Pregenerated sensors for FADD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031077Ensembl transcript IDs: ENSMUST00000033394.8
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGGACCAACAATGCGGAAGGCGATTGAGGAGAGTTCAAGTGTGCTaGGGGGTCAGCTGTCTGGTGGATAGGTGGAGCAGGGAGCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: RDQQCGRRLRRVQVC*GVSCLVDRWSREQE Trigger: TTCCTGCTCCCTGCTCCACCTATCCACCAGACAGCTGACCCCTCAGCACACTTGAACTCTCCTCAATCGCCTTCCGCATTGTTGGTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR GCA 90 bp | CTTTGGGAGTCTGGGAGCCATAGACCTCCACATGCATGCCTACCATaGTGTCCTGTTCTAGCCACACCTAAAACACTCCAGCCCTCTCAC | + |
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Preference number: 1 (lower is better) Translates to: LWESGSHRPPHACLP*CPVLATPKTLQPSH Trigger: GTGAGAGGGCTGGAGTGTTTTAGGTGTGGCTAGAACAGGACAGCATGGTAGGCATGCATGTGGAGGTCTATGGCTCCCAGACTCCCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR CCA 90 bp | AGATGGAGCAATGCTGAGCTGAAGAACATGGTAGGCTTGAGGCTGTaGAGGAGGGTGCAACCCAAGGAATGCAGGAGGGACCAACAATGC | + |
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Preference number: 1 (lower is better) Translates to: RWSNAELKNMVGLRL*RRVQPKECRRDQQC Trigger: GCATTGTTGGTCCCTCCTGCATTCCTTGGGTTGCACCCTCCTCCACAGCCTCAAGCCTACCATGTTCTTCAGCTCAGCATTGCTCCATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR GCA 90 bp | CCATTCAGGCTTTGGGAGTCTGGGAGCCATAGACCTCCACATGCATaGCTACCATGCTGTCCTGTTCTAGCCACACCTAAAACACTCCAG | + |
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Preference number: 1 (lower is better) Translates to: PFRLWESGSHRPPHA*LPCCPVLATPKTLQ Trigger: CTGGAGTGTTTTAGGTGTGGCTAGAACAGGACAGCATGGTAGGCATGCATGTGGAGGTCTATGGCTCCCAGACTCCCAAAGCCTGAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR GCA 90 bp | GAGCTGAGGAGTGAAGAGCAGGCAAGGAGAGTCACCTGTGAGCTGTaGAGCTCTGACAAGCCTTTATTAGCAGCAGGAGGAATTGATGCT | + |
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Preference number: 1 (lower is better) Translates to: ELRSEEQARRVTCEL*SSDKPLLAAGGIDA Trigger: AGCATCAATTCCTCCTGCTGCTAATAAAGGCTTGTCAGAGCTGCACAGCTCACAGGTGACTCTCCTTGCCTGCTCTTCACTCCTCAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR CCA 90 bp | GGTATGTATTATCACACCCAGCCAAAGGTTAGAAAGCTGAGACAATaGTTTATTGGGCTCCAAGTGTGGCAGTCAGGGCCCCTGCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: GMYYHTQPKVRKLRQ*FIGLQVWQSGPLLV Trigger: CACCAGCAGGGGCCCTGACTGCCACACTTGGAGCCCAATAAACCATTGTCTCAGCTTTCTAACCTTTGGCTGGGTGTGATAATACATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR TCA 90 bp | GGATCAAAGGTATGTATTATCACACCCAGCCAAAGGTTAGAAAGCTaGGACAATGGTTTATTGGGCTCCAAGTGTGGCAGTCAGGGCCCC | + |
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Preference number: 1 (lower is better) Translates to: GSKVCIITPSQRLES*DNGLLGSKCGSQGP Trigger: GGGGCCCTGACTGCCACACTTGGAGCCCAATAAACCATTGTCTCAGCTTTCTAACCTTTGGCTGGGTGTGATAATACATACCTTTGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR CCA 90 bp | GGTCACTTCAGTTACACTCAGCTTGAGGCCAACCTAGGTTACATCTaGGCTACAAGAAACCGTGTCTTAAACCCTTCAAACTGGAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: GHFSYTQLEANLGYI*ATRNRVLNPSNWRK Trigger: CTTTCTCCAGTTTGAAGGGTTTAAGACACGGTTTCTTGTAGCCCAGATGTAACCTAGGTTGGCCTCAAGCTGAGTGTAACTGAAGTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGGCCCATGGCCTATGGTGGATGCATCACACATTCCATCACATCATGTCCCAACACGCCGGGCGTGGTaGCGCACGCCTTTGATCCCA | + |
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Preference number: 2 (lower is better) Translates to: GGPWPMVDASHIPSHHVPTRRAW*RTPLIP Trigger: TGGGATCAAAGGCGTGCGTCACCACGCCCGGCGTGT...TGGGACATGATGTGATGGAATGTGTGATGCATCCACCATAGGCCATGGGCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCACTTGCTTACAGACCACCATGGAGGCAAGGTGCTACCCTTTAAACCACAGGGGGAGGAGCAGTGGTaGAGAACACGACGGGGAACC | + |
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Preference number: 2 (lower is better) Translates to: GHLLTDHHGGKVLPFKPQGEEQW*RTRRGT Trigger: GGTTCCCCGTCGTGTTCTCCACCACTGCTCCTCCCC...CTGTGGTTTAAAGGGTAGCACCTTGCCTCCATGGTGGTCTGTAAGCAAGTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGAGGAGGGTGCAACCCAAGGAATGCAGGAGGGACCAACAATGCGGAAGGGTACAGGCCCCAGGCTaGTCACTTGAAGTCCACATT | + |
