAGATAAGAAAACCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR GCA 90 bp | GCCCTCTTTCTAAATCATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAGCGAAGAAGAGGGGGTaGATGTTGATATCGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALFLNHVRRSCTVPQRLTAKKRG*MLISGS Trigger: GGACCCCGATATCAACATGCACCCCCTCTTCTTCGC...TGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGATTTAGAAAGAGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAAGGCCACAGTGGTTCAGATGCTCTGAAGACCTGGTCTTGGTACAACAGATGGTTGTATGGCATGTaGTTCTTCTTTTCCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: REGHSGSDALKTWSWYNRWLYGM*FFFSLP Trigger: CGGGAGGGAAAAGAAGAAGCACATGCCATACAACCA...TCTGTTGTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCCTTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
||
| CDS-3UTR GCA 90 bp | CTCTTTCTAAATCATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGGTGAACGTTGCAGGTTaGCTGCAGCTGGGTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LFLNHVRRSCTVPQRLTRVNVAG*LQLGGD Trigger: GTCTCCACCCAGCTGCAGGCAACCTGCAACGTTCAC...CCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGATTTAGAAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 ENSMUST00000237861.2 |
||
| CDS-3UTR CCA 90 bp | AGGTTTTCAATCAGGGCCAACCACTGGCAAAGATCTGTGCTTTTCTGCAACCTGCAGTTAGGCTTGGCATaGTGCTGGAAATGCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RFSIRANHWQRSVLFCNLQLGLA*CWKCMW Trigger: CCACATGCATTTCCAGCACCATGCCAAGCCTAACTG...CAGGTTGCAGAAAAGCACAGATCTTTGCCAGTGGTTGGCCCTGATTGAAAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR CCA 90 bp | CTCTTTCTAAATCATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGTGTGCCGCGGCATGGTaGGGAAGAGGTGGTGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: LFLNHVRRSCTVPQRLTRCAAAW*GRGGVQ Trigger: TTGAACACCACCTCTTCCCCACCATGCCGCGGCACA...CCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGATTTAGAAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR TCA 90 bp | AAGAGAAGGCCACAGTGGTTCAGATGCTCTGAAGACCTGGTCTTGGTACAACAGAAGAAGTACTTGTGCTaGTGGTTGTATGGCATGTGC | + |
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Preference number: 4 (lower is better) Translates to: KRRPQWFRCSEDLVLVQQKKYLC*WLYGMC Trigger: GCACATGCCATACAACCATCAGCACAAGTACTTCTT...CTGTTGTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCCTTCTCTT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR TCA 90 bp | GACCACAAACACGCACTGCACTTTGCCTTCTTGAGGTTTTCTCTTCCCAGACAGAAGAAGTACTTGTGCTaGTGGTTGTATGGCATGTGC | + |
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Preference number: 4 (lower is better) Translates to: DHKHALHFAFLRFSLPRQKKYLC*WLYGMC Trigger: GCACATGCCATACAACCATCAGCACAAGTACTTCTT...CTGTCTGGGAAGAGAAAACCTCAAGAAGGCAAAGTGCAGTGCGTGTTTGTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR GCA 90 bp | GGTGACTTTCCCTCTAACGCGGTTTTCTTATCTGTCAGTGGATTTGAGATGCCTTGTACTGAGCAGTACTaGACAGAGGATGAAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GDFPSNAVFLSVSGFEMPCTEQY*TEDEGH Trigger: GTGCCCTTCATCCTCTGTGCAGTACTGCTCAGTACA...AGGCATCTCAAATCCACTGACAGATAAGAAAACCGCGTTAGAGGGAAAGTCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR GCA 90 bp | GCGGTTTTCTTATCTGTCAGTGGATTTGAGATGCCTCACTTTACCTCTGTAACAGCGAAGAAGAGGGGGTaGATGTTGATATCGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AVFLSVSGFEMPHFTSVTAKKRG*MLISGS Trigger: GGACCCCGATATCAACATGCACCCCCTCTTCTTCGC...TGTTACAGAGGTAAAGTGAGGCATCTCAAATCCACTGACAGATAAGAAAACCGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR CCA 90 bp | GACCACAAACACGCACTGCACTTTGCCTTCTTGAGGTTTTCTCTTCCCAGACAGCGTGATCAATGTGCATaGGGATATGGTTCATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DHKHALHFAFLRFSLPRQRDQCA*GYGSSV Trigger: CACAGATGAACCATATCCCCATGCACATTGATCACG...CTGTCTGGGAAGAGAAAACCTCAAGAAGGCAAAGTGCAGTGCGTGTTTGTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR CCA 90 bp | CATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTCGTGATCAATGTGCATaGGGATATGGTTCATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HVRRSCTVPQRLTRRVESRDQCA*GYGSSV Trigger: CACAGATGAACCATATCCCCATGCACATTGATCACG...ACTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 ENSMUST00000237861.2 |
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| CDS-3UTR TCA 90 bp | TGCACCTATTCTGAAGAAGGAGCCATAAAGGCAGCACTCTTTAATCCTGATTTTCAAAGATCCAAAGGGTaGGCCAGGCAGCCACATCCA | + |
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Preference number: 4 (lower is better) Translates to: CTYSEEGAIKAALFNPDFQRSKG*ARQPHP Trigger: TGGATGTGGCTGCCTGGCTCACCCTTTGGATCTTTG...AAAATCAGGATTAAAGAGTGCTGCCTTTATGGCTCCTTCTTCAGAATAGGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR CCA 90 bp | CATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTGTGCTGATGGTTGTATaGCATGTGCTTCTTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HVRRSCTVPQRLTRRVESVLMVV*HVLLLF Trigger: GAAAAGAAGAAGCACATGCCATACAACCATCAGCAC...ACTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR CCA 90 bp | AACATTAGATTCATAGTGGCATTGTCCCTCCAACTCCTGCTTTGGCTCCAGGTGCGTGATCAATGTGCATaGGGATATGGTTCATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NIRFIVALSLQLLLWLQVRDQCA*GYGSSV Trigger: CACAGATGAACCATATCCCCATGCACATTGATCACG...CACCTGGAGCCAAAGCAGGAGTTGGAGGGACAATGCCACTATGAATCTAATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR TCA 90 bp | CCTCTTTCTAAATCATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGTCCACATTCCGGTCGTaGTCAATGTGCATGGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: PLSKSCSKELHCSSETNKSTFRS*SMCMGI Trigger: TATCCCCATGCACATTGATCACGACCGGAATGTGGA...CTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGATTTAGAAAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 ENSMUST00000237861.2 |
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| CDS-3UTR CCA 90 bp | AGGTTTTCAATCAGGGCCAACCACTGGCAAAGATCTGTGCTTTTCTGCAACCTGGTGCTGATGGTTGTATaGCATGTGCTTCTTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RFSIRANHWQRSVLFCNLVLMVV*HVLLLF Trigger: GAAAAGAAGAAGCACATGCCATACAACCATCAGCAC...CAGGTTGCAGAAAAGCACAGATCTTTGCCAGTGGTTGGCCCTGATTGAAAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR CAA 72 bp | TTCCCTAACCTTTTAAACATTAGATTCATAGTGGCATaGTCCCTCCAACTCCTGCTTTGGCTCCAGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPNLLNIRFIVA*SLQLLLWLQVS Trigger: GGACACCTGGAGCCAAAGCAGGAGTTGGAGGGACAATGCCACTATGAATCTAATGTTTAAAAGGTTAGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR CAA 72 bp | CATGAATGCCCTCTTTCTAAATCATGTTCGAAGGAGTaGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HECPLSKSCSKE*HCSSETNKEGG Trigger: TCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGATTTAGAAAGAGGGCATTCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| 3UTR CAA 72 bp | GCCCTGGCACTCTGGTGGAAGCCTCAGTCACTTTTGTaGACAACTGTTTTGTTGAACTTAGAATTACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALALWWKPQSLL*TTVLLNLELQA Trigger: AGCCTGTAATTCTAAGTTCAACAAAACAGTTGTCAACAAAAGTGACTGAGGCTTCCACCAGAGTGCCAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR GCA 90 bp | CCTCTTTCTAAATCATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGCTTGTTGATGTGGAATaGCACAAAAGGATCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLSKSCSKELHCSSETNKLVDVE*HKRIRG Trigger: GCCACGGATCCTTTTGTGGCATTCCACATCAACAAG...CTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGATTTAGAAAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010807.6 |
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| CDS-3UTR CCA 90 bp | CTTTCTAAATCATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGCGCTTTATTCTTGGTaGGTTCAAAGCTGGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSKSCSKELHCSSETNKEALYSW*VQSWVA Trigger: AGCAACCCAGCTTTGAACCCACCAAGAATAAAGCGC...CTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGATTTAGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010807.6 |
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| 3UTR CAA 72 bp | AGAGCCCTGGCACTCTGGTGGAAGCCTCAGTCACTTTaGTTGACAACTGTTTTGTTGAACTTAGAATTACAG | + |
|
Preference number: 4 (lower is better) Translates to: RALALWWKPQSL*LTTVLLNLELQ Trigger: CTGTAATTCTAAGTTCAACAAAACAGTTGTCAACAAAAGTGACTGAGGCTTCCACCAGAGTGCCAGGGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR CCA 90 bp | AGACCTCACTCTTTGTTTATGTTCTTTCTCCTTGGGGACCGATTAGAAGAGATGTTAGCGCTTTATTCTTaGTGGGTTCAAAGCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RPHSLFMFFLLGDRLEEMLALYS*WVQSWV Trigger: AACCCAGCTTTGAACCCACCAAGAATAAAGCGCTAA...CATCTCTTCTAATCGGTCCCCAAGGAGAAAGAACATAAACAAAGAGTGAGGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010807.6 |
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| CDS-3UTR GCA 90 bp | ACCAGAAGATTACAAAACCCTATTTTATTGTTAGACCGGCACACTTTGTCAGAATGGTTGTATGGCATGTaGTTCTTCTTTTCCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TRRLQNPILLLDRHTLSEWLYGM*FFFSLP Trigger: CGGGAGGGAAAAGAAGAAGCACATGCCATACAACCA...TTCTGACAAAGTGTGCCGGTCTAACAATAAAATAGGGTTTTGTAATCTTCTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR CAA 90 bp | GTGCTTCTTCTTTTCCCTCCCGAGCTCCACAGGAAGGACCTTCCCCAGGGCGAACTCACAAGACCCTTGTaGATGTGGAATGCCACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: VLLLFPPELHRKDLPQGELTRPL*MWNATK Trigger: TTTTGTGGCATTCCACATCAACAAGGGTCTTGTGAG...TTCGCCCTGGGGAAGGTCCTTCCTGTGGAGCTCGGGAGGGAAAAGAAGAAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235515.2 |
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| CDS-3UTR CAA 90 bp | AAATCATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGGGTTCAAAGCTGGGTaGCTCCGGAGCCAGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSCSKELHCSSETNKEGGGFKAG*LRSQLS Trigger: GGAGAGCTGGCTCCGGAGCAACCCAGCTTTGAACCC...TCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010807.6 |
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| CDS-3UTR CAA 90 bp | CGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTCAGATAGCTGTGAGCAGGGGCTaGGACTCATACTTGATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RRSCTVPQRLTRRVESQIAVSRG*DSYLMP Trigger: CGGCATCAAGTATGAGTCCAAGCCCCTGCTCACAGC...TATCTGACTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR CAA 90 bp | CCCATTCGCTCTACTGTGGCCCGCAGCTCCCGGAATTCATCAGTTAGCGCTTTCTTTCTCACAAGACCCTaGTTGATGTGGAATGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PIRSTVARSSRNSSVSAFFLTRP*LMWNAT Trigger: TGTGGCATTCCACATCAACAAGGGTCTTGTGAGAAA...GAAAGCGCTAACTGATGAATTCCGGGAGCTGCGGGCCACAGTAGAGCGAATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235515.2 |
