Pregenerated sensors for FABP12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027530Ensembl transcript IDs: ENSMUST00000029043.13, ENSMUST00000117917.8, ENSMUST00000172126.8
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATTGTATCAAGGCTGTGGTGTGGGAAGATGACTTCATTGAGTGTTaGAAAGAGAAGGCAGAATTGTACCTTTGCTTCTCTTCCCAGATA | + |
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Preference number: 1 (lower is better) Translates to: HCIKAVVWEDDFIEC*KEKAELYLCFSSQI Trigger: TATCTGGGAAGAGAAGCAAAGGTACAATTCTGCCTTCTCTTTTCAACACTCAATGAAGTCATCTTCCCACACCACAGCCTTGATACAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029043.13 |
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| 3UTR-3UTR TCA 90 bp | GCATCTCGAATCACTACTGAAGAACATGAATGTTCAGGTTGCAAGCTTAGTTTGAGTTCGTCTACAAAGTaGGGTGTCAGATCCACAAGG | + |
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Preference number: 2 (lower is better) Translates to: ASRITTEEHECSGCKLSLSSSTK*GVRSTR Trigger: CCTTGTGGATCTGACACCTCACTTTGTAGACGAACT...CAAACTAAGCTTGCAACCTGAACATTCATGTTCTTCAGTAGTGATTCGAGATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029043.13 |
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| 3UTR CAA 90 bp | GTCCTACACATTGTATCAAGGCTGTGGTGTGGGAAGATGACTTCATaGAGTGTTGAAAAGAGAAGGCAGAATTGTACCTTTGCTTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: VLHIVSRLWCGKMTS*SVEKRRQNCTFASL Trigger: AAGAGAAGCAAAGGTACAATTCTGCCTTCTCTTTTCAACACTCAATGAAGTCATCTTCCCACACCACAGCCTTGATACAATGTGTAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029043.13 |
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| 3UTR-3UTR CCA 90 bp | TATTACCAGCCCAATTATTCAAGTAGGACATTACTTTCTCAAGGATCCACTAGAATCAAGGCTGTGGTGTaGGAAGATGACTTCATTGAG | + |
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Preference number: 2 (lower is better) Translates to: YYQPNYSSRTLLSQGSTRIKAVV*EDDFIE Trigger: CTCAATGAAGTCATCTTCCCACACCACAGCCTTGAT...TCTAGTGGATCCTTGAGAAAGTAATGTCCTACTTGAATAATTGGGCTGGTAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029043.13 |
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| 3UTR TCA 72 bp | ATCCACAAGGTGACGAACATAACCCCAGGCCTAATGTaGGGTCCGCTGTGGATAGAGCAGCAAGCACTCCAT | + |
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Preference number: 3 (lower is better) Translates to: IHKVTNITPGLM*GPLWIEQQALH Trigger: ATGGAGTGCTTGCTGCTCTATCCACAGCGGACCTCACATTAGGCCTGGGGTTATGTTCGTCACCTTGTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029043.13 |
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| 3UTR GCA 72 bp | AATTCGCATGTGATTATGGTGGATCAGTCTCCAGGCTaGAGAGCTGATAGGAAGGGTGGGACTAGAATCCAT | + |
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Preference number: 3 (lower is better) Translates to: NSHVIMVDQSPG*RADRKGGTRIH Trigger: ATGGATTCTAGTCCCACCCTTCCTATCAGCTCTGCAGCCTGGAGACTGATCCACCATAATCACATGCGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029043.13 |
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| 3UTR CCA 72 bp | GACATAAGCGAGGTCCTACACATTGTATCAAGGCTGTaGTGTGGGAAGATGACTTCATTGAGTGTTGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: DISEVLHIVSRL*CGKMTSLSVEK Trigger: CTTTTCAACACTCAATGAAGTCATCTTCCCACACCACAGCCTTGATACAATGTGTAGGACCTCGCTTATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029043.13 |
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| 3UTR TCA 72 bp | AAGGCTGTGGTGTGGGAAGATGACTTCATTGAGTGTTaGAAAGAGAAGGCAGAATTGTACCTTTGCTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: KAVVWEDDFIEC*KEKAELYLCFS Trigger: AGAGAAGCAAAGGTACAATTCTGCCTTCTCTTTTCAACACTCAATGAAGTCATCTTCCCACACCACAGCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029043.13 |