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Preference number: 2 (lower is better) Translates to: LWRRVQPKECRRDQQCGRVQAPG*SLEVHI Trigger: AATGTGGACTTCAAGTGACCAGCCTGGGGCCTGTAC...CCTTCCGCATTGTTGGTCCCTCCTGCATTCCTTGGGTTGCACCCTCCTCCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGGCCCATGGCCTATGGTGGATGCATCACACATTCCATCACATCATGTCCCAACACCTCAGTCAGCCTaGTGGGAGGGATTTCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: GGPWPMVDASHIPSHHVPTPQSA*WEGFLR Trigger: CCTCAGAAATCCCTCCCATCAGGCTGACTGAGGTGT...TGGGACATGATGTGATGGAATGTGTGATGCATCCACCATAGGCCATGGGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGGCCCATGGCCTATGGTGGATGCATCACACATTCCATCACATCATGTCCCAAAGCCCATCGACCTGTaGCTTGCCACAGGACAGTTA | + |
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Preference number: 2 (lower is better) Translates to: GGPWPMVDASHIPSHHVPKPIDL*LATGQL Trigger: TAACTGTCCTGTGGCAAGTCACAGGTCGATGGGCTT...TGGGACATGATGTGATGGAATGTGTGATGCATCCACCATAGGCCATGGGCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR CCA 90 bp | GACACAAGTTATCTCCAGGTAAAGGCACTTGCTTTTGTGTGTTTGGGGAGAACATACTCCAGGAGCTGGTaGGAGGGGACCCGCCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: DTSYLQVKALAFVCLGRTYSRSW*EGTRPG Trigger: TCCAGGGCGGGTCCCCTCCCACCAGCTCCTGGAGTA...TGTTCTCCCCAAACACACAAAAGCAAGTGCCTTTACCTGGAGATAACTTGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR CAA 90 bp | GCCCTGGATCAGCAAGGTCTTTTTGGCACTGGGCACAAAAGGCACTaGGTGCTACATCATGGTGTGATCAAGTCCACAGTGACTCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: ALDQQGLFGTGHKRH*VLHHGVIKSTVTPE Trigger: CTCAGGAGTCACTGTGGACTTGATCACACCATGATGTAGCACCAAGTGCCTTTTGTGCCCAGTGCCAAAAAGACCTTGCTGATCCAGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR TCA 90 bp | GCCACACCTAAAACACTCCAGCCCTCTCACTTGGCTTTGGCTGAGCAAAGCCTTTCCCATCGTCTAATTTaGAACACAGCTCACACTGGG | + |
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Preference number: 2 (lower is better) Translates to: ATPKTLQPSHLALAEQSLSHRLI*NTAHTG Trigger: CCCAGTGTGAGCTGTGTTTCAAATTAGACGATGGGA...AAGGCTTTGCTCAGCCAAAGCCAAGTGAGAGGGCTGGAGTGTTTTAGGTGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR CCA 90 bp | GCCACACCTAAAACACTCCAGCCCTCTCACTTGGCTTTGGCTGAGCAAAGCCTTTCAGCAAGGTCTTTTTaGCACTGGGCACAAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: ATPKTLQPSHLALAEQSLSARSF*HWAQKA Trigger: TGCCTTTTGTGCCCAGTGCCAAAAAGACCTTGCTGA...AAGGCTTTGCTCAGCCAAAGCCAAGTGAGAGGGCTGGAGTGTTTTAGGTGTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR CCA 90 bp | GCCACACCTAAAACACTCCAGCCCTCTCACTTGGCTTTGGCTGAGCAAAGCCTTCAGCCAGGTGAGAAATaGGGTCAGAGAAAACAGGAT | + |
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Preference number: 2 (lower is better) Translates to: ATPKTLQPSHLALAEQSLQPGEK*GQRKQD Trigger: ATCCTGTTTTCTCTGACCCCATTTCTCACCTGGCTG...AAGGCTTTGCTCAGCCAAAGCCAAGTGAGAGGGCTGGAGTGTTTTAGGTGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGTCCTTGAACTCATAGATCACAGAGATCCACCTGCTTCCACCTCCCTAAAAGCTTACAGACCACCATaGAGGCAAGGTGCTACCCTT | + |
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Preference number: 2 (lower is better) Translates to: AVLELIDHRDPPASTSLKAYRPP*RQGATL Trigger: AAGGGTAGCACCTTGCCTCCATGGTGGTCTGTAAGC...TTTTAGGGAGGTGGAAGCAGGTGGATCTCTGTGATCTATGAGTTCAAGGACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR GCA 90 bp | GACACAAGTTATCTCCAGGTAAAGGCACTTGCTTTTGTGTGTTTGGGGAGAACATCCTCACAGGGGTCTTaGACTTGTTTGAGGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: DTSYLQVKALAFVCLGRTSSQGS*TCLRVG Trigger: CCCCACCCTCAAACAAGTGCAAGACCCCTGTGAGGA...TGTTCTCCCCAAACACACAAAAGCAAGTGCCTTTACCTGGAGATAACTTGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR CCA 90 bp | GAATTTGAACAAACAGCCAGATGGAGCAATGCTGAGCTGAAGAACATGGTAGGCTGTCTGGTGGATAGGTaGAGCAGGGAGCAGGAAATG | + |
