Pregenerated sensors for FABP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062515Ensembl transcript IDs: ENSMUST00000029041.6
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CTGTGTCTAGGATTACCCAAGGTCTTGTATGCCACAGCGGACCTTAGTATGCAGTCTCTGACCGGATGGTaGCCAAATCCCCATTTACGC | + |
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Preference number: 4 (lower is better) Translates to: LCLGLPKVLYATADLSMQSLTGW*PNPHLR Trigger: GCGTAAATGGGGATTTGGTCACCATCCGGTCAGAGA...CTGCATACTAAGGTCCGCTGTGGCATACAAGACCTTGGGTAATCCTAGACACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029041.6 |
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| CDS-3UTR GCA 90 bp | CGACTGACTATTGTAGTGTTTGATGCAAATTTCCATCCAGGCCTCTTCCTTTGGTTTCCATCCCACTTCTaGACCTGCACCAGGGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: RLTIVVFDANFHPGLFLWFPSHF*TCTRAP Trigger: CGGGGCCCTGGTGCAGGTGCAGAAGTGGGATGGAAA...CCAAAGGAAGAGGCCTGGATGGAAATTTGCATCAAACACTACAATAGTCAGTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029041.6 |
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| CDS-3UTR TCA 90 bp | ATTTCACTGTGTCTAGGATTACCCAAGGTCTTGTATGCCACAGCGGACCTTAGTTCCTGTCGTCTGCGGTaGTTTCATCGAATTCCACGC | + |
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Preference number: 4 (lower is better) Translates to: ISLCLGLPKVLYATADLSSCRLR*FHRIPR Trigger: GCGTGGAATTCGATGAAATCACCGCAGACGACAGGA...ACTAAGGTCCGCTGTGGCATACAAGACCTTGGGTAATCCTAGACACAGTGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029041.6 |
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| CDS-3UTR GCA 90 bp | CGACTGACTATTGTAGTGTTTGATGCAAATTTCCATCCAGGCCTCTTCCTTTGGTGTTGGGCTTGGCCATaGCTGCCACTTTCCTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: RLTIVVFDANFHPGLFLWCWAWP*LPLSLW Trigger: CCACAAGGAAAGTGGCAGGCATGGCCAAGCCCAACA...CCAAAGGAAGAGGCCTGGATGGAAATTTGCATCAAACACTACAATAGTCAGTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029041.6 |
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| CDS-3UTR CCA 90 bp | ATGCCACAGCGGACCTTAGTATGCAGACTTGGTAAGTTCATGGACATTGGCTTTCTGCCACTTTCCTTGTaGCAAAGCCCACTCCCACTT | + |
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Preference number: 4 (lower is better) Translates to: MPQRTLVCRLGKFMDIGFLPLSL*QSPLPL Trigger: AAGTGGGAGTGGGCTTTGCCACAAGGAAAGTGGCAG...AAAGCCAATGTCCATGAACTTACCAAGTCTGCATACTAAGGTCCGCTGTGGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029041.6 |
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| CDS-3UTR GCA 90 bp | CATATGGAGATGAATAATTTCACTGTGTCTAGGATTACCCAAGGTCTTGTATGCGGGCTTGGCCATGCCTaGCACTTTCCTTGTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HMEMNNFTVSRITQGLVCGLGHA*HFPCGK Trigger: TTTGCCACAAGGAAAGTGGCAGGCATGGCCAAGCCC...GCATACAAGACCTTGGGTAATCCTAGACACAGTGAAATTATTCATCTCCATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029041.6 |
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| CDS-3UTR GCA 90 bp | CATATGGAGATGAATAATTTCACTGTGTCTAGGATTACCCAAGGTCTTGTATGCCACCTTCCTGTCGTCTaGGGTGATTTCATCGAATTC | + |
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Preference number: 4 (lower is better) Translates to: HMEMNNFTVSRITQGLVCHLPVV*GDFIEF Trigger: GAATTCGATGAAATCACCGCAGACGACAGGAAGGTG...GCATACAAGACCTTGGGTAATCCTAGACACAGTGAAATTATTCATCTCCATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029041.6 |
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| CDS-3UTR CCA 90 bp | CGACTGACTATTGTAGTGTTTGATGCAAATTTCCATCCAGGCCTCTTCCTTTGGGTTTTCTCTTTATTGTaGTCGACTTTCCATCCCACT | + |
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Preference number: 4 (lower is better) Translates to: RLTIVVFDANFHPGLFLWVFSLL*STFHPT Trigger: AGTGGGATGGAAAGTCGACCACAATAAAGAGAAAAC...CCAAAGGAAGAGGCCTGGATGGAAATTTGCATCAAACACTACAATAGTCAGTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029041.6 |
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| CDS-3UTR CAA 90 bp | CGACTGACTATTGTAGTGTTTGATGCAAATTTCCATCCAGGCCTCTTCCTTTGGACGCTGATGATCATGTaGGGCTTGGCCATGCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: RLTIVVFDANFHPGLFLWTLMIM*GLAMPA Trigger: GGCAGGCATGGCCAAGCCCAACATGATCATCAGCGT...CCAAAGGAAGAGGCCTGGATGGAAATTTGCATCAAACACTACAATAGTCAGTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029041.6 |
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| CDS-3UTR CAA 90 bp | CGACTGACTATTGTAGTGTTTGATGCAAATTTCCATCCAGGCCTCTTCCTTTGGATGATCATGTTGGGCTaGGCCATGCCTGCCACTTTC | + |
