Pregenerated sensors for FABP7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019874Ensembl transcript IDs: ENSMUST00000020024.12, ENSMUST00000165013.2
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATTTTCTACCTCCACACCGAAGACAAACTTATAATTAGTGACCAGTaGTTCATTAGCTGGCTAACTCTGGGACTCCAGGAAACCAAGTTG | + |
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Preference number: 1 (lower is better) Translates to: IFYLHTEDKLIISDQ*FISWLTLGLQETKL Trigger: CAACTTGGTTTCCTGGAGTCCCAGAGTTAGCCAGCTAATGAAGCACTGGTCACTAATTATAAGTTTGTCTTCGGTGTGGAGGTAGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020024.12 |
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| 3UTR GCA 72 bp | CTCCACACCGAAGACAAACTTATAATTAGTGACCAGTaGTTCATTAGCTGGCTAACTCTGGGACTCCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: LHTEDKLIISDQ*FISWLTLGLQE Trigger: TTCCTGGAGTCCCAGAGTTAGCCAGCTAATGAAGCACTGGTCACTAATTATAAGTTTGTCTTCGGTGTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020024.12 |
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| 3UTR TCA 72 bp | ATTTTCCTAATGAGTAGCTTACATTTAAGTTCCAGTTaGAGGCTGGACATTCACAGCAATCCCATGACCACG | + |
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Preference number: 3 (lower is better) Translates to: IFLMSSLHLSSS*RLDIHSNPMTT Trigger: CGTGGTCATGGGATTGCTGTGAATGTCCAGCCTTCAACTGGAACTTAAATGTAAGCTACTCATTAGGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165013.2 |
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| CDS-3UTR GCA 90 bp | TTCTACCTCCACACCGAAGACAAACTTATAATTAGTGACCAGTGCTTCATTAGCGTCACGTTTCCCACTTaGCTAGTGGCAAAGCCCACG | + |
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Preference number: 4 (lower is better) Translates to: FYLHTEDKLIISDQCFISVTFPT*LVAKPT Trigger: CGTGGGCTTTGCCACTAGGCAAGTGGGAAACGTGAC...GCTAATGAAGCACTGGTCACTAATTATAAGTTTGTCTTCGGTGTGGAGGTAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020024.12 |
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| CDS-3UTR TCA 90 bp | TTCTACCTCCACACCGAAGACAAACTTATAATTAGTGACCAGTGCTTCATTAGCTCCCACTTCTGCACATaGATGAGCTTGTCTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: FYLHTEDKLIISDQCFISSHFCT*MSLSPS Trigger: GGATGGAGACAAGCTCATTCATGTGCAGAAGTGGGA...GCTAATGAAGCACTGGTCACTAATTATAAGTTTGTCTTCGGTGTGGAGGTAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020024.12 |
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| CDS-3UTR GCA 90 bp | TTCTACCTCCACACCGAAGACAAACTTATAATTAGTGACCAGTGCTTCATTAGCTGTCAGCTTCCAGGTTaGGCAGAAAGCATCTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: FYLHTEDKLIISDQCFISCQLPG*AESIYH Trigger: ATGGTAGATGCTTTCTGCGCAACCTGGAAGCTGACA...GCTAATGAAGCACTGGTCACTAATTATAAGTTTGTCTTCGGTGTGGAGGTAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020024.12 |
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| CDS-3UTR CAA 90 bp | TTCTACCTCCACACCGAAGACAAACTTATAATTAGTGACCAGTGCTTCATTAGCGTTCTTGAATGTGCATaGTGTCCGGATCACCACTTT | + |
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Preference number: 5 (lower is better) Translates to: FYLHTEDKLIISDQCFISVLECA*CPDHHF Trigger: AAAGTGGTGATCCGGACACAATGCACATTCAAGAAC...GCTAATGAAGCACTGGTCACTAATTATAAGTTTGTCTTCGGTGTGGAGGTAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020024.12 |
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| CDS-3UTR CAA 90 bp | TTCTACCTCCACACCGAAGACAAACTTATAATTAGTGACCAGTGCTTCATTAGCAGAGTCACGACCATCTaGCCATCCTTAATTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FYLHTEDKLIISDQCFISRVTTI*PSLISL Trigger: CAGAGAAATTAAGGATGGCAAGATGGTCGTGACTCT...GCTAATGAAGCACTGGTCACTAATTATAAGTTTGTCTTCGGTGTGGAGGTAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020024.12 |
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| CDS-3UTR CAA 90 bp | TTCTACCTCCACACCGAAGACAAACTTATAATTAGTGACCAGTGCTTCATTAGCGTACAATTTGTTTCTTaGCCATCCCACTTCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: FYLHTEDKLIISDQCFISVQFVS*PSHFCT Trigger: TGTGCAGAAGTGGGATGGCAAAGAAACAAATTGTAC...GCTAATGAAGCACTGGTCACTAATTATAAGTTTGTCTTCGGTGTGGAGGTAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020024.12 |
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| CDS-3UTR CAA 90 bp | TTCTACCTCCACACCGAAGACAAACTTATAATTAGTGACCAGTGCTTCATTAGCTTTCTCTGGTACAATTaGTTTCTTTGCCATCCCACT | + |
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Preference number: 5 (lower is better) Translates to: FYLHTEDKLIISDQCFISFLWYN*FLCHPT Trigger: AGTGGGATGGCAAAGAAACAAATTGTACCAGAGAAA...GCTAATGAAGCACTGGTCACTAATTATAAGTTTGTCTTCGGTGTGGAGGTAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020024.12 |
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