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Preference number: 2 (lower is better) Translates to: EFEQTARWSNAELKNMVGCLVDR*SREQEM Trigger: CATTTCCTGCTCCCTGCTCCACCTATCCACCAGACA...GCCTACCATGTTCTTCAGCTCAGCATTGCTCCATCTGGCTGTTTGTTCAAATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR CCA 90 bp | GCCACACCTAAAACACTCCAGCCCTCTCACTTGGCTTTGGCTGAGCAAAGCCTTTCTGGAGAGCCATTTTaGATTCCTGAGCTGTACAAA | + |
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Preference number: 2 (lower is better) Translates to: ATPKTLQPSHLALAEQSLSGEPF*IPELYK Trigger: TTTGTACAGCTCAGGAATCCAAAATGGCTCTCCAGA...AAGGCTTTGCTCAGCCAAAGCCAAGTGAGAGGGCTGGAGTGTTTTAGGTGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGTCCTTGAACTCATAGATCACAGAGATCCACCTGCTTCCACCTCCCTAAAATGCAGTCAGCACATGTaGCATCAGCTTCAACTTCCT | + |
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Preference number: 2 (lower is better) Translates to: AVLELIDHRDPPASTSLKCSQHM*HQLQLP Trigger: AGGAAGTTGAAGCTGATGGCACATGTGCTGACTGCA...TTTTAGGGAGGTGGAAGCAGGTGGATCTCTGTGATCTATGAGTTCAAGGACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAACTGCAGTCAGCACATGTGCCATCAGCTTCAACTTCCTTCTTGCAAGACCCTTGGTGCTACATCATaGTGTGATCAAGTCCACAGT | + |
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Preference number: 2 (lower is better) Translates to: SNCSQHMCHQLQLPSCKTLGATS*CDQVHS Trigger: ACTGTGGACTTGATCACACCATGATGTAGCACCAAG...GGTCTTGCAAGAAGGAAGTTGAAGCTGATGGCACATGTGCTGACTGCAGTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR TCA 90 bp | GAATTTGAACAAACAGCCAGATGGAGCAATGCTGAGCTGAAGAACATGGTAGGCATTAGGTTAGGACAGTaGGGTACAGCTCTTCACTCT | + |
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Preference number: 2 (lower is better) Translates to: EFEQTARWSNAELKNMVGIRLGQ*GTALHS Trigger: AGAGTGAAGAGCTGTACCTCACTGTCCTAACCTAAT...GCCTACCATGTTCTTCAGCTCAGCATTGCTCCATCTGGCTGTTTGTTCAAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR GCA 90 bp | GAATTTGAACAAACAGCCAGATGGAGCAATGCTGAGCTGAAGAACATGGTAGGCCTTCAACTTCCTTCTTaGAAGACCAGAGACCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: EFEQTARWSNAELKNMVGLQLPS*KTRDLL Trigger: CAAGAGGTCTCTGGTCTTGCAAGAAGGAAGTTGAAG...GCCTACCATGTTCTTCAGCTCAGCATTGCTCCATCTGGCTGTTTGTTCAAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTACAAGAAACCGTGTCTTAAACCCTTCAAACTGGAGAAAGGGGGAGGGGTAAATAGAAATTCTTGGTaGCACAAGTTATCTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: GYKKPCLKPFKLEKGGGVNRNSW*HKLSPG Trigger: ACCTGGAGATAACTTGTGTCACCAAGAATTTCTATT...TACCCCTCCCCCTTTCTCCAGTTTGAAGGGTTTAAGACACGGTTTCTTGTAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR CAA 90 bp | TCTAGTGTTGAGATCACAGGCATAAGACAGTATGCTCATCAAATTTaGATGGACAGGGAGCAGACCTCATCTTTACAGTCCATTCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: SSVEITGIRQYAHQI*MDREQTSSLQSIQA Trigger: AGCCTGAATGGACTGTAAAGATGAGGTCTGCTCCCTGTCCATCAAAATTTGATGAGCATACTGTCTTATGCCTGTGATCTCAACACTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR CCA 72 bp | ACAGGCGGGTCTGTGGTTCCAACGCTTGGTAAAGGATaGGTAGGAGCCAAGACCCTGATGGGAGCTGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: TGGSVVPTLGKG*VGAKTLMGAEE Trigger: CTCCTCAGCTCCCATCAGGGTCTTGGCTCCTACCCATCCTTTACCAAGCGTTGGAACCACAGACCCGCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR CCA 72 bp | GATGCTGAGGTGTTCAGGGCAAAACTGGGCACAAGTTaGGGAGATGCAGAGATGTGTGGGGTGCTCACCCTG | + |
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Preference number: 3 (lower is better) Translates to: DAEVFRAKLGTS*GDAEMCGVLTL Trigger: CAGGGTGAGCACCCCACACATCTCTGCATCTCCCCAACTTGTGCCCAGTTTTGCCCTGAACACCTCAGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR CAA 90 bp | AGGCCCATGGCCTATGGTGGATGCATCACACATTCCATCACATCATGTCCCATCGCAAGAGCAGTAGGGTaGCCCAGGCTTCCTAGCGCA | + |
