Pregenerated sensors for FABP9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027528Ensembl transcript IDs: ENSMUST00000029038.8, ENSMUST00000191678.6, ENSMUST00000193487.6
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCTTCTGCTCCGTGTTCCTGCATaGACTTCCTGCTTGGATGTC | + |
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Preference number: 4 (lower is better) Translates to: LSGKFFVVAKFLLVSTLLLRVPA*TSCLDV Trigger: GACATCCAAGCAGGAAGTGCATGCAGGAACACGGAG...CAGAAGGGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS-3UTR GCA 90 bp | CTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCTTCTCTCCGTGTTCCTGCATaGACTTCCTGCTTGGATGTC | + |
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Preference number: 4 (lower is better) Translates to: LERQVLCGGQVLAGVYPSLRVPA*TSCLDV Trigger: GACATCCAAGCAGGAAGTGCATGCAGGAACACGGAG...AGAAGGGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS-3UTR CCA 90 bp | CTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCTTCTCATGCACTTCCTGCTTaGATGTCCATCCTTTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LERQVLCGGQVLAGVYPSHALPA*MSILSP Trigger: TGGGGAAAGGATGGACATCCAAGCAGGAAGTGCATG...AGAAGGGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS-3UTR CCA 90 bp | TTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCTTCTGCATGCACTTCCTGCTTaGATGTCCATCCTTTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LSGKFFVVAKFLLVSTLLHALPA*MSILSP Trigger: TGGGGAAAGGATGGACATCCAAGCAGGAAGTGCATG...CAGAAGGGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS-3UTR TCA 90 bp | TTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCTTCTGATTCTTCCCCCAACTTaGAAGAGATCTCCGTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LSGKFFVVAKFLLVSTLLILPPT*KRSPCS Trigger: GGAACACGGAGATCTCTTTCAAGTTGGGGGAAGAAT...CAGAAGGGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS-3UTR TCA 90 bp | CTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCTTCTATTCTTCCCCCAACTTaGAAGAGATCTCCGTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LERQVLCGGQVLAGVYPSILPPT*KRSPCS Trigger: GGAACACGGAGATCTCTTTCAAGTTGGGGGAAGAAT...AGAAGGGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS-3UTR GCA 90 bp | CTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCTTCTAGATCAGTTTCCAGGTaGCTAAGAAGGGCTCAATCA | + |
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Preference number: 4 (lower is better) Translates to: LERQVLCGGQVLAGVYPSRSVSR*LRRAQS Trigger: TGATTGAGCCCTTCTTAGGCACCTGGAAACTGATCT...AGAAGGGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS-3UTR CCA 90 bp | GGCTTTCTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACTTGCCAAGCCATTTTTaGACCTGGATCATTGACCCA | + |
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Preference number: 4 (lower is better) Translates to: GFLERQVLCGGQVLAGVYLPSHF*TWIIDP Trigger: TGGGTCAATGATCCAGGTCCAAAAATGGCTTGGCAA...GTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAGAAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 |
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| CDS-3UTR CCA 90 bp | CTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCTTCTTTGCCAAGCCATTTTTaGACCTGGATCATTGACCCA | + |
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Preference number: 4 (lower is better) Translates to: LERQVLCGGQVLAGVYPSLPSHF*TWIIDP Trigger: TGGGTCAATGATCCAGGTCCAAAAATGGCTTGGCAA...AGAAGGGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 |
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| CDS-3UTR GCA 90 bp | TTCTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCTTAGATCAGTTTCCAGGTaGCTAAGAAGGGCTCAATCA | + |
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Preference number: 4 (lower is better) Translates to: FLSGKFFVVAKFLLVSTLRSVSR*LRRAQS Trigger: TGATTGAGCCCTTCTTAGGCACCTGGAAACTGATCT...AAGGGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS-3UTR GCA 90 bp | TTTCTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCTAGATCAGTTTCCAGGTaGCTAAGAAGGGCTCAATCA | + |
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Preference number: 4 (lower is better) Translates to: FLERQVLCGGQVLAGVYPRSVSR*LRRAQS Trigger: TGATTGAGCCCTTCTTAGGCACCTGGAAACTGATCT...AGGGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS-3UTR GCA 90 bp | GCTTTCTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCACTTTTCGGTTGTCTaGAGTGGTCTCTTCAAATTC | + |
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Preference number: 4 (lower is better) Translates to: AFLSGKFFVVAKFLLVSTHFSVV*SGLFKF Trigger: GAATTTGAAGAGACCACTGCAGACAACCGAAAAGTG...GGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAGAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS-3UTR GCA 90 bp | GGCTTTCTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCACTTTTCGGTTGTCTaGAGTGGTCTCTTCAAATTC | + |