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| 3UTR CCA 72 bp | CATGGTGATATTGTGCAAGCATTCATAGATCTTACTTaGGAGTTTTATTCGAACAACATCATTAGTTTGGAT | + |
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Preference number: 3 (lower is better) Translates to: HGDIVQAFIDLT*EFYSNNIISLD Trigger: ATCCAAACTAATGATGTTGTTCGAATAAAACTCCCAAGTAAGATCTATGAATGCTTGCACAATATCACCATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029043.13 |
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| CDS-3UTR TCA 90 bp | AATGTGAGGTCCGCTGTGGATAGAGCAGCAAGCACTCCATCATGGCTGATTTCCTCCCAGTCCTGGACTTaGACCAAGGAGTCATTATCT | + |
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Preference number: 4 (lower is better) Translates to: NVRSAVDRAASTPSWLISSQSWT*TKESLS Trigger: AGATAATGACTCCTTGGTTCAAGTCCAGGACTGGGA...GGAAATCAGCCATGATGGAGTGCTTGCTGCTCTATCCACAGCGGACCTCACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029043.13 |
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| CDS-3UTR GCA 90 bp | AATGTGAGGTCCGCTGTGGATAGAGCAGCAAGCACTCCATCATGGCTGATTTCCCTGTACTCTTGCTTTTaGGGCCACTTGGTGTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: NVRSAVDRAASTPSWLISLYSCF*GHLVWF Trigger: AAACCACACCAAGTGGCCGCAAAAGCAAGAGTACAG...GGAAATCAGCCATGATGGAGTGCTTGCTGCTCTATCCACAGCGGACCTCACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029043.13 |
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| 3UTR CAA 72 bp | TCTCTCTTTGCTCCTTTGCCCCTGAGTGTAATAGCTTaGCTTAGTGCACACGCCCTTCCTCAATGTCCTACC | + |
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Preference number: 4 (lower is better) Translates to: SLFAPLPLSVIA*LSAHALPQCPT Trigger: GGTAGGACATTGAGGAAGGGCGTGTGCACTAAGCAAAGCTATTACACTCAGGGGCAAAGGAGCAAAGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029043.13 |
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| CDS-3UTR TCA 90 bp | TGGGCCTGCACTTGCAAAGTTCTATGTAACAGAGTTGAACATTTAATTGGAGTGGATCTCCGTCTGTGCTaGTGGTCACAGTGGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: WACTCKVLCNRVEHLIGVDLRLC*WSQWAL Trigger: CAAAGCCCACTGTGACCATCAGCACAGACGGAGATC...CACTCCAATTAAATGTTCAACTCTGTTACATAGAACTTTGCAAGTGCAGGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029043.13 |
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| CDS-3UTR GCA 90 bp | TGGGAGTTTTATTCGAACAACATCATTAGTTTGGATGACAATTTGAGAGCATGGGGTCACAGTGGGCTTTaGCAGACAGCCCAGTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: WEFYSNNIISLDDNLRAWGHSGL*QTAQFP Trigger: AGGAAACTGGGCTGTCTGGCAAAGCCCACTGTGACC...CCATGCTCTCAAATTGTCATCCAAACTAATGATGTTGTTCGAATAAAACTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029043.13 ENSMUST00000117917.8 ENSMUST00000172126.8 |
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| CDS-3UTR CCA 90 bp | TGGGAGTTTTATTCGAACAACATCATTAGTTTGGATGACAATTTGAGAGCATGGGTCTCCTGCAGATGGTaGCTTCCTTGCCATCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: WEFYSNNIISLDDNLRAWVSCRW*LPCHPS Trigger: ACTGGGATGGCAAGGAAGCCACCATCTGCAGGAGAC...CCATGCTCTCAAATTGTCATCCAAACTAATGATGTTGTTCGAATAAAACTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029043.13 ENSMUST00000117917.8 ENSMUST00000172126.8 |
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| CDS-3UTR TCA 90 bp | GAGTTTTATTCGAACAACATCATTAGTTTGGATGACAATTTGAGAGCATGGAGAGATCTCCGTCTGTGCTaGTGGTCACAGTGGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: EFYSNNIISLDDNLRAWRDLRLC*WSQWAL Trigger: CAAAGCCCACTGTGACCATCAGCACAGACGGAGATC...TCTCCATGCTCTCAAATTGTCATCCAAACTAATGATGTTGTTCGAATAAAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029043.13 ENSMUST00000117917.8 ENSMUST00000172126.8 |
