Pregenerated sensors for FABP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023057Ensembl transcript IDs: ENSMUST00000023820.6
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | AGTGCTGATAGGATGACGAATGAGCCTGGCATTAGCATGATGGAGAAAGAAATCCTTAGCTCTTCAGCGTaGCTCCAGGCTCTGAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: SADRMTNEPGISMMEKEILSSSA*LQALRS Trigger: ACTTCTCAGAGCCTGGAGCAACGCTGAAGAGCTAAG...GATTTCTTTCTCCATCATGCTAATGCCAGGCTCATTCGTCATCCTATCAGCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023820.6 |
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| 3UTR TCA 72 bp | AATGAGCCTGGCATTAGCATGATGGAGAAAGAAATCTaGCATCAGCTTAGCTCTTCAGCGTTGCTCCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: NEPGISMMEKEI*HQLSSSALLQA Trigger: AGCCTGGAGCAACGCTGAAGAGCTAAGCTGATGTCAGATTTCTTTCTCCATCATGCTAATGCCAGGCTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023820.6 |
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| CDS-3UTR TCA 90 bp | ACCAGTGCTGATAGGATGACGAATGAGCCTGGCATTAGCATGATGGAGAAAGAAAGTTTCAGATTGTCATaGGCTCCAAGCTTCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: TSADRMTNEPGISMMEKESFRLS*APSFLF Trigger: GAAGAGGAAGCTTGGAGCTCATGACAATCTGAAACT...TTCTTTCTCCATCATGCTAATGCCAGGCTCATTCGTCATCCTATCAGCACTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023820.6 |
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| CDS-3UTR TCA 90 bp | AGTGCTGATAGGATGACGAATGAGCCTGGCATTAGCATGATGGAGAAAGAAATCTGCCCATTTTCTCCATaGACTTTTCATAGTTCTCGT | + |
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Preference number: 4 (lower is better) Translates to: SADRMTNEPGISMMEKEICPFSP*TFHSSR Trigger: ACGAGAACTATGAAAAGTTCATGGAGAAAATGGGCA...GATTTCTTTCTCCATCATGCTAATGCCAGGCTCATTCGTCATCCTATCAGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023820.6 |
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| CDS-3UTR TCA 90 bp | ACCAGTGCTGATAGGATGACGAATGAGCCTGGCATTAGCATGATGGAGAAAGAATATTTCCATCCTGTGTaGTTGTCAGTTTCAGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSADRMTNEPGISMMEKEYFHPV*LSVSDC Trigger: ACAATCTGAAACTGACAATCACACAGGATGGAAATA...TTCTTTCTCCATCATGCTAATGCCAGGCTCATTCGTCATCCTATCAGCACTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023820.6 |
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| CDS-3UTR CAA 90 bp | AGTGCTGATAGGATGACGAATGAGCCTGGCATTAGCATGATGGAGAAAGAAATCATCAGCTCCTTTCCATaGTCTACACGTGTGAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SADRMTNEPGISMMEKEIISSFP*STRVNF Trigger: GAAATTCACACGTGTAGACAATGGAAAGGAGCTGAT...GATTTCTTTCTCCATCATGCTAATGCCAGGCTCATTCGTCATCCTATCAGCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023820.6 |
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| CDS-3UTR CAA 90 bp | AGTGCTGATAGGATGACGAATGAGCCTGGCATTAGCATGATGGAGAAAGAAATCTCAATGTTTCTGAAGTaGCTTGATTCTTTGACTGTG | + |
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Preference number: 5 (lower is better) Translates to: SADRMTNEPGISMMEKEISMFLK*LDSLTV Trigger: CACAGTCAAAGAATCAAGCAACTTCAGAAACATTGA...GATTTCTTTCTCCATCATGCTAATGCCAGGCTCATTCGTCATCCTATCAGCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023820.6 |
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| CDS TCA 90 bp | GTTTACACCGAGCTCAAACACAACATCAATGTTTCTGAAGTTGCTTaGTTCTTTGACTGTGAATTTATTTCCATCCTGTGTGATTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: VYTELKHNINVSEVA*FFDCEFISILCDCQ Trigger: CTGACAATCACACAGGATGGAAATAAATTCACAGTCAAAGAATCAAGCAACTTCAGAAACATTGATGTTGTGTTTGAGCTCGGTGTAAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023820.6 |
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| CDS TCA 72 bp | TTTCCATCCTGTGTGATTGTCAGTTTCAGATTGTCATaGGCTCCAAGCTTCCTCTTCATCACATTAATGCCC | + |
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Preference number: 6 (lower is better) Translates to: FPSCVIVSFRLS*APSFLFITLMP Trigger: GGGCATTAATGTGATGAAGAGGAAGCTTGGAGCTCATGACAATCTGAAACTGACAATCACACAGGATGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023820.6 |
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| CDS CAA 72 bp | CCAGAAACCTCTCGGACAGCAATCAGCTCCTTTCCATaGTCTACACGTGTGAATTTCCCAATAAGTTTATTT | + |
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Preference number: 6 (lower is better) Translates to: PETSRTAISSFP*STRVNFPISLF Trigger: AAATAAACTTATTGGGAAATTCACACGTGTAGACAATGGAAAGGAGCTGATTGCTGTCCGAGAGGTTTCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023820.6 |
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| CDS CAA 90 bp | AGTTCATTACCAGAAACCTCTCGGACAGCAATCAGCTCCTTTCCATaGTCTACACGTGTGAATTTCCCAATAAGTTTATTTCCCTCAATG | + |
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Preference number: 6 (lower is better) Translates to: SSLPETSRTAISSFP*STRVNFPISLFPSM Trigger: CATTGAGGGAAATAAACTTATTGGGAAATTCACACGTGTAGACAATGGAAAGGAGCTGATTGCTGTCCGAGAGGTTTCTGGTAATGAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023820.6 |
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| CDS CAA 90 bp | CCGAGCTCAAACACAACATCAATGTTTCTGAAGTTGCTTGATTCTTaGACTGTGAATTTATTTCCATCCTGTGTGATTGTCAGTTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: PSSNTTSMFLKLLDS*TVNLFPSCVIVSFR Trigger: TCTGAAACTGACAATCACACAGGATGGAAATAAATTCACAGTCAAAGAATCAAGCAACTTCAGAAACATTGATGTTGTGTTTGAGCTCGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023820.6 |
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| CDS CAA 72 bp | AACACAACATCAATGTTTCTGAAGTTGCTTGATTCTTaGACTGTGAATTTATTTCCATCCTGTGTGATTGTC | + |
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Preference number: 6 (lower is better) Translates to: NTTSMFLKLLDS*TVNLFPSCVIV Trigger: GACAATCACACAGGATGGAAATAAATTCACAGTCAAAGAATCAAGCAACTTCAGAAACATTGATGTTGTGTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023820.6 |
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