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Preference number: 4 (lower is better) Translates to: GFLERQVLCGGQVLAGVYHFSVV*SGLFKF Trigger: GAATTTGAAGAGACCACTGCAGACAACCGAAAAGTG...GTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAGAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS-3UTR GCA 90 bp | CTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCTTCTCACTTTTCGGTTGTCTaGAGTGGTCTCTTCAAATTC | + |
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Preference number: 4 (lower is better) Translates to: LERQVLCGGQVLAGVYPSHFSVV*SGLFKF Trigger: GAATTTGAAGAGACCACTGCAGACAACCGAAAAGTG...AGAAGGGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS-3UTR GCA 90 bp | TTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCTTCTGCAACATTGTTCATGGTaGACTCCTTCACTTTTCGGT | + |
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Preference number: 4 (lower is better) Translates to: LSGKFFVVAKFLLVSTLLQHCSW*TPSLFG Trigger: ACCGAAAAGTGAAGGAGTGCACCATGAACAATGTTG...CAGAAGGGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193487.6 |
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| CDS-3UTR CCA 90 bp | TTCTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCTTTTCGGTTGTCTGCAGTaGTCTCTTCAAATTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: FLSGKFFVVAKFLLVSTLFGCLQ*SLQILP Trigger: GGGAAGAATTTGAAGAGACCACTGCAGACAACCGAA...AAGGGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS-3UTR CCA 90 bp | TTTCTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCTTTCGGTTGTCTGCAGTaGTCTCTTCAAATTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: FLERQVLCGGQVLAGVYPFGCLQ*SLQILP Trigger: GGGAAGAATTTGAAGAGACCACTGCAGACAACCGAA...AGGGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS-3UTR CCA 90 bp | TTCTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCTTAGCCATTTTTGGACCTaGATCATTGACCCACCTTCA | + |
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Preference number: 4 (lower is better) Translates to: FLSGKFFVVAKFLLVSTLSHFWT*IIDPPS Trigger: TGAAGGTGGGTCAATGATCCAGGTCCAAAAATGGCT...AAGGGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 |
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| CDS-3UTR CAA 90 bp | CTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCTTCTGCATGCACTTCCTGCTaGGATGTCCATCCTTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: LERQVLCGGQVLAGVYPSACTSC*DVHPFP Trigger: GGGGAAAGGATGGACATCCAAGCAGGAAGTGCATGC...AGAAGGGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS-3UTR CAA 90 bp | GGCTTTCTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACGCATGCACTTCCTGCTaGGATGTCCATCCTTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: GFLERQVLCGGQVLAGVYACTSC*DVHPFP Trigger: GGGGAAAGGATGGACATCCAAGCAGGAAGTGCATGC...GTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAGAAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS-3UTR CAA 90 bp | TTCTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCTTGCATGCACTTCCTGCTaGGATGTCCATCCTTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: FLSGKFFVVAKFLLVSTLACTSC*DVHPFP Trigger: GGGGAAAGGATGGACATCCAAGCAGGAAGTGCATGC...AAGGGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS-3UTR CAA 90 bp | TTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCTTCTGAATTCTTCCCCCAACTaGAAAGAGATCTCCGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: LSGKFFVVAKFLLVSTLLNSSPN*KEISVF Trigger: GAACACGGAGATCTCTTTCAAGTTGGGGGAAGAATT...CAGAAGGGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS-3UTR CAA 90 bp | GGCTTTCTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACAATTCTTCCCCCAACTaGAAAGAGATCTCCGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: GFLERQVLCGGQVLAGVYNSSPN*KEISVF Trigger: GAACACGGAGATCTCTTTCAAGTTGGGGGAAGAATT...GTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAGAAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS CCA 90 bp | CCCAACTTGAAAGAGATCTCCGTGTTCCTGCATGCACTTCCTGCTTaGATGTCCATCCTTTCCCCATTGAAACTAATACTAACGCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: PNLKEISVFLHALPA*MSILSPLKLILTLG Trigger: GCCAAGCGTTAGTATTAGTTTCAATGGGGAAAGGATGGACATCCAAGCAGGAAGTGCATGCAGGAACACGGAGATCTCTTTCAAGTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS-3UTR CAA 90 bp | TTCTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCTTAATTCTTCCCCCAACTaGAAAGAGATCTCCGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: FLSGKFFVVAKFLLVSTLNSSPN*KEISVF Trigger: GAACACGGAGATCTCTTTCAAGTTGGGGGAAGAATT...AAGGGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS-3UTR CAA 90 bp | TTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCTTCTGTCCATCCTTTCCCCATaGAAACTAATACTAACGCTT | + |
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Preference number: 5 (lower is better) Translates to: LSGKFFVVAKFLLVSTLLSILSP*KLILTL Trigger: AAGCGTTAGTATTAGTTTCAATGGGGAAAGGATGGA...CAGAAGGGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS-3UTR CAA 90 bp | GCTTTCTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCTTAATTGTTGTCTGTTaGCCAAGCCATTTTTGGACC | + |