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| CDS-3UTR TCA 90 bp | ACTTGGGAGTTTTATTCGAACAACATCATTAGTTTGGATGACAATTTGAGAGCAGATCTCCGTCTGTGCTaGTGGTCACAGTGGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: TWEFYSNNIISLDDNLRADLRLC*WSQWAL Trigger: CAAAGCCCACTGTGACCATCAGCACAGACGGAGATC...TGCTCTCAAATTGTCATCCAAACTAATGATGTTGTTCGAATAAAACTCCCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029043.13 ENSMUST00000117917.8 ENSMUST00000172126.8 |
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| CDS-3UTR GCA 90 bp | ACTTGGGAGTTTTATTCGAACAACATCATTAGTTTGGATGACAATTTGAGAGCAGGTCACAGTGGGCTTTaGCAGACAGCCCAGTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: TWEFYSNNIISLDDNLRAGHSGL*QTAQFP Trigger: AGGAAACTGGGCTGTCTGGCAAAGCCCACTGTGACC...TGCTCTCAAATTGTCATCCAAACTAATGATGTTGTTCGAATAAAACTCCCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029043.13 ENSMUST00000117917.8 ENSMUST00000172126.8 |
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| CDS-3UTR GCA 90 bp | TTTTATTCGAACAACATCATTAGTTTGGATGACAATTTGAGAGCATGGAGACCTGGTCACAGTGGGCTTTaGCAGACAGCCCAGTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: FYSNNIISLDDNLRAWRPGHSGL*QTAQFP Trigger: AGGAAACTGGGCTGTCTGGCAAAGCCCACTGTGACC...AGGTCTCCATGCTCTCAAATTGTCATCCAAACTAATGATGTTGTTCGAATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029043.13 ENSMUST00000117917.8 ENSMUST00000172126.8 |
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| CDS-3UTR CCA 90 bp | TGGGAGTTTTATTCGAACAACATCATTAGTTTGGATGACAATTTGAGAGCATGGTGCGGCCACTTGGTGTaGTTTCCTCAAACTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: WEFYSNNIISLDDNLRAWCGHLV*FPQTPL Trigger: GAGAGGAGTTTGAGGAAACCACACCAAGTGGCCGCA...CCATGCTCTCAAATTGTCATCCAAACTAATGATGTTGTTCGAATAAAACTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029043.13 ENSMUST00000117917.8 ENSMUST00000172126.8 |
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| CDS-3UTR CCA 90 bp | TTTTATTCGAACAACATCATTAGTTTGGATGACAATTTGAGAGCATGGAGACCTGTCTCCTGCAGATGGTaGCTTCCTTGCCATCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: FYSNNIISLDDNLRAWRPVSCRW*LPCHPS Trigger: ACTGGGATGGCAAGGAAGCCACCATCTGCAGGAGAC...AGGTCTCCATGCTCTCAAATTGTCATCCAAACTAATGATGTTGTTCGAATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029043.13 ENSMUST00000117917.8 ENSMUST00000172126.8 |
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| CDS-3UTR GCA 90 bp | GAGTTTTATTCGAACAACATCATTAGTTTGGATGACAATTTGAGAGCATGGAGAAGATGGTGGCTTCCTTaGCATCCCAGTCCTGGACTT | + |
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Preference number: 4 (lower is better) Translates to: EFYSNNIISLDDNLRAWRRWWLP*HPSPGL Trigger: AAGTCCAGGACTGGGATGGCAAGGAAGCCACCATCT...TCTCCATGCTCTCAAATTGTCATCCAAACTAATGATGTTGTTCGAATAAAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029043.13 ENSMUST00000117917.8 ENSMUST00000172126.8 |
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| CDS-3UTR GCA 90 bp | TTTTATTCGAACAACATCATTAGTTTGGATGACAATTTGAGAGCATGGAGACCTAGATGGTGGCTTCCTTaGCATCCCAGTCCTGGACTT | + |
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Preference number: 4 (lower is better) Translates to: FYSNNIISLDDNLRAWRPRWWLP*HPSPGL Trigger: AAGTCCAGGACTGGGATGGCAAGGAAGCCACCATCT...AGGTCTCCATGCTCTCAAATTGTCATCCAAACTAATGATGTTGTTCGAATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029043.13 ENSMUST00000117917.8 ENSMUST00000172126.8 |
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| CDS-3UTR GCA 90 bp | ACTTGGGAGTTTTATTCGAACAACATCATTAGTTTGGATGACAATTTGAGAGCAAGATGGTGGCTTCCTTaGCATCCCAGTCCTGGACTT | + |
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Preference number: 4 (lower is better) Translates to: TWEFYSNNIISLDDNLRARWWLP*HPSPGL Trigger: AAGTCCAGGACTGGGATGGCAAGGAAGCCACCATCT...TGCTCTCAAATTGTCATCCAAACTAATGATGTTGTTCGAATAAAACTCCCAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029043.13 ENSMUST00000117917.8 ENSMUST00000172126.8 |