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Preference number: 3 (lower is better) Translates to: RPMAYGGCITHSITSCPIARAVG*PRLPSA Trigger: TGCGCTAGGAAGCCTGGGCAACCCTACTGCTCTTGC...GATGGGACATGATGTGATGGAATGTGTGATGCATCCACCATAGGCCATGGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR TCA 72 bp | AGGAATGCAGGAGGGACCAACAATGCGGAAGGCGATTaGGGAGAGTTCAAGTGTGCTGAGGGGTCAGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: RNAGGTNNAEGD*GEFKCAEGSAV Trigger: GACAGCTGACCCCTCAGCACACTTGAACTCTCCTCAATCGCCTTCCGCATTGTTGGTCCCTCCTGCATTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR GCA 72 bp | GGGCTTCCCGAATCTCCCAGAAAACCAGCACTGTTTTaGATCAGCTACTGGAGGCCCATGGCCTATGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: GLPESPRKPALF*ISYWRPMAYGG Trigger: TCCACCATAGGCCATGGGCCTCCAGTAGCTGATGCAAAACAGTGCTGGTTTTCTGGGAGATTCGGGAAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR CCA 72 bp | AATGCTGAGCTGAAGAACATGGTAGGCTTGAGGCTGTaGAGGAGGGTGCAACCCAAGGAATGCAGGAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: NAELKNMVGLRL*RRVQPKECRRD Trigger: GTCCCTCCTGCATTCCTTGGGTTGCACCCTCCTCCACAGCCTCAAGCCTACCATGTTCTTCAGCTCAGCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR CCA 72 bp | CAGGAGGAATTGATGCTGAGGTGTTCAGGGCAAAACTaGGCACAAGTTGGGGAGATGCAGAGATGTGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: QEELMLRCSGQN*AQVGEMQRCVG Trigger: CCCCACACATCTCTGCATCTCCCCAACTTGTGCCCAGTTTTGCCCTGAACACCTCAGCATCAATTCCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR CCA 72 bp | GGGAGCAGACCTCATCTTTACAGTCCATTCAGGCTTTaGGAGTCTGGGAGCCATAGACCTCCACATGCATGC | + |
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Preference number: 3 (lower is better) Translates to: GSRPHLYSPFRL*ESGSHRPPHAC Trigger: GCATGCATGTGGAGGTCTATGGCTCCCAGACTCCCAAAGCCTGAATGGACTGTAAAGATGAGGTCTGCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR TCA 72 bp | CTAGCACCCAGGGCTGTAAGCACACCTCAGTCAGCCTaGTGGGAGGGATTTCTGAGGTTAGAAGGGTTCTTA | + |
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Preference number: 3 (lower is better) Translates to: LAPRAVSTPQSA*WEGFLRLEGFL Trigger: TAAGAACCCTTCTAACCTCAGAAATCCCTCCCATCAGGCTGACTGAGGTGTGCTTACAGCCCTGGGTGCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR GCA 72 bp | GGTTTATTGGGCTCCAAGTGTGGCAGTCAGGGCCCCTaGTGGTGTGAAGGAAATCACATCACTCCATTCACA | + |
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Preference number: 3 (lower is better) Translates to: GLLGSKCGSQGP*WCEGNHITPFT Trigger: TGTGAATGGAGTGATGTGATTTCCTTCACACCAGCAGGGGCCCTGACTGCCACACTTGGAGCCCAATAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR GCA 72 bp | AGTGAAGAGCAGGCAAGGAGAGTCACCTGTGAGCTGTaGAGCTCTGACAAGCCTTTATTAGCAGCAGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: SEEQARRVTCEL*SSDKPLLAAGG Trigger: TCCTCCTGCTGCTAATAAAGGCTTGTCAGAGCTGCACAGCTCACAGGTGACTCTCCTTGCCTGCTCTTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR GCA 72 bp | TGCATCAGCTACTGGAGGCCCATGGCCTATGGTGGATaGATCACACATTCCATCACATCATGTCCCATCGTC | + |
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Preference number: 3 (lower is better) Translates to: CISYWRPMAYGG*ITHSITSCPIV Trigger: GACGATGGGACATGATGTGATGGAATGTGTGATGCATCCACCATAGGCCATGGGCCTCCAGTAGCTGATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR GCA 72 bp | TCTGGGAGCCATAGACCTCCACATGCATGCCTACCATaGTGTCCTGTTCTAGCCACACCTAAAACACTCCAG | + |
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Preference number: 3 (lower is better) Translates to: SGSHRPPHACLP*CPVLATPKTLQ Trigger: CTGGAGTGTTTTAGGTGTGGCTAGAACAGGACAGCATGGTAGGCATGCATGTGGAGGTCTATGGCTCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR GCA 72 bp | CTTTGGGAGTCTGGGAGCCATAGACCTCCACATGCATaGCTACCATGCTGTCCTGTTCTAGCCACACCTAAA | + |
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Preference number: 3 (lower is better) Translates to: LWESGSHRPPHA*LPCCPVLATPK Trigger: TTTAGGTGTGGCTAGAACAGGACAGCATGGTAGGCATGCATGTGGAGGTCTATGGCTCCCAGACTCCCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR CAA 90 bp | AGGCCCATGGCCTATGGTGGATGCATCACACATTCCATCACATCATGTCCCATCATCAGCAAGGTCTTTTaGGCACTGGGCACAAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: RPMAYGGCITHSITSCPIISKVF*ALGTKG Trigger: GCCTTTTGTGCCCAGTGCCAAAAAGACCTTGCTGAT...GATGGGACATGATGTGATGGAATGTGTGATGCATCCACCATAGGCCATGGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR CCA 72 bp | TCTCCCAGAAAACCAGCACTGTTTTGCATCAGCTACTaGAGGCCCATGGCCTATGGTGGATGCATCACACAT | + |