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Preference number: 5 (lower is better) Translates to: AFLSGKFFVVAKFLLVSTLIVVC*PSHFWT Trigger: GGTCCAAAAATGGCTTGGCAAACAGACAACAATTAA...GGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAGAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 |
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| CDS-3UTR CAA 90 bp | GGCTTTCTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACTTAATTGTTGTCTGTTaGCCAAGCCATTTTTGGACC | + |
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Preference number: 5 (lower is better) Translates to: GFLERQVLCGGQVLAGVYLIVVC*PSHFWT Trigger: GGTCCAAAAATGGCTTGGCAAACAGACAACAATTAA...GTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAGAAAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 |
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| CDS-3UTR CAA 90 bp | TTTCTTGAGCGGCAAGTTCTTTGTGGTGGCCAAGTTCTTGCTGGTGTCTACCCTTCCATCCTTTCCCCATaGAAACTAATACTAACGCTT | + |
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Preference number: 5 (lower is better) Translates to: FLERQVLCGGQVLAGVYPSILSP*KLILTL Trigger: AAGCGTTAGTATTAGTTTCAATGGGGAAAGGATGGA...AGGGTAGACACCAGCAAGAACTTGGCCACCACAAAGAACTTGCCGCTCAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS TCA 90 bp | TTTAATTGTTGTCTGTTTGCCAAGCCATTTTTGGACCTGGATCATTaGCCCACCTTCAAAGGTTATAAGGCTCTTCACTTTTCGGTTGTC | + |
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Preference number: 5 (lower is better) Translates to: FNCCLFAKPFLDLDH*PTFKGYKALHFSVV Trigger: GACAACCGAAAAGTGAAGAGCCTTATAACCTTTGAAGGTGGGTCAATGATCCAGGTCCAAAAATGGCTTGGCAAACAGACAACAATTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 |
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| CDS CAA 90 bp | CCCCAACTTGAAAGAGATCTCCGTGTTCCTGCATGCACTTCCTGCTaGGATGTCCATCCTTTCCCCATTGAAACTAATACTAACGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: PQLERDLRVPACTSC*DVHPFPIETNTNAW Trigger: CCAAGCGTTAGTATTAGTTTCAATGGGGAAAGGATGGACATCCAAGCAGGAAGTGCATGCAGGAACACGGAGATCTCTTTCAAGTTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS CAA 72 bp | GAAAGAGATCTCCGTGTTCCTGCATGCACTTCCTGCTaGGATGTCCATCCTTTCCCCATTGAAACTAATACT | + |
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Preference number: 6 (lower is better) Translates to: ERDLRVPACTSC*DVHPFPIETNT Trigger: AGTATTAGTTTCAATGGGGAAAGGATGGACATCCAAGCAGGAAGTGCATGCAGGAACACGGAGATCTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS GCA 72 bp | ATTGTTCATGGTGCACTCCTTCACTTTTCGGTTGTCTaGAGTGGTCTCTTCAAATTCTTCCCCCAACTTGAA | + |
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Preference number: 6 (lower is better) Translates to: IVHGALLHFSVV*SGLFKFFPQLE Trigger: TTCAAGTTGGGGGAAGAATTTGAAGAGACCACTGCAGACAACCGAAAAGTGAAGGAGTGCACCATGAACAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000193487.6 |
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| CDS CCA 72 bp | AAAGAGATCTCCGTGTTCCTGCATGCACTTCCTGCTTaGATGTCCATCCTTTCCCCATTGAAACTAATACTA | + |
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Preference number: 6 (lower is better) Translates to: KEISVFLHALPA*MSILSPLKLIL Trigger: TAGTATTAGTTTCAATGGGGAAAGGATGGACATCCAAGCAGGAAGTGCATGCAGGAACACGGAGATCTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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| CDS TCA 72 bp | TGTCTGTTTGCCAAGCCATTTTTGGACCTGGATCATTaGCCCACCTTCAAAGGTTATAAGGCTCTTCACTTT | + |
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Preference number: 6 (lower is better) Translates to: CLFAKPFLDLDH*PTFKGYKALHF Trigger: AAAGTGAAGAGCCTTATAACCTTTGAAGGTGGGTCAATGATCCAGGTCCAAAAATGGCTTGGCAAACAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 |
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| CDS GCA 72 bp | TTCAAAGGTTATAAGGCTCTTCACTTTTCGGTTGTCTaGAGTGGTCTCTTCAAATTCTTCCCCCAACTTGAA | + |
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Preference number: 6 (lower is better) Translates to: FKGYKALHFSVV*SGLFKFFPQLE Trigger: TTCAAGTTGGGGGAAGAATTTGAAGAGACCACTGCAGACAACCGAAAAGTGAAGAGCCTTATAACCTTTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 |
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| CDS CAA 72 bp | CATGCACTTCCTGCTTGGATGTCCATCCTTTCCCCATaGAAACTAATACTAACGCTTGGCTTTATTAAACAT | + |
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Preference number: 6 (lower is better) Translates to: HALPAWMSILSP*KLILTLGFIKH Trigger: ATGTTTAATAAAGCCAAGCGTTAGTATTAGTTTCAATGGGGAAAGGATGGACATCCAAGCAGGAAGTGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029038.8 ENSMUST00000191678.6 ENSMUST00000193487.6 |
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