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Preference number: 5 (lower is better) Translates to: RLTIVVFDANFHPGLFLWMIMLG*AMPATF Trigger: GAAAGTGGCAGGCATGGCCAAGCCCAACATGATCAT...CCAAAGGAAGAGGCCTGGATGGAAATTTGCATCAAACACTACAATAGTCAGTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029041.6 |
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| CDS-3UTR CAA 90 bp | ATGCCACAGCGGACCTTAGTATGCAGACTTGGTAAGTTCATGGACATTGGCTTTCATTCCACCACCAGCTaGTCACCATCTCGTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: MPQRTLVCRLGKFMDIGFHSTTS*SPSRFL Trigger: GAGAAAACGAGATGGTGACAAGCTGGTGGTGGAATG...AAAGCCAATGTCCATGAACTTACCAAGTCTGCATACTAAGGTCCGCTGTGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029041.6 |
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| CDS-3UTR CAA 90 bp | ATTTCACTGTGTCTAGGATTACCCAAGGTCTTGTATGCCACAGCGGACCTTAGTCTCGTTTTCTCTTTATaGTGGTCGACTTTCCATCCC | + |
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Preference number: 5 (lower is better) Translates to: ISLCLGLPKVLYATADLSLVFSL*WSTFHP Trigger: GGGATGGAAAGTCGACCACAATAAAGAGAAAACGAG...ACTAAGGTCCGCTGTGGCATACAAGACCTTGGGTAATCCTAGACACAGTGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029041.6 |
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| CDS-3UTR CAA 90 bp | ATGCCACAGCGGACCTTAGTATGCAGACTTGGTAAGTTCATGGACATTGGCTTTCCCTTTCATAAACTCTaGTGGAAGTCACGCCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: MPQRTLVCRLGKFMDIGFPFHKL*WKSRLS Trigger: TGAAAGGCGTGACTTCCACAAGAGTTTATGAAAGGG...AAAGCCAATGTCCATGAACTTACCAAGTCTGCATACTAAGGTCCGCTGTGGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029041.6 |
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| CDS-3UTR CAA 90 bp | ATGAATAATTTCACTGTGTCTAGGATTACCCAAGGTCTTGTATGCCACAGCGGAAATTCCACGCCCAGTTaGAAGGAAATCTCGGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: MNNFTVSRITQGLVCHSGNSTPS*KEISVF Trigger: AAACACCGAGATTTCCTTCAAACTGGGCGTGGAATT...TCCGCTGTGGCATACAAGACCTTGGGTAATCCTAGACACAGTGAAATTATTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029041.6 |
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| CDS CAA 90 bp | CGGATGGTGACCAAATCCCCATTTACGCTGATGATCATGTTGGGCTaGGCCATGCCTGCCACTTTCCTTGTGGCAAAGCCCACTCCCACT | + |
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Preference number: 6 (lower is better) Translates to: RMVTKSPFTLMIMLG*AMPATFLVAKPTPT Trigger: AGTGGGAGTGGGCTTTGCCACAAGGAAAGTGGCAGGCATGGCCAAGCCCAACATGATCATCAGCGTAAATGGGGATTTGGTCACCATCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029041.6 |
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| CDS GCA 72 bp | TTTATTGTGGTCGACTTTCCATCCCACTTCTGCACCTaGACCAGGGCCCCGCCATCTAGGGTTATGATGCTC | + |
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Preference number: 6 (lower is better) Translates to: FIVVDFPSHFCT*TRAPPSRVMML Trigger: GAGCATCATAACCCTAGATGGCGGGGCCCTGGTGCAGGTGCAGAAGTGGGATGGAAAGTCGACCACAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029041.6 |
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| CDS CAA 90 bp | TCTGACCGGATGGTGACCAAATCCCCATTTACGCTGATGATCATGTaGGGCTTGGCCATGCCTGCCACTTTCCTTGTGGCAAAGCCCACT | + |
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Preference number: 6 (lower is better) Translates to: SDRMVTKSPFTLMIM*GLAMPATFLVAKPT Trigger: AGTGGGCTTTGCCACAAGGAAAGTGGCAGGCATGGCCAAGCCCAACATGATCATCAGCGTAAATGGGGATTTGGTCACCATCCGGTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029041.6 |
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| CDS CAA 72 bp | ACCAAATCCCCATTTACGCTGATGATCATGTTGGGCTaGGCCATGCCTGCCACTTTCCTTGTGGCAAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: TKSPFTLMIMLG*AMPATFLVAKP Trigger: GGGCTTTGCCACAAGGAAAGTGGCAGGCATGGCCAAGCCCAACATGATCATCAGCGTAAATGGGGATTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029041.6 |
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| CDS CAA 72 bp | ATGGTGACCAAATCCCCATTTACGCTGATGATCATGTaGGGCTTGGCCATGCCTGCCACTTTCCTTGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: MVTKSPFTLMIM*GLAMPATFLVA Trigger: TGCCACAAGGAAAGTGGCAGGCATGGCCAAGCCCAACATGATCATCAGCGTAAATGGGGATTTGGTCACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029041.6 |
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