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Preference number: 3 (lower is better) Translates to: SPRKPALFCISY*RPMAYGGCITH Trigger: ATGTGTGATGCATCCACCATAGGCCATGGGCCTCCAGTAGCTGATGCAAAACAGTGCTGGTTTTCTGGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR TCA 72 bp | GGCTGGTCACTTGAAGTCCACATTAGGTTAGGACAGTaGGGTACAGCTCTTCACTCTGTCAGGAGAACCTGT | + |
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Preference number: 3 (lower is better) Translates to: GWSLEVHIRLGQ*GTALHSVRRTC Trigger: ACAGGTTCTCCTGACAGAGTGAAGAGCTGTACCTCACTGTCCTAACCTAATGTGGACTTCAAGTGACCAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR GCA 72 bp | ACAGAGAACACCCACCAGACACCTTATACAGGCCTATaGATAGTCTGGGGAGTCAAGAGCATTGTGGCTACA | + |
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Preference number: 3 (lower is better) Translates to: TENTHQTPYTGL*IVWGVKSIVAT Trigger: TGTAGCCACAATGCTCTTGACTCCCCAGACTATGCATAGGCCTGTATAAGGTGTCTGGTGGGTGTTCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR CCA 72 bp | GTTTTGCATCAGCTACTGGAGGCCCATGGCCTATGGTaGATGCATCACACATTCCATCACATCATGTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: VLHQLLEAHGLW*MHHTFHHIMSH Trigger: ATGGGACATGATGTGATGGAATGTGTGATGCATCCACCATAGGCCATGGGCCTCCAGTAGCTGATGCAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR CCA 72 bp | ACTGTTTTGCATCAGCTACTGGAGGCCCATGGCCTATaGTGGATGCATCACACATTCCATCACATCATGTCC | + |
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Preference number: 3 (lower is better) Translates to: TVLHQLLEAHGL*WMHHTFHHIMS Trigger: GGACATGATGTGATGGAATGTGTGATGCATCCACCATAGGCCATGGGCCTCCAGTAGCTGATGCAAAACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR CAA 90 bp | GAATTTGAACAAACAGCCAGATGGAGCAATGCTGAGCTGAAGAACATGGTAGGCGAGACAGATGTCCTCTaGGCCAACTGTAAGGCAACC | + |
|
Preference number: 3 (lower is better) Translates to: EFEQTARWSNAELKNMVGETDVL*ANCKAT Trigger: GGTTGCCTTACAGTTGGCCAAGAGGACATCTGTCTC...GCCTACCATGTTCTTCAGCTCAGCATTGCTCCATCTGGCTGTTTGTTCAAATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| 3UTR GCA 72 bp | ACAAGAAGAAGGCTCTCAAACTGCAGTCAGCACATGTaGCATCAGCTTCAACTTCCTTCTTGCAAGACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TRRRLSNCSQHM*HQLQLPSCKTR Trigger: TCTGGTCTTGCAAGAAGGAAGTTGAAGCTGATGGCACATGTGCTGACTGCAGTTTGAGAGCCTTCTTCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| 3UTR-3UTR CAA 90 bp | GACACAAGTTATCTCCAGGTAAAGGCACTTGCTTTTGTGTGTTTGGGGAGAACAGCTTCAACTTCCTTCTaGCAAGACCAGAGACCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: DTSYLQVKALAFVCLGRTASTSF*QDQRPL Trigger: AAGAGGTCTCTGGTCTTGCAAGAAGGAAGTTGAAGC...TGTTCTCCCCAAACACACAAAAGCAAGTGCCTTTACCTGGAGATAACTTGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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| 3UTR-3UTR CAA 90 bp | GCTGTCCTTGAACTCATAGATCACAGAGATCCACCTGCTTCCACCTCCCTAAAACTTGCTTTTGTGTGTTaGGGGAGAACATCTCATTTG | + |
|
Preference number: 3 (lower is better) Translates to: AVLELIDHRDPPASTSLKLAFVC*GRTSHL Trigger: CAAATGAGATGTTCTCCCCAAACACACAAAAGCAAG...TTTTAGGGAGGTGGAAGCAGGTGGATCTCTGTGATCTATGAGTTCAAGGACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| 3UTR CCA 72 bp | GTGAGGTACAGCTCTTCACTCTGTCAGGAGAACCTGTaGCTAAGATCCTCTTCTCCAGACATGAACTTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: VRYSSSLCQENL*LRSSSPDMNFY Trigger: ATAAAAGTTCATGTCTGGAGAAGAGGATCTTAGCCACAGGTTCTCCTGACAGAGTGAAGAGCTGTACCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| 3UTR CCA 72 bp | AGTTACACTCAGCTTGAGGCCAACCTAGGTTACATCTaGGCTACAAGAAACCGTGTCTTAAACCCTTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SYTQLEANLGYI*ATRNRVLNPSN Trigger: GTTTGAAGGGTTTAAGACACGGTTTCTTGTAGCCCAGATGTAACCTAGGTTGGCCTCAAGCTGAGTGTAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGCAGTCAGGGCCCCTGCTGGTGTGAAGGAAATCACATCACTCCATTCACACGCAGCAGCCCGGTGTaGCCGCGCTCCAGGTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CGSQGPCWCEGNHITPFTRSSPV*PRSRSF Trigger: GAACGACCTGGAGCGCGGGCACACCGGGCTGCTGCG...TGTGAATGGAGTGATGTGATTTCCTTCACACCAGCAGGGGCCCTGACTGCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS-3UTR GCA 90 bp | CTATATGTAGGTAGGCCCAGGGCACTTGCTTACAGACCACCATGGAGGCAAGGTCGCTCCAGGTCGTTCTaGTCCAGCAGCACCGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LYVGRPRALAYRPPWRQGRSRSF*SSSTVN Trigger: GTTCACGGTGCTGCTGGAGCAGAACGACCTGGAGCG...ACCTTGCCTCCATGGTGGTCTGTAAGCAAGTGCCCTGGGCCTACCTACATATAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS-3UTR GCA 90 bp | GGCTACAAGAAACCGTGTCTTAAACCCTTCAAACTGGAGAAAGGGGGAGGGGTACTGCCGGACAGCGAGTaGAGCAGCACCAGGAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GYKKPCLKPFKLEKGGGVLPDSE*SSTRNG Trigger: CCCATTCCTGGTGCTGCTGCACTCGCTGTCCGGCAG...TACCCCTCCCCCTTTCTCCAGTTTGAAGGGTTTAAGACACGGTTTCTTGTAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS-3UTR GCA 90 bp | TCAAACTGCAGTCAGCACATGTGCCATCAGCTTCAACTTCCTTCTTGCAAGACCCGTTGCCCGACAGGCTaGCGGACAGCGAGTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SNCSQHMCHQLQLPSCKTRCPTG*RTASAA Trigger: TGCTGCACTCGCTGTCCGGCAGCCTGTCGGGCAACG...GGTCTTGCAAGAAGGAAGTTGAAGCTGATGGCACATGTGCTGACTGCAGTTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCCATGGCCTATGGTGGATGCATCACACATTCCATCACATCATGTCCCATCAGGTCCAGGCCACTCTaGACGCGCTCCAGCTTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RPMAYGGCITHSITSCPIRSRPL*TRSSFR Trigger: ACGAAAGCTGGAGCGCGTGCAGAGTGGCCTGGACCT...GATGGGACATGATGTGATGGAATGTGTGATGCATCCACCATAGGCCATGGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGCAGTCAGGGCCCCTGCTGGTGTGAAGGAAATCACATCACTCCATTCACAATGTCAAATGCCACCTaGAGATCTGCCTCCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CGSQGPCWCEGNHITPFTMSNAT*RSASPG Trigger: CCCGGGGGAGGCAGATCTGCAGGTGGCATTTGACAT...TGTGAATGGAGTGATGTGATTTCCTTCACACCAGCAGGGGCCCTGACTGCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| 3UTR CAA 72 bp | TGGGCTTCCCGAATCTCCCAGAAAACCAGCACTGTTTaGCATCAGCTACTGGAGGCCCATGGCCTATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WASRISQKTSTV*HQLLEAHGLWW Trigger: CCACCATAGGCCATGGGCCTCCAGTAGCTGATGCAAAACAGTGCTGGTTTTCTGGGAGATTCGGGAAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGACAATGGTTTATTGGGCTCCAAGTGTGGCAGTCAGGGCCCCTGCTGGTGCAATCCCATCCATCTTaGCCTCAGACACCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRQWFIGLQVWQSGPLLVQSHPS*PQTPSA Trigger: AGCTGAAGGTGTCTGAGGCCAAGATGGATGGGATTG...CACCAGCAGGGGCCCTGACTGCCACACTTGGAGCCCAATAAACCATTGTCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| 3UTR CAA 72 bp | AGATGGAGCAATGCTGAGCTGAAGAACATGGTAGGCTaGAGGCTGTGGAGGAGGGTGCAACCCAAGGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: RWSNAELKNMVG*RLWRRVQPKEC Trigger: GCATTCCTTGGGTTGCACCCTCCTCCACAGCCTCAAGCCTACCATGTTCTTCAGCTCAGCATTGCTCCATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| 3UTR CAA 72 bp | GCCACACCTAAAACACTCCAGCCCTCTCACTTGGCTTaGGCTGAGCAAAGCCTTGGTGACAATGAGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ATPKTLQPSHLA*AEQSLGDNESH Trigger: ATGGGACTCATTGTCACCAAGGCTTTGCTCAGCCAAAGCCAAGTGAGAGGGCTGGAGTGTTTTAGGTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGCCCATGGCCTATGGTGGATGCATCACACATTCCATCACATCATGTCCCATTGCTCACAGATTCCTaGGCTTCTTCCACCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGPWPMVDASHIPSHHVPLLTDS*ASSTRS Trigger: TGACCTGGTGGAAGAAGCCCAGGAATCTGTGAGCAA...TGGGACATGATGTGATGGAATGTGTGATGCATCCACCATAGGCCATGGGCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCCATGGCCTATGGTGGATGCATCACACATTCCATCACATCATGTCCCATCACACACAATGTCAAATaGCACCTGCAGATCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RPMAYGGCITHSITSCPITHNVK*HLQICL Trigger: GAGGCAGATCTGCAGGTGGCATTTGACATTGTGTGT...GATGGGACATGATGTGATGGAATGTGTGATGCATCCACCATAGGCCATGGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| 3UTR CAA 72 bp | CAGCAAGGTCTTTTTGGCACTGGGCACAAAAGGCACTaGGTGCTACATCATGGTGTGATCAAGTCCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QQGLFGTGHKRH*VLHHGVIKSTV Trigger: CACTGTGGACTTGATCACACCATGATGTAGCACCAAGTGCCTTTTGTGCCCAGTGCCAAAAAGACCTTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| 