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| CDS-3UTR CAA 90 bp | AATCATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGGCTGTGAGCAGGGGCTaGGACTCATACTTGATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NHVRRSCTVPQRLTRRVEAVSRG*DSYLMP Trigger: CGGCATCAAGTATGAGTCCAAGCCCCTGCTCACAGC...CTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR CAA 90 bp | CCAACCTGCCTGAGCCTGAACTGTACTGAGCAGTACTGCACAGAGGATGAAGGGGCAAAGATACCATTCTaGGTGGGTTCAAAGCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PTCLSLNCTEQYCTEDEGAKIPF*VGSKLG Trigger: ACCCAGCTTTGAACCCACCAAGAATGGTATCTTTGC...CCCTTCATCCTCTGTGCAGTACTGCTCAGTACAGTTCAGGCTCAGGCAGGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235515.2 |
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| CDS-3UTR CAA 90 bp | CGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTCAGATATTGATATCGGGGTCCTaGCGGAAGCAGTTAGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RRSCTVPQRLTRRVESQILISGS*RKQLGL Trigger: CAAGCCTAACTGCTTCCGCAAGGACCCCGATATCAA...TATCTGACTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR CAA 90 bp | GCCCTCTTTCTAAATCATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAGGTGAACGTTGCAGGTaGCCTGCAGCTGGGTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALFLNHVRRSCTVPQRLTGERCR*PAAGWR Trigger: TCTCCACCCAGCTGCAGGCAACCTGCAACGTTCACC...TGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGATTTAGAAAGAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 ENSMUST00000237861.2 |
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| CDS-3UTR CAA 90 bp | TCTAAATCATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGTGAACGTTGCAGGTaGCCTGCAGCTGGGTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SKSCSKELHCSSETNKEGGERCR*PAAGWR Trigger: TCTCCACCCAGCTGCAGGCAACCTGCAACGTTCACC...ACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGATTTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 ENSMUST00000237861.2 |
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| CDS-3UTR CAA 90 bp | AGACCTCACTCTTTGTTTATGTTCTTTCTCCTTGGGGACCGATTAGAAGAGATGGGTGAACGTTGCAGGTaGCCTGCAGCTGGGTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RPHSLFMFFLLGDRLEEMGERCR*PAAGWR Trigger: TCTCCACCCAGCTGCAGGCAACCTGCAACGTTCACC...CATCTCTTCTAATCGGTCCCCAAGGAGAAAGAACATAAACAAAGAGTGAGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS-3UTR CAA 90 bp | AGGCCACAGTGGTTCAGATGCTCTGAAGACCTGGTCTTGGTACAACAGAGCTCATTTCTCACAAGACCCTaGTTGATGTGGAATGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: RPQWFRCSEDLVLVQQSSFLTRP*LMWNAT Trigger: TGTGGCATTCCACATCAACAAGGGTCTTGTGAGAAA...TGAGCTCTGTTGTACCAAGACCAGGTCTTCAGAGCATCTGAACCACTGTGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010807.6 |
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| CDS-3UTR CAA 90 bp | CATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTGTTAGCGCTTTATTCTaGGTGGGTTCAAAGCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HVRRSCTVPQRLTRRVESVSALF*VGSKLG Trigger: ACCCAGCTTTGAACCCACCAAGAATAAAGCGCTAAC...ACTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010807.6 |