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| CDS-3UTR CCA 90 bp | TTTTATTCGAACAACATCATTAGTTTGGATGACAATTTGAGAGCATGGAGACCTTGCGGCCACTTGGTGTaGTTTCCTCAAACTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: FYSNNIISLDDNLRAWRPCGHLV*FPQTPL Trigger: GAGAGGAGTTTGAGGAAACCACACCAAGTGGCCGCA...AGGTCTCCATGCTCTCAAATTGTCATCCAAACTAATGATGTTGTTCGAATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029043.13 ENSMUST00000117917.8 ENSMUST00000172126.8 |
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| CDS-3UTR TCA 90 bp | TATTACCAGCCCAATTATTCAAGTAGGACATTACTTTCTCAAGGATCCACTAGAACTCCTCTCCCAGCTTaGAGGAAATCTCCTTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: YYQPNYSSRTLLSQGSTRTPLPA*RKSPCF Trigger: AAAACAAGGAGATTTCCTTCAAGCTGGGAGAGGAGT...TCTAGTGGATCCTTGAGAAAGTAATGTCCTACTTGAATAATTGGGCTGGTAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029043.13 |
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| CDS-3UTR TCA 90 bp | TTTTATTCGAACAACATCATTAGTTTGGATGACAATTTGAGAGCATGGAGACCTTCCCAGTCCTGGACTTaGACCAAGGAGTCATTATCT | + |
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Preference number: 4 (lower is better) Translates to: FYSNNIISLDDNLRAWRPSQSWT*TKESLS Trigger: AGATAATGACTCCTTGGTTCAAGTCCAGGACTGGGA...AGGTCTCCATGCTCTCAAATTGTCATCCAAACTAATGATGTTGTTCGAATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029043.13 ENSMUST00000117917.8 ENSMUST00000172126.8 |
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| CDS-3UTR TCA 90 bp | ACTTGGGAGTTTTATTCGAACAACATCATTAGTTTGGATGACAATTTGAGAGCATCCCAGTCCTGGACTTaGACCAAGGAGTCATTATCT | + |
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Preference number: 4 (lower is better) Translates to: TWEFYSNNIISLDDNLRASQSWT*TKESLS Trigger: AGATAATGACTCCTTGGTTCAAGTCCAGGACTGGGA...TGCTCTCAAATTGTCATCCAAACTAATGATGTTGTTCGAATAAAACTCCCAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029043.13 ENSMUST00000117917.8 ENSMUST00000172126.8 |
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| CDS-3UTR GCA 90 bp | TTTTATTCGAACAACATCATTAGTTTGGATGACAATTTGAGAGCATGGAGACCTCTGTACTCTTGCTTTTaGGGCCACTTGGTGTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: FYSNNIISLDDNLRAWRPLYSCF*GHLVWF Trigger: AAACCACACCAAGTGGCCGCAAAAGCAAGAGTACAG...AGGTCTCCATGCTCTCAAATTGTCATCCAAACTAATGATGTTGTTCGAATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029043.13 ENSMUST00000117917.8 ENSMUST00000172126.8 |
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| CDS-3UTR TCA 90 bp | GAGTTTTATTCGAACAACATCATTAGTTTGGATGACAATTTGAGAGCATGGAGAACTCCTCTCCCAGCTTaGAGGAAATCTCCTTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: EFYSNNIISLDDNLRAWRTPLPA*RKSPCF Trigger: AAAACAAGGAGATTTCCTTCAAGCTGGGAGAGGAGT...TCTCCATGCTCTCAAATTGTCATCCAAACTAATGATGTTGTTCGAATAAAACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029043.13 ENSMUST00000117917.8 ENSMUST00000172126.8 |
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| 3UTR CAA 72 bp | GCCAGACTAATTGATAAGTACAGTCTATCATCTGTCTaGACATTTATTGTTCATTTCAGGCTATTACCAGCC | + |
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Preference number: 4 (lower is better) Translates to: ARLIDKYSLSSV*TFIVHFRLLPA Trigger: GGCTGGTAATAGCCTGAAATGAACAATAAATGTCAAGACAGATGATAGACTGTACTTATCAATTAGTCTGGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029043.13 |