3UTR CAA 72 bp | TCACACATTCCATCACATCATGTCCCATCGTCTAATTaGAAACACAGCTCACACTGGGACCTTGTGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHIPSHHVPSSN*KHSSHWDLVTR Trigger: TCTGGTCACAAGGTCCCAGTGTGAGCTGTGTTTCAAATTAGACGATGGGACATGATGTGATGGAATGTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS-3UTR GCA 90 bp | GAATTTGAACAAACAGCCAGATGGAGCAATGCTGAGCTGAAGAACATGGTAGGCACATATTCTCACTCTTaGTCACAGATTCCTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EFEQTARWSNAELKNMVGTYSHS*SQIPGL Trigger: AAGCCCAGGAATCTGTGAGCAAGAGTGAGAATATGT...GCCTACCATGTTCTTCAGCTCAGCATTGCTCCATCTGGCTGTTTGTTCAAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| 3UTR CAA 72 bp | GGAATCCTATTCCTACCTAAATATGCAGTGTGGCTTTaGTATTGGCAGTGGGGTCAAGGGGTTGTTGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: GILFLPKYAVWL*YWQWGQGVVEI Trigger: TATCTCAACAACCCCTTGACCCCACTGCCAATACAAAAGCCACACTGCATATTTAGGTAGGAATAGGATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS GCA 90 bp | TCGTGTCGGCGCAGCGAGGCCAGCAACTCGCGCAGCAGCCCGGTGTaGCCGCGCTCCAGGTCGTTCTGCTCCAGCAGCACCGTGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCRRSEASNSRSSPV*PRSRSFCSSSTVNR Trigger: CCTGTTCACGGTGCTGCTGGAGCAGAACGACCTGGAGCGCGGGCACACCGGGCTGCTGCGCGAGTTGCTGGCCTCGCTGCGCCGACACGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS GCA 90 bp | AGCAACTCGCGCAGCAGCCCGGTGTGCCCGCGCTCCAGGTCGTTCTaGTCCAGCAGCACCGTGAACAGGTCCAGGCCACTCTGCACGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SNSRSSPVCPRSRSF*SSSTVNRSRPLCTR Trigger: GCGCGTGCAGAGTGGCCTGGACCTGTTCACGGTGCTGCTGGAGCAGAACGACCTGGAGCGCGGGCACACCGGGCTGCTGCGCGAGTTGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS TCA 90 bp | GCCCGGTGTGCCCGCGCTCCAGGTCGTTCTGCTCCAGCAGCACCGTaGACAGGTCCAGGCCACTCTGCACGCGCTCCAGCTTTCGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ARCARAPGRSAPAAP*TGPGHSARAPAFVC Trigger: GCAAACGAAAGCTGGAGCGCGTGCAGAGTGGCCTGGACCTGTTCACGGTGCTGCTGGAGCAGAACGACCTGGAGCGCGGGCACACCGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS GCA 90 bp | AGGTCGTTCTGCTCCAGCAGCACCGTGAACAGGTCCAGGCCACTCTaGACGCGCTCCAGCTTTCGTTTGCTCACGCGCTCGCGGCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: RSFCSSSTVNRSRPL*TRSSFRLLTRSRHK Trigger: CTTGTGCCGCGAGCGCGTGAGCAAACGAAAGCTGGAGCGCGTGCAGAGTGGCCTGGACCTGTTCACGGTGCTGCTGGAGCAGAACGACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS TCA 90 bp | CGCGCTCCAGCTTTCGTTTGCTCACGCGCTCGCGGCACAAGAACTTaGGCTCCATCAGATCGTTGCCCGACAGGCTGCCGGACAGCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RAPAFVCSRARGTRT*APSDRCPTGCRTAS Trigger: ACTCGCTGTCCGGCAGCCTGTCGGGCAACGATCTGATGGAGCTCAAGTTCTTGTGCCGCGAGCGCGTGAGCAAACGAAAGCTGGAGCGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTTGGGGAGAACATCTCATTTGTAGCTCAGGCTGCTGTAAAGTGCAGTTCTCGCTCCAGCTTTCGTTaGCTCACGCGCTCGCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VFGENISFVAQAAVKCSSRSSFR*LTRSRH Trigger: GTGCCGCGAGCGCGTGAGCAAACGAAAGCTGGAGCG...AGAACTGCACTTTACAGCAGCCTGAGCTACAAATGAGATGTTCTCCCCAAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS-3UTR CAA 90 bp | CTATATGTAGGTAGGCCCAGGGCACTTGCTTACAGACCACCATGGAGGCAAGGTTCAATCCCATCCATCTaGGCCTCAGACACCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LYVGRPRALAYRPPWRQGSIPSI*ASDTFS Trigger: GCTGAAGGTGTCTGAGGCCAAGATGGATGGGATTGA...ACCTTGCCTCCATGGTGGTCTGTAAGCAAGTGCCCTGGGCCTACCTACATATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCCATGGCCTATGGTGGATGCATCACACATTCCATCACATCATGTCCCATCCTGAGGAAGACACAGTaGAATCCCTTAGTACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RPMAYGGCITHSITSCPILRKTQ*NPLVLG Trigger: CCCCAGTACTAAGGGATTCAACTGTGTCTTCCTCAG...GATGGGACATGATGTGATGGAATGTGTGATGCATCCACCATAGGCCATGGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS-3UTR CAA 90 bp | GAATTTGAACAAACAGCCAGATGGAGCAATGCTGAGCTGAAGAACATGGTAGGCTCGCGGCACAAGAACTaGAGCTCCATCAGATCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: EFEQTARWSNAELKNMVGSRHKN*SSIRSL Trigger: CAACGATCTGATGGAGCTCAAGTTCTTGTGCCGCGA...GCCTACCATGTTCTTCAGCTCAGCATTGCTCCATCTGGCTGTTTGTTCAAATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS TCA 72 bp | GCCCGCGCTCCAGGTCGTTCTGCTCCAGCAGCACCGTaGACAGGTCCAGGCCACTCTGCACGCGCTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ARAPGRSAPAAP*TGPGHSARAPA Trigger: AGCTGGAGCGCGTGCAGAGTGGCCTGGACCTGTTCACGGTGCTGCTGGAGCAGAACGACCTGGAGCGCGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS GCA 72 bp | TGCTCCAGCAGCACCGTGAACAGGTCCAGGCCACTCTaGACGCGCTCCAGCTTTCGTTTGCTCACGCGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: CSSSTVNRSRPL*TRSSFRLLTRS Trigger: CGAGCGCGTGAGCAAACGAAAGCTGGAGCGCGTGCAGAGTGGCCTGGACCTGTTCACGGTGCTGCTGGAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS CAA 72 bp | CGCTCGCGGCACAAGAACTTGAGCTCCATCAGATCGTaGCCCGACAGGCTGCCGGACAGCGAGTGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RSRHKNLSSIRS*PDRLPDSECSS Trigger: GCTGCTGCACTCGCTGTCCGGCAGCCTGTCGGGCAACGATCTGATGGAGCTCAAGTTCTTGTGCCGCGAGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS CAA 90 bp | ACGCGCTCCAGCTTTCGTTTGCTCACGCGCTCGCGGCACAAGAACTaGAGCTCCATCAGATCGTTGCCCGACAGGCTGCCGGACAGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: TRSSFRLLTRSRHKN*SSIRSLPDRLPDSE Trigger: CTCGCTGTCCGGCAGCCTGTCGGGCAACGATCTGATGGAGCTCAAGTTCTTGTGCCGCGAGCGCGTGAGCAAACGAAAGCTGGAGCGCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS CAA 72 bp | AGGTCCAGGCCACTCTGCACGCGCTCCAGCTTTCGTTaGCTCACGCGCTCGCGGCACAAGAACTTGAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RSRPLCTRSSFR*LTRSRHKNLSS Trigger: GGAGCTCAAGTTCTTGTGCCGCGAGCGCGTGAGCAAACGAAAGCTGGAGCGCGTGCAGAGTGGCCTGGACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS CAA 90 bp | TTGCTCACGCGCTCGCGGCACAAGAACTTGAGCTCCATCAGATCGTaGCCCGACAGGCTGCCGGACAGCGAGTGCAGCAGCACCAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LLTRSRHKNLSSIRS*PDRLPDSECSSTRN Trigger: ATTCCTGGTGCTGCTGCACTCGCTGTCCGGCAGCCTGTCGGGCAACGATCTGATGGAGCTCAAGTTCTTGTGCCGCGAGCGCGTGAGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS CAA 90 bp | ACCGTGAACAGGTCCAGGCCACTCTGCACGCGCTCCAGCTTTCGTTaGCTCACGCGCTCGCGGCACAAGAACTTGAGCTCCATCAGATCG | + |
|
Preference number: 6 (lower is better) Translates to: TVNRSRPLCTRSSFR*LTRSRHKNLSSIRS Trigger: CGATCTGATGGAGCTCAAGTTCTTGTGCCGCGAGCGCGTGAGCAAACGAAAGCTGGAGCGCGTGCAGAGTGGCCTGGACCTGTTCACGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS CAA 90 bp | GACACCTTCAGCTCGCGGGCCAGTCTTTTCCAGTCTCTCCCCACATaGTCACACACAATGTCAAATGCCACCTGCAGATCTGCCTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: DTFSSRASLFQSLPT*SHTMSNATCRSASP Trigger: GGGGGAGGCAGATCTGCAGGTGGCATTTGACATTGTGTGTGACAATGTGGGGAGAGACTGGAAAAGACTGGCCCGCGAGCTGAAGGTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS CAA 90 bp | CGCTCACTCAGACTTCGGGGGTACTTCTCCTCAATCCCATCCATCTaGGCCTCAGACACCTTCAGCTCGCGGGCCAGTCTTTTCCAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSLRLRGYFSSIPSI*ASDTFSSRASLFQS Trigger: AGACTGGAAAAGACTGGCCCGCGAGCTGAAGGTGTCTGAGGCCAAGATGGATGGGATTGAGGAGAAGTACCCCCGAAGTCTGAGTGAGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS CAA 72 bp | AGACTTCGGGGGTACTTCTCCTCAATCCCATCCATCTaGGCCTCAGACACCTTCAGCTCGCGGGCCAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RLRGYFSSIPSI*ASDTFSSRASL Trigger: AAGACTGGCCCGCGAGCTGAAGGTGTCTGAGGCCAAGATGGATGGGATTGAGGAGAAGTACCCCCGAAGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS GCA 72 bp | TTGAATCCCTTAGTACTGGGGACATATTCTCACTCTTaGTCACAGATTCCTGGGCTTCTTCCACCAGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LNPLVLGTYSHS*SQIPGLLPPGQ Trigger: CTGACCTGGTGGAAGAAGCCCAGGAATCTGTGAGCAAGAGTGAGAATATGTCCCCAGTACTAAGGGATTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
||
| CDS CAA 72 bp | GTTGAATCCCTTAGTACTGGGGACATATTCTCACTCTaGCTCACAGATTCCTGGGCTTCTTCCACCAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VESLSTGDIFSL*LTDSWASSTRS Trigger: TGACCTGGTGGAAGAAGCCCAGGAATCTGTGAGCAAGAGTGAGAATATGTCCCCAGTACTAAGGGATTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033394.8 |
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