Pregenerated sensors for FABP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054422Ensembl transcript IDs: ENSMUST00000067492.8
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | CCTTCATGCACGATTTCTGACACCCCCTTGATGTCCTTCCCTTTCTaGATGAGGTCCTCGGGCAGACCTATTGCCTTCATGAATGGCTCA | + |
Preference number: 5 (lower is better) Translates to: PSCTISDTPLMSFPF*MRSSGRPIAFMNGS Trigger: TGAGCCATTCATGAAGGCAATAGGTCTGCCCGAGGACCTCATCCAGAAAGGGAAGGACATCAAGGGGGTGTCAGAAATCGTGCATGAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067492.8 |
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CDS CCA 72 bp | ACGATTTCTGACACCCCCTTGATGTCCTTCCCTTTCTaGATGAGGTCCTCGGGCAGACCTATTGCCTTCATG | + |
Preference number: 6 (lower is better) Translates to: TISDTPLMSFPF*MRSSGRPIAFM Trigger: CATGAAGGCAATAGGTCTGCCCGAGGACCTCATCCAGAAAGGGAAGGACATCAAGGGGGTGTCAGAAATCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067492.8 |
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CDS CCA 72 bp | GATGAGGTCCTCGGGCAGACCTATTGCCTTCATGAATaGCTCAAAGTTCTCCTGGCTCTGCAATTGGTACTT | + |
Preference number: 6 (lower is better) Translates to: DEVLGQTYCLHE*LKVLLALQLVL Trigger: AAGTACCAATTGCAGAGCCAGGAGAACTTTGAGCCATTCATGAAGGCAATAGGTCTGCCCGAGGACCTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067492.8 |
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CDS CAA 72 bp | GTGTCTCCATTGAGTTCAGTCACGGACTTTATGCCTTaGAAAGTTGTCACCATTTTATTGTCACCTTCCAGC | + |
Preference number: 6 (lower is better) Translates to: VSPLSSVTDFMP*KVVTILLSPSS Trigger: GCTGGAAGGTGACAATAAAATGGTGACAACTTTCAAAGGCATAAAGTCCGTGACTGAACTCAATGGAGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067492.8 |
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CDS CAA 90 bp | TTGGTGATTGTGTCTCCATTGAGTTCAGTCACGGACTTTATGCCTTaGAAAGTTGTCACCATTTTATTGTCACCTTCCAGCTTGACGACT | + |
Preference number: 6 (lower is better) Translates to: LVIVSPLSSVTDFMP*KVVTILLSPSSLTT Trigger: AGTCGTCAAGCTGGAAGGTGACAATAAAATGGTGACAACTTTCAAAGGCATAAAGTCCGTGACTGAACTCAATGGAGACACAATCACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067492.8 |