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| CDS-3UTR CAA 90 bp | TCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGAGGGTGGAGAGTCAGATCTCACAAGACCCTTGTaGATGTGGAATGCCACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SKELHCSSETNKEGGESDLTRPL*MWNATK Trigger: TTTTGTGGCATTCCACATCAACAAGGGTCTTGTGAG...ATCTGACTCTCCACCCTCCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010807.6 |
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| CDS-3UTR CAA 90 bp | CTCTTTCTAAATCATGTTCGAAGGAGTTGCACTGTTCCTCAGAGACTAACAAGGTTGATATCGGGGTCCTaGCGGAAGCAGTTAGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LFLNHVRRSCTVPQRLTRLISGS*RKQLGL Trigger: CAAGCCTAACTGCTTCCGCAAGGACCCCGATATCAA...CCTTGTTAGTCTCTGAGGAACAGTGCAACTCCTTCGAACATGATTTAGAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS CAA 72 bp | GTGAGCAGGGGCTTGGACTCATACTTGATGCCGTACTaGGCGCACAGGGATTGTACTAGGGGTGCCACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VSRGLDSYLMPY*AHRDCTRGATL Trigger: CAAGGTGGCACCCCTAGTACAATCCCTGTGCGCCAAGTACGGCATCAAGTATGAGTCCAAGCCCCTGCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS CAA 72 bp | TCCGCGAAGGCTGTGAGCAGGGGCTTGGACTCATACTaGATGCCGTACTTGGCGCACAGGGATTGTACTAGG | + |
|
Preference number: 6 (lower is better) Translates to: SAKAVSRGLDSY*MPYLAHRDCTR Trigger: CCTAGTACAATCCCTGTGCGCCAAGTACGGCATCAAGTATGAGTCCAAGCCCCTGCTCACAGCCTTCGCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS CCA 72 bp | CTGATTGGTGAACGTTGCAGGTTGCCTGCAGCTGGGTaGAGACCCAGTCCACATTCCGGTCGTGATCAATGT | + |
|
Preference number: 6 (lower is better) Translates to: LIGERCRLPAAG*RPSPHSGRDQC Trigger: ACATTGATCACGACCGGAATGTGGACTGGGTCTCCACCCAGCTGCAGGCAACCTGCAACGTTCACCAATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 ENSMUST00000237861.2 |
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| CDS CCA 72 bp | GGGGTGCCACCTTGTGGTAGTTGTGCCGCGGCATGGTaGGGAAGAGGTGGTGTTCAATCTGGAAATTTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GVPPCGSCAAAW*GRGGVQSGNLG Trigger: ACCTAAATTTCCAGATTGAACACCACCTCTTCCCCACCATGCCGCGGCACAACTACCACAAGGTGGCACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS TCA 72 bp | CTATTGGTGAAGGTAAGCGTCCAACCAGAGTTGCCCTaGCTCCTTCAGGGAGTAAACAATGTCCGCGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLVKVSVQPELP*LLQGVNNVREG Trigger: GCCTTCGCGGACATTGTTTACTCCCTGAAGGAGTCAGGGCAACTCTGGTTGGACGCTTACCTTCACCAATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235160.2 |
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| CDS TCA 72 bp | GAAGAGAGTTCATATACTTTCTCACAAGACCCTTGTTaGTGTGGAATGCCACAAAAGGATCCGTGGCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: EESSYTFSQDPC*CGMPQKDPWHP Trigger: AGGATGCCACGGATCCTTTTGTGGCATTCCACATCAACAAGGGTCTTGTGAGAAAGTATATGAACTCTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235515.2 |
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| CDS CAA 72 bp | ATCAGAAGAGAGTTCATATACTTTCTCACAAGACCCTaGTTGATGTGGAATGCCACAAAAGGATCCGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: IRREFIYFLTRP*LMWNATKGSVA Trigger: TGCCACGGATCCTTTTGTGGCATTCCACATCAACAAGGGTCTTGTGAGAAAGTATATGAACTCTCTTCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010807.6 ENSMUST00000235515.2 |
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