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| CDS-3UTR CAA 90 bp | AATGTGAGGTCCGCTGTGGATAGAGCAGCAAGCACTCCATCATGGCTGATTTCCTGGTCACAGTGGGCTTaGCCAGACAGCCCAGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: NVRSAVDRAASTPSWLISWSQWA*PDSPVS Trigger: GGAAACTGGGCTGTCTGGCAAAGCCCACTGTGACCA...GGAAATCAGCCATGATGGAGTGCTTGCTGCTCTATCCACAGCGGACCTCACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029043.13 |
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| CDS-3UTR CAA 90 bp | GCATCTCGAATCACTACTGAAGAACATGAATGTTCAGGTTGCAAGCTTAGTTTGCAGATGGTGGCTTCCTaGCCATCCCAGTCCTGGACT | + |
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Preference number: 5 (lower is better) Translates to: ASRITTEEHECSGCKLSLQMVAS*PSQSWT Trigger: AGTCCAGGACTGGGATGGCAAGGAAGCCACCATCTG...CAAACTAAGCTTGCAACCTGAACATTCATGTTCTTCAGTAGTGATTCGAGATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029043.13 |
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| CDS-3UTR CAA 90 bp | TGGGAGTTTTATTCGAACAACATCATTAGTTTGGATGACAATTTGAGAGCATGGCAGATGGTGGCTTCCTaGCCATCCCAGTCCTGGACT | + |
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Preference number: 5 (lower is better) Translates to: WEFYSNNIISLDDNLRAWQMVAS*PSQSWT Trigger: AGTCCAGGACTGGGATGGCAAGGAAGCCACCATCTG...CCATGCTCTCAAATTGTCATCCAAACTAATGATGTTGTTCGAATAAAACTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029043.13 ENSMUST00000117917.8 ENSMUST00000172126.8 |
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| CDS-3UTR CAA 90 bp | TTTTATTCGAACAACATCATTAGTTTGGATGACAATTTGAGAGCATGGAGACCTTGGTCACAGTGGGCTTaGCCAGACAGCCCAGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: FYSNNIISLDDNLRAWRPWSQWA*PDSPVS Trigger: GGAAACTGGGCTGTCTGGCAAAGCCCACTGTGACCA...AGGTCTCCATGCTCTCAAATTGTCATCCAAACTAATGATGTTGTTCGAATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029043.13 ENSMUST00000117917.8 ENSMUST00000172126.8 |
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| CDS-3UTR CAA 90 bp | GAGTTTTATTCGAACAACATCATTAGTTTGGATGACAATTTGAGAGCATGGAGATGGTCACAGTGGGCTTaGCCAGACAGCCCAGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: EFYSNNIISLDDNLRAWRWSQWA*PDSPVS Trigger: GGAAACTGGGCTGTCTGGCAAAGCCCACTGTGACCA...TCTCCATGCTCTCAAATTGTCATCCAAACTAATGATGTTGTTCGAATAAAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029043.13 ENSMUST00000117917.8 ENSMUST00000172126.8 |
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| CDS-3UTR CAA 90 bp | TGGGCCTGCACTTGCAAAGTTCTATGTAACAGAGTTGAACATTTAATTGGAGTGACTGTACTCTTGCTTTaGCGGCCACTTGGTGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: WACTCKVLCNRVEHLIGVTVLLL*RPLGVV Trigger: AACCACACCAAGTGGCCGCAAAAGCAAGAGTACAGT...CACTCCAATTAAATGTTCAACTCTGTTACATAGAACTTTGCAAGTGCAGGCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029043.13 |
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| CDS-3UTR CAA 90 bp | TTTTATTCGAACAACATCATTAGTTTGGATGACAATTTGAGAGCATGGAGACCTCAGATGGTGGCTTCCTaGCCATCCCAGTCCTGGACT | + |
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Preference number: 5 (lower is better) Translates to: FYSNNIISLDDNLRAWRPQMVAS*PSQSWT Trigger: AGTCCAGGACTGGGATGGCAAGGAAGCCACCATCTG...AGGTCTCCATGCTCTCAAATTGTCATCCAAACTAATGATGTTGTTCGAATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029043.13 ENSMUST00000117917.8 ENSMUST00000172126.8 |
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| CDS-3UTR CAA 90 bp | ACTTGGGAGTTTTATTCGAACAACATCATTAGTTTGGATGACAATTTGAGAGCAACTGTACTCTTGCTTTaGCGGCCACTTGGTGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: TWEFYSNNIISLDDNLRATVLLL*RPLGVV Trigger: AACCACACCAAGTGGCCGCAAAAGCAAGAGTACAGT...TGCTCTCAAATTGTCATCCAAACTAATGATGTTGTTCGAATAAAACTCCCAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029043.13 ENSMUST00000117917.8 ENSMUST00000172126.8 |
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